Metagenome Family F091755

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091755
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	54 residues
Representative Sequence	MPTDGQRIQKRTPATVALQVSSAKQPFITELAFTENVSLHGVRVVTERAWKPG
Number of Associated Samples	63
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	6.54 %
% of genes from short scaffolds (< 2000 bps)	5.61 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (90.654 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (68.224 % of family members)
Environment Ontology (ENVO)	Unclassified (61.682 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.224 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1FACENCE_2773540 2JGI25390J43892_100804811 3JGI25616J43925_100724712 4JGI25616J43925_101910952 5Ga0066674_101384865 6Ga0066673_106971862 7Ga0070730_100269044 8Ga0066691_104527911 9Ga0066691_108489632 10Ga0066653_106866292 11Ga0066665_114184031 12Ga0099791_100417831 13Ga0099793_101412431 14Ga0099793_101437022 15Ga0099794_100769713 16Ga0099794_106391052 17Ga0066710_1026197171 18Ga0099830_111885392 19Ga0099828_115615022 20Ga0099828_120219621 21Ga0099827_108579741 22Ga0134067_104329781 23Ga0134080_100928205 24Ga0137392_100570294 25Ga0137393_100777491 26Ga0137393_107915632 27Ga0137363_101691313 28Ga0137363_111184342 29Ga0137363_117156312 30Ga0137399_101880291 31Ga0137399_102309614 32Ga0137399_105799861 33Ga0137399_106717212 34Ga0137399_112365012 35Ga0137399_112408162 36Ga0137399_113604291 37Ga0137399_117146802 38Ga0137362_107112131 39Ga0137362_110488492 40Ga0137362_115633751 41Ga0137360_100931774 42Ga0137360_102485931 43Ga0137360_105977312 44Ga0137360_107392011 45Ga0137360_111749211 46Ga0137360_118641122 47Ga0137361_103398312 48Ga0137361_108046211 49Ga0137361_115377731 50Ga0137390_100761151 51Ga0137395_100031931 52Ga0137395_106109311 53Ga0137395_107264492 54Ga0137396_102419822 55Ga0137396_106817951 56Ga0137394_101827204 57Ga0137394_113792272 58Ga0137419_100934904 59Ga0137419_101274413 60Ga0137419_102346842 61Ga0137419_104316921 62Ga0137419_104856931 63Ga0137419_111758451 64Ga0137419_114994971 65Ga0137416_101258041 66Ga0137416_101998303 67Ga0137416_109163773 68Ga0137416_112105301 69Ga0137407_110842961 70Ga0137407_118522341 71Ga0137410_118935903 72Ga0134087_103192511 73Ga0137411_12192191 74Ga0137405_12298771 75Ga0137420_14600942 76Ga0137420_14623943 77Ga0137418_1001492710 78Ga0137412_111722661 79Ga0137403_100729881 80Ga0137403_101271291 81Ga0066667_119719791 82Ga0179592_102509321 83Ga0210403_101491945 84Ga0210399_1000327014 85Ga0210405_112340141 86Ga0210396_100009023 87Ga0137417_10901631 88Ga0137417_12169791 89Ga0209438_11375071 90Ga0209240_10167165 91Ga0209240_12686271 92Ga0209240_12974031 93Ga0209470_13801321 94Ga0209267_11652351 95Ga0257154_10368271 96Ga0257157_10334831 97Ga0257161_10570521 98Ga0209056_102851812 99Ga0208983_10721581 100Ga0209076_10363382 101Ga0209076_11690281 102Ga0209588_12441441 103Ga0209166_100327904 104Ga0209488_105846661 105Ga0137415_103459092 106Ga0170824_1191087872 107Ga0307479_115344742
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1FACENCE_2773540 2JGI25390J43892_100804811 3JGI25616J43925_100724712 4Ga0066674_101384865 5Ga0070730_100269044 6Ga0066691_104527911 7Ga0066653_106866292 8Ga0066665_114184031 9Ga0134067_104329781 10Ga0137393_107915632 11Ga0137399_117146802 12Ga0137395_100031931 13Ga0137405_12298771 14Ga0137420_14600942 15Ga0210403_101491945 16Ga0210399_1000327014 17Ga0210396_100009023 18Ga0209056_102851812 19Ga0307479_115344742
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52. 1Ga0137399_113604291 2FACENCE_2773540 3JGI25616J43925_100724712 4Ga0066673_106971862 5Ga0066691_104527911 6Ga0066653_106866292 7Ga0099793_101437022 8Ga0137363_111184342 9Ga0137399_117146802 10Ga0137360_111749211 11Ga0137395_100031931 12Ga0137396_106817951 13Ga0137411_12192191 14Ga0137420_14600942 15Ga0066667_119719791 16Ga0210399_1000327014 17Ga0210396_100009023 18Ga0209056_102851812 19Ga0209166_100327904 20Ga0170824_1191087872
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 17.28% Coil/Unstructured: 82.72%
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF07238	PilZ	4.67
PF01381	HTH_3	3.74
PF02687	FtsX	2.80
PF00072	Response_reg	1.87
PF12146	Hydrolase_4	1.87
PF07730	HisKA_3	1.87
PF02353	CMAS	1.87
PF00561	Abhydrolase_1	0.93
PF12697	Abhydrolase_6	0.93
PF01255	Prenyltransf	0.93

Showing 1 to 10 of 20 entries

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COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.87
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	1.87
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	1.87
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.87
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.87
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.87
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.87
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.93
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.93
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	9.35 %
Unclassified	root	N/A	90.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	9.35 %
Unclassified	root	N/A	90.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.35 %
Unclassified	root	N/A	90.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.35 %
Unclassified	root	N/A	90.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.61 %
Unclassified	root	N/A	90.65 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005537\|Ga0070730_10026904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4385	Open in IMG/M
3300007258\|Ga0099793_10141243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300012202\|Ga0137363_11118434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300012203\|Ga0137399_10671721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300020580\|Ga0210403_10149194	All Organisms → cellular organisms → Bacteria → Acidobacteria	1912	Open in IMG/M
3300020581\|Ga0210399_10003270	All Organisms → cellular organisms → Bacteria → Acidobacteria	12623	Open in IMG/M
3300026285\|Ga0209438_1137507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300026304\|Ga0209240_1016716	All Organisms → cellular organisms → Bacteria → Acidobacteria	2798	Open in IMG/M
3300026467\|Ga0257154_1036827	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300027857\|Ga0209166_10032790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3147	Open in IMG/M

Showing 1 to 10 of 10 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	1.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	98.13%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	73.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	68.22%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M

Showing 1 to 10 of 63 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_2773540	2040502001	Soil	MSTDSQRIQKRTPATVALQISSANQPLVAELVFTENISLHGVRAVTARAWNP
JGI25390J43892_100804811	3300002911	Grasslands Soil	MPTDGRRIQKRTPASVALQVSSAKQPFITELAFTENVSLHGVRVGW
JGI25616J43925_100724712	3300002917	Grasslands Soil	MPTDRQRIQKRTHASVALQISSAEQPFITELAFSENVSLHGVRVVTERAWKPGERVIVKSYHGSIKSPAKVIYCYR
JGI25616J43925_101910952	3300002917	Grasslands Soil	MPTDGQRIQKRIPASVALQVSSATQPFITELAFAENVSLHGVRVVTERAWKPGE
Ga0066674_101384865	3300005166	Soil	MPTDCKRIQKRTPATVALQVSSATQPFITELVFTENFSLHGVRVVTVRAWKPGERVI
Ga0066673_106971862	3300005175	Soil	MPTDCKRIQKRTPATVALQVSSATQPFITELVFTENFSLHGVRVVTVRAWKPGERVIVKSYHGSIQSRARVIYCH
Ga0070730_100269044	3300005537	Surface Soil	MPTDCKRIQKRTPATVALQITNANQPFISQLAFTENVSLHGVRVVTERRGNQERA*
Ga0066691_104527911	3300005586	Soil	MPTDCKRIQKRTPATVALQITSVNQPFITELAFTENVSLHGVRALTERVWKPGERVIVKSYHGSIQS
Ga0066691_108489632	3300005586	Soil	MPTDGQRFQKRTPATVSLQVSSAEQPFITELAFTENVSLH
Ga0066653_106866292	3300006791	Soil	MPTDGQRFQKRTPATVSLQVSSAAQPFTTELAFTENVSLHGVRVVTGRAWKRAERLIVKSYNGSVQSR
Ga0066665_114184031	3300006796	Soil	MPSDCKRIQKRTTASVALQISSARQPFITELAFTENVSL
Ga0099791_100417831	3300007255	Vadose Zone Soil	MPTDAQRIQKRTPATVALQVSSAKQPFITELAFTENVSLHGVRVVTERAWKP
Ga0099793_101412431	3300007258	Vadose Zone Soil	MPTDAQRIQKRTPATVALQVSSANQPFITELAFTENVSLHGVRVVTERAWKPGERVIVKS
Ga0099793_101437022	3300007258	Vadose Zone Soil	MPTDGQRIQKRNTATVALQVSSAKQPLITELVFTENISLHGVRVVTQRVWNPGERVIVKSYHGSIQS
Ga0099794_100769713	3300007265	Vadose Zone Soil	MPTDGQRIQKRIPASVALQVSSATQPFITELAFAENVSLHGVRVVTERAWKPGERV
Ga0099794_106391052	3300007265	Vadose Zone Soil	MPTDTQRIQKRTPATVALQVSSAKQPFITELAFTENVSLHGVRVVTERAWKPGERVIVKS
Ga0066710_1026197171	3300009012	Grasslands Soil	MPTDAQRIQKRTPATVALQVSSANQPFITELAFTENVSLHGVRVVTERAWKPGER
Ga0099830_111885392	3300009088	Vadose Zone Soil	MPTDGQRIQKRIPASVALQVSSATQPFITELAFAENVSLHGVRVVTERAWKPGERVIVKS
Ga0099828_115615022	3300009089	Vadose Zone Soil	MPTDGQRIQKRIPASVALQVSSATQPFITELAFAENVSLHGVRVVTERAWKPGER
Ga0099828_120219621	3300009089	Vadose Zone Soil	MPTDGQRIQKRTPATVALQISSAKQPFITELAFTENFSLHGVRVVTGRAWKPGERVIVKSYHGSIQSRARVIYCHHLAE
Ga0099827_108579741	3300009090	Vadose Zone Soil	MPTDCKRIQKRTPTTVALQITSAGQPFITELAFTENVSLHGVRAVTERAWKP
Ga0134067_104329781	3300010321	Grasslands Soil	MPSDRQRNQKRTPAAVALQVSSAAQPFITELAFTEN
Ga0134080_100928205	3300010333	Grasslands Soil	MPTDCKRIQKRTPATVALQVSSATQPFITELAFTENVSLHGVRVVTERAWKPVERVIVKSYHG
Ga0137392_100570294	3300011269	Vadose Zone Soil	MPTDRQRIQKRTHASVALQISSAEQPFITELAFSENVSLHGVRVVTERAWK
Ga0137393_100777491	3300011271	Vadose Zone Soil	MPTDGQRIQKRIPASVALQVSSATQPFITELAFAENVSLHGVRVVTERAWKPGERVIVKSYHGSIQSRARVIYCHHL
Ga0137393_107915632	3300011271	Vadose Zone Soil	VALQIISAKQPFITELAFAENVSLHGVRAVTERAWKPGERVIVKSYHGSIQSAAKVIYCHRLAEARYAVGLE
Ga0137363_101691313	3300012202	Vadose Zone Soil	MPTDCKRIQKRTPASVALQITSARQPFITELAFTENVSLHGVRAVTERAWK
Ga0137363_111184342	3300012202	Vadose Zone Soil	MSNEEKRIQKRTPATVALQISSAKQPFITELVFTENLSLHGVRVVTERAWQPGERVVVTS
Ga0137363_117156312	3300012202	Vadose Zone Soil	MPTDAQRIQKRTPATVALQVSSANQPFITELAFTENVSLHGVRVVTGRAWKPGERVIVKSYHGSIQSRA
Ga0137399_101880291	3300012203	Vadose Zone Soil	MPTDAQRIQKRTPATVALQVSSATQPFITELAFTENVSLHGVRV
Ga0137399_102309614	3300012203	Vadose Zone Soil	MPADTQRIQKRTPATVALQVSSAKQPFITELAFTENVSLHGVRVV
Ga0137399_105799861	3300012203	Vadose Zone Soil	MPTDGQRIQKRSPATVALQISSEKQPFITELAFTENVSLHGVRVVTERAWKSGERVIVRS
Ga0137399_106717212	3300012203	Vadose Zone Soil	MPTDGQRIQKRAPATVALQVSSAKQPFITELAFTENVSLHGVRVV
Ga0137399_112365012	3300012203	Vadose Zone Soil	MPTDAQRIQKRTPATVALQVSSATQPFITELAFTEN
Ga0137399_112408162	3300012203	Vadose Zone Soil	MPTDCKRIQKRTPATVALQVSSATRPFITELVFTENFSLHGVRVVTVR
Ga0137399_113604291	3300012203	Vadose Zone Soil	MPTDGQRIQKRTPATVALQVSSAKQPFITELAFTENVSLHGVRVVTERAWKPG
Ga0137399_117146802	3300012203	Vadose Zone Soil	VPTEQRTQKRTPATVALQVSSATRPFITELVFTENFSLHGVRVVTVR
Ga0137362_107112131	3300012205	Vadose Zone Soil	MPNDGKRIQKRTPATVALQISSAKQPFITELAFTENFSLHGVRVVTER
Ga0137362_110488492	3300012205	Vadose Zone Soil	MPIDCKRIQKRTPATVALQVSSATQPFITELAFAENVSLHGVRVVTERAWKPG
Ga0137362_115633751	3300012205	Vadose Zone Soil	MPTDGQRIQKRTPASVALQVSSATQPFITELAFAENVSLHGVRVVTE
Ga0137360_100931774	3300012361	Vadose Zone Soil	MPTDCKRIQKRTPATVALQITSAKQPFITELAFTEN
Ga0137360_102485931	3300012361	Vadose Zone Soil	MPTDCKRIQKRTPATVALQITSANQPFITELAFTENVSLHGVRALTE
Ga0137360_105977312	3300012361	Vadose Zone Soil	MPTDAQRIQKRTPATVALQVSSAKQPFITELAFTENVSLHGVRVVTERAWKPGERVIVKSYHG
Ga0137360_107392011	3300012361	Vadose Zone Soil	MPTDGKRIQKRAPATVALQVSSAKQPFITELAFTENVSLHGVRVVTGRVWKPGERVIVKSYHG
Ga0137360_111749211	3300012361	Vadose Zone Soil	MPPECQRIQKRTSATVALQISSANQPLIAELVFTENLSLHGVRAVTGRAW
Ga0137360_118641122	3300012361	Vadose Zone Soil	MPTDGQRFQKRTPATVSLQVSSAEQPFITELAFAENVSLHGVRVVTERAWK
Ga0137361_103398312	3300012362	Vadose Zone Soil	MLTDGQRIQKRTPATVALQVSSAKQSFITELAFTENV
Ga0137361_108046211	3300012362	Vadose Zone Soil	MPTDSQRIQKRTPATVFLQISSANQPFIAELAFTENISLHGVRAVTARAWNPGDRVLLKSYHGSIQSWA
Ga0137361_115377731	3300012362	Vadose Zone Soil	MSTDGQRIQKRTPATVALQISSAKQPFITELAFTENFSLHGV
Ga0137390_100761151	3300012363	Vadose Zone Soil	MPTDGQRIQKRTPATVALQISSANQPFIAELAFTENISLHGVRVVTERA
Ga0137395_100031931	3300012917	Vadose Zone Soil	MTTDCKRIQKRTPTTVALQVTSVRQPLITELAFTENVSLHGV
Ga0137395_106109311	3300012917	Vadose Zone Soil	MPTDGQRIQKRIPASVALQVSSATQPFITELAFAENVSLHGVR
Ga0137395_107264492	3300012917	Vadose Zone Soil	MPTDCKRIQKRTPTTVALQVTSVRQPLITELAFTENVSLHGV
Ga0137396_102419822	3300012918	Vadose Zone Soil	MPTDTQRIQKRTPANVALQVSSAKQPFITELAFTENVSLHGIRVVTERAWKPGERAIVKSYHGSIQSRAG*
Ga0137396_106817951	3300012918	Vadose Zone Soil	MPSDTQRIQKRTPATVFLQISSANQPFIAELAFTENISLHGVRAVTARAWNPGERVLLKSYHGSI*
Ga0137394_101827204	3300012922	Vadose Zone Soil	MPTDRQRIQKRTPATVALQVSSAKQPFITELAFTENVSLHGVRVV
Ga0137394_113792272	3300012922	Vadose Zone Soil	MPTDCKRIQKRTPATVALQITSAKQPFITELAFTENFSLHGVRVVTERAWKPGERVIIKSYHGSV
Ga0137419_100934904	3300012925	Vadose Zone Soil	MPSDTQRIQKRTPATVFLQISSANQPFIAELAFTEN
Ga0137419_101274413	3300012925	Vadose Zone Soil	MPTDRQRIQKRTPATVALQVSSAKQPFITELAFTENVSLHGVRVVTERAWKPGERVTVK
Ga0137419_102346842	3300012925	Vadose Zone Soil	MPTDCKRIQKRTPATVALQITSAKQPFITELAFTENFSLHGVRVVTERAWKPGE
Ga0137419_104316921	3300012925	Vadose Zone Soil	MPADTQRIQKRTPATVALQVSSAKQPFITELAFTEN
Ga0137419_104856931	3300012925	Vadose Zone Soil	MPTDGQRIQKRIPASVALQVSSATQPFITELAFAENV
Ga0137419_111758451	3300012925	Vadose Zone Soil	MPTDGQRIQKRTPATVALQVSSATQPFITELAFAENVSLHGVRVVTERV
Ga0137419_114994971	3300012925	Vadose Zone Soil	MPTDGQRIQKRTPATVALQVSSAKQPFVTELAFTENVSLHGVR
Ga0137416_101258041	3300012927	Vadose Zone Soil	MPTDGQRIQKRIPASVALQVSSATQPFITELAFAENVSLHG
Ga0137416_101998303	3300012927	Vadose Zone Soil	MPTDAQRIQKRTPATVALQVSSATQPFITELAFTENV
Ga0137416_109163773	3300012927	Vadose Zone Soil	MPTDGQRIQKRTPATVALQVSNAKQPFITELAFTENVSLHGVRVVTE
Ga0137416_112105301	3300012927	Vadose Zone Soil	MPTDGQRIQKRTPATVALQVSSATQPFITELAFAENVSLHGVRVVTERAWKPGERVI
Ga0137407_110842961	3300012930	Vadose Zone Soil	MPTDGQRIQNRSPATVALQISSEKQPFITELAFTENVSLHGVRVVTERAWK
Ga0137407_118522341	3300012930	Vadose Zone Soil	MPTDCKRIQKRTPATVALQITSAKQPFITELAFTENVSLHGVRVVTERAWKPGERVIIKS
Ga0137410_118935903	3300012944	Vadose Zone Soil	MPTDGQRIQKRSPATVALQISSEKQPFITELAFTENVSLHGVRVVTERAWKSGERVIV
Ga0134087_103192511	3300012977	Grasslands Soil	MPTDCKRIQKRTPATVALQVSSATQPFITELAFTENV
Ga0137411_12192191	3300015052	Vadose Zone Soil	MPTDCKRIQKRTAATVALQITSGKQPFITELAFTENVSLHLNNA*
Ga0137405_12298771	3300015053	Vadose Zone Soil	MPTDAQRIQKRTPATVALQVSSAKQPFITELAFTENVSLHGVRVVTERAWKPGERVIVKSYHGSVIVKSYHGSIQSRA
Ga0137420_14600942	3300015054	Vadose Zone Soil	MPTDARESEADPATVALQVSSATQPFITELAFTENVSLHGVRL*
Ga0137420_14623943	3300015054	Vadose Zone Soil	MPTDRQRIQKRTPATVALQVSSAKQPFITELAFTENVSLHGVRVVTQRAGNRESA*
Ga0137418_1001492710	3300015241	Vadose Zone Soil	MPTDSQRIQKRTPATVFLQISSANQPFIAELAFTENISLHGVRAVTARAWNPGDRVLLKSYHGSIQSWAKVIYCQEL
Ga0137412_111722661	3300015242	Vadose Zone Soil	MPTDSQRIQKRTPATVFLQISSANQPFIAELAFTENISLHGVRAVTARAWNPGDR
Ga0137403_100729881	3300015264	Vadose Zone Soil	MPTDAQRIQKRTPATVALQVSSANQPFITELAFTENVSLHGVRVVTERAWKPGERVIVK
Ga0137403_101271291	3300015264	Vadose Zone Soil	MPTHGQRFQKRTPATVSLQVSSAEQPFITELAFTENVSLHGVRVVTERA
Ga0066667_119719791	3300018433	Grasslands Soil	MPTEQRTQKRTPATVALQVSSAKQPLITELAFTENVSLRGVRVVTVRAWKPGEH
Ga0179592_102509321	3300020199	Vadose Zone Soil	MPTDGQRIQKRTPATVALQVSSATQPFITELAFAENVSLHGVRIVTERAWKPGERVIVKSYHGSIQSR
Ga0210403_101491945	3300020580	Soil	MPTDGTRIQKRTPATVALQISSAKQPFITELPFSENLS
Ga0210399_1000327014	3300020581	Soil	MPTERIQKRSPATVALQISSAKQPLITELAFTENLSLHGVRLVTGRVCGSQGSA
Ga0210405_112340141	3300021171	Soil	MPTDCKRIQKRTPATVALQITSAKQPFISELAFTENVSLHGVRVVTERAWKPGERVIVKSYH
Ga0210396_100009023	3300021180	Soil	MPTERIQKRSPVTVALQISSAKQPFITELAFTENLSLHGVRLVTGRPWEPGKRVVVKSYHGSIQSRANVICHTPHTHKDSRATRHIRY
Ga0137417_10901631	3300024330	Vadose Zone Soil	MPTDCKRIQKRTTATVALQITSAKQPFITELAFTENVSLHGVR
Ga0137417_12169791	3300024330	Vadose Zone Soil	MPTDCKRIQKRTPASVALQITSAQQPFITELAFTENVSLHGVRAVTERAWKPGE
Ga0209438_11375071	3300026285	Grasslands Soil	MPTDGQRIQKRTPTTVALQVSSANQPFITELAFTENVSLHGVRVVTERAWKPGERVIVKSYH
Ga0209240_10167165	3300026304	Grasslands Soil	MPTDGKRIQKRTPATVALQISSANQPFITELAFTENVSLH
Ga0209240_12686271	3300026304	Grasslands Soil	MPTDGQRIQKRTPATVALQISSAKQPFITELAFTENFSLHGVRVVTGRAWKPRE
Ga0209240_12974031	3300026304	Grasslands Soil	MPTDCKRIQKRTPATVALQVSSATQPFITELVFTENFSLHGVRVVTVRAWKPGERVIVKSYHGSIQSRARVIYCHH
Ga0209470_13801321	3300026324	Soil	MPTEQRTQKRTPATVALQVSSAKQPLITELAFTENVSLRGVRVVTVRAWKPGEHVIV
Ga0209267_11652351	3300026331	Soil	MPTDCKRIQKRTPATVALQVSSATQPFITELAFTENVSLHGVRVVTERAWKPGERVIVKSYHGSIQSR
Ga0257154_10368271	3300026467	Soil	MPTERIQKRSPATVALQISSAKQPLITELAFTENLSLHGVRLVTGRAWEPGERVVV
Ga0257157_10334831	3300026496	Soil	MPTDRQRIQKRTHASVALQISSAEQPFITELAFSENVSLHGVRVVTERAWKPG
Ga0257161_10570521	3300026508	Soil	MPTDRQRIQKRSPATVALQVSSAKQPFITELAFTENFSLHGVRVVTERAWKPGERVIIKSYH
Ga0209056_102851812	3300026538	Soil	MPTDCKRIQKRTPATVALQVTSAKQPFIAELAFTENVSLHGVRSVRGNQESA
Ga0208983_10721581	3300027381	Forest Soil	MPTDGQRIQKRAPATVALQVSSAKQPFITELAFTENISLHGVRVVTE
Ga0209076_10363382	3300027643	Vadose Zone Soil	MPTDRQRIQKRTHASVALQISSAEQPFITELAFSENVSLHGVRVVTERTWKPGERVIVKSYYGSIQ
Ga0209076_11690281	3300027643	Vadose Zone Soil	MPTDTQRIQKRTPANVAVQVSSAKQPFITELAFTENV
Ga0209588_12441441	3300027671	Vadose Zone Soil	MPTDCKRIQKRTPATVALQVSSATRPFITELVFTENFSLH
Ga0209166_100327904	3300027857	Surface Soil	MPTDCKRIQKRTPATVALQITNANQPFISQLAFTENVSLHGVRVVTERRGNQERA
Ga0209488_105846661	3300027903	Vadose Zone Soil	MPTDGQRFQKRTPATVSLQVSSAEQPFITELAFTENVSLHGVRVVTE
Ga0137415_103459092	3300028536	Vadose Zone Soil	MPTDGQRIQKRTPATVALQVSSATQPFITELAFAENVSLHGVRVVTE
Ga0170824_1191087872	3300031231	Forest Soil	MPPDCQRIQERSPAAVARQISSASQPLIAELVFTGNLSLHGVRAVTGRAWNP
Ga0307479_115344742	3300031962	Hardwood Forest Soil	MSTDTQRIQKRTPATVALQISSANQLFIAELVFTENISLHGVRAVTARAWNPGERVLLKSYHGNIQSWAKVIYC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters