Basic Information | |
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Family ID | F091537 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 107 |
Average Sequence Length | 112 residues |
Representative Sequence | MRTRILVVAAAGLFCGFTATPEYERQGRGTVSGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFVKQRFRVSDT |
Number of Associated Samples | 91 |
Number of Associated Scaffolds | 107 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 84.11 % |
% of genes near scaffold ends (potentially truncated) | 28.97 % |
% of genes from short scaffolds (< 2000 bps) | 72.90 % |
Associated GOLD sequencing projects | 86 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.67 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (68.224 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.430 % of family members) |
Environment Ontology (ENVO) | Unclassified (41.121 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Subsurface (non-saline) (43.925 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 47.86% β-sheet: 0.00% Coil/Unstructured: 52.14% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.67 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 107 Family Scaffolds |
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PF00072 | Response_reg | 12.15 |
PF02653 | BPD_transp_2 | 7.48 |
PF01757 | Acyl_transf_3 | 6.54 |
PF02900 | LigB | 5.61 |
PF07992 | Pyr_redox_2 | 2.80 |
PF13604 | AAA_30 | 2.80 |
PF00561 | Abhydrolase_1 | 1.87 |
PF00296 | Bac_luciferase | 1.87 |
PF13361 | UvrD_C | 1.87 |
PF00355 | Rieske | 1.87 |
PF13538 | UvrD_C_2 | 0.93 |
PF04028 | DUF374 | 0.93 |
PF13531 | SBP_bac_11 | 0.93 |
PF00866 | Ring_hydroxyl_B | 0.93 |
PF13424 | TPR_12 | 0.93 |
PF13751 | DDE_Tnp_1_6 | 0.93 |
PF14535 | AMP-binding_C_2 | 0.93 |
PF04909 | Amidohydro_2 | 0.93 |
PF01408 | GFO_IDH_MocA | 0.93 |
PF00005 | ABC_tran | 0.93 |
PF02661 | Fic | 0.93 |
PF00848 | Ring_hydroxyl_A | 0.93 |
PF12705 | PDDEXK_1 | 0.93 |
PF13472 | Lipase_GDSL_2 | 0.93 |
PF12399 | BCA_ABC_TP_C | 0.93 |
PF00795 | CN_hydrolase | 0.93 |
COG ID | Name | Functional Category | % Frequency in 107 Family Scaffolds |
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COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 1.87 |
COG4638 | Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit | Inorganic ion transport and metabolism [P] | 1.87 |
COG2121 | Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamily | Function unknown [S] | 0.93 |
COG5517 | 3-phenylpropionate/cinnamic acid dioxygenase, small subunit | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.93 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 68.22 % |
Unclassified | root | N/A | 31.78 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300004463|Ga0063356_100944922 | All Organisms → cellular organisms → Bacteria | 1224 | Open in IMG/M |
3300004463|Ga0063356_103181427 | Not Available | 707 | Open in IMG/M |
3300005336|Ga0070680_100534012 | Not Available | 1005 | Open in IMG/M |
3300005458|Ga0070681_10722905 | Not Available | 912 | Open in IMG/M |
3300005545|Ga0070695_100794172 | All Organisms → cellular organisms → Bacteria | 758 | Open in IMG/M |
3300006845|Ga0075421_100255250 | All Organisms → cellular organisms → Bacteria | 2148 | Open in IMG/M |
3300007265|Ga0099794_10494754 | Not Available | 643 | Open in IMG/M |
3300009038|Ga0099829_10005715 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini | 7597 | Open in IMG/M |
3300009088|Ga0099830_10009481 | All Organisms → cellular organisms → Bacteria | 5873 | Open in IMG/M |
3300009089|Ga0099828_10003593 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini | 10841 | Open in IMG/M |
3300009090|Ga0099827_10439671 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1117 | Open in IMG/M |
3300009143|Ga0099792_10071075 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla | 1755 | Open in IMG/M |
3300009147|Ga0114129_10236786 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2456 | Open in IMG/M |
3300010400|Ga0134122_10228514 | All Organisms → cellular organisms → Bacteria | 1559 | Open in IMG/M |
3300011269|Ga0137392_10002395 | All Organisms → cellular organisms → Bacteria | 11272 | Open in IMG/M |
3300011395|Ga0137315_1050692 | Not Available | 594 | Open in IMG/M |
3300011419|Ga0137446_1031064 | Not Available | 1136 | Open in IMG/M |
3300011429|Ga0137455_1206164 | Not Available | 585 | Open in IMG/M |
3300012113|Ga0137328_1029714 | All Organisms → cellular organisms → Bacteria | 548 | Open in IMG/M |
3300012164|Ga0137352_1004520 | All Organisms → cellular organisms → Bacteria | 2308 | Open in IMG/M |
3300012203|Ga0137399_10214541 | All Organisms → cellular organisms → Bacteria | 1567 | Open in IMG/M |
3300012355|Ga0137369_10622014 | Not Available | 749 | Open in IMG/M |
3300012363|Ga0137390_10039232 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4559 | Open in IMG/M |
3300012922|Ga0137394_10882585 | Not Available | 747 | Open in IMG/M |
3300012929|Ga0137404_10331298 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1327 | Open in IMG/M |
3300014873|Ga0180066_1041761 | Not Available | 893 | Open in IMG/M |
3300014884|Ga0180104_1121301 | Not Available | 756 | Open in IMG/M |
3300014885|Ga0180063_1025500 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1632 | Open in IMG/M |
3300015052|Ga0137411_1125564 | Not Available | 621 | Open in IMG/M |
3300015170|Ga0120098_1073698 | Not Available | 511 | Open in IMG/M |
3300015259|Ga0180085_1025432 | All Organisms → cellular organisms → Bacteria | 1653 | Open in IMG/M |
3300015259|Ga0180085_1098770 | Not Available | 860 | Open in IMG/M |
3300017997|Ga0184610_1003308 | All Organisms → cellular organisms → Bacteria | 3710 | Open in IMG/M |
3300018000|Ga0184604_10073044 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1006 | Open in IMG/M |
3300018027|Ga0184605_10221543 | Not Available | 859 | Open in IMG/M |
3300018028|Ga0184608_10033398 | All Organisms → cellular organisms → Bacteria | 1950 | Open in IMG/M |
3300018051|Ga0184620_10319904 | Not Available | 525 | Open in IMG/M |
3300018052|Ga0184638_1095245 | All Organisms → cellular organisms → Bacteria | 1092 | Open in IMG/M |
3300018052|Ga0184638_1100555 | All Organisms → cellular organisms → Bacteria | 1060 | Open in IMG/M |
3300018053|Ga0184626_10185676 | Not Available | 883 | Open in IMG/M |
3300018054|Ga0184621_10105036 | Not Available | 1002 | Open in IMG/M |
3300018063|Ga0184637_10010705 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 5518 | Open in IMG/M |
3300018071|Ga0184618_10010309 | All Organisms → cellular organisms → Bacteria | 2801 | Open in IMG/M |
3300018075|Ga0184632_10378471 | Not Available | 599 | Open in IMG/M |
3300018076|Ga0184609_10370955 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 667 | Open in IMG/M |
3300018078|Ga0184612_10014020 | All Organisms → cellular organisms → Bacteria | 4087 | Open in IMG/M |
3300018078|Ga0184612_10207980 | Not Available | 1016 | Open in IMG/M |
3300018079|Ga0184627_10105874 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1486 | Open in IMG/M |
3300018084|Ga0184629_10040256 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2078 | Open in IMG/M |
3300018422|Ga0190265_10176507 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2122 | Open in IMG/M |
3300018422|Ga0190265_10299395 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1678 | Open in IMG/M |
3300018422|Ga0190265_11036770 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 | 942 | Open in IMG/M |
3300018422|Ga0190265_12568876 | Not Available | 607 | Open in IMG/M |
3300018422|Ga0190265_12836377 | Not Available | 579 | Open in IMG/M |
3300018429|Ga0190272_10064670 | All Organisms → cellular organisms → Bacteria | 2189 | Open in IMG/M |
3300018429|Ga0190272_10659936 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 932 | Open in IMG/M |
3300018429|Ga0190272_10768128 | All Organisms → cellular organisms → Bacteria | 881 | Open in IMG/M |
3300019259|Ga0184646_1174266 | All Organisms → cellular organisms → Bacteria | 922 | Open in IMG/M |
3300019458|Ga0187892_10006717 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 16900 | Open in IMG/M |
3300019487|Ga0187893_10161851 | All Organisms → cellular organisms → Bacteria | 1796 | Open in IMG/M |
3300019878|Ga0193715_1015302 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1658 | Open in IMG/M |
3300019881|Ga0193707_1024670 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1981 | Open in IMG/M |
3300019882|Ga0193713_1027137 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1685 | Open in IMG/M |
3300019883|Ga0193725_1019427 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1863 | Open in IMG/M |
3300019883|Ga0193725_1027764 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1523 | Open in IMG/M |
3300019886|Ga0193727_1085711 | Not Available | 949 | Open in IMG/M |
3300019886|Ga0193727_1116839 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 767 | Open in IMG/M |
3300020003|Ga0193739_1008282 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2752 | Open in IMG/M |
3300020060|Ga0193717_1087909 | All Organisms → cellular organisms → Bacteria | 1003 | Open in IMG/M |
3300020170|Ga0179594_10086427 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1112 | Open in IMG/M |
3300021073|Ga0210378_10010254 | All Organisms → cellular organisms → Bacteria | 3977 | Open in IMG/M |
3300021078|Ga0210381_10336846 | Not Available | 549 | Open in IMG/M |
3300021080|Ga0210382_10024298 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2222 | Open in IMG/M |
3300021090|Ga0210377_10013733 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 6147 | Open in IMG/M |
3300021344|Ga0193719_10003442 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 6382 | Open in IMG/M |
3300022534|Ga0224452_1019703 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1868 | Open in IMG/M |
3300022694|Ga0222623_10189458 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 799 | Open in IMG/M |
3300025912|Ga0207707_10650139 | Not Available | 889 | Open in IMG/M |
3300025917|Ga0207660_10567220 | Not Available | 924 | Open in IMG/M |
3300026360|Ga0257173_1000068 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini | 4057 | Open in IMG/M |
3300026480|Ga0257177_1000121 | All Organisms → cellular organisms → Bacteria | 4224 | Open in IMG/M |
3300026535|Ga0256867_10009719 | All Organisms → cellular organisms → Bacteria | 4213 | Open in IMG/M |
3300027815|Ga0209726_10020835 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5593 | Open in IMG/M |
3300027846|Ga0209180_10007251 | All Organisms → cellular organisms → Bacteria | 5642 | Open in IMG/M |
3300027882|Ga0209590_10673099 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 663 | Open in IMG/M |
3300027909|Ga0209382_10082708 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila | 3781 | Open in IMG/M |
3300028536|Ga0137415_10048782 | All Organisms → cellular organisms → Bacteria | 4115 | Open in IMG/M |
3300028673|Ga0257175_1048727 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RBG_16_73_20 | 772 | Open in IMG/M |
3300028711|Ga0307293_10184177 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 665 | Open in IMG/M |
3300028787|Ga0307323_10226098 | Not Available | 675 | Open in IMG/M |
3300028828|Ga0307312_10084376 | All Organisms → cellular organisms → Bacteria | 1947 | Open in IMG/M |
3300028884|Ga0307308_10556414 | Not Available | 550 | Open in IMG/M |
3300030006|Ga0299907_10352417 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1191 | Open in IMG/M |
(restricted) 3300031150|Ga0255311_1121383 | Not Available | 573 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10078046 | All Organisms → cellular organisms → Bacteria | 878 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10084866 | Not Available | 843 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10115060 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 728 | Open in IMG/M |
3300031229|Ga0299913_10354428 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1455 | Open in IMG/M |
(restricted) 3300031237|Ga0255334_1015556 | Not Available | 954 | Open in IMG/M |
(restricted) 3300031248|Ga0255312_1006684 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2748 | Open in IMG/M |
(restricted) 3300031248|Ga0255312_1025561 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1410 | Open in IMG/M |
3300031740|Ga0307468_101446131 | Not Available | 634 | Open in IMG/M |
3300032180|Ga0307471_102055168 | All Organisms → cellular organisms → Bacteria | 717 | Open in IMG/M |
3300032180|Ga0307471_104069965 | Not Available | 516 | Open in IMG/M |
3300033513|Ga0316628_101509754 | Not Available | 895 | Open in IMG/M |
3300034155|Ga0370498_029459 | All Organisms → cellular organisms → Bacteria | 1183 | Open in IMG/M |
3300034164|Ga0364940_0050668 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1118 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 22.43% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 15.89% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 15.89% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 9.35% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 6.54% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 4.67% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 3.74% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.80% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.80% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.80% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.87% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.87% |
Groundwater | Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater | 0.93% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.93% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 0.93% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.93% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.93% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.93% |
Fossill | Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill | 0.93% |
Microbial Mat On Rocks | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks | 0.93% |
Bio-Ooze | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze | 0.93% |
Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.93% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Environmental | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Environmental | Open in IMG/M |
3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
3300011395 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT200_2 | Environmental | Open in IMG/M |
3300011419 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2 | Environmental | Open in IMG/M |
3300011429 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2 | Environmental | Open in IMG/M |
3300012113 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT100_2 | Environmental | Open in IMG/M |
3300012164 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2 | Environmental | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012355 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300014873 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D | Environmental | Open in IMG/M |
3300014884 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da | Environmental | Open in IMG/M |
3300014885 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D | Environmental | Open in IMG/M |
3300015052 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300015170 | Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48 | Environmental | Open in IMG/M |
3300015259 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D | Environmental | Open in IMG/M |
3300017997 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex | Environmental | Open in IMG/M |
3300018000 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex | Environmental | Open in IMG/M |
3300018027 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex | Environmental | Open in IMG/M |
3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
3300018051 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1 | Environmental | Open in IMG/M |
3300018052 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2 | Environmental | Open in IMG/M |
3300018053 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1 | Environmental | Open in IMG/M |
3300018054 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1 | Environmental | Open in IMG/M |
3300018063 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2 | Environmental | Open in IMG/M |
3300018071 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1 | Environmental | Open in IMG/M |
3300018075 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1 | Environmental | Open in IMG/M |
3300018076 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex | Environmental | Open in IMG/M |
3300018078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex | Environmental | Open in IMG/M |
3300018079 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1 | Environmental | Open in IMG/M |
3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
3300019259 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019458 | Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG | Environmental | Open in IMG/M |
3300019487 | White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG | Environmental | Open in IMG/M |
3300019878 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2 | Environmental | Open in IMG/M |
3300019881 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2 | Environmental | Open in IMG/M |
3300019882 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2 | Environmental | Open in IMG/M |
3300019883 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2 | Environmental | Open in IMG/M |
3300019886 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2 | Environmental | Open in IMG/M |
3300020003 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2 | Environmental | Open in IMG/M |
3300020060 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2 | Environmental | Open in IMG/M |
3300020170 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300021073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo | Environmental | Open in IMG/M |
3300021078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo | Environmental | Open in IMG/M |
3300021080 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo | Environmental | Open in IMG/M |
3300021090 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo | Environmental | Open in IMG/M |
3300021344 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2 | Environmental | Open in IMG/M |
3300022534 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1 | Environmental | Open in IMG/M |
3300022694 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex | Environmental | Open in IMG/M |
3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300026360 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B | Environmental | Open in IMG/M |
3300026480 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B | Environmental | Open in IMG/M |
3300026535 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq) | Environmental | Open in IMG/M |
3300027815 | Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes) | Environmental | Open in IMG/M |
3300027846 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027882 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300028673 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B | Environmental | Open in IMG/M |
3300028711 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150 | Environmental | Open in IMG/M |
3300028787 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381 | Environmental | Open in IMG/M |
3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
3300028884 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195 | Environmental | Open in IMG/M |
3300030006 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 | Environmental | Open in IMG/M |
3300031150 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4 | Environmental | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031229 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 | Environmental | Open in IMG/M |
3300031237 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_35cm_T3_129 | Environmental | Open in IMG/M |
3300031248 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5 | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
3300034155 | Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17 | Environmental | Open in IMG/M |
3300034164 | Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0063356_1009449222 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MRASLLVVAAAGLFCGITATPGYERQGRDNVGGAIAVATQECWSKVKGKAQVEWYGHLRKIDQSIRGDAVVNWTATSVARCVAEATGSHAHDPSISQLVDAFVKERFHVPDIRASR* |
Ga0063356_1031814271 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MRKRLLVVAAAGLFCAFTVSPDYERENLNGSVALAMKECWGQLKGKAQVEWHEHLRKIDEPARADAVVASTTRSVALCVADAAASREPDPSIWPIVDAFVKHRFGIPVHGYTR* |
Ga0070680_1005340121 | 3300005336 | Corn Rhizosphere | MRASLLVVAAAGLFCGITATPGYERQGRDNVGGAIAVATQECWSKVKGKAQVEWYGHLRKIDQSIRGDAVVNWTAKSVARCVAEATGSHAHDPSISQLVDAFVKERFHVPDIRASR* |
Ga0070681_107229051 | 3300005458 | Corn Rhizosphere | YERQGRDNVGGAIAVATQECWSKVKGKAQVEWYGHLRKIDQSIRGDAVVNWTATSVARCVAEATGSHAHDPSISQLVDAFVKERFHVPDIRASR* |
Ga0070695_1007941722 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MRASLLVVAAAGLFCGITATPGYERQGRDNVGGAIAVATQECWSKVKGKAQVEWYGHLRKIDQSIRGDAVVNWTATSVARCVAEATGSHAHDPSISQLVD |
Ga0075421_1002552502 | 3300006845 | Populus Rhizosphere | VRTRLLVVAAAGLFGGLTATLGYERPARENVSDPIALATQECWRTLKGKAQVEWYQHLRKIDEAARAAAVKTSTVTSVVQCVTEATGSQEPDPSIWPIVDAFVKQRFRASET* |
Ga0099794_104947542 | 3300007265 | Vadose Zone Soil | MRTRLLVAAATGLFCGLTATPEYEREKVSGPIALATQECWGKLKGKAQVEWYGHLRKIDESARANAVVTSTARAVARCVVIAAGSQESHSSIWLIVDAFVKHRFGVHAEVEHTTTADPA |
Ga0099829_100057154 | 3300009038 | Vadose Zone Soil | MRTRVLVVAAAGLLCGFTATPVYERKARENVSRSIAVATQECWGKLKGKAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFVKQRFRVP* |
Ga0099830_100094812 | 3300009088 | Vadose Zone Soil | MRTRVLVVAAAGLLCGFTATPVYERKARENVSRSIAVATQECWGKLKGKAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFMKQRFRVP* |
Ga0099828_100035937 | 3300009089 | Vadose Zone Soil | MRTRVLVVVAAAGLLCGFTATPVYERKARENVSRSIAVATQECWGKLKGKAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFVKQRFRVP* |
Ga0099827_104396712 | 3300009090 | Vadose Zone Soil | MKTRLLVAAAAGLFCGFTATPEYEREKVSGPIALATQECWSKLKGKAQVEWYGHLRKIDESARANAVVTSTARAVARCVVTATGSQEPESSIWLIVDAFVKHRFGVHAEAEHTTTADPAT |
Ga0099792_100710753 | 3300009143 | Vadose Zone Soil | VRRLVVRTRVLVVAAAGLFCGFTATPEYERQGRETGPIALATQECWGKLKGKAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFMKQRFRVP* |
Ga0114129_102367863 | 3300009147 | Populus Rhizosphere | MRRGLLVVAAAGLFCGFTATPAYERGNGPGPIALATQECWGKLKGKAQVEWYAHLRKIDQSPRANAVVTSTARSVARCVANATGSQEPDSSIWLIVDAFVNHRFGVPAELGHTTPADPAT |
Ga0134122_102285141 | 3300010400 | Terrestrial Soil | MRASLLVVAAAGLFCGITATPGYERQGRDNVGGAIAVATQECWSKVKGKAQVEWYGHLRKIDQSIRGDAVVNWTAKSVARCVAHATGSPAHD |
Ga0137392_100023951 | 3300011269 | Vadose Zone Soil | MRTRVLVVAAAGLLCGFTATPVYERKARENVSRSSAVATQECWGKLKGTAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFVKQRFRVP* |
Ga0137315_10506921 | 3300011395 | Soil | VRRLVVRTRVLVVAAAGLFCGFTATPEYERPGRGTVSGPIALATQECWGKLKGKAQVEWYGHLRKIDEPARADAVMTWTAKSVARCVATDTGSQEHDPSIGQIVDTFVKQRF* |
Ga0137446_10310641 | 3300011419 | Soil | MRARVLVVAAAGLVCGFTATPVYERNARENISRSIALATQECWGKLKGKAQVEWYGHLRTIDEPARADAVMTWTVSSVARCVATDTGSREHDPSAGRIVDAFVKQRFRVP* |
Ga0137455_12061641 | 3300011429 | Soil | MRTRFLVVAAAGLFCGFTATPEYERQGRGTVSGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATASQEPDASIWPI |
Ga0137328_10297141 | 3300012113 | Soil | GPTTSAEAVMRAPLLIIAAAGPFCGFTDTPEYERKARETVRGSITQATQECWTQLKGKMQVEWYRHLRAIDEPGRADAIMMSTMRSVEQCVGDAVGSQEYDPGLWKTVDTFVQQRFGTHRRAG* |
Ga0137352_10045202 | 3300012164 | Soil | MRTRLLVVAAAGLFCGFTATPEYERQARDNVSRSIALATQECWGKLKGKAQVEWYGHLRKIDEPARADAVMTWTAKSVARCVATDTGSQEHDPSIGQIVDTFVKQRF* |
Ga0137399_102145412 | 3300012203 | Vadose Zone Soil | MRARLLVAAATGLFCGLTATPEYEREKVSGPIALATQECWGKLKGKAQVEWYGHLRKIDESARANAVVTSTARAVARCVVIAAGSQESHSSIWLIVDAFVKHRFGVHAEVEHTTTADPAT |
Ga0137369_106220142 | 3300012355 | Vadose Zone Soil | MRIMRAPLLLAAAAGLFCGFTATPDYERRVRENTSAAIALATQECWGTVKGQAQVEWYRHLRKIDQAGRADAVVAWTAKSVARCVAGAPGFREHDPSSWRFVDAFVKQRFGIPAHSG* |
Ga0137390_100392321 | 3300012363 | Vadose Zone Soil | VRRLVVRTRVLVVAAAGLFCGFTATPEYERQGRETGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATASQEPDPSIWPIVDAFVKQR |
Ga0137394_108825851 | 3300012922 | Vadose Zone Soil | VEALMRSRLLVVAAAGLFCGFTATPAYERAKGPGPIALATQECWGQLKGKAQVEWYGHLRKIDQSPRANAVVTSTARSVARCVANATGSQEPDSSIWLIVDAFVKQRFGVHAEQGDTTPTDPAT* |
Ga0137404_103312982 | 3300012929 | Vadose Zone Soil | MRRGLLVVAAAGLFCGFTATPAYERGNGPGPIALATQECWGKLKGKAQVEWYAHLRKIDQSPRANAVVTSTARSVARCVADATGSQESDASIWPIVDAFVRHRFGVPAELGHTTPADPAT |
Ga0180066_10417611 | 3300014873 | Soil | MRTRLLVVAAAGLFCGFTATPEYERQTRDNVSRSIALATQECWGKLKGKAQVEWYGHLRKIDEPARADAVMTWTAKSVARCVATDTGSQEHDPSIGQIVDTFVKQRF* |
Ga0180104_11213012 | 3300014884 | Soil | MRARLLVVAAAGLFCGFTATPGYERPARGTVGGPIALATQECWGKLKGKGQVEWYGHLRKIDETVRADAVMTSTVRSVAQCVANATGSKEPDPSIWPIVDAFVKQRFRVSDT* |
Ga0180063_10255003 | 3300014885 | Soil | VRTRFLVVAAAGLFCGFTATPEYERRPQEHAGAPVARATQECWGQLKGKAQVDWYGHLRKIDETARAESVVTSTTASIVQCVADAAGSQEPDPTIWPVVDAFVKHRFAVPSE* |
Ga0137411_11255641 | 3300015052 | Vadose Zone Soil | MRTRLLVAAATGLFCGLTATPEYEREKVSGPIALATQECWGKLKGKAQVEWYGHLRKIDESARANAVVTSTARAVARCVVIAAGSQESHSSIWLIVDAFVKHRFGVHAEVEHTTTAD |
Ga0120098_10736981 | 3300015170 | Fossill | MKVQLLVVAAAGLFCGFTATPGYERPARENISGPIARATEECWGKLKGKAQVEWYEHLRKIDETLRADAVMTSTVRSVALCVAAATDSQEPDPSIWPIVDAFVKQ |
Ga0180085_10254322 | 3300015259 | Soil | VAEAVLRRGILVAAAAGLFCGFTATPEYERRPQEHAGAPVARATQECWGQLKGKAQVDWYGHLRKIDETARAESVVTSTTASIVQCVADAAGSQEPDPTIWPVVDAFVKHRFAVPSE* |
Ga0180085_10987701 | 3300015259 | Soil | RTRFLVVAAGGLFCGFTATPEYERPARENVSGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFVKQRFRVSDT* |
Ga0184610_10033082 | 3300017997 | Groundwater Sediment | MRTRFLVVAAAGLFCGFTATPEYERPGRGTVSGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFVKHRFRVSDT |
Ga0184604_100730441 | 3300018000 | Groundwater Sediment | MRRRLLVVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVAQCVATTAGSQEPDASIWPIVDAFVRHRFGVPAERGHSTPADPPT |
Ga0184605_102215432 | 3300018027 | Groundwater Sediment | MKGRLLVVAAAGLFCGFTATPEYEREKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDQSPRANAVVTSTARSVARCVADATGSQESDASIWPIVDAFVKHRFGVPAEQGHTTPADPAT |
Ga0184608_100333981 | 3300018028 | Groundwater Sediment | VVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVARCVATTASSQEPDASIWPIVDAFVRHRFGVPA |
Ga0184620_103199041 | 3300018051 | Groundwater Sediment | VVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVAQCVATTAGSQEPDASIWPIVDAFVRHRFGVPAEQGHTTPANPPT |
Ga0184638_10952452 | 3300018052 | Groundwater Sediment | MSTRVLVVAAAGLLCGFTATPVYERKARETVSRSIAVATEECWGKLKGKAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDA |
Ga0184638_11005552 | 3300018052 | Groundwater Sediment | MRTRLLVVAAAGLFCGFTATPEYERPGRGNVSGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVADATASQEPDASIWPIVDAFVKQRFRVSDT |
Ga0184626_101856762 | 3300018053 | Groundwater Sediment | MRTRILVVAAAGLFCGFTATPEYERPGRGTVRGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFVKQRFRVSDT |
Ga0184621_101050362 | 3300018054 | Groundwater Sediment | MRTRFLVVAAAGLFCGFTATPEYERPGRGTVNGPIPLATQECWGKLKGKAQVEWYEHLRKIDEPVRADAVMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFVKQRFRAPET |
Ga0184637_100107056 | 3300018063 | Groundwater Sediment | MRTRFLVVAAAGLFCGFTATPEYERPGRGTVSGSIELATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFVKQRFRVSDT |
Ga0184618_100103093 | 3300018071 | Groundwater Sediment | VVAATGLFCGFTVTPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVAQCVATTAGSQEPDASIWPIVDAFVKHRFGVPAEQGHTTPADPAT |
Ga0184632_103784712 | 3300018075 | Groundwater Sediment | MRTRVLVVAAAGLLCGFTATPVYERKARETVSRSIAVATEECWGKLKGKAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFVKQRFRVPQD |
Ga0184609_103709551 | 3300018076 | Groundwater Sediment | VLRIGRGSSVPGQPRVRRLVVRTRVLVVAAAGLFCGFTATPGYERQPRASVSGPIALATQECWGTLKGKAQVEWYEHLRKIDEPARAAAVMTSTVRSVVQCVANATGSQEPDPSIWPIVDAFVKQRFRVSDT |
Ga0184612_100140204 | 3300018078 | Groundwater Sediment | MRTRILVVAAAGLFCGFTATPEYERPGRGTVRGPIALATQECWRKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFVKQRFRVSDT |
Ga0184612_102079802 | 3300018078 | Groundwater Sediment | MRTRFLVVAAAGLFCGFTATPEYERPGRGTVSGSIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAIMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFVKHRFRVSDT |
Ga0184627_101058742 | 3300018079 | Groundwater Sediment | MRTRFLVVAAAGLFCGFTATPEYERPGRGTVSGSIELATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANAPGSQEPDPSIWPIVDAFVKQRFRVSDT |
Ga0184629_100402562 | 3300018084 | Groundwater Sediment | VRIRLLVVAAAGLLCGFTATPVYERQARENVSRSIALATQECWGKLKGKAQVEWYGHLRTIDEPARADAVITWTARSVARCVATDTGSQEHDPSIRRIVDAFVKQRFRVL |
Ga0190265_101765072 | 3300018422 | Soil | MRRRLLAVAAAGLFCGSTVTPEYAPRARENLSGPIALATQQCWGKLNGKAQVEWHGHLRKIDEPARADLIMTSTTRSVVQCVAHAAGSPEPDPTIWPIVDVFVKHRFGVPAQ |
Ga0190265_102993951 | 3300018422 | Soil | MKTRLLVVAAAGLFCGFTATPGYERPGENGDGSIARATQECWGKLRGKAQVEWYEHLKKIDETVRADAVMTSMVRSVVRCVADAIDSQEPDPSVWPIVDAFVKRRFRVSDT |
Ga0190265_110367702 | 3300018422 | Soil | MRRRLLVVAAAGLFCGSTMTPEYAPRVGDNFSGPIALATQACWGKLNGKAQVEWHGHLRKIDEPARADLIMTSTTRSVVQCVAHAAGSPEPDPTIWPIVDLFVKHRFGVPAQ |
Ga0190265_125688762 | 3300018422 | Soil | MRTSLVVIAAAGLFCGFTATPEHERKTRENAKGSITQATQECWTKLKGKAQVEWYGHLRKIDEPGRADAIMMSTMRAVERCVAEAVGGQEYDPATWKTVDTFVQQRFGIRPRSG |
Ga0190265_128363771 | 3300018422 | Soil | MKTRLLVVAAAGLFCGFTATPGYERPGESGDGSIARATQECWGKLKGKAQVEWYEHLKKIDETVRADAVMTSMVRSVVRCVADAIDSQEPDPSIWPIVDAFVKQRFRVSDT |
Ga0190272_100646702 | 3300018429 | Soil | VRTRFLVVAAAGLFCGFTATPGYERPARGTVGGPIARATQECWGNLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFVKQRFRVSDT |
Ga0190272_106599362 | 3300018429 | Soil | MRTRLLVVAAAGLFCGFTATPGYERQPRASVSGPIALATQECWGTLKGKAQVEWYEHLRKIDETARAAAVMTSTVRSVVQCVAAATDSQEPDPSIWPIVDAFVKQRFRAPET |
Ga0190272_107681281 | 3300018429 | Soil | MKAPLLVVAAAGLFCGFTATPDFDRKTRDNVSGSIVLATQECWSKLKGKAQVEWYRHLRAIDEPGRADAVMMSTMRSVEQCVAEAVGSQEYDPGLWKTVDTFVQQRFGTHRRAG |
Ga0184646_11742662 | 3300019259 | Groundwater Sediment | MRARFLVVAAAGLFCGFTATPEYERPGRGTVSGSIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFV |
Ga0187892_100067172 | 3300019458 | Bio-Ooze | VRTGLLVVAATGLFCGLTATPGYERPARENVSDPIALATQECWRTLKGKAQVEWYEHLRKIDETARAAAVMTSTVTSVVRCVTDATGSQEPDPSIWPIVDAFVKQRFRASET |
Ga0187893_101618513 | 3300019487 | Microbial Mat On Rocks | VRTGLLVVAATGLFCGLTATPGYERPARENVSDPIALATQECWRTLKGKAQVEWYEHLRKIDETARAAAVMTSTVTSVVQCVTDATGSQEPDPSIWPIVDAFVKQRFRASET |
Ga0193715_10153021 | 3300019878 | Soil | VVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVARCVATTAGSQEPDASIWPIVDAFVRHRFGVPAERGHSTPADPPT |
Ga0193707_10246702 | 3300019881 | Soil | MRRRLLVVAAAGLFCGFTTTPAYEREKGPGPIALATQECWSKLKGKAQVEWYGHLRKIDQSPRANAVVTSTARSVARCVATTAGSQESDASIWLIVDAFVKHRFGVPAEVELTTTADPAT |
Ga0193713_10271372 | 3300019882 | Soil | MRRRLLVVAAAGLFCGFTTTPSYEREKVSGPIALATQECWSKLKGKAQVEWYGHLRKIDQSPRANAVVTSTARSVARCVTTTAGSQESDASIWPIVDAFVKHRFGVPAEVELTTTADPAT |
Ga0193725_10194272 | 3300019883 | Soil | MRTRVLVVAAAGLLCGFTATPVYERKARENVSRSIAVATQECWGKLKGKAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFVKQRFRVP |
Ga0193725_10277643 | 3300019883 | Soil | VRTRVLVVAAAGLFCGFTATPEYERPGRETVSGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATASQEPDPSIWPIVDAFVKQRFRVSDT |
Ga0193727_10857112 | 3300019886 | Soil | PPSRANHVLVEALMRRGLLAVAAAGLFCGFTATPAYERGNGPGPIALATQECWGKLKGKAQVEWYAHLRKIDQSPRANAVVTSTARSVARCVADATGSQESDASIWPIVDAFVKHRFGVPAELGHTTPADPAT |
Ga0193727_11168391 | 3300019886 | Soil | MRTRLLVVAAAGLFCGFTATPAYEREKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVARCVATTAGSQEPDASIW |
Ga0193739_10082824 | 3300020003 | Soil | VRTRVLVVAAAGLFCGFTATPEYERPGREIVSGPIALATQECWGKLKGKAQVEWYEHLRKIDEPVRADAVMTSTVRSVAQCVANATASQEPDAGIWPIVDAFVKQRFRVSDT |
Ga0193717_10879092 | 3300020060 | Soil | MKAPLLIVAAAGLFCGFTATPDFERKTRDNVSGSIVLATQECWSKLKGKAQVEWYRHLRAIDEPGRADAVMMSTMRSVERCVAEAVGSQEYDPGLWKAVDSFVQQRFGTHRRAG |
Ga0179594_100864272 | 3300020170 | Vadose Zone Soil | MRTRLLVAAATGLFCGLTATPEYEREKVSGPIALATQECWGKLKGKAQVEWYGHLRKIDESARANAVVTSTARAVARCVVIAAGSQESHSSIWLIVDAFVKHRFGVHA |
Ga0210378_100102544 | 3300021073 | Groundwater Sediment | MRTRLLVVAAAGLFCGFTATPEYERPGRGNVSGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATASQEPAASIWPIVDAFVKQRFRVSDT |
Ga0210381_103368461 | 3300021078 | Groundwater Sediment | VVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVARCVATTAGSQEPDASIWPIVDAFVRHRFGV |
Ga0210382_100242983 | 3300021080 | Groundwater Sediment | VVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVARCVATTAGSQESDASIWLIVDAFVKHR |
Ga0210377_100137333 | 3300021090 | Groundwater Sediment | MRARVLVVAAAGLVCGFTATPVYERNARENISRSIALATQECWGKLKGKAQVEWYGHLRTIDEPARADAVMTWTVSSVARCVATDTGSREHDPSAGRIVDAFVKQRFRVP |
Ga0193719_100034423 | 3300021344 | Soil | VVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDQSPRANAVVTSTARSVARCVATTAGSQEPDASIWPIVDAFVRHRFGVPAERGHSTPADPPT |
Ga0224452_10197032 | 3300022534 | Groundwater Sediment | VRTRVLVVAAAGLFCGFTATPEYERPGRENVSGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATASQEPDASIWPIVDAFVKQRFRVSDT |
Ga0222623_101894582 | 3300022694 | Groundwater Sediment | VRTRVLVVAAAGLFCGFTATPEYERPGRETVSGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATASQAPDASIWPIVDAFVKQRFRVSDT |
Ga0207707_106501391 | 3300025912 | Corn Rhizosphere | YERQGRDNVGGAIAVATQECWSKVKGKAQVEWYGHLRKIDQSIRGDAVVNWTATSVARCVAEATGSHAHDPSISQLVDAFVKERFHVPDIRASR |
Ga0207660_105672201 | 3300025917 | Corn Rhizosphere | MRASLLVVAAAGLFCGITATPGYERQGRDNVGGAIAVATQECWSKVKGKAQVEWYGHLRKIDQSIRGDAVVNWTAKSVARCVAEATGSHAHDPSISQLVDAFVKERFHVPDIRASR |
Ga0257173_10000682 | 3300026360 | Soil | MRTRVLVVAAAGLLCGFTATPVYERKARENVSRSIAVATQECWGKLKGTAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFVKQRFRVP |
Ga0257177_10001212 | 3300026480 | Soil | MRTRVLVVAAAGLLCGFTATPVYERKARENVSRSSAVATQECWGKLKGTAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFMKQRFRVP |
Ga0256867_100097193 | 3300026535 | Soil | MMRGLVVVAAAVSLFGGFTLAPEYEWRVREKVSAPIAVATQECWSKLKGKAQVEWYGHLRKIDETGHAEAVMTSTRKSVVECVADALGSQEPDPSIWPIVDAFVKQRFAVPETRADRGTPPRSG |
Ga0209726_100208355 | 3300027815 | Groundwater | MRGRVLVVAAAGLFCGFTATPEYERRPREPVSAPIALATEECWGQLKGKAQVEWYGHLRKIDETARAESVMTSTTTSLVLCVADAAGSQEPDPTIWPIVDAFVKHRFGVPAE |
Ga0209180_100072514 | 3300027846 | Vadose Zone Soil | MRTRVLVVAAAGLLCGFTATPVYERKARENVSRSIAVATQECWGKLKGKAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFMKQRFRVP |
Ga0209590_106730992 | 3300027882 | Vadose Zone Soil | SRANHVGAEAVMKTRLLVAAAAGLFCGFTATPEYEREKVSGPIALATQECWGKLKGKAQVEWHGHLRKIDESARANAVVTSTARAVARCVVTATGSQEPESSIWLIVDAFVKHRFGVHAEAEHTTTADPAT |
Ga0209382_100827081 | 3300027909 | Populus Rhizosphere | VRTRLLVVAAAGLFGGLTATLGYERPARENVSDPIALATQECWRTLKGKAQVEWYQHLRKIDEAARAAAVKTSTVTSVVQCVTEATGSQEPDPSIWPIVDAFVKQRFRASET |
Ga0137415_100487823 | 3300028536 | Vadose Zone Soil | MRTRLLVAAATGLFCGLTATPEYEREKVSGPIALATQECWGKLKGKAQVEWYGHLRKIDESARANAVVTSTARAVARCVVIAAGSQESHSSIWLIVDAFVKHRFGVHAEVEHTTTADPAT |
Ga0257175_10487271 | 3300028673 | Soil | RCRSRTPLWIHGHPVYERKARENVSRSIAVATQECWGKLKGTAQVEWYGHLRTIDEPARADAVMTWTARSVARCVATDTGSQEHDPSTRRIVDAFVKQRFRVP |
Ga0307293_101841771 | 3300028711 | Soil | LVVAPPSRANHVLVEALMRRRLLVVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVAQCVATTAGSQEPDASIWPIVDAFVRHRFGVPAEVEHTTTADPAT |
Ga0307323_102260981 | 3300028787 | Soil | ALVVAPPSRANHVLVEALMRRRLLVVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVARCVATTAGSQEPDASIWPIVDAFVRHRFGVPAERGHSTPADPPT |
Ga0307312_100843762 | 3300028828 | Soil | VVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVARCVATTAGSQEPDASIWPIVDAFVRHRFGVPAELEHTTTADPAT |
Ga0307308_105564141 | 3300028884 | Soil | MRRRLLVVAATGLFCGFTATPSYEGEKGPGPIALATQECWGKLKGKAQVEWYAHLRKIDEPARANAVVTSTARSVARCVATTAGSQEPDASIWPIVDAFVRHRFGVPAE |
Ga0299907_103524172 | 3300030006 | Soil | MMRGLVVVAAAVSLFGGFTLAPEYEWRVREKVSAPIAVATQECWSKLKGKAQVEWYGHLRKIDETGHAEAVMTSTRKSVVECVADALGSQEPDPSIWPIVDAFVKQRFGVPETRADRGTHPRSG |
(restricted) Ga0255311_11213831 | 3300031150 | Sandy Soil | MRGRFLVVAAVGLVCGSTVTPEYDRQATPIALATQECWGQLKGKAQVEWYGHLRKIDEPARAEAVRTSTTRSVGQCVAGAAGSQEPDPSIWPIVDAFVKHRFAVPAE |
(restricted) Ga0255310_100780462 | 3300031197 | Sandy Soil | MKKIPLLVIAAAGLFCGFTATPDYERQARENVRGSIALATQECWTSLKGKAQVEWYRHLRAIDEPGRADAVMMSTMRSVEQCVASTADAQEYDPSLWKTVDTFV |
(restricted) Ga0255310_100848662 | 3300031197 | Sandy Soil | MRGRFLVVAAVGLVCGSTVTPEYDRQASPIALATQECWGQLKGKAQVEWYGHLRKIDEPARAEAVRTSTTRSVGQCVASAAGSQEPDPSIWPIVDAFVKYRFAVPAE |
(restricted) Ga0255310_101150601 | 3300031197 | Sandy Soil | SEANMRPSLLLVAVAGLFCGFTATPDYERQVRESASGSIALATEECWGKHKGKAQAEWYAHLRKIDESARADAVVTWTTKSVARCVTHATGSHAHDPSIWQIVDTLVKQRFHVQSR |
Ga0299913_103544281 | 3300031229 | Soil | MMRGLLVVAAAVGLFGGFTLAPEYEWRVREKVSAPIAVATQECWSKLMGKAQVEWYGHLRKIDETGRAEAVMTSTRKSVVECVADALGSQEPDPSIWPIVDAFVKQRFAVPETRA |
(restricted) Ga0255334_10155562 | 3300031237 | Sandy Soil | MRGRFLVVAAVGLVCGSTVTPEYDRQASPIALATQECWGQLKGKAQVEWYGHLRKIDEPARAEAVRTSTTRSVGQCVAGAAGSQEPDPSIWPIVDAFVKHRFAVPAE |
(restricted) Ga0255312_10066841 | 3300031248 | Sandy Soil | MRGRFLVVAAVGLVCGSTVTPEYDRQASPIALATQECWGQLKGKAQVEWYGHLRKIDEPARAEAVRTSTTRSVGQCVASAAGSQEPDPSIWPIVDAFVKHRFAVPAE |
(restricted) Ga0255312_10255612 | 3300031248 | Sandy Soil | MRPSLLLVAVAGLFCGFTATPDYERQVRESASGSIALATEECWGKHKGKAQAEWYAHLRKIDESARADAVVTWTTKSVAGCVTHATGSHAHDPSIWQIVDTLVKQRFHVQSR |
Ga0307468_1014461311 | 3300031740 | Hardwood Forest Soil | MRAPLLVVAAASLFCGFTATPGYERQARENVDGAIAMATQECWGKVKGKAQVEWYGHLRKIDQSIRADAVVIWTSKSVARCVAHATGSHAHDPSISRFVDAFVKERFHVPDIRASRRTQPRSG |
Ga0307471_1020551681 | 3300032180 | Hardwood Forest Soil | MRASLVVIAAATLFCGFTATPEHERKTRQTARDSITQATQECWTKLKGKAQVEWYGHLRKIDEPGRADAIMMSTMRAVERCVEDAVGSHGYDPALWKTVDTFVQVRFGTHRRAG |
Ga0307471_1040699651 | 3300032180 | Hardwood Forest Soil | ERQARESVAGAIAVATQECWGKVKGKAQVEWYGHLRKIDQSIRADAVVIWTSKSVARCVAHATGSHAHDPSISRFVDAFVKERFHVPDIRASRRTQPRSG |
Ga0316628_1015097541 | 3300033513 | Soil | MRGRFLVVAAVGLVCGSTVTPGYDRQASPIALATQECWGQLKGKAQVEWYGHLRKIDEPARAEAVRTSTTRSVGQCVASAAGSQEPDPSIWPIVDAFVKHRFAVPAE |
Ga0370498_029459_425_769 | 3300034155 | Untreated Peat Soil | MKTPLLVVAAAGLFCGFTATPEFERKTRENVSGSITLATQECWSKLKGKAQVEWYRHLRAIDEPGRADAVMMSTMRSVEQCVASAVGSQEYDPGLWKTVDAFVQQRFGTHPGAG |
Ga0364940_0050668_632_970 | 3300034164 | Sediment | MRTRILVVAAAGLFCGFTATPEYERQGRGTVSGPIALATQECWGKLKGKAQVEWYEHLRKIDETVRADAVMTSTVRSVAQCVANATGSQEPDPSIWPIVDAFVKQRFRVSDT |
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