NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F091763

Metagenome Family F091763

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091763
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 100 residues
Representative Sequence ASSRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPAR
Number of Associated Samples 79
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 7.48 %
% of genes from short scaffolds (< 2000 bps) 6.54 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (92.523 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(26.168 % of family members)
Environment Ontology (ENVO) Unclassified
(62.617 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(64.486 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120
1JGI25384J37096_102137261
2JGI25382J37095_100723812
3JGI25390J43892_100604161
4JGI25386J43895_101046891
5JGI25386J43895_101463812
6JGI25387J43893_10091542
7JGI25387J43893_10634911
8Ga0066674_100025221
9Ga0066683_100485471
10Ga0066685_110642992
11Ga0070710_105436762
12Ga0070708_1005982531
13Ga0066686_100402091
14Ga0066686_110929941
15Ga0066687_109460291
16Ga0066697_100207701
17Ga0066697_108029861
18Ga0066698_111008001
19Ga0066670_106545871
20Ga0066693_103220022
21Ga0066691_100570933
22Ga0066651_100022461
23Ga0066651_108286731
24Ga0066656_107551141
25Ga0066653_104263541
26Ga0066660_102668782
27Ga0075434_1010377241
28Ga0075424_1000813333
29Ga0075436_1001094763
30Ga0075435_1001271761
31Ga0075435_1004533492
32Ga0099793_107182642
33Ga0099794_100476083
34Ga0066710_1035101721
35Ga0066710_1035256632
36Ga0066710_1046515631
37Ga0099828_109466521
38Ga0066709_1000320716
39Ga0066709_1018751782
40Ga0066709_1028520722
41Ga0099792_100779303
42Ga0134070_100652362
43Ga0134070_101869651
44Ga0134070_104709122
45Ga0134082_100225263
46Ga0134088_101910701
47Ga0134067_100231663
48Ga0134071_101457721
49Ga0134071_101643761
50Ga0134062_102563112
51Ga0134066_101266942
52Ga0134122_131133612
53Ga0137374_102980351
54Ga0137374_107209441
55Ga0137376_1000418310
56Ga0137376_102322491
57Ga0137376_112445611
58Ga0137386_100366311
59Ga0137386_107113111
60Ga0137367_101414473
61Ga0137369_101934301
62Ga0137371_104469303
63Ga0137385_100190596
64Ga0137385_110875592
65Ga0137360_103325061
66Ga0137390_103306721
67Ga0137390_115922062
68Ga0137396_103278922
69Ga0137416_114529081
70Ga0137410_100227124
71Ga0134077_101021392
72Ga0134076_103501811
73Ga0134087_104195772
74Ga0134087_104959682
75Ga0134075_100573401
76Ga0137409_102522093
77Ga0134069_13825982
78Ga0134069_13912351
79Ga0134112_104107181
80Ga0134083_102937372
81Ga0066655_110982742
82Ga0066655_113355712
83Ga0066667_100989911
84Ga0066669_106963402
85Ga0207684_104481311
86Ga0207684_112148792
87Ga0207646_108919241
88Ga0207664_101878173
89Ga0209350_10176961
90Ga0209238_12311011
91Ga0209647_12783352
92Ga0209152_101380112
93Ga0209375_12247171
94Ga0209375_12816552
95Ga0209377_12172881
96Ga0209806_12335571
97Ga0209058_10934481
98Ga0209058_11930201
99Ga0209058_12328541
100Ga0209058_12651642
101Ga0209161_100653221
102Ga0209161_105613412
103Ga0209588_10738261
104Ga0209590_100577993
105Ga0137415_112843391
106Ga0307278_100303013
107Ga0307479_116805611
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.66%    β-sheet: 22.83%    Coil/Unstructured: 68.50%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090ASSRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPARSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
7.5%92.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Vadose Zone Soil
Terrestrial Soil
Grasslands Soil
Soil
Grasslands Soil
Hardwood Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Populus Rhizosphere
24.3%17.8%26.2%18.7%4.7%4.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25384J37096_1021372613300002561Grasslands SoilTVRLSLVRGDTASSPRALDLVPEGPGSRVSFTLGRERSQFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGAPEPARVRCGRLDNVARRLALTGGDTLVASFGWPGAR*
JGI25382J37095_1007238123300002562Grasslands SoilLVRGDTASSRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPAR*
JGI25390J43892_1006041613300002911Grasslands SoilSSPHALDLVPESAGRRVSFTLGRQRSEFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGAAEPARVRCGRLDNVARRLALTGGDTLVATFGWPGAR*
JGI25386J43895_1010468913300002912Grasslands SoilGRRVSFKLGREKLDFDVGLERPEPPRTGRDSALAVAVDVVCLRVVAPEAAETPRVRCGRLDNIARRVALVSGDTLMATFGWPPAR*
JGI25386J43895_1014638123300002912Grasslands SoilPETAGRRVRFRLGRETLDLDVALERPDPPRTGRDSALAVAVDVVCLRVVAPESTGPRLRCGRLDDIARRVALTGGDTLMATFRWPVGR*
JGI25387J43893_100915423300002915Grasslands SoilVPEAPGRRVRFVLGGETFDFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGSSTPARVRCGRLDNVARRLALIEGDTLVATFAWPAVR*
JGI25387J43893_106349113300002915Grasslands SoilASSRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPAR*
Ga0066674_1000252213300005166SoilTASSPQVVDLVPETTGRRVSFRLGRERSDFDVSLDRPEPPRTGRDSALAVDADVVCLRVVTPDAATANARVRCGRLDNVARRVALTGGDTLMATFRWPAPR*
Ga0066683_1004854713300005172SoilSSPQVVDLVPETTGRRVSFRLGRERSDFDVSLDRPEPPRTGRDSALAVDADVVCLRVVTPDAATANARVRCGRLDNVARRVALTGGDTLMATFRWPAPR*
Ga0066685_1106429923300005180SoilTASSQRTVDFVPEAPGRRVSFVLGGETFDFDVTLERPEPPSTGRDSALAVDADVVCLRLLVPGSSGPARVRCGRLDNVARRLALVDGDTLVATFAWPAVR*
Ga0070710_1054367623300005437Corn, Switchgrass And Miscanthus RhizosphereRVTVRMSLVRGDTASTVRVVDLVPETTGRRVRFTLGGETFDFDVTLERPDPPRTGRDSALAVGVDMVCLRLVVPGSTEPARLRCGRPDNIARRVALTGGDTLVATFAWPAVR*
Ga0070708_10059825313300005445Corn, Switchgrass And Miscanthus RhizosphereSSQRTADLVPETTGQRVSFKLARETFDFDVALERPEPPRTGRDSALALAADVVCLRVVPPESAETARVRCGRLDNIARRVALVGGDTLMATFAWPPAR*
Ga0066686_1004020913300005446SoilVPEAPGRRVSFTLGAERAEFDVTLLRPEPPRTGRDSALATDADVVCLRLVVPGSADPAHVRCGRLDNVARRLALPGGDTVVATFAWPGAR*
Ga0066686_1109299413300005446SoilLSLVRGDTASSRQALDLVPETPGRRVRFALGRERSEFDVTLERPDPPGTGRDSALAVNADVVCLRVVVPVSAEPARVRCGRLDNIARRMALSGGDTLVATFAWPAAR*
Ga0066687_1094602913300005454SoilVSFVLGGETFDFDVTLERPEPPSTGRDSALAVDADVVCLRLLVPGSSGPARVRCGRLDNVARRLALVDGDTLVATFAWPAVR*
Ga0066697_1002077013300005540SoilVLDLVPETPGRRVRFALGRQRFEFDVTLERPDPPRTARDSALAAGAEVVCLRVVVPGPAEPARTRCGRLDNVARRVALAGGDTLVATFAWPALR*
Ga0066697_1080298613300005540SoilSSQRTVDFVPEAPGRRVSFVLGGETFDFDVTLERPEPPSTGRDSALAVDADVVCLRLLVPGSSGPARVRCGRLDNVARRLALVDGDTLVATFAWPAVR*
Ga0066698_1110080013300005558SoilVDLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAVAVDVVCLRVVVPESAGGPRVRCGRLDNIARRVALTGGDTLMATFRWPVGR*
Ga0066670_1065458713300005560SoilAPGRRVSFVLGGETFDFDVTLERPEPPSTGRDSALAVDADVVCLRLLVPGSSGPARVRCGRLDNVARRLALVDGDTLVATFAWPAVR*
Ga0066693_1032200223300005566SoilTVDFIPEAPGRRVSFVLGGETFDFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGSSGPARVRCGRLDNVARRLALVDGDTLVATFAWPAVR*
Ga0066691_1005709333300005586SoilAGRRVSFTLGRERSEFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGAAEPARVRCGRLDNVARRLALTGGDTLVATFGWPGAR*
Ga0066651_1000224613300006031SoilSSPRALDLIPEAPGRRVSFTLGGRTSAFDVTLQRPEPPRTGRDSALATDADVVCLRLLVPGSDEPARVRCGRLDNVARRLALSGGDTVVATFAWPGAR*
Ga0066651_1082867313300006031SoilRAIDLVPETPGRRVRFALGGETSELDVRLERPDPPRTGRDSALAVDADAVCLRVVVPGSTEPARIRCGRLDNVARQLALTGGDTLLATFAWPPAR*
Ga0066656_1075511413300006034SoilRGDTASSQRTVDFIPEAPGRRVSFVLGGETFDFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGSSGPARVRCGRLDNVARRLALVDGDTLVATFAWPAVR*
Ga0066653_1042635413300006791SoilVDLVPETPGRRVSFALGGEMSEFDVTLERPDPPRTGRDSALAVDADAVCLRVVAPGSMEPARVRCGRLDNVARQLALTGGDTLLATFAWPPAR*
Ga0066660_1026687823300006800SoilTVRMSLVRGDTASSLRAVDFVPEAPGRRVRFVLGGETFDFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGSSTPARVRCGRLDNVARRLALIEGDTLVATFAWPAVR*
Ga0075434_10103772413300006871Populus RhizosphereTVRMWLVRGDTASSRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPDPPRTGRDSALAVSVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPAR*
Ga0075424_10008133333300006904Populus RhizosphereGDTASSRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPAR*
Ga0075436_10010947633300006914Populus RhizosphereRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPDPPRTGRDSALAVSVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPAR*
Ga0075435_10012717613300007076Populus RhizosphereVRMWLVRGDTASSRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPAR*
Ga0075435_10045334923300007076Populus RhizosphereRGDTASSQRTVDFVPEAPGRRVSFVLGGETFDFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGSSGPTRVRCGRLDNVARRLALVDGDTLVATFAWPAVR*
Ga0099793_1071826423300007258Vadose Zone SoilDLVPETTGRRVSFRLGREKLDFDVALERSEPPGTGRDSALAVTMDAVCLRVVAPESPESARVRCGRLDDIARRVALVGGDTLMATFGWPPAR*
Ga0099794_1004760833300007265Vadose Zone SoilSGRRVSFVLGGETSEFDVTLERPEPPRSGRDSALAVDADAVCLRVLIPGGSGSAKLRCGRLNNVAHRLALIGGDTLVATFAWPAVR*
Ga0066710_10351017213300009012Grasslands SoilVIPPRRVTVRMLLVRGDTASSPQVVDLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAAAMDVVCLRVVVPESAAGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR
Ga0066710_10352566323300009012Grasslands SoilVIPPRRVTVRMLLVRGDTASSPQVVDLVPETDGRRVRFRLARETLDLDVALERPEPPRTGRDSALAAAVDVVCLRVVVPESAAGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR
Ga0066710_10465156313300009012Grasslands SoilRGDTASSPQVVDLVPETDGRRVRFRLGRETLDLDVALERPDPPRTGRDSALAVSVDVVCLRVVVPESAGGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR
Ga0099828_1094665213300009089Vadose Zone SoilPPRRVMVRMTLVRGDTASSQRAVDLVPETTGRRVSFQLGRETFDFDVALERPEPPRTGRDSALAVAMAVVCLRVIAPESPETARVRCGRLDNIARRVALVGGDTLMATFAWPPAR*
Ga0066709_10003207163300009137Grasslands SoilLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAVSVDVVCLRVVVPESAGGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR*
Ga0066709_10187517823300009137Grasslands SoilVIPPRRVTVRMLLVRGDTASSPQVVDLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAAAMDVVCLRVVVPESAAGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR*
Ga0066709_10285207223300009137Grasslands SoilVIPPRRVTVRMLLVRGDTASSPQVVDLVPETDGRRVRFRLARETLDLDVALERPEPPRTGRDSALAAAVDVVCLRVVVPESAAGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR*
Ga0099792_1007793033300009143Vadose Zone SoilMWLVRGDTASSRQAMDLVPETTGRRVSFRLGREKLDFDVALERTEAPRTGRDSALAVGVDVVCLRVVPPESAESARVRCGRLDDIARRVALVGGDTLMATFGWPPAR*
Ga0134070_1006523623300010301Grasslands SoilASSPRALDLVPEAPGRRVSFTLGAERAEFDVTLQRPEPPRTGRDSALAIDADVVCLRLVVPGSADPAQVRCGRLDNVARRLALPGGDTVVATFAWPGAR*
Ga0134070_1018696513300010301Grasslands SoilTASSPHALDLVPESAGRRVSFTLGRERSEFDVTLERPEPPRTGRDSALAVDADVVCLRVVTPDAATANARVRCGRLDNVARRVALTGGDTLMATFRWPAPR*
Ga0134070_1047091223300010301Grasslands SoilMLLVRGDTASSPQVVDLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAVSVDVVCLRVVVPESAGGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR*
Ga0134082_1002252633300010303Grasslands SoilLVRLALVRGDTASSQRAIDLVPETPGRRVRFALGGETSELDVRLERPDPPRTGRDSALAVDADAVCLRVVVPGSTEPARIRCGRLDNVARQLALTGGDTLLATFAWPPAR*
Ga0134088_1019107013300010304Grasslands SoilDTASSRQVLDLVPETSSRRVRFALGRERSEFDVTLERPDPPGTGRDSALAVNADVVCLRVVVPVSAEPARVRCGRLDNIARRMALSGGDTLVATFAWPAAR*
Ga0134067_1002316633300010321Grasslands SoilDLVPETAGRRVRFRLGRETLDLDVSLERPDPPRTGRDSALAVAVDVVCLRVVTAESTGPRLRCGRLDDIARRVSLTGGDTLMATFRWPPAR*
Ga0134071_1014577213300010336Grasslands SoilPRALDLVPDTPGRRVSFTLGRETSAFDVGLVRPEPARTGRDSALALGVDVVCLRVVLPDSATPAGERCGRLDNIARRLALAAGDTLVATFAWPPVR*
Ga0134071_1016437613300010336Grasslands SoilQAVIPPRRVTVRMTLVRGDTASSPQVVDLVPETTGRRVSFRLGRERSDFDVSLDRPEPPRTGRDSALAVDADVVCLRVVTPDAATANARVRCGRLDNVARRVALTGGDTLMATFRWPAPR
Ga0134062_1025631123300010337Grasslands SoilVVDLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAVSVDVVCLRVVVPESAGGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR*
Ga0134066_1012669423300010364Grasslands SoilETTGRRVSFRLGRERSDFDVSLDRPEPPRTGRDSALAVDADVVCLRVVTPDAATANARVRCGRLDNVARRVALTGGDTLMATFRWPAPR*
Ga0134122_1311336123300010400Terrestrial SoilVPETTGRRVSFQLGRETFDFDVALERPEPPRTGRDSALAIAMDVVCLRVIAPESPETARVRCGRLDNIARRVALVGGDTLMATFAWPPAR*
Ga0137374_1029803513300012204Vadose Zone SoilVRLSLVRGDTASSRQALDLVPETPGRRVRFALGRERSEFDVTLERPDPPRTGRDSALAVNAEVVCLRVVVPTSAAPARVRCGRLDNIARAMALSGGDTLVATFAWPAAR*
Ga0137374_1072094413300012204Vadose Zone SoilTTGRRVGFKLGREKLDFDVALERPEPPRTGRDSALALTVDLVCLRVAAPESAESPRVRCGRLDDIARRVALVGGDTLMATFGWPPAR*
Ga0137376_10004183103300012208Vadose Zone SoilLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAVAVDVVCLRVVVPESAGGPRVRCGRLDNIARRVALTGGDTLMATFRWPVGR*
Ga0137376_1023224913300012208Vadose Zone SoilQRTVDFVPEAPGRRVSFVLGGETFDFDVTLERPEPPSTGRDSALAVDADVVCLRLLVPGSSGPARVRCGRLDNVARRLALVDGDTLVATFAWPAVR*
Ga0137376_1124456113300012208Vadose Zone SoilRMWLVRGDTASSRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPAAR*
Ga0137386_1003663113300012351Vadose Zone SoilVPETPSRRVRFALGRERSEFDVTLERPEPPRTGRDSALAVDAEVVCLRLVASGSAEPARIRCGRLDNIARGVALTGGDTLVATFAWPAAR*
Ga0137386_1071131113300012351Vadose Zone SoilSPQVVDLVPETAGRRVRFRLGRETLDLDVALERPDPPRTGRDSALAVAVDVVCLRVVAPESTGPRLRCGRLDDIARRVALTGGDTLMATFRWPVGR*
Ga0137367_1014144733300012353Vadose Zone SoilPETPGRRVRFALGRERSEFDVTLERPDPPRTGRDSALAVNAEVVCLRVVVPTSAAPARVRCGRLDNIARAMALSGGDTLVATFAWPAAR*
Ga0137369_1019343013300012355Vadose Zone SoilQAVIPPRRVTVRMSLVRGDTASSPQVVDLVPETAGRRVRFRLGRETLDLDVALERPDPPRTGRDSALAVAVDVVCLRVVAPESAGAPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR*
Ga0137371_1044693033300012356Vadose Zone SoilRRVSFALGGEMSELDVTLERPDPPRTGRDSALAVDADAVCLRVLAPGSMEPARVRCGRLDNVARQLPLTGGDTLLATFVWPPVR*
Ga0137385_1001905963300012359Vadose Zone SoilVRMSLVRGDTASSQRTVDFVPEAQGRRVSFVLGGETFDFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGSSGPTRVRCGRLDNVARRLALVDGDTLVATFAWPAVR*
Ga0137385_1108755923300012359Vadose Zone SoilRVTVRMWLVRGDTASSRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPAR*
Ga0137360_1033250613300012361Vadose Zone SoilRRVTVRMWLVRGDTASSRQAMDLVPETTGRRVSFRLGREKLDFDVALERTEAPRTGRASALAVGVDVVCLRVVPPESAESARVRCGRLDDIARRVALVGGDTLMATFGWPPAR*
Ga0137390_1033067213300012363Vadose Zone SoilLVPETTGRRVSFRLGREKLDFDVALERTEAPRTGRDSALAVGVDVVCLRVVPPESAESARVRCGRLDDIARRVALVGGDTLMATFGWPPAR*
Ga0137390_1159220623300012363Vadose Zone SoilDLVPETTGRRVSFRLGREKLDFDVALERTEAPRTGRDSALAVGVDVVCLRVVAPESPETARVRCGRLDDIARRVALVGGDTLMATFGWPPAR*
Ga0137396_1032789223300012918Vadose Zone SoilWLVRGDTASSRQVVDLVPETTGRRVSFKLGRERLDFDVALERPEPPRSGRDSALAAAVDVVCLRVVAPESPETARVRCGRLDNIARRVALVGGDTLMATFGWPPAR*
Ga0137416_1145290813300012927Vadose Zone SoilLVPEAPGSRVRFALGRERFEFDVSLERPEPPRTGRDSALAIDADVVCLRLVLPGSADPARVRCGRLDNVARRLALTGGDTVVATFGWPAAR*
Ga0137410_1002271243300012944Vadose Zone SoilSSQRAVDLVPETTGRRVSFQLGRETFDFDVALERPEPPRTGRDSALAIAMDVVCLRVIAPESPETARVRCGRLDNIARRVALVGGDTLMATFAWPPAR*
Ga0134077_1010213923300012972Grasslands SoilLALVRGDTASSPRALDLVPDTPGRRVSFTLGRETSAFDVGLVRPEPARTGRDSALALGVDVVCLRVVLPDSATPAGERYGRLDNIARRLALAAGDTLVATFAWPPVR*
Ga0134076_1035018113300012976Grasslands SoilRGDTASSRQSVDLVPETTGRRVSFRLGREKLDFDVALERPAPPRTGRDSALAVAVDVVCLRVVPPESAETARIRCGRLDDIARRVALVSGDTLMATFAWPPAR*
Ga0134087_1041957723300012977Grasslands SoilVPEAPGRRVSFVLGGETFDFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGSSGPARVRCGRLDNVARRLALVDGDTLVATFAWPAVR*
Ga0134087_1049596823300012977Grasslands SoilMWLVRGDTASSRQSVDLVPETTGRRVSFRLGREKLDFDVALERPEPPRSGRDSALAAAVDVVCLRVVAPESSETARVRCGRLDDIARRVALVGGDTLMATFGWPPAR*
Ga0134075_1005734013300014154Grasslands SoilRQVVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPAAR*
Ga0137409_1025220933300015245Vadose Zone SoilPETTGRRVSFKLGRETFDFDVALERPEPPRTGRDSALAIAMDVVCLRVIAPESPETARVRCGRLDNIARRVALVGGDTLMATFAWPPAR*
Ga0134069_138259823300017654Grasslands SoilPRRVSVRMTLVRGDTASSPQVVDLVPETTGRRVSFRLGRERSDFDVSLDRPEPPRTGRDSALAVDADVVCLRVVTPDAATANARVRCGRLDNVARRVALTGGDTLMATFRWPAPR
Ga0134069_139123513300017654Grasslands SoilDLVPETPGRRVSFALGGEMSELDVRLERPDPPRTGRDSALAVDADAVCLRVLAPGSMEPARVRCGRLDNVARQLPLTGGDTLLATFVWPPVR
Ga0134112_1041071813300017656Grasslands SoilLIPETPGRRVSFTLGGRTSAFDVTLERPEPPRTGRDSALATDADVVCLRLLVPGSDEPARVRCGRLDNVARRLALSGGDTVVATFAWPGAR
Ga0134083_1029373723300017659Grasslands SoilVPEAPGSRVRFALGRERFEFDVSLERPEPPRTGRDSALAIDADVVCLRLVVPGSADPARVRCGRLDNVARRLALTGGDTVVATFGWPAAR
Ga0066655_1109827423300018431Grasslands SoilVTVRMLLVRGDTASSPQVVDLVPETAGRRVRFRLGRETLDLDVSLERPDPPRTGRDSALAVAVDVVCLRVVTAESTGPRLRCGRLDDIARRVALTGGDTLMATFRWPPAR
Ga0066655_1133557123300018431Grasslands SoilRMSLVRGDTASSPRVVDLVPETTGRRVRFTLGGETFDFDVTLERPDPPRTGRDSALAVGVDMVCLRLVVPGAAEPARLRCGRPDNIARRVALTGGDTLVATFAWPAVR
Ga0066667_1009899113300018433Grasslands SoilVIPPRRVTVRMLLVRGDTASSPQVVDLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAAAMDVVCLHVVVPESAAGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR
Ga0066669_1069634023300018482Grasslands SoilVLVRLSLVRGDTASSVRAVDLVPEAPGSRVRFALGRERFEFDVSLERPEPPRTGRDSALAIDADVVCLRLVVPGSADPARVRCGRLDNVARRLALTGGDTVVATFGWPAAR
Ga0207684_1044813113300025910Corn, Switchgrass And Miscanthus RhizosphereVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPAR
Ga0207684_1121487923300025910Corn, Switchgrass And Miscanthus RhizosphereAASTVRVVDLVPETTGRRVRFTLGGETFDFDVTLERPDPPRTGRDSALAVGVDMVCLRLVVPGSTEPARLRCGRPDNIARRVALTGGDTLVATFAWPAVR
Ga0207646_1089192413300025922Corn, Switchgrass And Miscanthus RhizosphereRRVRFTLGGETFDFDVTLERPDPPRTGRDSALAVGVDMVCLRLVVPGSTEPARLRCGRPDNIARRVALTGGDTLVATFAWPAVR
Ga0207664_1018781733300025929Agricultural SoilRVRFTLGGETFDFDVTLERPDPPRTGRDSALAVGVDMVCLRLVVPGSTEPARLRCGRPDNIARRVALTGGDTLVATFAWPAVR
Ga0209350_101769613300026277Grasslands SoilDLVPEAAGRRVSFTLGRERSEFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGAAEPARVRCGRLDNVARRLALTGGDTLVATFGWPGAR
Ga0209238_123110113300026301Grasslands SoilIPPRRVTVRMLLVRGDTASSPQVVDLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAVSVDVVCLRVVVPESAGGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR
Ga0209647_127833523300026319Grasslands SoilTLVRGDTASSQRAVDLVPETTGRRVSFKLGRETFDFDVALERPEPPRTGRDSALAAAMDVVCLRVVAPGSAETARVRCGRLDNIARRVALVGGDTLMATFAWPPAR
Ga0209152_1013801123300026325SoilDTASSPQVVDLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAVAVDVVCLRVVVPESAGGPRVRCGRLDNIARRVALTGGDTLMATFRWPVGR
Ga0209375_122471713300026329SoilASSRQSVDLVPETTGRRVSFRLGREKLDFDVALERPAPPRTGRDSALAVAVDVVCLRVVPPESAETARLRCGRLDDIARRVALVSGDTLMATFAWPPAR
Ga0209375_128165523300026329SoilRVLVRLALVRGDTASSQRAIDLVPETPGRRVRFALGGETSELDVRLERPDPPRTGRDSALAVDADAVCLRVVVPGSTEPARIRCGRLDNVARQLALTGGDTLLATFAWPPAR
Ga0209377_121728813300026334SoilSSQRTVDFVPEAPGRRVSFVLGGETFDFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGSSGPARVRCGRLDNVARRLALVEGDTLVATFAWPAVR
Ga0209806_123355713300026529SoilAVDLVPEAPGSRVRFALGRERFEFDVSLERPEPPRTGRDSALAIDADVVCLRLVVPGSADPARVRCGRLDNVARRLALTGGDTVVATFGWPAAR
Ga0209058_109344813300026536SoilSLVRGDTASSVRAVDLVPEAPGSRVRFALGRERFEFDVSLERPEPPRTGRDSALAIDADVVCLRLVVPGSADPARVRCGRLDNVARRLALTGGDTVVATFGWPAAR
Ga0209058_119302013300026536SoilETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAAAMDVVCLRVVVPESAAGPRVRCGRLDNIARRVALTGGDTLMATFRWPAAR
Ga0209058_123285413300026536SoilQVVDLVPETTGRRVSFRLGSEKLDFDVALERPEPPRTGRDSALAVAVDVVCLRVVPPESAEAARVRCGRLDDIARRVALVSGDTLMATFGWPPAR
Ga0209058_126516423300026536SoilVRGDTASSPQVVDLVPETDGRRVRFRLGRETLDLDVALERPEPPRTGRDSALAVAVDVVCLRVVVPESAGGPRVRCGRLDNIARRVALTGGDTLMATFRWPVGR
Ga0209161_1006532213300026548SoilPPRRVTVRMWLVRGDTASSRQSVDLVPETTGRRVSFRLGREKLDFDVALERPAPPRTGRDSALAVAVDVVCLRVVPPESAETARLRCGRLDDIARRVALVSGDTLMATFAWPPAR
Ga0209161_1056134123300026548SoilGDTASSRQVIDLVPETPGRRVSFRLGREKLDFDVALERPEPPRSGRDSALAAAVDVVCLRVVAPESSETARVRCGRLDDIARRVALVGGDTLMATFGWPPAR
Ga0209588_107382613300027671Vadose Zone SoilRMWLVRGDTASSRQAMDLVPETTGRRVSFRLGREKLDFDVALERTEAPRTGRDSALAVGVDVVCLRVVPPESAESARVRCGRLDDIARRVALVGGDTLMATFGWPPAR
Ga0209590_1005779933300027882Vadose Zone SoilRRVMVRMTLVRGDTASSQRAVDLVPETTGRRVSFKLGRETFDFDVALERPEPPRTGRDSALAVAMDVVCLRVIAPESPETARVRCGRLDNIARRVALVGGDTLMATFAWPPAR
Ga0137415_1128433913300028536Vadose Zone SoilSSRQVVDLVPETTGRRVSFKLGRERLDFDVALERPEPPRSGRDSALAAAVDVVCLRVVAPESPETARVRCGRLDNIARRVALVGGDTLMATFGWPPAR
Ga0307278_1003030133300028878SoilTASSQRAVDLVPETTGRRVSFSLGGEKFDFDVTLERPDPPRTGRDSALAVAVDVVCLRIVVPGSAEAARIRCGRLDNIARRVALTGGDTLMATFTWPPAR
Ga0307479_1168056113300031962Hardwood Forest SoilFVPEAPGRRVSFVLGGETFDFDVTLERPEPPRTGRDSALAVDADVVCLRLLVPGSSGPARVRCGRLDNVARRLALVEGDTLVATFAWPAVR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.