NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F091557

Metagenome / Metatranscriptome Family F091557

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091557
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 79 residues
Representative Sequence MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG
Number of Associated Samples 100
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 56.07 %
% of genes near scaffold ends (potentially truncated) 24.30 %
% of genes from short scaffolds (< 2000 bps) 76.64 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (85.047 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.757 % of family members)
Environment Ontology (ENVO) Unclassified
(34.579 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.271 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96
1JGI10215J12807_12388542
2C688J18823_102787372
3C688J35102_1203770302
4Ga0062589_1007881911
5Ga0062592_1008789721
6Ga0058863_115640502
7Ga0065705_100031285
8Ga0065705_110084011
9Ga0070683_1018822951
10Ga0070692_100792872
11Ga0070692_102641862
12Ga0070668_1001193222
13Ga0070674_1016219842
14Ga0070659_1011213081
15Ga0070705_1009101682
16Ga0070700_1000676221
17Ga0070678_1002816871
18Ga0070662_1002483382
19Ga0070662_1004359551
20Ga0068867_1001487273
21Ga0070684_1006844892
22Ga0070695_1000424092
23Ga0070702_1003217732
24Ga0075428_1005684652
25Ga0068865_1004502752
26Ga0105245_127926342
27Ga0075418_100295696
28Ga0114129_134700911
29Ga0105242_100889393
30Ga0105238_113019352
31Ga0105249_119226572
32Ga0126307_1000052921
33Ga0126313_103767452
34Ga0126315_107807081
35Ga0126308_100363043
36Ga0126312_102679241
37Ga0126311_100349644
38Ga0127447_10573281
39Ga0126319_15473541
40Ga0134128_106980722
41Ga0105239_115293511
42Ga0134124_100387404
43Ga0134127_111183572
44Ga0134122_102187141
45Ga0134123_105555152
46Ga0105246_108565621
47Ga0127502_101614012
48Ga0150985_1085786792
49Ga0150985_1110320882
50Ga0134043_10037692
51Ga0134049_13906212
52Ga0134045_13315672
53Ga0134060_11364122
54Ga0157281_11098002
55Ga0157305_100705002
56Ga0157285_100932391
57Ga0157291_100621571
58Ga0157301_100029472
59Ga0157378_105371851
60Ga0157378_129838001
61Ga0157372_123701791
62Ga0157375_137043121
63Ga0157380_104393721
64Ga0157380_111497381
65Ga0173478_107804571
66Ga0132256_1000709811
67Ga0132257_1000301844
68Ga0132255_1001130521
69Ga0190266_100038384
70Ga0184624_101434331
71Ga0190269_108609152
72Ga0190268_108386931
73Ga0190270_1000137810
74Ga0173481_100026385
75Ga0190267_100004508
76Ga0207697_103849222
77Ga0207688_100330982
78Ga0207660_106330262
79Ga0207657_109177331
80Ga0207690_105301601
81Ga0207709_111335312
82Ga0207704_106472672
83Ga0207679_104347401
84Ga0207712_101334202
85Ga0207668_102998402
86Ga0207708_101193542
87Ga0207648_101759152
88Ga0207562_10073742
89Ga0207428_100050038
90Ga0307301_100141641
91Ga0307316_103850371
92Ga0307288_103783021
93Ga0307292_100743471
94Ga0307277_100592991
95Ga0308204_100292101
96Ga0307408_1002349912
97Ga0310886_106462521
98Ga0307405_108434521
99Ga0307405_116351681
100Ga0307413_104713172
101Ga0307412_112292362
102Ga0308175_1008728691
103Ga0310885_102613122
104Ga0307409_1000078223
105Ga0314781_033410_55_306
106Ga0314783_095743_389_613
107Ga0370541_004086_2_226
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 36.25%    β-sheet: 0.00%    Coil/Unstructured: 63.75%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAGCytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
85.0%15.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Groundwater Sediment
Soil
Terrestrial Soil
Serpentine Soil
Grasslands Soil
Switchgrass Rhizosphere
Soil
Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Host-Associated
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
17.8%4.7%5.6%4.7%2.8%4.7%6.5%2.8%3.7%3.7%5.6%3.7%2.8%5.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10215J12807_123885423300000881SoilMSTPDIAQRLDGAIDVSVVGETSVVRDLRELDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG*
C688J18823_1027873723300001686SoilMDMSTPSTAQSLDGALDASVVRETSVAVRHGRERDDLGERDIAASLESTNDLPMQFVRLGLPAAIFLWFVFGLLAYGAYRFFAG*
C688J35102_12037703023300002568SoilMDMSTPSTAQSLDGALDVSVVRETSVAVRHGRERDDLGERDIAASLESTNDLPMQFVRLGLPAAIFLWFVFG
Ga0062589_10078819113300004156SoilLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERDHLREPDTAVSHESTNDIPMQFVRLGLPVSIFLWFVAVLVAYGAYRFLAG*
Ga0062592_10087897213300004480SoilVSTPNTAPSLEGAFDVSVVGETNVVRDRRERDHLREPDTAVSHESTNDIPMQFVRLGLPVSIFLWFVAVLVAYGAYRFLAG*
Ga0058863_1156405023300004799Host-AssociatedAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG*
Ga0065705_1000312853300005294Switchgrass RhizosphereMDMSTPSTAQSLDGAVDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG*
Ga0065705_1100840113300005294Switchgrass RhizosphereLDMSTPDIAQRLDGAIDVSVVGETSVVRDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFA
Ga0070683_10188229513300005329Corn RhizosphereFEQFLAKSRATIVDMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG*
Ga0070692_1007928723300005345Corn, Switchgrass And Miscanthus RhizosphereMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG*
Ga0070692_1026418623300005345Corn, Switchgrass And Miscanthus RhizosphereLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREQDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG*
Ga0070668_10011932223300005347Switchgrass RhizosphereLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASRGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG*
Ga0070674_10162198423300005356Miscanthus RhizosphereMAQRLDGAIDVSVVGETSVVRDRRERENLREPDTAAHESTNDVPMQFVRLGLPVTIFLWFVFVLLAYGAYRFFAG*
Ga0070659_10112130813300005366Corn RhizosphereMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAGYGAYRFFTG*
Ga0070705_10091016823300005440Corn, Switchgrass And Miscanthus RhizosphereLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG*
Ga0070700_10006762213300005441Corn, Switchgrass And Miscanthus RhizosphereMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVF
Ga0070678_10028168713300005456Miscanthus RhizosphereGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG*
Ga0070662_10024833823300005457Corn RhizosphereILDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG*
Ga0070662_10043595513300005457Corn RhizosphereVDMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG*
Ga0068867_10014872733300005459Miscanthus RhizosphereMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAGHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG*
Ga0070684_10068448923300005535Corn RhizosphereMSTPDIAQRLDGAIDVSVVGETSVVRDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG*
Ga0070695_10004240923300005545Corn, Switchgrass And Miscanthus RhizosphereLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG*
Ga0070702_10032177323300005615Corn, Switchgrass And Miscanthus RhizosphereMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRF
Ga0075428_10056846523300006844Populus RhizosphereMDMSTPSTAQSLDGALDASVVRKTSVVRDARERGDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG*
Ga0068865_10045027523300006881Miscanthus RhizosphereMSTPNMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG*
Ga0105245_1279263423300009098Miscanthus RhizosphereVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG*
Ga0075418_1002956963300009100Populus RhizosphereMDMSTPSTAQSLDGALDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG*
Ga0114129_1347009113300009147Populus RhizosphereMDMSTPSTAQSLDGALDASVIRGTSVVRDGRERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG*
Ga0105242_1008893933300009176Miscanthus RhizosphereMSTPDMAQRLDGAIDVSVVGETSLVRDRRERENLREPDTAAHESTNDVPMQFVRLGLPVTIFLWFVFVLLAYGAYRFFAG*
Ga0105238_1130193523300009551Corn RhizosphereLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLV
Ga0105249_1192265723300009553Switchgrass RhizosphereMSTPDMAQRLDGAIDVSVVGETSVVRDLREPDTAAHESVNDIPMQFVRLGLPVSIFLWFVVVLVAYGAYRFLAG*
Ga0126307_10000529213300009789Serpentine SoilMDMSTPSTAHSLDGALDASVVRETSVIRDGREREDLGEPDIAASLAFTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG*
Ga0126313_1037674523300009840Serpentine SoilMDMSTPSTAHSLDGALDASVVRETSVIRDGRERDDLGEPDIAASLAFTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG*
Ga0126315_1078070813300010038Serpentine SoilMDMSTPSTAHSLDGALDASVVRETSVIRDGRERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG*
Ga0126308_1003630433300010040Serpentine SoilMDMSTPSTAHSLDGALDASVVRETSVIRDGRERDDFGEPDIAASLAFTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG*
Ga0126312_1026792413300010041Serpentine SoilIMDMSTPSTAHSLDGALDASVVRETSVIRDGRERDDLGEPDIAASLAFTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG*
Ga0126311_1003496443300010045Serpentine SoilMDMSTPSTAHSLDGALDASVVRGTGVVRDGRERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRIFAG*
Ga0127447_105732813300010136Grasslands SoilQNLDDAVDIPVVGETRVVRDGREQDDFGEPSIAGSPESTNEFPMQFVRLGVPAAIFLWLVLGLVAYGAYRFFAG*
Ga0126319_154735413300010147SoilMDMSTPSTAQSLDGAVDASVVRKTNVVRDGRERDDLGEPDIAASLESTNEVPMQFVRLGLPAAICLWLVIGLVAYGAYRFFAG*
Ga0134128_1069807223300010373Terrestrial SoilLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHESTNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG*
Ga0105239_1152935113300010375Corn RhizosphereMAQRLDGAIDVSVVGETSVVRDQRERDDVRESDTATHESTNDVPMQFVRLGLPAAIFLWFVFVLLAYGAYRFFTG*
Ga0134124_1003874043300010397Terrestrial SoilMSTHDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG*
Ga0134127_1111835723300010399Terrestrial SoilMSTSDMAQRLDGAIDVSVVGETSVVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLLAYGAYRFFAG*
Ga0134122_1021871413300010400Terrestrial SoilMSTHDMAQRLDGAIDVSVVGETSVVRDQRARDDLRESDTATHESTNDVPMQFVRLGLPAAIFLWFVFVLLAYGAYRFFAG*
Ga0134123_1055551523300010403Terrestrial SoilMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG*
Ga0105246_1085656213300011119Miscanthus RhizosphereRANILDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG*
Ga0127502_1016140123300011333SoilMDMSTPSTAQSLDGALDASVVRGTSVVRDGRERDDVGEPDIAASLESTNEVPMQFVRLGLPVAIFLWFVIGLVAYGAYRFFAG*
Ga0150985_10857867923300012212Avena Fatua RhizosphereMDMSTPSTAQSLDGALDVSVVRETSVAVRHGRERDDLGERDIAASLESTNDLPMQFVRLGLPAAIFLWFVFGLLAYGAYRFFAG*
Ga0150985_11103208823300012212Avena Fatua RhizosphereMDMSTPSTAQSLDGALDASVRATSVAVRDGRERDALGERDVAASLESTNDIPMQFVRLGLPAAIFLWFVFGLLAYGAYRFFAG*
Ga0134043_100376923300012392Grasslands SoilFEQFLAKSTANIMDMSTPSMAQNLDDAVDIPVVGETRVVRDGREQDDFGEPSIAGSPESTNEFPMQFVRLGVPAAIFLWLVLGLVAYGAYRFFAG*
Ga0134049_139062123300012403Grasslands SoilMDMSTPSMAQNLDDAVDIPVVGETRVVRDGREQDDFGEPSIAGSPESTNEFPMQFVRLGVPAAIFLWLVLGLVAYGAYRFFAG*
Ga0134045_133156723300012409Grasslands SoilMDMSTPSMAQNLDDAVDIPVVGETRVVRDGREQDDFGEPSIAGSPESTNEFPMQFVRLGVPAAIFLWLVLGLVAYGAYRFFAC*
Ga0134060_113641223300012410Grasslands SoilMAQNLDDAVDIPVVGETRVVRDGREQDDFGEPSIGGSPESTNEFPMQFVRLGVPAAIFLWLVLGLVAYGAYRFFAG*
Ga0157281_110980023300012883SoilMSTPDIAQRLDGAIDVSVVGETSVVRDLRELDTAAHESMNDIPMQFVRLGLPATIFLWFIFVLVAYGAYRFFAG*
Ga0157305_1007050023300012891SoilMSTPDIAQRLDGAIDVSVVGETSVVRDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG*
Ga0157285_1009323913300012897SoilDMSTPDIAQRLDGAIDVSVVGETSVVRDLRELDTAAHESMDDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG*
Ga0157291_1006215713300012902SoilMSTPDIAQRLDGAIDVSVVGETSVVRDLRELDTAAHESMDDIPMQFVRLGLPVTIFLWFVFVLLAYGAYRFFAG*
Ga0157301_1000294723300012911SoilMSTPDIAQRLDGAIDVSVVGETSVVRDLREPDTAADESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG*
Ga0157378_1053718513300013297Miscanthus RhizosphereLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVRLGLPATIFLWFVFFLVAYGAYRFLAG*
Ga0157378_1298380013300013297Miscanthus RhizosphereMSTHDMAQRLDGAIDVSVVVETGVVRGRREREALRESEAAHESTNDVPMQFVRLGLPVTIFLWFVFVLLAYGAYRFFAG*
Ga0157372_1237017913300013307Corn RhizosphereMSTPDMAQRLDGAIDVSVVGETSVVRDRRERENLRESDTATHESTNDVPMQFVRLGLPAAIFLWFVFVLLAYGAYRFFAG*
Ga0157375_1370431213300013308Miscanthus RhizospherePDIAQRLDGAIDVSVVGETSVVRDLREPDTAAHASMNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG*
Ga0157380_1043937213300014326Switchgrass RhizosphereMSTPNMAQRLDGAIDVSVVGETSVVRDRRERDDLRERETAAHESMNDIPMQFVRLGLPATIFLWFVFVLLAYGAYRFFAG*
Ga0157380_1114973813300014326Switchgrass RhizosphereLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNRLREPDTAASHESTNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG*
Ga0173478_1078045713300015201SoilMSTPDIAQRFDGAIDVSVVGETSVVRDLRELDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRF
Ga0132256_10007098113300015372Arabidopsis RhizosphereMSTPDMAQRLDGAIDVSVVGETGVVRDRREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG*
Ga0132257_10003018443300015373Arabidopsis RhizosphereMNTPDMAQRLDGAIDVSVVGETGVVRDRREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG*
Ga0132255_10011305213300015374Arabidopsis RhizosphereMNTPDMAQRLDGAIDVSVVGETGVVRDRREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFAG*
Ga0190266_1000383843300017965SoilMDMSTPSTAQSLDGAVDASVVRKPNVVRDGRERDDLGEPDIAASPGSTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG
Ga0184624_1014343313300018073Groundwater SedimentLDVSTPNTAPSLEGALDVSVVGETNVVRDRRERDHLREPDTAASHESTNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG
Ga0190269_1086091523300018465SoilMDMSTPSTAQSLDGAVDASVVRKTSVVRDARERGDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG
Ga0190268_1083869313300018466SoilMDMSTPSTAQSLDGAVDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPATIFLWFVFVLVAYGAYRFF
Ga0190270_10001378103300018469SoilMDMSTPSTAQSLDGAVHASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG
Ga0173481_1000263853300019356SoilMSTPDIAQRLDGAIDVSVVGETSVVRDLRELDTAAHESMNDIPMQFVRLGLPVSIFLWFVAVLVAYGAYRFFAG
Ga0190267_1000045083300019767SoilMDMSTPSTAQSLDGAVDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVVGLVAYGAYRFFAG
Ga0207697_1038492223300025315Corn, Switchgrass And Miscanthus RhizosphereLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG
Ga0207688_1003309823300025901Corn, Switchgrass And Miscanthus RhizosphereLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG
Ga0207660_1063302623300025917Corn RhizosphereMSTSDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG
Ga0207657_1091773313300025919Corn RhizosphereVDMSTSDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFLAG
Ga0207690_1053016013300025932Corn RhizosphereDGAIDVSVVGETGAVRDRRERDDLREPDTAGHESMNDIPMQFVRLGLPVTIFLWFVFVLLAYGAYRFFAG
Ga0207709_1113353123300025935Miscanthus RhizosphereMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFT
Ga0207704_1064726723300025938Miscanthus RhizosphereMSTPNMAQRLDGAIDVSVVGETSVVRDRRERDDLRERETAAHESMNDIPMQFVRLGLPAAIFLWFVFVLLAYGAYRFFAG
Ga0207679_1043474013300025945Corn RhizosphereMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG
Ga0207712_1013342023300025961Switchgrass RhizosphereVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG
Ga0207668_1029984023300025972Switchgrass RhizosphereLDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASRGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG
Ga0207708_1011935423300026075Corn, Switchgrass And Miscanthus RhizosphereMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFFLVAYGAYRFFAG
Ga0207648_1017591523300026089Miscanthus RhizosphereMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAGHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG
Ga0207562_100737423300027446SoilLDMSTPDIAQRLDGAIDVSVVGETSVVRDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG
Ga0207428_1000500383300027907Populus RhizosphereMDMSTPSTAQSLDGALDASVVRKTSVVRDARERGDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG
Ga0307301_1001416413300028719SoilMSTPNTAQSLEGAFDVSVVGETSVVRDRRERDHLREPDTAASHESTSDIPMQFVRLGLPAAIFLWFVFGLAAYGAYRFFAG
Ga0307316_1038503713300028755SoilLDMSTPNTAQSLEGAFDVSVVGETSVVRDRRERDHLREPDTAASHESTSDIPMQFVRLGLPAAIFLWFVFGLAAYGAYRFFAG
Ga0307288_1037830213300028778SoilMDMSTPSTAQSLDGALDAPVRETSVVRNGRERDDLGERDIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFLAG
Ga0307292_1007434713300028811SoilMSTPNTAQSLEGAFDVSVVGETSVVRDRRERDHLREPDTAASHESTSDIPMQFVRLGLPAAIFLWFVFGLAA
Ga0307277_1005929913300028881SoilMDMSTPSTAQSLDGALDAPVRETSVVRNGRESDDLGERDIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFLAG
Ga0308204_1002921013300031092SoilLEGAFDVSVVGETSVVRDRRERDHLREPDTAASHESTSDIPMQFVRLGLPAAIFLWFVFGLAAYGAYRFFAG
Ga0307408_10023499123300031548RhizosphereMDMSTPSTAQSLDGALDASVVRETSVVRDGRERDALGEPDIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG
Ga0310886_1064625213300031562SoilMDMSTPSTAQSLDGALDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG
Ga0307405_1084345213300031731RhizosphereMDMSTPSTAHSLDGALDASVVRETSVIRDGRERDDLGEPDIAASLASTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG
Ga0307405_1163516813300031731RhizosphereMDMSTPSTAQSLDGALDASVVRETSVVRDGRERDALGEPDIAASLESTNEVPMQFVRLGLPVAIFLWFVIGL
Ga0307413_1047131723300031824RhizosphereMDMSTPSTAHSLDGALDGSVVMGTSVIRDGRERDDLGEPDIAASLASTNEIPMQFVRLGLPTAIFLWFVIGLVAYGAYRFFAG
Ga0307412_1122923623300031911RhizosphereDMSTPSTAQSLDGALDASVVRETSVIRDGRERDDLGEPDIAASLASTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG
Ga0308175_10087286913300031938SoilALDASVRETSVVRDGRERDDLGERDIAASPESTNDVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFLTG
Ga0310885_1026131223300031943SoilMDMSTPSTAQSLDGAVDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFLAG
Ga0307409_10000782233300031995RhizosphereMDMSTPSTAHSLDGALDGSVVMGTSVIRDGRERDDLGEPDIAASLASTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG
Ga0314781_033410_55_3063300034660SoilMDMSTPSTAQSLDGALDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG
Ga0314783_095743_389_6133300034662SoilMSTPDMAQRLDGAIDVSVVGETGLLRDRPEPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG
Ga0370541_004086_2_2263300034680SoilAQSLDGALDAPVRETSVVRNGRERDDLGEREIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFLAG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.