Metagenome / Metatranscriptome Family F091649

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091649
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	49 residues
Representative Sequence	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTGG
Number of Associated Samples	55
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.03 %
% of genes near scaffold ends (potentially truncated)	31.78 %
% of genes from short scaffolds (< 2000 bps)	88.79 %
Associated GOLD sequencing projects	46
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.028 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion (31.776 % of family members)
Environment Ontology (ENVO)	Unclassified (84.112 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline) (44.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.96% β-sheet: 0.00% Coil/Unstructured: 34.04%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF10686	YAcAr	18.69
PF00136	DNA_pol_B	2.80
PF03104	DNA_pol_B_exo1	1.87
PF03237	Terminase_6N	1.87
PF01555	N6_N4_Mtase	0.93
PF13479	AAA_24	0.93
PF00961	LAGLIDADG_1	0.93
PF00303	Thymidylat_synt	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0417	DNA polymerase B elongation subunit	Replication, recombination and repair [L]	4.67
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	0.93
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.93
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.93
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
All Organisms	root	All Organisms	28.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
cellular organisms	root	All Organisms → cellular organisms	22.43 %
Viruses	superkingdom	All Organisms → Viruses	6.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	9.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.74 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	9.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3.74 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	9.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	2.80 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.93 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	9.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	2.80 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.93 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	9.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	2.80 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.93 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Parcubacteria group bacterium ADurb.Bin216	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	9.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	2.80 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	0.93 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Parcubacteria group bacterium ADurb.Bin216	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	9.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Paenibacillus polymyxa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus polymyxa	2.80 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	0.93 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111018\|Meso_c1163146	Not Available	538	Open in IMG/M
2209111018\|Meso_c149299	Not Available	512	Open in IMG/M
2209111018\|Meso_c393587	Not Available	542	Open in IMG/M
2209111018\|Meso_c507244	Not Available	533	Open in IMG/M
2209111018\|Meso_c545372	Not Available	532	Open in IMG/M
2209111018\|Meso_c818043	Not Available	518	Open in IMG/M
3300000510\|Foulum_1005472	All Organisms → Viruses → Predicted Viral	1567	Open in IMG/M
3300000510\|Foulum_1006733	All Organisms → cellular organisms → Archaea	2066	Open in IMG/M
3300001975\|Draft_10149299	Not Available	516	Open in IMG/M
3300001975\|Draft_10271015	Not Available	524	Open in IMG/M
3300001975\|Draft_10421475	Not Available	512	Open in IMG/M
3300001975\|Draft_10507244	Not Available	535	Open in IMG/M
3300001975\|Draft_10545372	Not Available	536	Open in IMG/M
3300001975\|Draft_10818043	Not Available	517	Open in IMG/M
3300002163\|JGI24707J26582_10046031	All Organisms → cellular organisms → Archaea	1655	Open in IMG/M
3300002163\|JGI24707J26582_10046747	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	1635	Open in IMG/M
3300002163\|JGI24707J26582_10067999	All Organisms → Viruses → Predicted Viral	1199	Open in IMG/M
3300002164\|JGI24708J26588_10115623	Not Available	776	Open in IMG/M
3300002166\|JGI24713J26584_10006472	Not Available	6391	Open in IMG/M
3300002166\|JGI24713J26584_10095648	Not Available	587	Open in IMG/M
3300002167\|JGI24714J26587_10041266	All Organisms → Viruses → Predicted Viral	1313	Open in IMG/M
3300002167\|JGI24714J26587_10070636	Not Available	798	Open in IMG/M
3300002167\|JGI24714J26587_10084435	Not Available	686	Open in IMG/M
3300002168\|JGI24712J26585_10105017	Not Available	939	Open in IMG/M
3300002170\|JGI24711J26586_10116004	Not Available	705	Open in IMG/M
3300002170\|JGI24711J26586_10138749	Not Available	617	Open in IMG/M
3300002170\|JGI24711J26586_10141731	Not Available	608	Open in IMG/M
3300002173\|JGI24709J26583_10085566	All Organisms → Viruses → Predicted Viral	1071	Open in IMG/M
3300002173\|JGI24709J26583_10095482	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300002173\|JGI24709J26583_10126694	Not Available	772	Open in IMG/M
3300002173\|JGI24709J26583_10205207	Not Available	529	Open in IMG/M
3300002174\|JGI24710J26742_10108064	Not Available	949	Open in IMG/M
3300002174\|JGI24710J26742_10129710	Not Available	812	Open in IMG/M
3300002174\|JGI24710J26742_10189519	Not Available	598	Open in IMG/M
3300002174\|JGI24710J26742_10202815	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300002174\|JGI24710J26742_10217533	Not Available	538	Open in IMG/M
3300002293\|JGI24504J29685_1025540	Not Available	520	Open in IMG/M
3300002377\|JGI24500J29687_10026911	Not Available	965	Open in IMG/M
3300002377\|JGI24500J29687_10037456	Not Available	511	Open in IMG/M
3300002378\|JGI24502J29692_10115183	Not Available	734	Open in IMG/M
3300002392\|JGI24503J29689_10034695	Not Available	1762	Open in IMG/M
3300002392\|JGI24503J29689_10056532	Not Available	853	Open in IMG/M
3300002392\|JGI24503J29689_10062567	Not Available	604	Open in IMG/M
3300002392\|JGI24503J29689_10111409	Not Available	603	Open in IMG/M
3300002898\|draft_10338613	Not Available	740	Open in IMG/M
3300003667\|LSCM3L_1056352	Not Available	542	Open in IMG/M
3300005835\|Ga0078910_108703	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300005835\|Ga0078910_126523	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	1076	Open in IMG/M
3300006801\|Ga0079223_10401139	Not Available	851	Open in IMG/M
3300006805\|Ga0075464_10391155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	844	Open in IMG/M
3300009095\|Ga0079224_101247616	Not Available	1058	Open in IMG/M
3300009647\|Ga0123326_1187846	Not Available	639	Open in IMG/M
3300009657\|Ga0116179_1159910	Not Available	783	Open in IMG/M
3300009658\|Ga0116188_1074500	Not Available	1427	Open in IMG/M
3300009666\|Ga0116182_1075091	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	1785	Open in IMG/M
3300009667\|Ga0116147_1010800	Not Available	6414	Open in IMG/M
3300009668\|Ga0116180_1184057	Not Available	823	Open in IMG/M
