Metagenome / Metatranscriptome Family F091601

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F091601
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	135 residues
Representative Sequence	MKASLGLASALGGGCWLEESRAFLLIAVAVAMATNAASVMAASFGPVRYDPNSDQLIVTMIYDGTNPNHHFSIEWGPCRKLDQPAHQTIDVSILDDQWNDAATKTYTETVRVPLATLSCRPATVTLRTAPDFLTSLDIPARP
Number of Associated Samples	86
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.45 %
% of genes near scaffold ends (potentially truncated)	45.79 %
% of genes from short scaffolds (< 2000 bps)	72.90 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (53.271 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (21.495 % of family members)
Environment Ontology (ENVO)	Unclassified (33.645 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.075 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 11.76% β-sheet: 34.71% Coil/Unstructured: 53.53%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF12681	Glyoxalase_2	5.61
PF00903	Glyoxalase	4.67
PF04828	GFA	4.67
PF00583	Acetyltransf_1	2.80
PF14581	SseB_C	1.87
PF08803	ydhR	1.87
PF13649	Methyltransf_25	1.87
PF07920	DUF1684	0.93
PF01527	HTH_Tnp_1	0.93
PF12850	Metallophos_2	0.93
PF13560	HTH_31	0.93
PF05930	Phage_AlpA	0.93
PF01381	HTH_3	0.93
PF02195	ParBc	0.93
PF02371	Transposase_20	0.93
PF07045	DUF1330	0.93
PF07681	DoxX	0.93
PF03055	RPE65	0.93
PF12680	SnoaL_2	0.93
PF07452	CHRD	0.93
PF03976	PPK2	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	4.67
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.93
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.93
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.93
COG3358	Uncharacterized conserved protein, DUF1684 family	Function unknown [S]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3670	Carotenoid cleavage dioxygenase or a related enzyme	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.93
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.27 %
Unclassified	root	N/A	46.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.27 %
Unclassified	root	N/A	46.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.27 %
Unclassified	root	N/A	46.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.63 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.54 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.74 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.74 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.74 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.93 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.74 %
Bacteroidetes Order II. Incertae sedis	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis	2.80 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.80 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	1.87 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.74 %
Rhodothermaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	2.80 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	1.87 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Burkholderiales bacterium PBB6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB6	0.93 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.93 %
Pararhodospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum	0.93 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.74 %
Salinibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter	2.80 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.87 %
Pararhodospirillum photometricum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	0.93 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.93 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Burkholderiales bacterium PBB6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB6	0.93 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.74 %
Salinibacter ruber	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	2.80 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	1.87 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.93 %
Pararhodospirillum photometricum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	0.93 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Burkholderiales bacterium PBB6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB6	0.93 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.74 %
Salinibacter ruber	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	2.80 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1.87 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	0.93 %
Pararhodospirillum photometricum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	0.93 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Burkholderiales bacterium PBB6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB6	0.93 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.74 %
Salinibacter ruber	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	2.80 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1.87 %
Stigmatella aurantiaca DW4/3-1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	0.93 %
Pararhodospirillum photometricum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	0.93 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Burkholderiales bacterium PBB6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB6	0.93 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10006708	All Organisms → cellular organisms → Bacteria → Proteobacteria	4085	Open in IMG/M
3300005332\|Ga0066388_100695467	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300005332\|Ga0066388_107361430	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005355\|Ga0070671_100444380	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300005363\|Ga0008090_14510469	Not Available	523	Open in IMG/M
3300005434\|Ga0070709_10149020	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300005436\|Ga0070713_100564700	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300005437\|Ga0070710_10256134	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300005439\|Ga0070711_100214656	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300005614\|Ga0068856_100230213	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300005764\|Ga0066903_100372111	All Organisms → cellular organisms → Bacteria	2328	Open in IMG/M
3300006804\|Ga0079221_10289844	Not Available	954	Open in IMG/M
3300006854\|Ga0075425_100012623	All Organisms → cellular organisms → Bacteria	9062	Open in IMG/M
3300006871\|Ga0075434_100230898	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300006903\|Ga0075426_11177296	Not Available	581	Open in IMG/M
3300006954\|Ga0079219_10472942	Not Available	865	Open in IMG/M
3300009792\|Ga0126374_10799734	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300009792\|Ga0126374_11188436	Not Available	610	Open in IMG/M
3300010046\|Ga0126384_11954624	Not Available	560	Open in IMG/M
3300010048\|Ga0126373_10548145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1204	Open in IMG/M
3300010048\|Ga0126373_12497273	Not Available	576	Open in IMG/M
3300010358\|Ga0126370_10089178	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300010358\|Ga0126370_11954602	Not Available	572	Open in IMG/M
3300010358\|Ga0126370_11994410	Not Available	567	Open in IMG/M
3300010361\|Ga0126378_10035354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4521	Open in IMG/M
3300010361\|Ga0126378_10725391	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300010361\|Ga0126378_11109334	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300010362\|Ga0126377_13183950	Not Available	530	Open in IMG/M
3300010366\|Ga0126379_11195696	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300010376\|Ga0126381_100095102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3789	Open in IMG/M
3300010376\|Ga0126381_100283446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2261	Open in IMG/M
3300010396\|Ga0134126_10089928	All Organisms → cellular organisms → Bacteria → Proteobacteria	3788	Open in IMG/M
3300010397\|Ga0134124_12134940	Not Available	599	Open in IMG/M
3300010398\|Ga0126383_10154745	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300010401\|Ga0134121_10476761	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	1144	Open in IMG/M
3300012971\|Ga0126369_10044578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3748	Open in IMG/M
3300012971\|Ga0126369_10811796	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300012971\|Ga0126369_10874005	Not Available	984	Open in IMG/M
3300014969\|Ga0157376_11576038	Not Available	691	Open in IMG/M
3300015371\|Ga0132258_10026993	All Organisms → cellular organisms → Bacteria	12722	Open in IMG/M
3300016270\|Ga0182036_11152033	Not Available	643	Open in IMG/M
3300016294\|Ga0182041_10205372	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300016319\|Ga0182033_11205454	Not Available	678	Open in IMG/M
3300016319\|Ga0182033_11826629	Not Available	552	Open in IMG/M
3300016341\|Ga0182035_10375798	Not Available	1188	Open in IMG/M
3300016357\|Ga0182032_10986988	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300016357\|Ga0182032_11281328	Not Available	632	Open in IMG/M
3300016371\|Ga0182034_11485954	Not Available	593	Open in IMG/M
3300016387\|Ga0182040_11272039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300016445\|Ga0182038_10926916	Not Available	769	Open in IMG/M
3300017936\|Ga0187821_10219135	Not Available	736	Open in IMG/M
3300017937\|Ga0187809_10059149	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300017947\|Ga0187785_10036564	Not Available	1798	Open in IMG/M
3300017959\|Ga0187779_10016543	All Organisms → cellular organisms → Bacteria → Proteobacteria	4202	Open in IMG/M
3300017959\|Ga0187779_11071142	Not Available	562	Open in IMG/M
3300017972\|Ga0187781_10151371	Not Available	1628	Open in IMG/M
3300017974\|Ga0187777_10019153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4341	Open in IMG/M
3300017974\|Ga0187777_10223374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1273	Open in IMG/M
3300017975\|Ga0187782_10079883	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300017994\|Ga0187822_10222952	Not Available	637	Open in IMG/M
3300018062\|Ga0187784_10135609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2010	Open in IMG/M
3300018062\|Ga0187784_10730424	Not Available	791	Open in IMG/M
3300021560\|Ga0126371_10026380	All Organisms → cellular organisms → Bacteria	5404	Open in IMG/M
3300021560\|Ga0126371_10349202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1614	Open in IMG/M
3300021560\|Ga0126371_13334590	Not Available	543	Open in IMG/M
3300025906\|Ga0207699_10147213	Not Available	1554	Open in IMG/M
3300025929\|Ga0207664_10136592	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	2069	Open in IMG/M
3300025931\|Ga0207644_11383706	Not Available	591	Open in IMG/M
3300025939\|Ga0207665_10090657	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300026078\|Ga0207702_10063673	All Organisms → cellular organisms → Bacteria	3154	Open in IMG/M
3300027874\|Ga0209465_10295460	Not Available	812	Open in IMG/M
3300031544\|Ga0318534_10569780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	644	Open in IMG/M
3300031545\|Ga0318541_10380901	Not Available	788	Open in IMG/M
3300031546\|Ga0318538_10170598	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300031546\|Ga0318538_10192271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	1088	Open in IMG/M
3300031679\|Ga0318561_10693580	Not Available	560	Open in IMG/M
3300031682\|Ga0318560_10300634	Not Available	865	Open in IMG/M
3300031716\|Ga0310813_10945592	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031770\|Ga0318521_10767372	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	587	Open in IMG/M
3300031771\|Ga0318546_10421958	Not Available	933	Open in IMG/M
3300031781\|Ga0318547_10953670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB6	536	Open in IMG/M
3300031819\|Ga0318568_10420479	Not Available	833	Open in IMG/M
3300031819\|Ga0318568_10730158	Not Available	615	Open in IMG/M
3300031833\|Ga0310917_10438104	Not Available	889	Open in IMG/M
3300031859\|Ga0318527_10022969	All Organisms → cellular organisms → Bacteria → Proteobacteria	2243	Open in IMG/M
3300031890\|Ga0306925_11387058	Not Available	694	Open in IMG/M
3300031912\|Ga0306921_10247944	All Organisms → cellular organisms → Bacteria	2087	Open in IMG/M
3300031945\|Ga0310913_10265769	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300032001\|Ga0306922_10514713	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300032009\|Ga0318563_10357310	Not Available	791	Open in IMG/M
3300032060\|Ga0318505_10183168	Not Available	978	Open in IMG/M
3300032076\|Ga0306924_10693063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1145	Open in IMG/M
3300032076\|Ga0306924_11103757	Not Available	864	Open in IMG/M
3300032421\|Ga0310812_10119654	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	1099	Open in IMG/M
3300032770\|Ga0335085_10001605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	46614	Open in IMG/M
3300032782\|Ga0335082_10333895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1385	Open in IMG/M
3300032783\|Ga0335079_11589166	Not Available	643	Open in IMG/M
3300032893\|Ga0335069_11225253	Not Available	820	Open in IMG/M
3300033289\|Ga0310914_11662627	Not Available	542	Open in IMG/M
3300033412\|Ga0310810_10009878	All Organisms → cellular organisms → Bacteria	11068	Open in IMG/M
3300033805\|Ga0314864_0021027	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.65%
Host-Associated	Host-Associated	9.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.85%
Plants	Host-Associated → Plants	9.35%
Aquatic	Environmental → Aquatic	2.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.74%
Freshwater	Environmental → Aquatic → Freshwater	2.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_100067086	3300004633	Tropical Forest Soil	MAASCLASAAAVRHRREDSRAFLLITVAVAMATDTAGVMAATFGSVHYDSGSDQLIVTMIYDGTSPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTETVKIPLANVSCRPATVTLRTAPDFLTSLDVPARP*
Ga0066388_1006954674	3300005332	Tropical Forest Soil	HYDSDSDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTETVKIPLANVSCRPATVTLRTAPDFLTSFDVPARP*
Ga0066388_1073614301	3300005332	Tropical Forest Soil	HYDSDSDQLIVTMIYDGTNPRHDFSIEWGPCRKLDQPGQPAHQTIDLSILDDQWNDAATKTYTQNVRVPLANLSCRPATVTLRTAPDFVMSLDVPARP*
Ga0070671_1004443802	3300005355	Switchgrass Rhizosphere	MGALNFTVGSYKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQADHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP*
Ga0008090_145104691	3300005363	Tropical Rainforest Soil	TSGRPLNFTVRSHGVMATLGLASALGRARRLENSRAFLLIAVAIAMMTDTAVVMAANFGPVRYDPDNDQLIVTMIYDGTNPNHHFSVQWGPCRKLTQPTRQAIDASIVSDQWNDAATKTFTVTVKVPLASLSCRPATVTLRTPPGFYTSLDIPARP*
Ga0070709_101490203	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VNSWWLCAAGAGRQYAPAALGEPMGALNFTVGSYKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPARP
Ga0070713_1005647002	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GEPMGALNFTVGSYKVLATMDLASAPAAARLLEGFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP*
Ga0070710_102561341	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GEPMGALNFTVGSYKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP*
Ga0070711_1002146561	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFHASLEIPARP*
Ga0068856_1002302131	3300005614	Corn Rhizosphere	YKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP*
Ga0066903_1003721114	3300005764	Tropical Forest Soil	MAAFRLASALAVRHRREDSRAFLLIAVAVAMATNTAGVMAATFGSVHYDSDSDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTQTVKIPLANVSCRPATVTLRTAPDFLTSFDVPARP*
Ga0079221_102898442	3300006804	Agricultural Soil	VNSWWLCAAGAGRQYAPAALGEPMGTLNFTVRSYKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTAVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGDCRKVDQPDHAVHQTIEVSILDDQWNDAATKPYSKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP
Ga0075425_10001262319	3300006854	Populus Rhizosphere	VKQRVSLASAPGEWPWLGDVRAFLLIAVAAAMATDSAAVMAASFGSVRYDPSSDQLIVTMIYDGTNPNHHFSIEWGPCRKLDQPARQTIDVSFLDDQWNDAATKTYTKMVRVPLATLSCRPATVTLRTAPDFLTSLDI
Ga0075434_1002308982	3300006871	Populus Rhizosphere	VKQRVSLASAPGEWPWLGDVRAFLLIAVAAAMATDSAAVMAASFGSVRYDPSSDQLIVTMIYDGTNPNHHFSIEWGPCRKLDQPARQTIDVSFLDDQWNDAATKTYTKMVRVPLATLSCRPATVTLRTAPDFLTSLDIPARP*
Ga0075426_111772961	3300006903	Populus Rhizosphere	RAFLLIAVAAAMATDSAAVMAASFGSVRYDPSSDQLIVTMIYDGTNPNHHFSIEWGPCRKLDQPARQTIDVSFLDDQWNDAATKTYTKMVRVPLATLSCRPATVTLRTAPDFLTSLDIPARP*
Ga0079219_104729421	3300006954	Agricultural Soil	VLAIMDLASAPAAARLLERFRAFLLITVIVAMAGGTTTVVAANFGSVSYDSNSDQIIATMIYDGTNPDHHFSMQWGDCRRVDQPAHQTIAVSVLDDQWNDAATKTYTKTVTIPLATLSCRPATVTLRTAPDFSVSLDIPARP*
Ga0126374_107997342	3300009792	Tropical Forest Soil	FGSVHYDSDSDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTETVKIPLANVSCRPATVTLRTAPDFLTSFDVPARP*
Ga0126374_111884362	3300009792	Tropical Forest Soil	LLIAVAVAMATANAAVMAANFEAVRYDKNGDQLIVTMIYDGTKPNHHFSIYWDTCRKDDQPVRQTIGINILDDDHNDAATTTYTEALSVPLATLSCRPATVVLWTPPSSTTSVDIPARP*
Ga0126384_119546241	3300010046	Tropical Forest Soil	LLIAVAVAMATNTAGVMAATFGSVHYDSDSDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTQTVKIPLANVSCRPATVTLRTAPDFLTSFDVPARP*
Ga0126373_105481451	3300010048	Tropical Forest Soil	MATLGLASALGRGRRLEDSRALLLIAVAIAMMTDTAVVMAANFGPVRYDPKGDQLIVTMIYDGTNPNHHFSVEWGACRKLSQPTRQAIDASIVSDQWNDAATQTFTVTVKVPLADLSCRPATVTLRTAPGFYTSLDIPARP*
Ga0126373_124972731	3300010048	Tropical Forest Soil	GLVSAVSGQRRLEALQDFRGCLLIAVAVAMATANAAVMAANFGAVRYDPNGDELIVTMIYDGTKPNHHFSIQWGACRKGQQIDRPAHQTIGVDILDDDHNDAAKNNYTETIKVPLANVSCRPATVTLWTPPSFDRSIDIPSRP*
Ga0126370_100891782	3300010358	Tropical Forest Soil	MAAFRLASALAVRHRREDSRAFLLIAVAVAMATNTAGVMAATFGSVHYDSDSDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTETVKIPLANVSCRPATVTLRTAPDFLTSFDVPARP*
Ga0126370_119546021	3300010358	Tropical Forest Soil	MQPRRSVGPSGERYFTVRSYSVMAILDLASAPAAARLLDHARALLLTTLIVAMTTDTTAVMAANFGAVSYDPSSDQIIATMLYDGTNPDHHFSIQWGNCRKVDQPNHAAHQTIDVSILDDQWNDAATKTYTKTVRVPLGALTCRPATVTLRTAPDFYESLEVPARP*
Ga0126370_119944101	3300010358	Tropical Forest Soil	MATDTAGVMAATFGSVHYDSGSDQLIVTMIYDGTSPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTETIRVPLANLSCRPAAVTLRTAPDFFTSLDIPARP*
Ga0126378_100353545	3300010361	Tropical Forest Soil	MATLGLASALGRGRRLEDSRALLLIAVAIAMMTDTAVVMAANFGPVRYDPNSDQLIVTMIYDGTNPNHHFSVEWSPCRKLSQPTRQAIDASIVSDQWNDAATQTFTVTVKVPLADLSCRPATVTLRTAPGFYTSLDIPARP*
Ga0126378_107253912	3300010361	Tropical Forest Soil	MATATAAVMAASFGPVRYDPSRDELVVTMIYDGTNPDHHFSVQWGPCRKVDQQDHQAHQMIEVSVLDDQWNDTATKTYTKTVKVPLATLSCRPATVTLRTAPDFYESLDIPARP*
Ga0126378_111093341	3300010361	Tropical Forest Soil	LLIAVAVAMATNTAGVMAATFGSVHYDSDSDQLIVTMIYDGTNPNHHCSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTQTVKIPLANVSCRPATVTLRTAPDFLTSFDVPARP*
Ga0126377_131839501	3300010362	Tropical Forest Soil	DPAAVMAAAFGSVHYDSDSDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPGQSAHQTIDVSILDDQWNDAATKSYTQTVRVPLANLSCRPATVTLRTAPDFVTSLDVPARP*
Ga0126379_111956962	3300010366	Tropical Forest Soil	ALAVRHRREDSRAFLLIAVAVAMATNTAGVMAATFGSVHYDSDSDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTQTVKIPLANVSCRPATVTLRTAPDFLTSFDVPARP*
Ga0126381_1000951022	3300010376	Tropical Forest Soil	MATLGLASALGRGRRLEDSRALLLIAVAIAMMTDTAVVMAANFGPVRYDPNSDQLIVTMIYDGTNPNHHFSVEWGACRKLSQPTRQAIDASIVSDQWNDAATQTFTVTVKVPLADLSCRPATVTLRTAPGFYTSLDIPARP*
Ga0126381_1002834464	3300010376	Tropical Forest Soil	LLIAVAVAMATNTAGVMAATFGSVHYDSDSDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTETVKIPLANVSCRPDTVTLRTAPDFLTSLDVPARP*
Ga0126381_1051050791	3300010376	Tropical Forest Soil	VAATLGLVSVLSGQRRLEALQDFRGCLLIAVAVAMATANAAVMAANFGAVRYDPNGDQLIVTMIYDGTKPNHHFSIQWGACRKGQQIDRPEHQTIGVDILDDDHNDAAMKS
Ga0134126_100899284	3300010396	Terrestrial Soil	MGALNFTVGSYKVLATMDLASAPAAARLLERFRVFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQADHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP*
Ga0134124_121349401	3300010397	Terrestrial Soil	SYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVSLATLSCRPATVTLRTAPDFQASLEIPGRP*
Ga0126383_101547451	3300010398	Tropical Forest Soil	MATDPAAVMAAAFGSVHYDSDSDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPGQPAHQTIDLSILDDQWNDAATKSYTQTVRVPLANLSCRPATVTLRTAPDFVTSLDVPARP*
Ga0134121_104767613	3300010401	Terrestrial Soil	MGALNFTVGSYKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP*
Ga0126369_100445788	3300012971	Tropical Forest Soil	MATDTAGVMAATFGSVHYDSGSDQLIVTMIYDGTSPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTETVKIPLANVSCRPATVTLRTAPDFLTSLDVPARP*
Ga0126369_108117962	3300012971	Tropical Forest Soil	MANFRLASAPGVRRRREGFRTFPVIAVAVAMTTDTAAVMAAAFGSAHYDPDSDQLIVTMIYEGTNPNHHFSIQWGQCQKVDQPGQPAHQAIDVSVLDDQWNDAATKTYTETIRVPLANLSCRPAAVTLRTAPDFFTSLDIPARP*
Ga0126369_108740051	3300012971	Tropical Forest Soil	MAAPLGLTSALGGQRRLDDFRSCLLIAAAVAMATASAAVMAATFGPVRYDPNGDQLVVTMIYDGTKPDHHFSIYWDTCRKDDQPVRQTIGINILDEGHNDAATKTYTETLRVPLATLSCRPATVVLWTPPSSTTSVDIPARP*
Ga0157376_115760381	3300014969	Miscanthus Rhizosphere	LLIAFAVAMAAATSAVIAATFGPVRYDPNGDQLIVTMIYDGTHPNHRFTIHWDTCRKVELVGQPEHVTGVNILDDDYNDAANKPYTETIKMPLANLSCRPATVWLWTPPSSTTSVDIPARP*
Ga0132258_1002699324	3300015371	Arabidopsis Rhizosphere	MKASLGLASALGGGCWLEESRAFLLIAVAVAMATNAASVMAASFGPVRYDPNSDQLIVTMIYDGTNPNHHFSIEWGPCRKLDQPAHQTIDVSILDDQWNDAATKTYTETVRVPLATLSCRPATVTLRTAPDFLTSLDIPARP*
Ga0132255_1034869991	3300015374	Arabidopsis Rhizosphere	MKASLGLASALGGGCWLEESRAFLLTAVAVAMATNAASVMAASFGPVRYDPNSDQLIVTMIYDGTNPNHHFSIEWGPCRKLDQPARQTIDVSFLDDQWNDAATKT
Ga0182036_111520332	3300016270	Soil	MATLGLASALGERRRLGHSRAFLLTAVTGAMAMDTAAVVAANFGSVHYDPNSDQLIVTMIYDGTNPDHHFSIQWGPCHKVDQPDQPAHQIIDVSILDDQWNDAATKSYTKTVKVPLASLSCRPATVTLRTAPDFYASIDVPARP
Ga0182041_102053721	3300016294	Soil	VKAILGLASMLCGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMKTYTEIVKVPLATLSCRPATVTLRTAPDFITSLAIPARP
Ga0182033_112054542	3300016319	Soil	ATLGLASALGERRRLGHSRAFLLTAVTGAMAMDTAAVVAANFGSVHYDPNSDQLIVTMIYDGTNPDHHFSVQWGRCRKANQSDQPAQQTIVASILDDQWNDAAASTYTTTVKVPLATLSCRPATVTLRTAPDFYTSVDIPAKP
Ga0182033_118266291	3300016319	Soil	MATTLTSALRGQRRLEDFCGYFLIAGSVAMATASAAVMAATFGPVHYDPKGDQLIVTMIYDGSKPNHHFSIQWDTCRKGEQLDRPAHQTIAVNILDDDHNDAANKTYTETIRVPLANLSCRPATVTLWTPPDFTTSVDIPGRP
Ga0182035_103757983	3300016341	Soil	ATMADTFGPVRYDPNSDHLIVTMIYDGTNPDHHVSVQWGRCRKANQSDQPAQQTIVASILDDQWNDAAASTYTTTVKVPLATLSCRLATVTLRTAPDFYTSVDIPAKP
Ga0182032_109869882	3300016357	Soil	VKATLGLASMLGGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMKTYTEIVKVPLATLSCRPATVTLRTAPDFITSLAIPARP
Ga0182032_112813282	3300016357	Soil	DTAATMADTFGPVRYDPNSDQLIVTMIYDGTNPDHHFSVQWGRCRKANQSDQPAQQTIVASILDDQWNDAAASTYTTTVKVPLATLSCRPATVTLRTAPDFYTSVDIPAKP
Ga0182034_114859541	3300016371	Soil	MATLGSGSALRGKRRVQHARTFLLFAVTVAIVTDATATMADTFGPVRYDPNSDQLIVTMIYDGTNPDHHFSVQWGRCRKANQSDQPAQQTIVASILDDQWNDAAASTYTTTVKVPLATLSCRPATVTLRTAPDFYTS
Ga0182040_112720392	3300016387	Soil	LTAVTGAMAMDTAAVVAANFGSVHYDPNSDQLIVTMIYDGTNPDHHFSIQWGPCRKLDQPDQRVHQTIDVSILDDQWNDAATKSYTKTVRVPLASLSCRPATVTLRTAPDFYASIDVPAR
Ga0182037_113272111	3300016404	Soil	MATLGLASALGERRRLGHSRAFLLTAVTGAMAMDTAAVVAANFGSVHYDPNSDQLIVTMIYDGTNPDHHFSIQWGPCHKVDQPDQPAHQIIDVSILDDQWNDAATKSYTKTVR
Ga0182038_109269161	3300016445	Soil	MATLGSGSALRGKRRVQHSRTFLLFAVTVAIVTDTAATMADTFGPVRYDPNSDQLIVTMIYDGTNPDHHFSVQWGRCRKANQSDQPAQQTIVASILDDQWNDAAASTYTTTVKVPLATLSCRPATVTLRTAPDFYTSVDIPAKP
Ga0187821_102191351	3300017936	Freshwater Sediment	MTTGAALVRAASFGSVHYDPGSDQLIVTVIYDGTNSNHHFSIQWGPCRKLEQPDQPAHQTIDVNILDDQWNDAATKTYTETVKVPLASLSCRPATVTLRTAPDFIASLEIPARP
Ga0187809_100591491	3300017937	Freshwater Sediment	LEGSRTFLLIAAAVATVTDIAPVMAATFGPVRYDPNSDQLIVIMIYDGTNPDHHFSIQWGPCRKLDQPAHQTIDVSILDDQWNDAATKTYTETVTVPLASLSCRPATVTLRTAPDFVTSLDIPARP
Ga0187785_100365644	3300017947	Tropical Peatland	MATLDLASAPAAAPLLEHTRAFLLTTLIVAMTTDTTAVMAANFGAVSYDPSSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPNHPAHQTIDVSILDDQWNDAATKPYTKTVKVPLATLACRPATVTLRTAPDFYASLEIPARP
Ga0187779_100165432	3300017959	Tropical Peatland	MATLGLASALGRGRRLEDSRACLLIAVAIAMMTDTAIVMAANFGPVRYDPDGDQLIVTMIYDGTNPNHHFSVQWGPCRKLTGPTRQIIDASIVGDQWNDAATKTFTVTVKVPLANLSCRPATVTLRTPPGFYKSLDIPARP
Ga0187779_110711421	3300017959	Tropical Peatland	RPLNFTVRSHGVAATLGLASALSGQRRLEDFRGCLLIAVAVAMATANAAVMAATFGPVRYDPNGDQLIVTMIYDGTNPNHHFSIRWGTCRKGEQIDQPAHQTIGVDILDDDYNDAAKKTYTETIRVPLANSSCRPATVTLWTPPNFSTSFDIPTRPRLLTIVGGGREAL
Ga0187781_101513714	3300017972	Tropical Peatland	MAATLGLASALSGQRRLENFRSCLLIAVAVAMATVNATVMAASFGAVRYDPSGDQLIVTMIYDGTKPNHHFSIHWDTCRKDDQPVRQTIGVNILDDDYNDAATKTYTETLTVPIATLSCRPATVVLWTPPRSTTSVDIPARP
Ga0187777_100191535	3300017974	Tropical Peatland	MATLDLASASAGARLLQHSRAFLLVTVIVAMTTGTTAVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFHASLEIPARP
Ga0187777_102233743	3300017974	Tropical Peatland	MATLGLASALGRGRRLEDSRACLLIAVAIAMMTDTAIVMAANFGPVRYDPDGDQLIVTMIYDGTNPNHHFSVQWGPCRKLTGPTRQIIDASIVGDQWNDAATKTFTVTVKVPLANLSCRPATVTLRTPPGLYT
Ga0187782_100798831	3300017975	Tropical Peatland	VAATMGLASVLNGQRRLEGLRGCLLITVAVAMATANAAVMAATFGPVRYDPNSDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNVLDDDYNDSATNSYTETIRVPLANLSCRPATVMLWTPPNFSTSVDIPARP
Ga0187822_102229522	3300017994	Freshwater Sediment	YKVLATMDLASAPAAARLLERFRAFLLITVIVAMTTGATAVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWDDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFHASLEIPARP
Ga0187784_101356091	3300018062	Tropical Peatland	VAATMGLASVLNGQRRLEGLRGCLLIAVAVAMATANAAVMAATFGPVRYDPNSDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNVLDDDYNDSATNSYTETIRVPLANLSCRPATVMLWTPPNFSTSVDIPARP
Ga0187784_107304242	3300018062	Tropical Peatland	MAATLGLASALSGQRRLENFRSCLLIAVAVAMATVNATVMAATFGAVRYDPSGDQLIVTMIYDGTKPNHHFSIHWDTCRKDDQPVRQTIGVNILDDDYNDAATKTYTETLTVPIATLSCRPATVVLWTPPRSTTSVDIPARP
Ga0126371_100263809	3300021560	Tropical Forest Soil	MAAFRLASALAVRHRREDSRAFLLIAVAVAMATNTAGVMAATFGSVHYDSDSDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTQTVKIPLANVSCRPATVTLRTAPDFLTSFDVPARP
Ga0126371_103492023	3300021560	Tropical Forest Soil	MATLGLASALGRGRRLEDPRALLLLAVAIAMMTDTAVVMAANFGPVRYDPNSDQLIVTMIYDGTNPNHHFSVEWGPCRKLSQPTRQAIDASIVSDQWNDAATQTFTVTVKVPLADLSCRPATVTLRTAPGFYTSLDIPARP
Ga0126371_133345901	3300021560	Tropical Forest Soil	NGLRVRAADAGRQRVPAALDRRFWAAPQLTVRSHGVAATLGLVSALSGQRRLEALQDFRGCLLIAVAVAMATANAAVMAANFEAVRYDPNGDQLIVTMIYEGTKPNHHFSIKWGACRKGQQIDRPTHQTIGVDILDDDHNDAAKKTYTETLKVPLANLSCRPATVTLWTPPSFDRSVVIP
Ga0207699_101472133	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VNSWWLCAAGAGRQYAPAALGEPMGALNFTVGSYKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQADHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP
Ga0207664_101365924	3300025929	Agricultural Soil	VNSWWLCAAGAGRQYAPAALGEPMGALNFTVGSYKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQ
Ga0207644_113837061	3300025931	Switchgrass Rhizosphere	VNSWWLCAAGAGRQYAPAALGEPMGALNFTVGSYKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQADHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQES
Ga0207665_100906573	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VNSWWLCAAGAGRQYAPAALGEPMGTLNFTVRSYKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP
Ga0207702_100636731	3300026078	Corn Rhizosphere	YKVLATMDLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP
Ga0209465_102954601	3300027874	Tropical Forest Soil	MAASCLASAAAVRHRREDSRAFLLITVAVAMATDTAGVMAATFGSVHYDSGSDQLIVTMIYDGTSPNHHFSIQWGPCRKLDQPGQPAHQTIDVSILDDQWNDAATKTYTETVKIPLANVSCRPA
Ga0318534_105697801	3300031544	Soil	MRHNFWAPQLIVATGAMVTATTALMAASFGPVRYDPSTDELVVTMIYDGTNPDHHFSLEWGPCRKVDQKDQQAHQLIDLSILDDQWNDAATKSYTKTVRVPLATLSCRPATVTLRTAPDFYESVNIPARP
Ga0318541_103809012	3300031545	Soil	MATLGLASALGERRRLGHSRAFLLTAVTGAMAMDTAAVVAANFGSVHYDPNSDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNILDDDHNDAAKKAYTETLRVPLANLSCRPATVTLWTPPNFSTSFDIPASHQ
Ga0318538_101705983	3300031546	Soil	FGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMTTYTEIVKVPLATLSCRPATVTLRTAPDFITSLAIPARP
Ga0318538_101922713	3300031546	Soil	IAVAVAMATANAAVMAATFGAVRYDPNGDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNILDDDHNDAAKKAYTETLRVPLANLSCRPATVTLWTPPNFSTSFDIPASH
Ga0318561_106935802	3300031679	Soil	LGGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMTTYTEIVKVPLATLSCRPATVTLRTAPDFITSLAIPARP
Ga0318560_103006341	3300031682	Soil	VLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMKTYTEIVKVPLATLSCRPATVTLRTAPDFITSLAIPARP
Ga0310813_109455921	3300031716	Soil	DLASAPAAARLLERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP
Ga0306918_114005491	3300031744	Soil	MATLGLASALGERRRLGHSRAFLLTAVTGAMAMDTAAVVAANFGSVHYDPNSDQLIVTMIYDGTNPDHHFSIQWGPCHKVDQPDQPAHQIIDVSILDDQWND
Ga0318521_107673722	3300031770	Soil	MRHNFWAPQLIVATGAMVTATTALMAASFGPVRYDPSTDELVVTMIYDGTNPDHHFSLEWGPCRKVDQKDQQAHQLIDLSILDDQWNDAATKSYTKTVRVPLATLSCRPAT
Ga0318546_104219582	3300031771	Soil	FGAVRYDPNGDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNILDDDHNDAAKKAYTETLRVPLANLSCRPATVTLWTPPNFSTSFDIPASHQ
Ga0318547_109536702	3300031781	Soil	VKATLGLASMLGGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMKTYTEIVKVPLA
Ga0318568_104204792	3300031819	Soil	GRLKGFRACLLIAVAVAMATANAAVMAATFGAVRYDPNGDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNILDDDHNDAAKKAYTETLRVPLANLSCRPATVTLWTPPNFSTSFDIPASHQ
Ga0318568_107301582	3300031819	Soil	VKAILGLASMLGGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMKTYTEIVKVPLATLSC
Ga0310917_104381041	3300031833	Soil	TAAAMADTFGPVSYDPSSDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNILDDDHNDAAKKAYTETLRVPLANLSCRPATVTLWTPPNFSTSFDIPASHQ
Ga0318527_100229694	3300031859	Soil	MATANAAVMAATFGAVRYDPNGDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNILDDDHNDAAKKAYTETLRVPLANLSCRPATVTLWTPPNFSTSFDIPASHQ
Ga0306925_113870581	3300031890	Soil	MATLGLASALGERRRLGHSRAFLLTAVTGAMAMDTAAVVAANFGSVHYDPNSDQLIVTMIYDGTNPDHHFSIQWGPCHKVDQPDQPAHQIIDVSILDDQWNDAATKSYTKTVRVPLATLSCRPATVTLRTAPDFYESVNIPARP
Ga0306921_102479442	3300031912	Soil	VKAILGLASMLGGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMTTYTEIVKVPLATLSCRPATVTLRTAPDFITSLAIPARP
Ga0310913_102657692	3300031945	Soil	VKAILGLASMLGGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMKTYTEIVKVPLATLSCRPATVTLRTAPDFITSLAIPALP
Ga0306922_105147132	3300032001	Soil	VKAILGLASMLGEGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMKTYTEIVKVPLATLSCRPATVTLRTAPDFITSLAIPARP
Ga0318563_103573102	3300032009	Soil	DPNGDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNILDDDHNDAAKKAYTETLRVPLANLSCRPATVTLWTPPNFSTSFDIPASHQ
Ga0318533_101885101	3300032059	Soil	VKAILGLASMLGGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMTTYTEIV
Ga0318505_101831683	3300032060	Soil	VAATLGLASALSGQGRLKDFRACLLIAVAVATANAAVMAATFGAVRYDPNGDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNILDDDHNDAAKKAYTETLRVPLANLSCRPATVTLWTPPNFSTSFDIPASHQ
Ga0306924_106930632	3300032076	Soil	VKAILGLASMLGGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMKTYTEIVKVPLATLSCRPATVTLRTAPDFITSLAIPARP
Ga0306924_111037572	3300032076	Soil	VAMATANAAVMAATFGAVRYDPNGDQLIVTMIYDGTKPNHHFSIQWGTCRKGEQLDQPAHQTIGVNILDDDHNDAAKKAYTETLRVPLANLSCRPATVTLWTPPNFSTSFDIPASHQ
Ga0310812_101196541	3300032421	Soil	VNSWWLCAAGAGRQYAPAFGEPMGALNFTVGSYKVLATMDLASAPAAARLFERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTA
Ga0335085_1000160535	3300032770	Soil	VATTLGLASALSGQRRREGFRGCLLIAVAVAMATANAAVMAATFGPVHYDSNGDQLVVTMIYDGSKPNHHFSIHWDTCRKGEQLDRPAHQTIGVNILDDDHNDAANKTYTETIRVALANLSCRPATVTLWTPPDFTTSVDIPARP
Ga0335082_103338953	3300032782	Soil	AMATANAAVMAATFGPVHYDSNGDQLVVTMIYDGSKPNHHFSIHWDTCRKGEQLDRPAHQTIGVNILDDDHNDAANKTYTETIRVALANLSCRPATVTLWTPPDFTTSVDIPARP
Ga0335079_115891661	3300032783	Soil	VNGWWLCAAGAGRQYAPAAPGEPMRALNFTVRSHKVMATLDLASAPPGAHLLEHSRAFLPITVIVAMTTGTTAVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQPDHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFHASLEIPARP
Ga0335069_112252532	3300032893	Soil	MAPRGLVFALSGKRRLKDSRGFLLIAFAVAMATDTDAVMADRFGPVRYDPKNDELIVTMIYDGTNPNHHFSIQWGGCKVAQPAKQIIELSILDDQRNDAATKTYTETVRVPLATLSVGQQ
Ga0310914_116626271	3300033289	Soil	VKAILGLASMLGGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMKTYTEIVKVPLATLSCRPATVTLRTAPDFITSLAIP
Ga0318519_102700021	3300033290	Soil	VKAILGLASMLGGGRRLGDARAVLLIAVAVAMATDTAPVRAASFGTVRYDPNGDQLIVTMIYDGTNPNHHFSIQWGPCRKLDQPDQRGHQTIDVSILDEQWNDAAMKTYTEIVK
Ga0310810_1000987815	3300033412	Soil	VNSWWLCAAGAGRQYAPAFGEPMGALNFTVGSYKVLATMDLASAPAAARLFERFRAFLLITVIVAMASGTTTVVAANFGSVSYDPNSDQIIATMIYDGTNPDHHFSIQWGNCRKVDQADHAVHQTIDVSILDDQWNDAATKPYTKTVRVPLATLSCRPATVTLRTAPDFQASLEIPGRP
Ga0314864_0021027_250_687	3300033805	Peatland	VAATLGLASALSGQRRLEDFRGCLLIAVAVAMATANAAVMAATFGPVRYDPNGDQLIVTMIYDGTNPNHHFSIRWGPCRKGEQIDQPAHQTIGVDILDDDYNDAAKKTYTETIRVPLANSSCRPATVTLWTPPNFSTSFDIPTRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091601

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences