Metagenome / Metatranscriptome Family F091600

Overview

Basic Information

• Family ID: F091600
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 107
• Average Sequence Length: 98 residues
• Representative Sequence: MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
• Number of Associated Samples: 93
• Number of Associated Scaffolds: 107

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 29.52 %
• % of genes near scaffold ends (potentially truncated): 62.62 %
• % of genes from short scaffolds (< 2000 bps): 82.24 %
• Associated GOLD sequencing projects: 82
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (74.766 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.495 % of family members)
• Environment Ontology (ENVO): Unclassified (37.383 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (61.682 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 10.78%
  β-sheet: 53.92%
  Coil/Unstructured: 35.29%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00480	ROK	48.60
PF09084	NMT1	14.02
PF02653	BPD_transp_2	4.67
PF00005	ABC_tran	1.87
PF01964	ThiC_Rad_SAM	0.93
PF00528	BPD_transp_1	0.93
PF13407	Peripla_BP_4	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	97.20
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	14.02
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	14.02
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.77 %
Unclassified	root	N/A	25.23 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.77 %
Unclassified	root	N/A	25.23 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.77 %
Unclassified	root	N/A	25.23 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.83 %
Unclassified	root	N/A	25.23 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73.83 %
Unclassified	root	N/A	25.23 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	72.90 %
Unclassified	root	N/A	25.23 %

Level 7

Name	Rank	Taxonomy	Distribution
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	42.06 %
Unclassified	root	N/A	25.23 %

Level 8

Name	Rank	Taxonomy	Distribution
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	0.93 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	42.06 %
Unclassified	root	N/A	25.23 %

Level 9

Name	Rank	Taxonomy	Distribution
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	11.21 %
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	0.93 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	26.17 %
Unclassified	root	N/A	25.23 %

Level 10

Name	Rank	Taxonomy	Distribution
Amycolatopsis rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis rhizosphaerae	11.21 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples	1.87 %
Gordonia polyisoprenivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia polyisoprenivorans	0.93 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	8.41 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	0.93 %
Unclassified	root	N/A	25.23 %

Level 11

Name	Rank	Taxonomy	Distribution
Amycolatopsis rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis rhizosphaerae	11.21 %
Gordonia polyisoprenivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia polyisoprenivorans	0.93 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	8.41 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	0.93 %
Unclassified	root	N/A	25.23 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1.87 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300005093|Ga0062594_101109944	Not Available	774
3300005329|Ga0070683_100100584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2721
3300005330|Ga0070690_100422820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	983
3300005330|Ga0070690_101060564	Not Available	641
3300005336|Ga0070680_101106408	Not Available	685
3300005337|Ga0070682_100618997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857
3300005339|Ga0070660_100681305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	861
3300005340|Ga0070689_101520004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis rhizosphaerae	607
3300005344|Ga0070661_100795654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776
3300005356|Ga0070674_100090013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	2212

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.14%
Host-Associated	Host-Associated	44.86%

Class

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	44.86%
Terrestrial	Environmental → Terrestrial	55.14%

Category

Habitat	Taxonomy	Distribution
Phylloplane	Host-Associated → Plants → Phylloplane	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.10%
Soil	Environmental → Terrestrial → Soil	55.14%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	14.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.69%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.93%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	14.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.48%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062594_1011099442	3300005093	Soil	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV*
Ga0070658_102626362	3300005327	Corn Rhizosphere	QSVDVEFGRLERTLRVAPIEPAAVTLSARGDTARVATGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0070683_1001005842	3300005329	Corn Rhizosphere	VLAPLCVPPAFATIPRMRQLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV*
Ga0070690_1004228202	3300005330	Switchgrass Rhizosphere	PMRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV*
Ga0070690_1010605641	3300005330	Switchgrass Rhizosphere	MRRLAPLLLLPLVLATACTSHTSRCVNDTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVR
Ga0070680_1011064082	3300005336	Corn Rhizosphere	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPA*
Ga0070682_1006189972	3300005337	Corn Rhizosphere	VLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0070660_1006813051	3300005339	Corn Rhizosphere	VLATACTSHTSRCVNDTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0070689_1015200042	3300005340	Switchgrass Rhizosphere	LAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV*
Ga0070661_1007956542	3300005344	Corn Rhizosphere	NGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV*
Ga0070661_1016108722	3300005344	Corn Rhizosphere	LFARIPLMRRFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0070674_1000900131	3300005356	Miscanthus Rhizosphere	CTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV*
Ga0070659_1000894372	3300005366	Corn Rhizosphere	MRRLAPLLLLPLVLATACTSHTSRCVNDTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0070659_1001552923	3300005366	Corn Rhizosphere	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV*
Ga0070709_112207261	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SHTSRCTNGACAINLTGEQSLVVEFGRLERTLRVSPIEPTAVTLSARGDSARVPAGGSAEVGDLAVNVISIAGRDVQLTVRPA*
Ga0070714_1005317171	3300005435	Agricultural Soil	VAAGCTATSHTSRCTNGACAINLTGEQSLDVEFGRLERTLRVSPIEPTAVTLSARGDSARVPAGGSAEVGDLAVNVISIAGRDVQLTVRPA*
Ga0070714_1021718281	3300005435	Agricultural Soil	MRRITLIPLPVVLAAGCTATSHVSHCTNGTCAISLTGEQTLDVEFGSLERNLRVAPIEASAVTLSARGDSERVPAGGSATVGDLAVHVISIAGSDVELAVSPA*
Ga0070663_1001017293	3300005455	Corn Rhizosphere	CTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0070663_1018230422	3300005455	Corn Rhizosphere	CTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPAAVTLSARGDTARVATGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0070696_1004098842	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVR
Ga0070704_1016157022	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV*
Ga0070664_1000833402	3300005564	Corn Rhizosphere	MRRFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0068857_1003045572	3300005577	Corn Rhizosphere	MRRFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPAAVTLSARGDTARVATGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0068859_1017320231	3300005617	Switchgrass Rhizosphere	GGCTATSHTSRCTNGTCAISLSGEQSLDVEVGRLERTLRVSPIEPTAVTVSARGDSARVPAGGSAEVGDLAVRVDSIAGRDVELTVGPA*
Ga0068870_105177632	3300005840	Miscanthus Rhizosphere	MLASLRVHRSVGEAYPMRRLVLLLLLALSLVVAGGCTATSHTSRCTNGTCAISLSGEQSLDVEVGRLERTLRVSPIEPTAVTVSARGDSARVPAGGSAEVGDLAVRVDSIAGRDVELTVGPA*
Ga0068860_1004610901	3300005843	Switchgrass Rhizosphere	SRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSSRGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPV*
Ga0070717_102367621	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLALLALPLVVAAGCTATSHTSRCTNGACAINLTGEQSLDVEFGRLERTLRVSPIEPTAVTLSARGDSARVPAGGSAEVGDLAVNVISIAGRDVQLTVRPA*
Ga0079221_106169622	3300006804	Agricultural Soil	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRVERTLCVAPIEPTAVTLSARGDSARVPSGETVEVGGLKVQVVSIAG
Ga0075428_1015847271	3300006844	Populus Rhizosphere	LAPLCVPPAFATIPRMRQLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSSRGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA*
Ga0105245_106660061	3300009098	Miscanthus Rhizosphere	DDTTPGGSRTRIDMLASLRVHRSVGEAYPMRRLVLLLLLALSLVVAGGCTATSHTSRCTNGTCAISLSGEQSLDVEVGRLERTLRVSPIEPTAVTVSARGDSARVPAGGSAEVGDLAVRVDSIAGRDVELTVGPA*
Ga0075418_116845461	3300009100	Populus Rhizosphere	LVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSSRGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA*
Ga0105247_100621601	3300009101	Switchgrass Rhizosphere	LPLVLATACTSHTSRCVNDTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0111538_107869402	3300009156	Populus Rhizosphere	MRQLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSSRGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA*
Ga0134125_102250861	3300010371	Terrestrial Soil	NGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV*
Ga0134128_102859393	3300010373	Terrestrial Soil	MLASLRVHRSVGEAYPMRRLVLLLLLALSLVVAGGCTATSHTSRCTNGTCAISLSGEQSLDVEVGRLERTLRVSPIEPTAVTVSARGDSARLPAGGSAEVGDLAVRVD
Ga0134126_117717802	3300010396	Terrestrial Soil	MRQLAPLLLLPLVLATGCTSHTSRCVHGTCAISLSGEQSVDVEFGRLERSLRVAPIEPMAVTLSARGDSARVHTGETAQVGGLAVRVVSIAGRDVALTVSPA*
Ga0134124_119963162	3300010397	Terrestrial Soil	MRRFAPLLLLPLVLVTACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPAAVTLSARGDTARVATGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0134124_126233831	3300010397	Terrestrial Soil	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVTTGSVGEVGGLAVQVVSIA
Ga0134127_110542602	3300010399	Terrestrial Soil	PLMRRFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPAAVTLSARGDTARVATGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0134122_103819012	3300010400	Terrestrial Soil	MRQLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVASGGVSEVGGLQVQVVSIAGRDVQLTVRPA*
Ga0134121_102071433	3300010401	Terrestrial Soil	LATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPAAVTLSARGDTARVATGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0151490_11588491	3300011107	Soil	MRRLALFTLLIPAAVLAAGCTATSHVSHCTNTTCAISLTGEQTLDVAFGPLERNLRVAPIEPNAVTVSARGDSERVPTGGSATVGDLAVRVVSISGRDVELAVRPA*
Ga0105246_107961141	3300011119	Miscanthus Rhizosphere	GTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA*
Ga0157290_104105121	3300012909	Soil	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVTTGSVGEVGGLAVQVVSIAGRDVQLTVRP
Ga0157301_103143611	3300012911	Soil	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSTRGDSARVPTGGVGEVGGLAVQVVSMAGRDVQLTVRPV*
Ga0164298_103088602	3300012955	Soil	MRQLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA*
Ga0164304_102584782	3300012986	Soil	MRRFAPLLLLPLVLLTACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGPDVQLTVRPA*
Ga0164304_113778011	3300012986	Soil	MRRLALLALPLVVAAGCTATSHTSRCTNGACAINLTGEQSLDVEFGRLERILRVSPIEPTAVTLSARGDSARVPAGGSAEVGDLAV
Ga0164307_108439241	3300012987	Soil	MRRFAPLLLLPLVLLTACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLE
Ga0164306_105238051	3300012988	Soil	RFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGPDVQLTVRPA*
Ga0157380_115702262	3300014326	Switchgrass Rhizosphere	CTSHTSRCVNDTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA*
Ga0157377_106726922	3300014745	Miscanthus Rhizosphere	MLASLRVHRSVGEAYPMRRLVLLLLLALSLVVAGGCTATSHTSRCTNGTCAISLSGEQSLDVEVGRLERTLRVSPIEPTAVTVSARGDSARVPAGGSAEVGDLAVRVDSIAGRDVEL
Ga0173483_109639341	3300015077	Soil	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGL
Ga0132258_103819602	3300015371	Arabidopsis Rhizosphere	MRRLALLSLLAVPLVVATGCTATSQTSRCTNGACAISLTGEQSLDVEFGGLERTLRVAPIEPTAVTLSARGDSARVPAGGSAEVGDLAVRVLSIAGRDVELTVSPA*
Ga0132256_1032633111	3300015372	Arabidopsis Rhizosphere	MRRLARSALVLPALLVPAVLAVGCTATSHVTHCTNAACSISLTGEQTVGVEFGPLERDLRVSPIEPGAVTLSAHGASERVPAGGSATVGGLAVRVVSISGRDVELAVMPA*
Ga0132257_1025664161	3300015373	Arabidopsis Rhizosphere	MRQLAPLLLLPLVLATGCTSHTRRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPAAVTLSARGDTARVATGSVGEVGGLEVQVVSIAGRDVQLTV
Ga0132255_1044415932	3300015374	Arabidopsis Rhizosphere	MRRLALLSLLAVPLVVATGCTATSQTSRCTNGACAISLTGEQSLDVEFGGLERTLRVAPIEPTAVTLSARGDSARVPAGGSAEVGDLAVRVLS
Ga0190266_102480901	3300017965	Soil	APLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPV
Ga0190270_120322221	3300018469	Soil	MRRLALLLVLPLVIVAGCQATSHTSRCTNGTCAISLTGEQSVDVEFGRLERTLRVAPIEQTAVTLSARGDSARVPAGSFAEVGGLEVQVVSI
Ga0190267_107703132	3300019767	Soil	CTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0207642_105010722	3300025899	Miscanthus Rhizosphere	LLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0207642_108220791	3300025899	Miscanthus Rhizosphere	MRRLAPLLLLPLVLATACTSHTSRCVNDTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA
Ga0207688_100232381	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV
Ga0207680_105051232	3300025903	Switchgrass Rhizosphere	MRRLAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPAAVTLSARGDTARVATGSVGEVGGLEVQVVSIAGRDVQLTVRPA
Ga0207643_100068673	3300025908	Miscanthus Rhizosphere	MRRFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPAAVTLSARGDTARVATGSVGEVGGLEVQVVSIAGRDVQLTVRPA
Ga0207643_102093641	3300025908	Miscanthus Rhizosphere	TRIDMLASLRVHRSVGEAYPMRRLVLLLLLALSLVVAGGCTATSHTSRCTNGTCAISLSGEQSLDVEVGRLERTLRVSPIEPTAVTVSARGDSARVPAGGSAEVGDLAVRVDSIAGRDVELTVGPA
Ga0207643_108461571	3300025908	Miscanthus Rhizosphere	SHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV
Ga0207705_105872572	3300025909	Corn Rhizosphere	GCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV
Ga0207662_100132442	3300025918	Switchgrass Rhizosphere	MRQLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV
Ga0207657_101030063	3300025919	Corn Rhizosphere	PLMRRLAPLLLLPLVLATACTSHTSRCVNDTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA
Ga0207649_107468342	3300025920	Corn Rhizosphere	MRRLAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA
Ga0207649_114388212	3300025920	Corn Rhizosphere	LLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV
Ga0207687_104467312	3300025927	Miscanthus Rhizosphere	DDTTPGGSRTRIDMLASLRVHRSVGEAYPMRRLVLLLLLALSLVVAGGCTATSHTSRCTNGTCAISLSGEQSLDVEVGRLERTLRVSPIEPTAVTVSARGDSARVPAGGSAEVGDLAVRVDSIAGRDVELTVGPA
Ga0207664_104019681	3300025929	Agricultural Soil	VAAGCTATSHTSRCTNGACAINLTGEQSLDVEFGRLERTLRVSPIEPTAVTLSARGDSARVPAGGSAEVGDLAVNVISIAGRDVQLTVRPA
Ga0207690_106791962	3300025932	Corn Rhizosphere	MRRLAPLLLLPLVLATACTSHTSRCVNDTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPV
Ga0207706_113514821	3300025933	Corn Rhizosphere	GPAALSASERGLPRVSAMIRHRGVPAPRIDMLASLRVHRSVGEAYPMRRLVLLLLLALSLVVAGGCTATSHTSRCTNGTCAISLSGEQSLDVEVGRLERTLRVSPIEPTAVTVSARGDSARVPAGGSAEVGDLAVRVDSIAGRDVELTVGPA
Ga0207669_112186461	3300025937	Miscanthus Rhizosphere	MRRLVLLLLLALSLVVAGGCTATSHTSRCTNGTCAISLSGEQSLDVEVGRLERTLRVSPIEPTAVTVSARGDSARVPAGGSAEVGDLAVRVDSIAGRDVELTVGPA
Ga0207661_101246673	3300025944	Corn Rhizosphere	MRRFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEV
Ga0207661_114295892	3300025944	Corn Rhizosphere	IPLMRRFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA
Ga0207679_101863282	3300025945	Corn Rhizosphere	MRRFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA
Ga0207667_105443941	3300025949	Corn Rhizosphere	CAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPV
Ga0207639_110222442	3300026041	Corn Rhizosphere	LLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0207702_110643071	3300026078	Corn Rhizosphere	TSRCVNDTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA
Ga0207683_101520552	3300026121	Miscanthus Rhizosphere	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV
Ga0207698_100214855	3300026142	Corn Rhizosphere	TACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPTGGVGEVGGLAVQVVSIAGRDVQLTVRPV
Ga0209074_102959551	3300027787	Agricultural Soil	APLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPAAVTLSARGDTARVATGSVGEVGGLEVQVVSIGGRDVQLTVRPA
Ga0247828_103443302	3300028587	Soil	VLAPLCAAPRPVTIPPMRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVTTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0247818_102931732	3300028589	Soil	VLAPLCVPPAFATIPRMRQLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0307321_10040322	3300028704	Soil	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0307276_102239972	3300028705	Soil	GCQATSHTSRCTNGTCAISLTGEQSVDVEFGRLERTLRVAPIEQTAVTLSARGDSARVPAGQTAEVGGLAVRVVSIAGRDVALTVSPA
Ga0307291_10732892	3300028707	Soil	ATIPRMRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVTTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0307295_100567452	3300028708	Soil	MRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVTTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0307298_102533131	3300028717	Soil	TGIDVLAPLCAAPRPVTIPRMRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVTTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0307288_100075114	3300028778	Soil	RPATIPRMRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0307288_105069972	3300028778	Soil	RIDMLASLRVHWSVGEAYPMRRLVLLLLLALSLVVAGGCTATSHTSRCTNGTCAISLSGEQSLDVEVGRLERTLRVSPIEPTAVTVSARGDSARVPAGGSAEVGDLAVRVDSIAGRDVELTVGPA
Ga0307306_101453622	3300028782	Soil	ISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVTTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0307283_100333402	3300028790	Soil	TGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVTTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0307294_100785502	3300028810	Soil	VLAPLCAAPRPVTIPRMRRLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0307294_101145962	3300028810	Soil	MRRLAPLLLLPLVLAAGCTSHTSRCTDGTCAISLTGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPAGETAEVGGLAVRVKSIAGRDVALTVRPA
Ga0307310_100851552	3300028824	Soil	MRRLAPLLLLPLVLAAGCTSHTSRCTDGTCAISLIGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPAGETAEVGGLAVRVKSIAGRDVALTVRPA
Ga0247827_101067391	3300028889	Soil	MRQLAPLLLLPLVLATGCTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDSARVPTGSVGEVGGLAVQVVSIAGRDVQLTVRPA
Ga0247826_103871952	3300030336	Soil	ACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA
Ga0268253_102049991	3300030514	Agave	ISLSGEQSVDVEFGRLERTLRVAPIEPSAVTLSARGDSARVPPGETAEVGGLAVQVVSIAGRDVQLSVRPA
Ga0310886_106528332	3300031562	Soil	MRRFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVS
Ga0307468_1006399351	3300031740	Hardwood Forest Soil	MRRLAPLLLLPLVLATGCTSHTSRCTNGTCAISLTGEQSVDVEFGRLERTLRVAPIEQTAVTLSARGDSARVPAGETAEVGGLAVRVVSIAGRDVALTVSPA
Ga0310906_108761911	3300032013	Soil	RLFARIPLMRRFAPLLLLPLVLATACTSHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA
Ga0247829_106279902	3300033550	Soil	LATACTLHTSRCVNGTCAISLSGEQSVDVEFGRLERTLRVAPIEPTAVTLSARGDTARVANGSVGEVGGLEVQVVSIAGRDVQLTVRPA