3300009670\|Ga0116183_1089396	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	1663	Open in IMG/M
3300009671\|Ga0123334_1083408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus polymyxa	1668	Open in IMG/M
3300009674\|Ga0116173_1126697	All Organisms → Viruses → Predicted Viral	1278	Open in IMG/M
3300009680\|Ga0123335_1217093	Not Available	973	Open in IMG/M
3300009680\|Ga0123335_1487350	Not Available	554	Open in IMG/M
3300009685\|Ga0116142_10386648	Not Available	676	Open in IMG/M
3300009687\|Ga0116144_10422447	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	665	Open in IMG/M
3300009687\|Ga0116144_10657230	Not Available	505	Open in IMG/M
3300009690\|Ga0116143_10142666	Not Available	1334	Open in IMG/M
3300009780\|Ga0116156_10135249	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	1387	Open in IMG/M
3300010286\|Ga0134092_1000193	All Organisms → cellular organisms → Archaea → Euryarchaeota	64755	Open in IMG/M
3300010340\|Ga0116250_10060873	All Organisms → cellular organisms → Archaea	2661	Open in IMG/M
3300010356\|Ga0116237_11588131	Not Available	535	Open in IMG/M
3300010365\|Ga0116251_10254689	Not Available	1021	Open in IMG/M
3300014203\|Ga0172378_10362865	All Organisms → Viruses → Predicted Viral	1102	Open in IMG/M
3300014203\|Ga0172378_11048706	Not Available	581	Open in IMG/M
3300014204\|Ga0172381_10046328	Not Available	3763	Open in IMG/M
3300014204\|Ga0172381_10692367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus polymyxa	772	Open in IMG/M
3300014206\|Ga0172377_10340475	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	1259	Open in IMG/M
3300014206\|Ga0172377_11016276	Not Available	639	Open in IMG/M
3300014206\|Ga0172377_11478713	Not Available	509	Open in IMG/M
3300025618\|Ga0208693_1011097	Not Available	4412	Open in IMG/M
3300025629\|Ga0208824_1114480	Not Available	778	Open in IMG/M
3300025638\|Ga0208198_1102252	Not Available	847	Open in IMG/M
3300025689\|Ga0209407_1043151	All Organisms → cellular organisms → Archaea	1879	Open in IMG/M
3300025708\|Ga0209201_1108223	Not Available	985	Open in IMG/M
3300025896\|Ga0208916_10466996	Not Available	550	Open in IMG/M
3300026290\|Ga0209510_1054632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus polymyxa	1671	Open in IMG/M
3300027510\|Ga0209537_1004062	All Organisms → cellular organisms → Archaea	12817	Open in IMG/M
3300027510\|Ga0209537_1048509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1345	Open in IMG/M
3300027510\|Ga0209537_1090703	Not Available	742	Open in IMG/M
3300027510\|Ga0209537_1094636	Not Available	713	Open in IMG/M
3300028601\|Ga0265295_1043365	All Organisms → Viruses → Predicted Viral	2895	Open in IMG/M
3300028602\|Ga0265294_10122551	Not Available	2023	Open in IMG/M
3300028602\|Ga0265294_10371138	Not Available	917	Open in IMG/M
3300028602\|Ga0265294_10372242	Not Available	915	Open in IMG/M
3300028602\|Ga0265294_10385068	Not Available	893	Open in IMG/M
3300028602\|Ga0265294_10411651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	851	Open in IMG/M
3300028602\|Ga0265294_10419283	Not Available	840	Open in IMG/M
3300028602\|Ga0265294_10452824	Not Available	794	Open in IMG/M
3300028602\|Ga0265294_10502934	Not Available	736	Open in IMG/M
3300028602\|Ga0265294_10556158	Not Available	684	Open in IMG/M
3300028602\|Ga0265294_10574252	Not Available	668	Open in IMG/M
3300028603\|Ga0265293_10103299	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300028603\|Ga0265293_10250070	Not Available	1174	Open in IMG/M
3300028603\|Ga0265293_10255351	Not Available	1156	Open in IMG/M
3300028603\|Ga0265293_10696776	Not Available	545	Open in IMG/M
3300029822\|Ga0134854_1046523	Not Available	999	Open in IMG/M
3300029822\|Ga0134854_1046574	Not Available	998	Open in IMG/M
3300029825\|Ga0134835_1007159	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	7103	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	84.11%
Environmental	Environmental	15.89%

Habitat	Taxonomy	Distribution
Biotransformation	Engineered → Biotransformation	31.78%
Solid Waste	Engineered → Solid Waste	20.56%
Wastewater	Engineered → Wastewater	18.69%
Aquatic	Environmental → Aquatic	14.02%
Bioreactor	Engineered → Bioreactor	12.15%
Terrestrial	Environmental → Terrestrial	1.87%
Unclassified	Engineered → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	31.78%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	18.69%
Landfill	Engineered → Solid Waste → Landfill	14.95%
Freshwater	Environmental → Aquatic → Freshwater	12.15%
Anaerobic	Engineered → Bioreactor → Anaerobic	6.54%
Grass	Engineered → Solid Waste → Grass	5.61%
Unclassified	Engineered → Bioreactor → Unclassified	3.74%
Marine	Environmental → Aquatic → Marine	1.87%
Soil	Environmental → Terrestrial → Soil	1.87%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	1.87%
Unclassified	Engineered → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	31.78%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	18.69%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	14.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	12.15%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	6.54%
Composting	Engineered → Solid Waste → Grass → Composting	5.61%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	3.74%
Coastal	Environmental → Aquatic → Marine → Coastal	1.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.87%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	1.87%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	31.78%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	18.69%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	14.95%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	11.21%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	6.54%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	5.61%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.87%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	1.87%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water	0.93%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	31.78%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	18.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	11.21%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	9.35%
Solid Waste From Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor	5.61%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	5.61%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	4.67%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	2.80%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	1.87%
Anaerobic Digester	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester	1.87%
Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Biogas Reactor	1.87%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water → Coalbed Water	0.93%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	0.93%
Switchgrass Degrading	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111018	Mesophilic bioreactor microbial communities at Bielefeld, Germany	Engineered	Open in IMG/M
3300000510	Anaerobic digester microbial communities from Northern Denmark, sample from Foulum manure	Engineered	Open in IMG/M
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002164	Biogas fermentation microbial communities from Germany - Plant 1 DNA2	Engineered	Open in IMG/M
3300002166	Biogas fermentation microbial communities from Germany - Plant 4 DNA1	Engineered	Open in IMG/M
3300002167	Biogas fermentation microbial communities from Germany - Plant 4 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002174	Biogas fermentation microbial communities from Germany - Plant 2 DNA2	Engineered	Open in IMG/M
3300002293	Biogas fermentation microbial communities from Germany - Plant 4 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002377	Biogas fermentation microbial communities from Germany - Plant 2 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002378	Biogas fermentation microbial communities from Germany - Plant 3 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002392	Biogas fermentation microbial communities from Germany - Plant 3 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300003667	Lithgow State Coal Mine Metagenomic Study (LSCM 3 Late (Sample 2))	Environmental	Open in IMG/M
3300005835	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 1 to 3 kb reads	Engineered	Open in IMG/M
3300006801	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009658	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009667	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG3_MetaG	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009674	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009685	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG	Engineered	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300009690	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG	Engineered	Open in IMG/M
3300009780	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG	Engineered	Open in IMG/M
3300010286	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 3_6_20_6_A3 metaG	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010365	AD_USDIca	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025629	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025638	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025689	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026290	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300028601	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Methane capture system biofilm	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300029822	Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T	Engineered	Open in IMG/M
3300029825	Liquor fermentation pit mud microbial communities from Luzhou, China - Meta-1-2-440-M	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Meso_11631462	2209111018	Solid Waste From Bioreactor	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKN
Meso_1492992	2209111018	Solid Waste From Bioreactor	MMPTYDDPDYEWKQMVKKNGICDPYEESIREFKEEFERIEKKLKQTGG
Meso_3935871	2209111018	Solid Waste From Bioreactor	MPTXDDPDYELETNGKENGICDPYEKSIREFKEEFDGIEKKLNRQEDELCV
Meso_5072442	2209111018	Solid Waste From Bioreactor	MPVYDDPDYEWKQMVKKNGICDPYEESIREFKEEFERIERN
Meso_5453721	2209111018	Solid Waste From Bioreactor	QMVKKNGICDPYEESIREFKEEFERIEKEFIEEYKRIEKKLKQTGG
Meso_8180431	2209111018	Solid Waste From Bioreactor	MPTYDDPDYEWKQMVKKNGICDPYEESIREFKEEIERIEKEFIEEYKRIEKKLKQTGG
Foulum_10054727	3300000510	Anaerobic Digester	MPTYDDPDYEWKQMVKKNGICDPYEKSLKEFKEEFERIEKKLKQTGR*
Foulum_10067331	3300000510	Anaerobic Digester	MMPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTGG*
Draft_101492992	3300001975	Biogas Fermenter	MMPTYDDPDYEWKQMVKKNGICDPYEESIREFKEEFERIEKKLKQTGG*
Draft_102710152	3300001975	Biogas Fermenter	MMIRIMNRKQIGKEECICDPYEESIREFKEEFERIEKKLKQTGG*
Draft_104214753	3300001975	Biogas Fermenter	MPTYDDQDYEWKQMVKKNGICDPYEKSIREFKEEFERIERIKTDR*
Draft_105072442	3300001975	Biogas Fermenter	MPVYDDPDYEWKQMVKKNGICDPYEESIREFKEEFERIERN*
Draft_105453721	3300001975	Biogas Fermenter	QQMVKKNGICDPYEESIREFKEEFERIEKEFIEEYKRIEKKLKQTGG*
Draft_108180431	3300001975	Biogas Fermenter	SMPTYDDPDYEWKQMVKKNGICDPYEESIREFKEEIERIEKEFIEEYKRIEKKLKQTGG*
JGI24707J26582_100460314	3300002163	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNGVCDPYEKSIREFKEEFERIEKEFIEEYKRIEKKLKQTGG*IMRIIIAG
JGI24707J26582_100467471	3300002163	Biogas Fermentantion	KQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTGG*
JGI24707J26582_100679993	3300002163	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEYERIEKKLKQTGR*
JGI24708J26588_101156231	3300002164	Biogas Fermentantion	MMMPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKEFIEEYKRIEKKLKQTGG
JGI24713J26584_100064727	3300002166	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFEHIEKKLKQTGG*
JGI24713J26584_100956482	3300002166	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFIEEFERIEKKLKQTGG*
JGI24714J26587_100412661	3300002167	Biogas Fermentantion	MPVYDDPDYEWKQMXKKNGICDPYEKSIREFKEEIERIEKEFIEEYKRIEKKLKQTGG*
JGI24714J26587_100706362	3300002167	Biogas Fermentantion	METNGKKNGICDPYEKSIREFIEEFERIEKKLKQTGG*
JGI24714J26587_100844351	3300002167	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNSICDPYEKSIREFKEEFERIEK
JGI24712J26585_101050171	3300002168	Biogas Fermentantion	DYEWKQMVKKNDICDPYEKSIREFKEEYERIEKKFIEEYKRIEKKLKQTGG*
JGI24711J26586_101160043	3300002170	Biogas Fermentantion	KKVKIMPTYDDPDYEWKQMIKKNGICDPYEKSIREFKEEFERIEKKLKQTGG*
JGI24711J26586_101387491	3300002170	Biogas Fermentantion	MPTYDDPDYEWKQMIKKNGICDPYEKSIREFKEEYERIEKEFIEEYKRIEKKLKQTGG*
JGI24711J26586_101417312	3300002170	Biogas Fermentantion	MPTYDDPDYEWKQMVKRNGICDPYEESIREFKEEFERIEKKLKQTGG*
JGI24709J26583_100855661	3300002173	Biogas Fermentantion	KKVKIMPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEYERIEKEFIEEYKRIEKKLKQTGG*
JGI24709J26583_100954821	3300002173	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNSICDPYEKSIREFKEEFERIEKKLKQTGG*
JGI24709J26583_101266942	3300002173	Biogas Fermentantion	MPTYDXXDYEWKQMVKXNGICDPYEESIREFKEEXERIEKKLKQTGG*
JGI24709J26583_102052071	3300002173	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNGICDPYEESIREFKEEIERI
JGI24710J26742_101080641	3300002174	Biogas Fermentantion	MPTYDDPDYEWKQMVKRNGICDPYEESIREFKEEYERIEKKLKQTGG*
JGI24710J26742_101297102	3300002174	Biogas Fermentantion	MMPTYDDPDYEWKQMVKKNGICDPYEKSIRKFKEEIERIEKKLKQTGG*
JGI24710J26742_101895192	3300002174	Biogas Fermentantion	MPMYDDPDYEWKQMIKKNGICDPYEKSIXEFKEEFERIEKEFKEEYKRIEKKLKQTGG*
JGI24710J26742_102028152	3300002174	Biogas Fermentantion	MMMPTYDDPDYEWKQMVKKNGICDPYEESIREFKEEFERIEKKLKQTGG*
JGI24710J26742_102175332	3300002174	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNGICDPYEESIRGFKEEFERIEKKLKQTGG*
JGI24504J29685_10255401	3300002293	Biogas Fermentantion	MPVYDDPDYEWKQMIKKNGICDPYEKSIREFKEEYERIEKEFIEEYKRIEKKLKQTGG*
JGI24500J29687_100269111	3300002377	Biogas Fermentantion	MPTYDDPDYEWKQMIKKNDICDPYEKSIREFKEEYERIEKKLKQTGG*
JGI24500J29687_100374561	3300002377	Biogas Fermentantion	VKIMPTYDDPDYEWKQMVKKNGICDPYEESIREFKEEFERIEKKLKQTGG*
JGI24502J29692_101151831	3300002378	Biogas Fermentantion	DPDYEWKQMIKKNDICDPYEKSIREFKEEFERIEKKLKQTGG*
JGI24503J29689_100346951	3300002392	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNDICDPYEKSIREFKEEFERIEKEFIEEYKRIEKKLKQTGG*
JGI24503J29689_100565321	3300002392	Biogas Fermentantion	DPDYEWKQMIKKNGICDPYEKSIREFKEEYERIEKEFIEEYKRIEKKLKQTGG*
JGI24503J29689_100625672	3300002392	Biogas Fermentantion	MPVYDDPDYEWKQMVKKNDICDPYEKSIREFKEEYERIEKEFIEEYKRIEKKLKQTGG*
JGI24503J29689_101114091	3300002392	Biogas Fermentantion	DDPDYEWKQMIKKNGICDPYEKSIREFKEEYERIEKKLKQTGG*
draft_103386131	3300002898	Biogas Fermenter	DPDYAWKQMVKKNGICDPYEESIREFIEEYKRIEKKLKQTGG*
LSCM3L_10563521	3300003667	Coalbed Water	KKNGICDPYEKSIREFKEEFERIEKEFIEEYKRIEKKLKQTGG*
Ga0078910_1087035	3300005835	Biogas Reactor	MPTYDDPDYEWKQMVKKNGICDPYEESIREFKEEFERIEKKLKQTGG*
Ga0078910_1265233	3300005835	Biogas Reactor	MPTYDDPDYEWKQMIKKNGICDPYEKSIREFKEEFERIEKEFIEEYKRIEKKLKQTGG*
Ga0079223_104011393	3300006801	Agricultural Soil	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTGE*
Ga0075464_103911553	3300006805	Aqueous	MPVYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTGR*
Ga0079224_1012476163	3300009095	Agricultural Soil	MPVYEDPDYEWKQMVKKNGICDPYEESIREFKEEYERIEKEFIEEYKRIEKKLKQTGG*
Ga0123326_11878461	3300009647	Anaerobic Biogas Reactor	IPVYDDPDYEWKQMVKKNGICDPYEKSIREFIEEFERIEKKLKQTGG*
Ga0116179_11599102	3300009657	Anaerobic Digestor Sludge	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKN*
Ga0116188_10745004	3300009658	Anaerobic Digestor Sludge	MMPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEIERIEKEFIEEYKRIEKKLKQTGG*
Ga0116182_10750911	3300009666	Anaerobic Digestor Sludge	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTG
Ga0116147_10108008	3300009667	Anaerobic Digestor Sludge	MMMPTYDDPDYEWKQMVKKNGVCDPYEKSIREFKEEIERIEKEFIEEYKRIEKKLKQTGG
Ga0116180_11840572	3300009668	Anaerobic Digestor Sludge	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTDG*
Ga0116183_10893967	3300009670	Anaerobic Digestor Sludge	MPVYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTGG*
Ga0123334_10834084	3300009671	Anaerobic Biogas Reactor	MPVYDDPDYEWKQMVKKNGICDPYEKSIREFIEEFERIEKKLKQTGG*
Ga0116173_11266975	3300009674	Anaerobic Digestor Sludge	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFIEEYKRIEKKLKQTGG*
Ga0123335_12170931	3300009680	Anaerobic Biogas Reactor	IMPTYDDPDYEWKQMVKKNGICDPYEESIREFEEEFERIEKKLKQTGG*
Ga0123335_14873502	3300009680	Anaerobic Biogas Reactor	VEIMPTYDDPDYEWKQMLKKNGICDPYEESIREFKEEYKRIEKKLKQTGG*
Ga0116142_103866481	3300009685	Anaerobic Digestor Sludge	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQIGG*
Ga0116144_104224471	3300009687	Anaerobic Digestor Sludge	MPVYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQ
Ga0116144_106572301	3300009687	Anaerobic Digestor Sludge	MPIYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKK
Ga0116143_101426664	3300009690	Anaerobic Digestor Sludge	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTGG*
Ga0116156_101352494	3300009780	Anaerobic Digestor Sludge	MPVYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTNENYDKTS
Ga0134092_100019372	3300010286	Switchgrass Degrading	MPVYDNPDYEWKQMVKKNGICDPYEESIREFKEEFERIEKKLKQTGG*
Ga0116250_100608734	3300010340	Anaerobic Digestor Sludge	MMMPTYDDPDYEWKQMVKKNDVCDPYERSIREFKEEIERIEKKLKQTGG*
Ga0116237_115881312	3300010356	Anaerobic Digestor Sludge	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQ
Ga0116251_102546893	3300010365	Anaerobic Digestor Sludge	VKVKIMPVYDDPDYEWKQMVKKNDICDPYEKSIREFKEEFERIEKKLKQTGG*
Ga0172378_103628653	3300014203	Groundwater	MPTYDDPDYEWKQMVKKNGICDPYKKSIREFKEEFERIEKKLKQTGG*
Ga0172378_110487062	3300014203	Groundwater	MMMPSYDDPDYEWKQMVKKNDICDPYEKSIREFIEEYERIEKKLKQTGG*
Ga0172381_100463283	3300014204	Landfill Leachate	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFEEAFKKIEDKMRKTNYGERSDN*
Ga0172381_106923671	3300014204	Landfill Leachate	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEYERIEKKLKQTGG*
Ga0172377_103404755	3300014206	Landfill Leachate	MPVYDDPDYEWKQMIKKNGICDPYEKSIREFKEEFERIEKKLKQTGR*
Ga0172377_110162762	3300014206	Landfill Leachate	MPTYDDPDYEWKQMVKKNGICDPYEESIRGFKEEFERIEKKLKQTGR*
Ga0172377_114787131	3300014206	Landfill Leachate	PDYEWKQMVKKNGICDPYEESIREFKEEFERIEKKLKQTGG*
Ga0208693_10110978	3300025618	Anaerobic Digestor Sludge	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTDG
Ga0208824_11144803	3300025629	Anaerobic Digestor Sludge	MPTYDDPDYEWKQMVKKNGVCDPYEKSIREFKEEIERIE
Ga0208198_11022524	3300025638	Anaerobic Digestor Sludge	MMPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEIERIEKEFIEEYKRIEKKLKQTGG
Ga0209407_10431512	3300025689	Anaerobic Digestor Sludge	MMPTYDDPDYEWKQMVKKNGVCDPYEKSIREFKEEIERIEKEFIEEYKRIEKKLKQTGG
Ga0209201_11082233	3300025708	Anaerobic Digestor Sludge	MPTYDDPDYEWKQMVKKNGICDPYEESIREFKEEFERIEKKLKQTGG
Ga0208916_104669961	3300025896	Aqueous	MPVYDDPDYEWKQMIKKNGICDPYEKSIREFKEEFERIEKKLKQTGG
Ga0209510_10546324	3300026290	Anaerobic Biogas Reactor	MPVYDDPDYEWKQMVKKNGICDPYEKSIREFIEEFERIEKKLKQTGG
Ga0209537_100406215	3300027510	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFEHIEKKLKQTGG
Ga0209537_10485094	3300027510	Biogas Fermentantion	MPVYDDPDYEWKQMIKKNGICDPYEKSIREFKEEYERIEKEFIEEYKRIEKKLKQTGG
Ga0209537_10907031	3300027510	Biogas Fermentantion	MMPTYDDPDYEWKQMVKKNSICDPYEKSIREFKEEFERIEKKLKQTGG
Ga0209537_10946363	3300027510	Biogas Fermentantion	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEYERIEKE
Ga0265295_104336510	3300028601	Landfill Leachate	MVLEVKVKIMPTYDDPDYEWKQMIKKNGKCDPYEESIREFKEEYERIEKEFIEEYKRIEKKLKQTGR
Ga0265294_101225512	3300028602	Groundwater	MPVYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKEFIEEYKRIEKKLKQTGG
Ga0265294_103711382	3300028602	Groundwater	VKIMPVYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKFIEEYKRIEKKLKQTG
Ga0265294_103722422	3300028602	Groundwater	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFIEEFERIEKKLKQTGG
Ga0265294_103850683	3300028602	Groundwater	MMPSYDDPDYEWKQMVKKNGICDPYEKSIREFEEAFKKIEDKMRKTNYGERSDN
Ga0265294_104116511	3300028602	Groundwater	MVLEVKVKIMPVYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTGR
Ga0265294_104192831	3300028602	Groundwater	MPVYDDPDYEWKQMVKKNGICDPYEKNIKEFKEEFERIEKKLKQTGG
Ga0265294_104528242	3300028602	Groundwater	MPVYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTGG
Ga0265294_105029342	3300028602	Groundwater	MPTYDDPDYEWKQMIKKNGICDPYEESIREFKEEYERIEKEFIEEYKRIEKKLKQTGG
Ga0265294_105561581	3300028602	Groundwater	PDYEWKQMVKKNGICDPYEESIREFKEEFERIEKKLKQTGR
Ga0265294_105742521	3300028602	Groundwater	MPVYDDPDYEWKQMVKKNDICDPYEKSIREFKEEFERIEKKFIEKKLKQTGR
Ga0265293_101032993	3300028603	Landfill Leachate	MPTYDDPDYEWKQMVKKNGICDPYEKSIREFKEEFERIEKKLKQTGG
Ga0265293_102500703	3300028603	Landfill Leachate	KKNGICDPYEESIREFKEEYERIEKEFIEEYKRIEKKLKQTGG
Ga0265293_102553513	3300028603	Landfill Leachate	MPTYDDPDYEWKQMVKKNDICDPYEKSIREFKEEYERIEKKLKQTGR
Ga0265293_106967761	3300028603	Landfill Leachate	MPTYDDPDYEWKQMIKKNGICDPYEESIREFKEEYERIEKEFIEEYKRIEKKLKQTG
Ga0134854_10465234	3300029822	Fermentation Pit Mud	MPVYDDPDYAWKQMVKKNGICDPYEKSIKEFKEEFERIEKKLKQTGE
Ga0134854_10465742	3300029822	Fermentation Pit Mud	VDECYECDESCYWRVNQKVLILPVYDDPDYAWKQMVKKNGICDPYEKSIREFIEEFERIEKKLKQTGG
Ga0134835_10071593	3300029825	Fermentation Pit Mud	MPVYDDPDYEWKQMVKKNGICNPYEKSIREFKEEFERIEKKLKQTGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091649

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences