Metagenome Family F091744

Basic Information
Family ID	F091744
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	45 residues
Representative Sequence	MAEMTIRRFGVLSVAKMYGLLMFIFGLIIGVIYGLFFILFGAAMS
Number of Associated Samples	95
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	86.92 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Bacteria (91.589 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (14.953 % of family members)
Environment Ontology (ENVO)	Unclassified (37.383 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.944 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.90% β-sheet: 0.00% Coil/Unstructured: 41.10%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF03309	Pan_kinase	11.21
PF00201	UDPGT	5.61
PF08811	DUF1800	0.93
PF04101	Glyco_tran_28_C	0.93
PF09413	DUF2007	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1521	Pantothenate kinase type III	Coenzyme transport and metabolism [H]	11.21
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	11.21
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.59 %
Unclassified	root	N/A	8.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.59 %
Unclassified	root	N/A	8.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.59 %
Unclassified	root	N/A	8.41 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	58.88 %
Unclassified	root	N/A	8.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.17 %
Unclassified	root	N/A	8.41 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	5.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.17 %
Unclassified	root	N/A	8.41 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	5.61 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.17 %
Unclassified	root	N/A	8.41 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	5.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.17 %
Unclassified	root	N/A	8.41 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	5.61 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.17 %
Unclassified	root	N/A	8.41 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	5.61 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_49540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300000955\|JGI1027J12803_104771320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300000955\|JGI1027J12803_107177378	Not Available	528	Open in IMG/M
3300002120\|C687J26616_10005707	All Organisms → cellular organisms → Bacteria	5096	Open in IMG/M
3300002886\|JGI25612J43240_1039125	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300004114\|Ga0062593_100570631	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300004114\|Ga0062593_101006209	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300004463\|Ga0063356_103454901	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005093\|Ga0062594_100953948	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300005176\|Ga0066679_11061682	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005290\|Ga0065712_10777902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300005334\|Ga0068869_100061667	All Organisms → cellular organisms → Bacteria	2751	Open in IMG/M
3300005340\|Ga0070689_101681358	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005406\|Ga0070703_10136692	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300005440\|Ga0070705_100190573	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300005440\|Ga0070705_100584401	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300005444\|Ga0070694_100114802	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300005444\|Ga0070694_100818949	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300005444\|Ga0070694_101571480	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005445\|Ga0070708_100698142	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005445\|Ga0070708_101438524	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300005458\|Ga0070681_10160421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2172	Open in IMG/M
3300005467\|Ga0070706_100640385	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005468\|Ga0070707_100849887	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300005518\|Ga0070699_100011157	All Organisms → cellular organisms → Bacteria → Proteobacteria	7766	Open in IMG/M
3300005536\|Ga0070697_101197966	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005545\|Ga0070695_100367091	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300005545\|Ga0070695_100741288	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300005546\|Ga0070696_100129015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1838	Open in IMG/M
3300005548\|Ga0070665_100420341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1345	Open in IMG/M
3300005549\|Ga0070704_101313726	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005564\|Ga0070664_101885907	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005568\|Ga0066703_10634590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300005574\|Ga0066694_10312007	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300005575\|Ga0066702_10509160	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300005577\|Ga0068857_101271301	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005578\|Ga0068854_101866574	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300005616\|Ga0068852_102238936	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005617\|Ga0068859_101193681	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300005719\|Ga0068861_101323626	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300006794\|Ga0066658_10103517	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300006806\|Ga0079220_10341758	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300006904\|Ga0075424_102546258	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300006914\|Ga0075436_101008667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300007004\|Ga0079218_11967123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300007255\|Ga0099791_10667509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009036\|Ga0105244_10386875	Not Available	644	Open in IMG/M
3300009036\|Ga0105244_10487029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300009098\|Ga0105245_10393018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1384	Open in IMG/M
3300009148\|Ga0105243_12424131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300009156\|Ga0111538_12271062	Not Available	681	Open in IMG/M
3300009156\|Ga0111538_12797111	Not Available	611	Open in IMG/M
3300009174\|Ga0105241_12432335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300009176\|Ga0105242_10335754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1391	Open in IMG/M
3300009789\|Ga0126307_10659082	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300010159\|Ga0099796_10502153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300010396\|Ga0134126_12890741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300010397\|Ga0134124_10141413	All Organisms → cellular organisms → Bacteria	2137	Open in IMG/M
3300010401\|Ga0134121_12224003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300010403\|Ga0134123_13463562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300011417\|Ga0137326_1123363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300011444\|Ga0137463_1251849	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300011993\|Ga0120182_1013022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300012203\|Ga0137399_10186562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1677	Open in IMG/M
3300012353\|Ga0137367_11168494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300012354\|Ga0137366_10523572	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300012357\|Ga0137384_10112371	All Organisms → cellular organisms → Bacteria	2275	Open in IMG/M
3300012363\|Ga0137390_10122305	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300012685\|Ga0137397_11043488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300012922\|Ga0137394_11591968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300012923\|Ga0137359_10531607	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300012961\|Ga0164302_11292137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300012986\|Ga0164304_10410277	All Organisms → cellular organisms → Bacteria → Acidobacteria	965	Open in IMG/M
3300012986\|Ga0164304_11533377	Not Available	552	Open in IMG/M
3300015372\|Ga0132256_100990624	All Organisms → cellular organisms → Bacteria → Acidobacteria	956	Open in IMG/M
3300015374\|Ga0132255_100987573	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300018056\|Ga0184623_10449427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300018059\|Ga0184615_10212595	All Organisms → cellular organisms → Bacteria → Acidobacteria	1087	Open in IMG/M
3300018422\|Ga0190265_13450220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300018432\|Ga0190275_10975277	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300018476\|Ga0190274_10845734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	977	Open in IMG/M
3300020006\|Ga0193735_1019432	All Organisms → cellular organisms → Bacteria → Acidobacteria	2109	Open in IMG/M
3300025315\|Ga0207697_10176726	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300025913\|Ga0207695_11419569	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300025917\|Ga0207660_11374863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300025934\|Ga0207686_10070305	All Organisms → cellular organisms → Bacteria	2249	Open in IMG/M
3300025960\|Ga0207651_10683519	All Organisms → cellular organisms → Bacteria → Acidobacteria	903	Open in IMG/M
3300025971\|Ga0210102_1049047	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300026035\|Ga0207703_10658137	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300026118\|Ga0207675_100195452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1942	Open in IMG/M
3300026285\|Ga0209438_1021171	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2171	Open in IMG/M
3300026332\|Ga0209803_1329935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300027731\|Ga0209592_1159995	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300028380\|Ga0268265_10536479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1108	Open in IMG/M
3300028380\|Ga0268265_10672837	All Organisms → cellular organisms → Bacteria → Acidobacteria	997	Open in IMG/M
3300031538\|Ga0310888_11108889	Not Available	501	Open in IMG/M
3300031716\|Ga0310813_11785720	Not Available	577	Open in IMG/M
3300031740\|Ga0307468_100904075	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300031908\|Ga0310900_10912313	Not Available	717	Open in IMG/M
3300031911\|Ga0307412_11941632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300031995\|Ga0307409_102057478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300032003\|Ga0310897_10315064	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300033513\|Ga0316628_100095703	All Organisms → cellular organisms → Bacteria	3310	Open in IMG/M
3300034165\|Ga0364942_0006747	All Organisms → cellular organisms → Bacteria → Acidobacteria	3495	Open in IMG/M
3300034165\|Ga0364942_0009754	All Organisms → cellular organisms → Bacteria → Acidobacteria	2970	Open in IMG/M
3300034818\|Ga0373950_0082884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.16%
Host-Associated	Host-Associated	30.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.55%
Plants	Host-Associated → Plants	30.84%
Aquatic	Environmental → Aquatic	5.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.08%
Sediment	Environmental → Aquatic → Sediment	3.74%
Floodplain	Environmental → Terrestrial → Floodplain	1.87%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Marine	Environmental → Aquatic → Marine	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.06%
Loam	Environmental → Terrestrial → Soil → Loam	18.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300011993	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep1	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00528700	2199352025	Soil	MAEMTIRRFGVFSVAKMQSLLMGIIGLIIGVIYGFIFIFLGAAFSALGVRGDAP
JGI1027J12803_1047713201	3300000955	Soil	MAEMTIKRFGVLSVGKMQSLLMGIIGLIIGVIYGLIFIFVGAAFTA
JGI1027J12803_1071773781	3300000955	Soil	MAEMTIRRFGVISVAKMYGLLLFVMGLIIGVIYGLFFIIFGAAMTAIAPGGRDA
C687J26616_100057071	3300002120	Soil	MAEMTIRRFGILSVAKMQALLMFVIGLITGVIYGLLFMLFGAAVA
JGI25612J43240_10391251	3300002886	Grasslands Soil	MAEMTIRRFGIFSVAKMQCLVMFVIGLIVGVIYGLIFMLVGASLSAFGARG
Ga0062593_1005706313	3300004114	Soil	MAEMTIRRFGVFSVAKMHGLLMFIFGLIIGVIYGLFFIIFGAAMSAMGGAR
Ga0062593_1010062091	3300004114	Soil	MAEMTIRRFGVISIAKMYGLLMFIFGLVFGVIYGLILIVFGAAISA
Ga0063356_1034549012	3300004463	Arabidopsis Thaliana Rhizosphere	MAEMTIRRLGVFSVAKIEGLLLFVMGLIIGVIYGLVFMIF
Ga0062594_1009539482	3300005093	Soil	MAEMTIRRFGVISVAKMYGLLMFIFGLVFGVIYGLILIVFGAAISAMA
Ga0066679_110616821	3300005176	Soil	MALMTIRRVGVFSLAKIQGLLMLVIGLIIGVIYGLIFMIFG
Ga0065712_107779021	3300005290	Miscanthus Rhizosphere	MAEMTIRRFGVLSVAKMQSLLMGIIGLIVGVIYGLIFIFVGAAF
Ga0068869_1000616671	3300005334	Miscanthus Rhizosphere	MAEMTIRRFGVLSVAKMYGLLMFIFGLVFGVIYGLFLILFGAAM
Ga0070689_1016813582	3300005340	Switchgrass Rhizosphere	MAEMTIRRFGVVSVGKMYGLLMFIFGLIFGVIYGLFFIIFGAAMSALGGGRE
Ga0070703_101366921	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFGVLSVAKMYGLLMFIFGLVFGVIYGLFLILF
Ga0070705_1001905731	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFGVISVAKMYGLLTFVIGLIIGVIYGLFFILFGAAMSAIAPGGRD
Ga0070705_1005844011	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFGVISVAKMYALLMFIFGLIFGVIYGLILIVFGAAISALTPGSD
Ga0070694_1001148024	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFGVFSVAKMYGLLTFIFGLVFGVIYGLFFIIFGAAMS
Ga0070694_1008189491	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFGIFSVAKMQSLVMFVIGIIIGVIYGLFFMLFGAAISAF
Ga0070694_1015714801	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFNVFSVAKIQGFLTFVIGLLIGVIYGFAFMIFGAAISSLAP
Ga0070708_1006981421	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAQMTIRRVGIFSVAKIQALLSLVLGLIFGVIYGLFFMLFGAAISAM
Ga0070708_1014385242	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRVGVLSLAKIQGFLMFIMGLIIGVIYGLMFMIFGVAI
Ga0070681_101604211	3300005458	Corn Rhizosphere	MAEMTIRRFGVVSVGKMHGLLMFIMGLIIGVLYGLFFIIFGAAATLGGGGDNA
Ga0070706_1006403851	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFGIFSVAKMQSLVMFVIGIIIGVIYGLFFMLFGAAISAFGVRGEGSAA
Ga0070707_1008498872	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFGVFSVAKMYGLLTFIFGLVFGVIYGLFFIIFGAA
Ga0070699_1000111571	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFGVISVAKMYGLLMFIFGLIFGVLYGLFFIIFG
Ga0070697_1011979662	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFGVLSVAKMYGLLTFIFGLIFGVIYGLFFIIFGAAMTAMTGSNSTA
Ga0070695_1003670911	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIRRFGVISVAKMYGLLMFIFGLVFGVIYGLILIVFGAAI*
Ga0070695_1007412881	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIKRFGVISVAKMYGLITFIFGLIFGVLYGLFFIIFGAAMS
Ga0070696_1001290151	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIKRFGVFSVAKMQSLVMFVIGLVIGVIYGLIFIIFGAAITA
Ga0070665_1004203413	3300005548	Switchgrass Rhizosphere	MAEMTIRRFGVFSVAKMQSLLMGVIGLIVGVIYGLIFIFVGAAFSALGVRGDAPNL
Ga0070704_1013137262	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIKRFGVWSVAKMYGILSFIFGLIIGVIYGVFLMIFGAAMASLAPEGE
Ga0070664_1018859072	3300005564	Corn Rhizosphere	MAEMTIRRFGVFSVAKMYGLLMFLFGLIFGVIYGLILIVFGAA
Ga0066703_106345902	3300005568	Soil	MAEMTVRRVGVLSLAKMQGLLMFVMGLIIGVIYGLIIMLFGAAM
Ga0066694_103120072	3300005574	Soil	MAEMTIRRVGVLSLAKIQGLLMLVIGLIIGVIYGLIFMI
Ga0066702_105091602	3300005575	Soil	MAEMTIRRVGVFSLAKIQGLLMLVIGLIIGVIYGLIFMIFG
Ga0068857_1012713011	3300005577	Corn Rhizosphere	MAEMTIRRFNVFSVAKIQGFLGFVIGLLIGVIYGLVFMIF
Ga0068854_1018665742	3300005578	Corn Rhizosphere	MAEMTIRRFGVISVAKMYGLLLFVMGLVIGVIYGLFFIIFGAAMSA
Ga0068852_1022389361	3300005616	Corn Rhizosphere	MAEMTIRRFGVISVAKMYGLLMFIFGLVFGVIYGLILIV
Ga0068859_1011936811	3300005617	Switchgrass Rhizosphere	MAEMTIRRFGVISVAKMYGLLTFVIGLIIGVIYGLFFI
Ga0068861_1013236262	3300005719	Switchgrass Rhizosphere	MAEMTIRRFGVLSVAKMYGLLMFIFGLVFGVIYGLFLILFGAAMTAASGEGINA
Ga0066658_101035171	3300006794	Soil	MAEMTIRRVGVFSLAKIQGLLMLVIGLIIGVIYGLIFMIFGAAL
Ga0079220_103417581	3300006806	Agricultural Soil	MAEMTIRRFGVISVAKIYGLLMFIFGLIIGVIYGL
Ga0075424_1025462581	3300006904	Populus Rhizosphere	MAEMTIRRFGVFSVAKMQSLLMGVIGLIVGVIYGLIFIFVG
Ga0075436_1010086671	3300006914	Populus Rhizosphere	MAEMTIRRFSVISVAKMYGLITFIFGLIFGVLYGLFFIIFGAAMSAVG
Ga0079218_119671231	3300007004	Agricultural Soil	MAEMTIRRFGVLSVAKMQALVMFVLGLVIGVIYGLIFIVFGAAITAMSPSGDAAAAGA
Ga0099791_106675091	3300007255	Vadose Zone Soil	MAQMTIRRVGVLSIAKIEGFLMFIVGLIIGVIYGLTVMIFGAVIMSA
Ga0105244_103868751	3300009036	Miscanthus Rhizosphere	MAEMTIKRFSVLSVGKMQSLLMGIIGLIIGVIYGLIFIF
Ga0105244_104870292	3300009036	Miscanthus Rhizosphere	MAEMTIRRFGVISVAKMYSLLLFIFGLIFGVIYGLILIVFGAAISALGPGRDATAG
Ga0105245_103930183	3300009098	Miscanthus Rhizosphere	MAEMTIRRFNVFSVAKIQGFLGFVIGLLIGVIYGFLFMIFGAAIS
Ga0105243_124241313	3300009148	Miscanthus Rhizosphere	MAEMTIKRFGVISIAKMYGLLMFIFGLVFGVIYGLILIVFGAA
Ga0111538_122710622	3300009156	Populus Rhizosphere	MAEMTIKRFGVFSVAKMQSLVMFVIGLVIGVIYGLIFI
Ga0111538_127971112	3300009156	Populus Rhizosphere	MAEMTIKRFGVFSVAKMQSLVMFVIGLVIGVIYGLIF
Ga0105241_124323352	3300009174	Corn Rhizosphere	MAEMTIRRFNVFSVAKIQGFLGFVIGLLIGVVYGLVFMIFGAAISSLAPQG
Ga0105242_103357543	3300009176	Miscanthus Rhizosphere	MAEMTIRRFGVFSVAKMQSLVMFVIGLVIGVIYGLIFIIFGAAITALAP
Ga0126307_106590822	3300009789	Serpentine Soil	MAEMTIRRFGVMSVAKMYGLLMFIFGLIFGVIYGLFFIIFGAA
Ga0099796_105021532	3300010159	Vadose Zone Soil	MAEMTIRRFGIFSVAKMQSLVMFVIGLIVGVIYGLFFMLF
Ga0134109_100985632	3300010320	Grasslands Soil	MAEMTIRRVGVFSLAKIQGLLMLVIGLIIGVIYGLIFMIFGAALTSVMPKDESQ
Ga0134126_128907411	3300010396	Terrestrial Soil	MAEMTIRRFGVLSVAKMYGLLTFVIGLIIGVIYGLFFI
Ga0134124_101414131	3300010397	Terrestrial Soil	MAEMTIRRFGVISVAKMYSLLLFIFGLIFGVIYGLILIVF
Ga0134121_122240031	3300010401	Terrestrial Soil	MAEMTIRRFGVISVAKMYALLMFIFGLIFGVIYGLILIVF
Ga0134123_134635622	3300010403	Terrestrial Soil	MAEMTIRRFNVFSVAKIQGFLGFVIGLLIGVIYGFLFMIFGAAISSLAP
Ga0137326_11233631	3300011417	Soil	MAEMTIKRFSVLSVAKMQSLLMGVIGLIIGVIYGLIFIF
Ga0137463_12518492	3300011444	Soil	MAEMTIRRFGVFSVAKIQGLLAFVIGLLIGVIYGLFFMLFGAFMSSLAPRSD
Ga0120182_10130221	3300011993	Terrestrial	MAEMTIRRFGVISVAKMYGLLMFLFGLIFGVIYGLILIVFGAAISAMGPGSA
Ga0137399_101865621	3300012203	Vadose Zone Soil	MAEMTIRRFGIFSVAKMQSLVMFVVGLIVGVIYGLFFMLFGAAISAFGARGDSSVAGG
Ga0137367_111684942	3300012353	Vadose Zone Soil	MAEMTIRRFGVFSVAKMQGLLMFVIGLLIGVIYGLVFMIFGAAMSAMM
Ga0137366_105235722	3300012354	Vadose Zone Soil	MAEMTVRRVGVLSLAKMQGLLMFVMGLIIGVIYGLI
Ga0137384_101123711	3300012357	Vadose Zone Soil	MAEMTVRRVGVLSLAKMQGLLMFVMGLIIGVIYGLIIMLFGAAMSSL
Ga0137390_101223051	3300012363	Vadose Zone Soil	MAEMTIKRFGIFSVAKMQSLVMFVIGLIVGVIYGLFFMLFGAA
Ga0137397_110434882	3300012685	Vadose Zone Soil	MAEMTIRRFSVFSVAKIQGLLGLVIGLLIGILYGLFFMIF
Ga0137394_115919682	3300012922	Vadose Zone Soil	MAEMTIRRFNVFSVAKIQGFLAFVIGLLIGVIYGFAFM
Ga0137359_105316071	3300012923	Vadose Zone Soil	MAQMTIRRVGVFSLAKIQALLTFVIGLIFGVIYGLFFMLFGAAISAMAQRG
Ga0164302_112921372	3300012961	Soil	MAEMTIKRFGVISVAKMYGLITFIFGLIFGVLYGLFFIIFGAAMSAAAGGN
Ga0164304_104102772	3300012986	Soil	MAEMTIRHFGVISVAKMYGLLMFIFGLVFGVIYGLILIVFG
Ga0164304_115333771	3300012986	Soil	MAEMTIRRFGVFSVAKMQSLLMGIIGLIIGVIYGLIFIFVGAAFSALGVR
Ga0132256_1009906241	3300015372	Arabidopsis Rhizosphere	MAEMTIRRFGVFSVAKMQSLLMGIIGLIVGVIYGL
Ga0132255_1009875733	3300015374	Arabidopsis Rhizosphere	MAEMTIKRFGVFSVAKMYGLVTFVIGFIAGVIYGLGMILFGAAISAFGGREATAGGAS
Ga0184623_104494271	3300018056	Groundwater Sediment	MAEMTIRRFSVFSVAKIQGFLGFVIGLLIGVVYGLVIMIFGAAISSLAP
Ga0184615_102125952	3300018059	Groundwater Sediment	MAEMTIRRFSVFSVAKLQGLLAFVIGLLIGVIYGLIFMIFGAAISSMMPQS
Ga0190265_134502202	3300018422	Soil	MAEMTIKRFGVFSVAKMQSLVMLVIGLVIGVIYGLAFMIFGAAISA
Ga0190275_109752772	3300018432	Soil	MAEMTIRRFGVLSVAKMYGLLMFIFGLIIGVIYGLFFILFGAAMS
Ga0190274_108457341	3300018476	Soil	MAEMTIRRFGVLSVAKMYGLLMFIFGLVFGVIYGLILIVFGAAMSA
Ga0193735_10194324	3300020006	Soil	MAEMMVRRIGVLSLAKMQALLMFVIGLIIGVIYGLIFMIFG
Ga0207697_101767261	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMTIKRFSVLSVGKMQSLLMGIIGLIIGVIYGLIFIFVGAAFTAIG
Ga0207695_114195691	3300025913	Corn Rhizosphere	MAEMTIRRFNVFSVAKIQGFLGFVIGLLIGVIYGFLF
Ga0207660_113748631	3300025917	Corn Rhizosphere	MAEMTIKRFSVLSVGKMQSLLMGIIGLIIGVIYGLIFIFVGAAFTAIGSRSD
Ga0207686_100703051	3300025934	Miscanthus Rhizosphere	MAEMTIRRFNVFSVAKIQGFLAFVIGLLIGVLYGFAFMIF
Ga0207651_106835191	3300025960	Switchgrass Rhizosphere	MAEMTIRRFGVISVAKMYSLLLFIFGLIFGVIYGLILIVFGAAI
Ga0210102_10490471	3300025971	Natural And Restored Wetlands	MAEMTIRRFGVFSVAKINGLLGFIIGLLIGLIYGLFLILFGAA
Ga0207703_106581371	3300026035	Switchgrass Rhizosphere	MAEMTIRRFGVISVAKMYGLLMFIFGLVFGVIYGLILIVFGAAISA
Ga0207675_1001954523	3300026118	Switchgrass Rhizosphere	MAKMMVKRVGVLSAAKMYAMVGLGIGLIVGVIYGLIFMIFG
Ga0209438_10211711	3300026285	Grasslands Soil	MAEMTIRRFGIFSVAKMQCLVMFVIGLIVGVIYGLIFMLVGA
Ga0209803_13299351	3300026332	Soil	MAEMTIRRVGVLSLARIQGLLMLVIGLIIGVIYGLIHNALAGVV
Ga0209592_11599952	3300027731	Freshwater Sediment	MAEMTIKRFSVISVAKIQGLLMFVIGLIIGVIYGLFFMVFG
Ga0268265_105364793	3300028380	Switchgrass Rhizosphere	MAEMTIKRFGVLSVGKMQSLLMGIIGLIIGVIYGL
Ga0268265_106728373	3300028380	Switchgrass Rhizosphere	MAEMTIKRFGVISIAKMYGLLMFIFGLVFGVIYGLILIVFGAAISAFGPNRDA
Ga0310888_111088891	3300031538	Soil	MAEMTIKRFGVFSVAKMQSLVMFVIGLVIGVIYGLIFIIFG
Ga0310813_117857201	3300031716	Soil	MAEMTIRRFGVISVAKMYGLLMFIFGLVFGVIYGLILIVLGASLSAFGGGRD
Ga0307468_1009040751	3300031740	Hardwood Forest Soil	MAEMTIRRFNVFSVAKIQGFLTFVIGLLIGVIYGFVFMIFGAAISSLAPQG
Ga0310900_109123132	3300031908	Soil	MAEMTIKRFGVFSVAKMQSLVMFVIGLVIGVIYGLIFIIFGAAIT
Ga0307412_119416321	3300031911	Rhizosphere	MAEMTIRRFGVISVAKMYGLLMFLFGLIFGVIYGLILIVFGAAISAMGPNSD
Ga0307409_1020574782	3300031995	Rhizosphere	MAEMTIRRFGVISVAKMYGLLMFLFGLIFGVIYGLILIVFGAA
Ga0310897_103150642	3300032003	Soil	MAEMTIRRFGVLSVAKMYALLLFVFGLIIGVIYGLIFIVMGASMFALS
Ga0316628_1000957035	3300033513	Soil	MAEMTIRRFGVFSVAKMQSLVMCVIGLIIGVIYGLVFMIFGAAISALAPKGESQ
Ga0364942_0006747_2_157	3300034165	Sediment	MAEMTIKRFSVFSVAKMQGLLAFVIGLLIGVIYGLFFMVFGAAMSSLMPQGE
Ga0364942_0009754_2862_2969	3300034165	Sediment	MAEMTIRRFSVFSVAKLQGLLAFVIGLLIGVIYGLI
Ga0373950_0082884_530_670	3300034818	Rhizosphere Soil	MAEMTIKRFGVFSVAKMYGLVTFVVGFIVGVIYGLILIVFGAAISAF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091744

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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