NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F091425

Metagenome Family F091425

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F091425
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 48 residues
Representative Sequence MLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Number of Associated Samples 35
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 83.81 %
% of genes near scaffold ends (potentially truncated) 26.17 %
% of genes from short scaffolds (< 2000 bps) 85.98 %
Associated GOLD sequencing projects 34
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (58.879 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(79.439 % of family members)
Environment Ontology (ENVO) Unclassified
(94.393 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(92.523 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 66.67%    β-sheet: 0.00%    Coil/Unstructured: 33.33%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF05901Excalibur 4.67
PF05930Phage_AlpA 0.93
PF00583Acetyltransf_1 0.93
PF00589Phage_integrase 0.93
PF13649Methyltransf_25 0.93
PF16861Carbam_trans_C 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG3311DNA-binding transcriptional regulator AlpATranscription [K] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.13 %
UnclassifiedrootN/A1.87 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300007202|Ga0103274_1186946All Organisms → Viruses → Predicted Viral1344Open in IMG/M
3300007212|Ga0103958_1168467All Organisms → Viruses → Predicted Viral1105Open in IMG/M
3300008055|Ga0108970_11797967All Organisms → Viruses → Predicted Viral1055Open in IMG/M
3300010354|Ga0129333_10888238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales755Open in IMG/M
3300010354|Ga0129333_11690306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus515Open in IMG/M
3300010370|Ga0129336_10780979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus504Open in IMG/M
3300013004|Ga0164293_10148320All Organisms → Viruses → Predicted Viral1746Open in IMG/M
3300013087|Ga0163212_1159866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus711Open in IMG/M
3300013087|Ga0163212_1241483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus561Open in IMG/M
3300013087|Ga0163212_1243072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus559Open in IMG/M
3300013087|Ga0163212_1261732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus536Open in IMG/M
3300013087|Ga0163212_1268220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus529Open in IMG/M
(restricted) 3300013122|Ga0172374_1362226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus510Open in IMG/M
(restricted) 3300013123|Ga0172368_10408740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus610Open in IMG/M
(restricted) 3300013125|Ga0172369_10144817All Organisms → Viruses → Predicted Viral1450Open in IMG/M
3300017788|Ga0169931_10275303All Organisms → Viruses → Predicted Viral1349Open in IMG/M
3300017788|Ga0169931_10331208All Organisms → Viruses → Predicted Viral1172Open in IMG/M
3300017788|Ga0169931_10899248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus558Open in IMG/M
3300017788|Ga0169931_11008649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus514Open in IMG/M
3300020074|Ga0194113_10144795All Organisms → Viruses → Predicted Viral1984Open in IMG/M
3300020074|Ga0194113_10162363All Organisms → Viruses → Predicted Viral1839Open in IMG/M
3300020074|Ga0194113_10168824All Organisms → Viruses → Predicted Viral1791Open in IMG/M
3300020074|Ga0194113_10233837All Organisms → Viruses → Predicted Viral1441Open in IMG/M
3300020074|Ga0194113_10259521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus1344Open in IMG/M
3300020074|Ga0194113_10468338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus911Open in IMG/M
3300020074|Ga0194113_10562747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus809Open in IMG/M
3300020074|Ga0194113_10643390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus742Open in IMG/M
3300020074|Ga0194113_10757654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus668Open in IMG/M
3300020074|Ga0194113_10844174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus623Open in IMG/M
3300020074|Ga0194113_11097630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus525Open in IMG/M
3300020083|Ga0194111_10118287All Organisms → Viruses → Predicted Viral2085Open in IMG/M
3300020083|Ga0194111_10176182All Organisms → Viruses → Predicted Viral1595Open in IMG/M
3300020083|Ga0194111_10187356All Organisms → Viruses → Predicted Viral1529Open in IMG/M
3300020083|Ga0194111_10302517All Organisms → Viruses → Predicted Viral1100Open in IMG/M
3300020083|Ga0194111_10322423All Organisms → Viruses → Predicted Viral1053Open in IMG/M
3300020083|Ga0194111_10708922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus617Open in IMG/M
3300020083|Ga0194111_10755075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus591Open in IMG/M
3300020083|Ga0194111_10758846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales589Open in IMG/M
3300020084|Ga0194110_10171973All Organisms → Viruses → Predicted Viral1673Open in IMG/M
3300020084|Ga0194110_10391669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus942Open in IMG/M
3300020084|Ga0194110_10664592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus650Open in IMG/M
3300020084|Ga0194110_10869595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus539Open in IMG/M
3300020084|Ga0194110_10893162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus529Open in IMG/M
3300020109|Ga0194112_10484116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus871Open in IMG/M
3300020109|Ga0194112_10857423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus588Open in IMG/M
3300020179|Ga0194134_10019340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus4590Open in IMG/M
3300020179|Ga0194134_10038081All Organisms → Viruses → Predicted Viral2811Open in IMG/M
3300020179|Ga0194134_10056655All Organisms → Viruses → Predicted Viral2122Open in IMG/M
3300020179|Ga0194134_10077963All Organisms → Viruses → Predicted Viral1699Open in IMG/M
3300020179|Ga0194134_10082381All Organisms → Viruses → Predicted Viral1635Open in IMG/M
3300020179|Ga0194134_10110579All Organisms → Viruses → Predicted Viral1322Open in IMG/M
3300020179|Ga0194134_10117150All Organisms → Viruses → Predicted Viral1268Open in IMG/M
3300020179|Ga0194134_10150919All Organisms → Viruses → Predicted Viral1055Open in IMG/M
3300020179|Ga0194134_10159239All Organisms → Viruses → Predicted Viral1014Open in IMG/M
3300020179|Ga0194134_10201336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus854Open in IMG/M
3300020179|Ga0194134_10222924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus792Open in IMG/M
3300020179|Ga0194134_10371025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus538Open in IMG/M
3300020183|Ga0194115_10034124All Organisms → Viruses → Predicted Viral3519Open in IMG/M
3300020183|Ga0194115_10115578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus1465Open in IMG/M
3300020183|Ga0194115_10138590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus1286Open in IMG/M
3300020183|Ga0194115_10406636All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus583Open in IMG/M
3300020190|Ga0194118_10222850All Organisms → Viruses → Predicted Viral1055Open in IMG/M
3300020190|Ga0194118_10332030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus798Open in IMG/M
3300020190|Ga0194118_10356955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus757Open in IMG/M
3300020196|Ga0194124_10053950All Organisms → Viruses → Predicted Viral2492Open in IMG/M
3300020196|Ga0194124_10110743All Organisms → Viruses → Predicted Viral1541Open in IMG/M
3300020196|Ga0194124_10125958All Organisms → Viruses → Predicted Viral1412Open in IMG/M
3300020196|Ga0194124_10341154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus707Open in IMG/M
3300020196|Ga0194124_10448326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus577Open in IMG/M
3300020196|Ga0194124_10494714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus535Open in IMG/M
3300020196|Ga0194124_10531456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus506Open in IMG/M
3300020197|Ga0194128_10560126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus515Open in IMG/M
3300020198|Ga0194120_10154784All Organisms → Viruses → Predicted Viral1355Open in IMG/M
3300020200|Ga0194121_10193589All Organisms → Viruses → Predicted Viral1112Open in IMG/M
3300020204|Ga0194116_10041774All Organisms → Viruses → Predicted Viral3374Open in IMG/M
3300020204|Ga0194116_10212155All Organisms → Viruses → Predicted Viral1092Open in IMG/M
3300020204|Ga0194116_10276739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus898Open in IMG/M
3300020204|Ga0194116_10375407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus713Open in IMG/M
3300020204|Ga0194116_10477052All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus593Open in IMG/M
3300020204|Ga0194116_10485521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus585Open in IMG/M
3300020220|Ga0194119_10202395All Organisms → Viruses → Predicted Viral1406Open in IMG/M
3300020220|Ga0194119_10210799All Organisms → Viruses → Predicted Viral1368Open in IMG/M
3300020222|Ga0194125_10573501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. CB0101677Open in IMG/M
3300020578|Ga0194129_10081257All Organisms → Viruses → Predicted Viral2283Open in IMG/M
3300020578|Ga0194129_10327710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus842Open in IMG/M
3300020603|Ga0194126_10347017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus968Open in IMG/M
3300021091|Ga0194133_10020741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales6535Open in IMG/M
3300021091|Ga0194133_10037482All Organisms → cellular organisms → Bacteria4382Open in IMG/M
3300021091|Ga0194133_10355072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus844Open in IMG/M
3300021091|Ga0194133_10561428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus567Open in IMG/M
3300021092|Ga0194122_10115757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus1471Open in IMG/M
3300021092|Ga0194122_10199891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales1053Open in IMG/M
3300021376|Ga0194130_10037380All Organisms → Viruses → Predicted Viral3665Open in IMG/M
3300021376|Ga0194130_10041549All Organisms → Viruses → Predicted Viral3404Open in IMG/M
3300021376|Ga0194130_10134645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus1548Open in IMG/M
3300021376|Ga0194130_10171472All Organisms → Viruses → Predicted Viral1312Open in IMG/M
3300021376|Ga0194130_10213724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus1128Open in IMG/M
3300021376|Ga0194130_10250788All Organisms → Viruses → Predicted Viral1011Open in IMG/M
3300021376|Ga0194130_10455189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus665Open in IMG/M
3300021376|Ga0194130_10564130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus571Open in IMG/M
3300025283|Ga0208048_1114454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus557Open in IMG/M
(restricted) 3300027728|Ga0247836_1016196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales6032Open in IMG/M
(restricted) 3300028553|Ga0247839_1083403All Organisms → Viruses → Predicted Viral1594Open in IMG/M
3300033996|Ga0334979_0302849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales908Open in IMG/M
3300034122|Ga0335060_0533569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus600Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake79.44%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater16.82%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.80%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300007202Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Monthly Sampling-Site C) 9 sequencing projectsEnvironmentalOpen in IMG/M
3300007212Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Bottom layer) 7 sequencing projectsEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013087Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30LEnvironmentalOpen in IMG/M
3300013122 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10.3mEnvironmentalOpen in IMG/M
3300013123 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11mEnvironmentalOpen in IMG/M
3300013125 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.25mEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020083Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300mEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020109Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400mEnvironmentalOpen in IMG/M
3300020179Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0mEnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020190Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surfaceEnvironmentalOpen in IMG/M
3300020196Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0mEnvironmentalOpen in IMG/M
3300020197Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65mEnvironmentalOpen in IMG/M
3300020198Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65mEnvironmentalOpen in IMG/M
3300020200Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50mEnvironmentalOpen in IMG/M
3300020204Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surfaceEnvironmentalOpen in IMG/M
3300020220Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100mEnvironmentalOpen in IMG/M
3300020222Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250mEnvironmentalOpen in IMG/M
3300020578Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35mEnvironmentalOpen in IMG/M
3300020603Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150mEnvironmentalOpen in IMG/M
3300021091Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40mEnvironmentalOpen in IMG/M
3300021092Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015021 Mahale Deep Cast 10mEnvironmentalOpen in IMG/M
3300021376Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surfaceEnvironmentalOpen in IMG/M
3300025283Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L (SPAdes)EnvironmentalOpen in IMG/M
3300027728 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14mEnvironmentalOpen in IMG/M
3300028553 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_16mEnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300034122Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0103274_118694633300007202Freshwater LakeMLKIDDRDLEKQIAEILKKIGLKEPRDYIALRVTSDLKALKQNKKLPI*
Ga0103958_116846743300007212Freshwater LakeMLKIDDKDLEKQIAEILKKIGLKEPRDYIALRVTSDLKALKQNKKLPI*
Ga0108970_1179796723300008055EstuaryMLKIDDRQLEKQIAEIIKKSAFKEPEDYIAARVAADLKLLKQNKKLPI*
Ga0129333_1088823813300010354Freshwater To Marine Saline GradientMLKIDDRQLDKQILEIIKKTGHQDASSYIKARVAADLKLLKQNKRLSI*
Ga0129333_1169030623300010354Freshwater To Marine Saline GradientMLKIDDRQLDKQILEIIKKTGHQDASSYIKARVAADHKLIKQNKRLSI*
Ga0129336_1078097923300010370Freshwater To Marine Saline GradientMLKIDDRHLDKQILEIIKKTGHQDASSYIKARVAADHKLIKQNKRLSI*
Ga0164293_1014832043300013004FreshwaterMLKIDDRQLEKQIAEIIKKSAFKEPEDYIAARVAADLKLVKQNKKLPI*
Ga0163212_115986623300013087FreshwaterMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI*
Ga0163212_124148313300013087FreshwaterMLKIDDRQLEKQITEILKKTGFQDPKNYIAARVTADLKLLKQNKKLFI*
Ga0163212_124307223300013087FreshwaterMLKIDDKQLEKQITEILKRTGFQEPKDYITARVTSDLKLLKHNKKLSI*
Ga0163212_126173223300013087FreshwaterMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTVDLKLLKQNKKLSI*
Ga0163212_126822013300013087FreshwaterMLKIDDRQLEKQMAEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI*
(restricted) Ga0172374_136222623300013122FreshwaterMLKIDDRQLEKQITEILKRTGFQESKDYIAARVTADLKLLKQNKKLSI*
(restricted) Ga0172368_1040874033300013123FreshwaterMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLRL
(restricted) Ga0172369_1014481723300013125FreshwaterMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLRLLKQNKKLSI*
Ga0169931_1027530333300017788FreshwaterMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLRLLKQNKKLSI
Ga0169931_1033120833300017788FreshwaterMLKIDDRQLEKQITEILKRTGFQEPNDYIAARVTADLKMLKQNKKLSI
Ga0169931_1089924823300017788FreshwaterMLKIDDRQLEKQITEILKRTGFQEPKDYITARVTSDLKLLKQNKKLSI
Ga0169931_1100864933300017788FreshwaterMLKIDDKQLEKQIIEILKRTGFQESKDYIAARVTADLKLLKQ
Ga0194113_1014479553300020074Freshwater LakeMLKIDDRQLEKQITEILKRMGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194113_1016236343300020074Freshwater LakeMLKIEDRQLEKQITEILKRTGFQEPKDYIAARVTSDLKLLKQNKKLSI
Ga0194113_1016882453300020074Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYITARVTAD
Ga0194113_1023383743300020074Freshwater LakeMLKIDDRQLEKQIIEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194113_1025952123300020074Freshwater LakeMLKIDDKQLEKQIAEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194113_1046833843300020074Freshwater LakeMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVTADLKLL
Ga0194113_1056274723300020074Freshwater LakeMLKIDDRQLEKQITEVLKRTGIQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194113_1064339023300020074Freshwater LakeMLKIDDRQLEKQITEILKKTGFQEPRDYIAARVTADLKLLKQNKKLSI
Ga0194113_1075765413300020074Freshwater LakeMLKIDDRHLEKQMAEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194113_1084417423300020074Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTSDLKLLKQNKKVSI
Ga0194113_1109763023300020074Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQNKKLFI
Ga0194111_1011828723300020083Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194111_1017618243300020083Freshwater LakeMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194111_1018735643300020083Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYITARVTSDLKLLKHNKKLSI
Ga0194111_1030251733300020083Freshwater LakeMLKIDDKQLEKQITEILNRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194111_1032242343300020083Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTVDLKLLKQNKKLSI
Ga0194111_1070892213300020083Freshwater LakeLEKQITEILKRTGFQEPKDYIAARVTSDLKLLKQNKKVFI
Ga0194111_1075507523300020083Freshwater LakeMLKIDDRQLEKQMAEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194111_1075884623300020083Freshwater LakeIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194110_1017197353300020084Freshwater LakeMLRIDDKQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194110_1039166933300020084Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTSDLKLLKQNKKLSI
Ga0194110_1066459223300020084Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQNKKFSI
Ga0194110_1086959513300020084Freshwater LakeMLKIDDRQLEKQITEILKRTGFQESKDYIAARVTADLKLLKQNKKLSIXSPSPSYEKSL
Ga0194110_1089316223300020084Freshwater LakeMLKIDDRQLEKQITEILKKTGFQDPKNYIAARVTADLKLLRQNKKLSIXSPFQSY
Ga0194112_1048411613300020109Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQNKKLFIXSPSQSYEKSLR
Ga0194112_1085742333300020109Freshwater LakeMLKIDDKQLEKQITEILNRTGFQEPKDYIAARVTADLKLLKQNKKLSIXSPSQSYEKSLR
Ga0194134_1001934023300020179Freshwater LakeMLKIDDRQLEKQLTEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194134_1003808133300020179Freshwater LakeMLKIDDRQLEKQITDILKKTGFQEPKDYIAARVMADLKLLKQNKKLSI
Ga0194134_1005665543300020179Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIRARVTADLKLLKQNKKLSI
Ga0194134_1007796323300020179Freshwater LakeMLKIDDRQLEKQISEILKRTGFQEPKDYIAARVTADLKLLKHNKKLSI
Ga0194134_1008238133300020179Freshwater LakeMLKIDDRQLERQITEILKRTGFQESKDYIAARVTVDLKLLKQNKKLSI
Ga0194134_1011057913300020179Freshwater LakeMLKIDDRQLEKQITEILKRTAFQEPKDYIAARVTVDLKLLKQNKKLSI
Ga0194134_1011715033300020179Freshwater LakeMLKIDDKQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQKKKLSI
Ga0194134_1015091943300020179Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTVDLKLLKQNKQLSI
Ga0194134_1015923933300020179Freshwater LakeMLKIDNRQLEKQITEILKRTGIQEPKDYIAARVTADLKLLKQNKKLSIXLHFQSYEKSLRPIT
Ga0194134_1020133623300020179Freshwater LakeMLKIDDKQLEKQITEILKRTGFQEPRDYIAARVTADLKMLKQNKKLSI
Ga0194134_1022292423300020179Freshwater LakeMLKIDDKQLERQITEILKRTGFQESKDYIAARVTADLKLLKQNKKLSI
Ga0194134_1037102523300020179Freshwater LakeMLKIDDRQLEKQIIEILKRTGFQEPKDYIPARVTVDLKLLKQNKKLSI
Ga0194115_1003412423300020183Freshwater LakeMLKIDDRQLEKQIIEILKRTGFQEPKDYIAARVTVDLKLLKQNKKLSI
Ga0194115_1011557823300020183Freshwater LakeMLKIDDRQLERQITEILKRTGFQESKDYIAARVTADLKLLKQNKKLSI
Ga0194115_1013859013300020183Freshwater LakeLKIDDKQLEKQITEILKKTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194115_1040663613300020183Freshwater LakeMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVTAD
Ga0194118_1022285023300020190Freshwater LakeMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVTADLKSLRQNKKLSI
Ga0194118_1033203023300020190Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAVRVTADLKLLKQNKKLSI
Ga0194118_1035695513300020190Freshwater LakeRTQRRLRRFGKSSKRGILKMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQKKKLSI
Ga0194124_1005395063300020196Freshwater LakeILKMLKIDDKQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQKKKLSI
Ga0194124_1011074323300020196Freshwater LakeMLKIDDKQLEKQITEILNRTGPQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194124_1012595853300020196Freshwater LakeMLKIDDKQLEKQILDILKRTGFQEPKDYIAARVTADLKLLKQNKKLST
Ga0194124_1034115423300020196Freshwater LakeMLKIDDRQLEKQITEVLKRTAFQEPKDYITARVTADLKLLKQNKKLSI
Ga0194124_1044832623300020196Freshwater LakeMLKIDDRQLEKQITEILKRTGFQESKDYIAARVTADLKLLKQNKKLSI
Ga0194124_1049471423300020196Freshwater LakeMLKIDDKQLEKQITEILKKTGYQEPKDYIAARVTADLKLLKQNKKLSIXSPFQSF
Ga0194124_1053145623300020196Freshwater LakeILKMLKIDDRQLEKQIIEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194128_1056012623300020197Freshwater LakeMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVTADLKLLKQNKKLSV
Ga0194128_1056314633300020197Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTVDLK
Ga0194120_1015478423300020198Freshwater LakeMLKIDDRQLEKQITEILKRMGFQEPKDYIAARVTADLKMLKQNKKLSI
Ga0194121_1019358933300020200Freshwater LakeMLKIDDRQLEKQMTEILKRTGFQEPKDYIAARVAADLKLLKQNKKLSI
Ga0194116_1004177473300020204Freshwater LakeGILKMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQKKKLSI
Ga0194116_1021215543300020204Freshwater LakeMLKIDDKQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194116_1027673943300020204Freshwater LakeMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVAADLKLLKQNKKLSI
Ga0194116_1037540723300020204Freshwater LakeMLKIDDRQVEKQISEILKRTGFQEPKDYIAARVTADLKLLKHNKKLSI
Ga0194116_1047705223300020204Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKMLKQNKKLSI
Ga0194116_1048552123300020204Freshwater LakeMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVTSDLKLLKQNKKLSI
Ga0194119_1020239523300020220Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAGRVTADLKLLKQNKKLFI
Ga0194119_1021079913300020220Freshwater LakeMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVTADLKLLKQNKKLFI
Ga0194125_1057350133300020222Freshwater LakeITEILNRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194129_1008125753300020578Freshwater LakeFRKSSKTGILKMLKIDDRQLEKQITDILKKTGFQEPKDYIAARVMADLKLLKQNKKLSI
Ga0194129_1032771033300020578Freshwater LakeMLKIDDRQLEKQITDILKKTGFQEPKDYIAARVTSDLKLLKQNKKLSI
Ga0194126_1034701743300020603Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLKQNKKLFIXSLSQSYEKSLRPI
Ga0194133_1002074153300021091Freshwater LakeMLKIDDRQLEKQISEILKRTGFQEPKDYIVARVIADLKLLKQNKKVSI
Ga0194133_10037482103300021091Freshwater LakeMQKIDDRQLEKQLTEILKRTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194133_1035507223300021091Freshwater LakeQLERQITEILKRTGFQESKDYIAARVTADLKLLKQNKKLSI
Ga0194133_1055598233300021091Freshwater LakeMLKIDDRQLEKQITEILKRTGIQEPKDYIAVRVTA
Ga0194133_1056142813300021091Freshwater LakeLKMLKIDDRQLEKQISEILKRTGFQEPKDYIAARVTADLKLLKHNKKLSI
Ga0194122_1011575713300021092Freshwater LakeDRQLEKQITEILKRTGIQEPKDYIAARVTADLKLLKQNKKLFI
Ga0194122_1019989113300021092Freshwater LakeRGILEMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194130_1003738053300021376Freshwater LakeMLKIDDKQLEKQITEILKKTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194130_1004154963300021376Freshwater LakeMLKIDDKQLEKQITDILKRTGFQEPKDYIAARVTADLKLLKQNKKLST
Ga0194130_1013464553300021376Freshwater LakeMLKIDNRQLEKQITEILKRTGIQEPKDYIAARVTADLKLLKQNKKLS
Ga0194130_1017147233300021376Freshwater LakeMLKIDDRQLEKQITEILKKTGFQEPKDYIAARVTADLKLLKQNKKLSI
Ga0194130_1021372413300021376Freshwater LakeDRQLEKQITEILKRTGFQEPNDYIAARVTVDLKLLKQNKKLSI
Ga0194130_1025078823300021376Freshwater LakeMLKIDDRQLEKQITEILKRTGFQEPKDYIAARVTADLKLLRQNKKLSI
Ga0194130_1045518933300021376Freshwater LakeMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVTADLKMLKQNKKLSI
Ga0194130_1056413023300021376Freshwater LakeMLKIDDRQLEKQMAEILKRTGIQEPKDYIAARVTADLKLLKQNKKLSI
Ga0208048_111445423300025283FreshwaterMLKIDDRQLEKQITEILKRTGIQEPKDYIAARVTADLKLLKHNKKLSI
(restricted) Ga0247836_101619633300027728FreshwaterMLKIDDRNLEKQITEILKRTGFQEPKDYIAARVMVDLKALKQNKKLSI
(restricted) Ga0247839_108340333300028553FreshwaterMFKIDDRNLEKQITEILKRTGFQEPKDYIAARVMVDLKALKQNKKLSI
Ga0334979_0302849_734_8803300033996FreshwaterMLKIDDRQLEKQIAEIIKKSAFKEPEDYIAARVAADLKLVKQNKKLPI
Ga0335060_0533569_444_5903300034122FreshwaterMLKTDDRQLEKQIAEIIKKSAFKEPEDYIAARVAADLKLVKQNKKLPI


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