NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F091391

Metagenome Family F091391

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F091391
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 57 residues
Representative Sequence MAEIYTFTPKQKPTDENVELNRLRAKLLELHEIRDTLNKEIRYTKDAIKLLEKGEK
Number of Associated Samples 59
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 8.41 %
% of genes near scaffold ends (potentially truncated) 12.15 %
% of genes from short scaffolds (< 2000 bps) 71.96 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (63.551 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater
(18.692 % of family members)
Environment Ontology (ENVO) Unclassified
(52.336 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(62.617 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.24%    β-sheet: 0.00%    Coil/Unstructured: 54.76%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00768Peptidase_S11 24.30
PF13580SIS_2 15.89
PF00565SNase 3.74
PF137592OG-FeII_Oxy_5 3.74
PF12849PBP_like_2 1.87
PF02562PhoH 0.93
PF00011HSP20 0.93
PF07396Porin_O_P 0.93
PF02867Ribonuc_red_lgC 0.93
PF00574CLP_protease 0.93
PF13506Glyco_transf_21 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 24.30
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.87
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 1.87
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.93
COG0209Ribonucleotide reductase alpha subunitNucleotide transport and metabolism [F] 0.93
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 0.93
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 0.93
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 0.93
COG3746Phosphate-selective porinInorganic ion transport and metabolism [P] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A63.55 %
All OrganismsrootAll Organisms36.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001838|RCM33_1025700All Organisms → Viruses → Predicted Viral1127Open in IMG/M
3300001838|RCM33_1082041Not Available569Open in IMG/M
3300001850|RCM37_1043567Not Available2426Open in IMG/M
3300002200|metazooDRAFT_1274244Not Available744Open in IMG/M
3300002203|metazooDRAFT_1287780Not Available563Open in IMG/M
3300002408|B570J29032_109927650All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2923Open in IMG/M
3300002476|metazooDRAFT_10757157Not Available532Open in IMG/M
3300002476|metazooDRAFT_10894440Not Available1062Open in IMG/M
3300002835|B570J40625_100649590Not Available955Open in IMG/M
3300004112|Ga0065166_10175700Not Available831Open in IMG/M
3300004112|Ga0065166_10526212Not Available502Open in IMG/M
3300004240|Ga0007787_10030925All Organisms → Viruses → Predicted Viral2310Open in IMG/M
3300005527|Ga0068876_10011242Not Available5881Open in IMG/M
3300005527|Ga0068876_10089779All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1839Open in IMG/M
3300005527|Ga0068876_10249721All Organisms → Viruses → Predicted Viral1018Open in IMG/M
3300005527|Ga0068876_10538791Not Available638Open in IMG/M
3300005581|Ga0049081_10000504Not Available14989Open in IMG/M
3300005662|Ga0078894_10255879All Organisms → Viruses → Predicted Viral1588Open in IMG/M
3300005805|Ga0079957_1086620All Organisms → cellular organisms → Bacteria1751Open in IMG/M
3300005805|Ga0079957_1115646All Organisms → Viruses → Predicted Viral1429Open in IMG/M
3300005805|Ga0079957_1142108Not Available1234Open in IMG/M
3300007363|Ga0075458_10249996Not Available540Open in IMG/M
3300008110|Ga0114343_1061676All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1407Open in IMG/M
3300008114|Ga0114347_1056800All Organisms → Viruses → Predicted Viral1644Open in IMG/M
3300008114|Ga0114347_1236446Not Available574Open in IMG/M
3300008116|Ga0114350_1001486All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage13333Open in IMG/M
3300008116|Ga0114350_1005545Not Available6196Open in IMG/M
3300008116|Ga0114350_1026472All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2925Open in IMG/M
3300008116|Ga0114350_1039099Not Available1810Open in IMG/M
3300008116|Ga0114350_1063720Not Available1285Open in IMG/M
3300008116|Ga0114350_1070069Not Available1199Open in IMG/M
3300008120|Ga0114355_1000862Not Available68741Open in IMG/M
3300008120|Ga0114355_1091512Not Available1221Open in IMG/M
3300008120|Ga0114355_1176858Not Available721Open in IMG/M
3300008258|Ga0114840_1027081Not Available944Open in IMG/M
3300008450|Ga0114880_1014188All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3840Open in IMG/M
3300010354|Ga0129333_10136142Not Available2258Open in IMG/M
3300010354|Ga0129333_10378311All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1256Open in IMG/M
3300010354|Ga0129333_10453007All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-111130Open in IMG/M
3300010354|Ga0129333_10724327Not Available853Open in IMG/M
3300010354|Ga0129333_10762373Not Available828Open in IMG/M
3300010354|Ga0129333_10796617All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage806Open in IMG/M
3300010354|Ga0129333_11622817Not Available527Open in IMG/M
3300011113|Ga0151517_1022Not Available84838Open in IMG/M
3300011113|Ga0151517_1665Not Available11526Open in IMG/M
3300012013|Ga0153805_1052311Not Available692Open in IMG/M
3300012017|Ga0153801_1046434Not Available766Open in IMG/M
3300013005|Ga0164292_10347785Not Available1002Open in IMG/M
(restricted) 3300013126|Ga0172367_10102034All Organisms → Viruses → Predicted Viral2017Open in IMG/M
3300017766|Ga0181343_1000468All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage17615Open in IMG/M
3300017788|Ga0169931_10048178All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4640Open in IMG/M
3300020074|Ga0194113_10742906Not Available677Open in IMG/M
3300020084|Ga0194110_10276683Not Available1203Open in IMG/M
3300020172|Ga0211729_10355091All Organisms → Viruses → Predicted Viral1632Open in IMG/M
3300020183|Ga0194115_10012174All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage7685Open in IMG/M
3300020183|Ga0194115_10090797All Organisms → Viruses → Predicted Viral1736Open in IMG/M
3300020183|Ga0194115_10169379Not Available1114Open in IMG/M
3300020183|Ga0194115_10301687Not Available731Open in IMG/M
3300020183|Ga0194115_10359469Not Available641Open in IMG/M
3300020190|Ga0194118_10020491Not Available5044Open in IMG/M
3300020196|Ga0194124_10318532Not Available744Open in IMG/M
3300020533|Ga0208364_1023049Not Available868Open in IMG/M
3300020603|Ga0194126_10158245Not Available1697Open in IMG/M
3300021424|Ga0194117_10077749All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1823Open in IMG/M
3300021959|Ga0222716_10587309Not Available611Open in IMG/M
3300021961|Ga0222714_10293092Not Available895Open in IMG/M
3300021962|Ga0222713_10193220All Organisms → Viruses → Predicted Viral1368Open in IMG/M
3300022179|Ga0181353_1005880Not Available2921Open in IMG/M
3300022179|Ga0181353_1015527All Organisms → Viruses → Predicted Viral1972Open in IMG/M
3300022752|Ga0214917_10123058All Organisms → Viruses → Predicted Viral1441Open in IMG/M
3300024500|Ga0255143_1076986Not Available536Open in IMG/M
3300027608|Ga0208974_1005176Not Available4502Open in IMG/M
3300027793|Ga0209972_10017196All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4554Open in IMG/M
3300027793|Ga0209972_10212615Not Available890Open in IMG/M
3300027793|Ga0209972_10307412Not Available697Open in IMG/M
3300027816|Ga0209990_10117665Not Available1278Open in IMG/M
3300027816|Ga0209990_10204966Not Available913Open in IMG/M
3300027816|Ga0209990_10519903Not Available501Open in IMG/M
3300029930|Ga0119944_1002912All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2908Open in IMG/M
3300029930|Ga0119944_1043584Not Available550Open in IMG/M
3300031758|Ga0315907_10002573Not Available22558Open in IMG/M
3300031758|Ga0315907_10136604Not Available2084Open in IMG/M
3300031758|Ga0315907_10205960All Organisms → Viruses → Predicted Viral1646Open in IMG/M
3300031758|Ga0315907_10424044All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1068Open in IMG/M
3300031758|Ga0315907_10840134Not Available681Open in IMG/M
3300031758|Ga0315907_11079108Not Available573Open in IMG/M
3300031758|Ga0315907_11234440Not Available521Open in IMG/M
3300031787|Ga0315900_10544182Not Available866Open in IMG/M
3300031857|Ga0315909_10008913All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage10931Open in IMG/M
3300031857|Ga0315909_10165366All Organisms → Viruses → Predicted Viral1800Open in IMG/M
3300031951|Ga0315904_10077646All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3569Open in IMG/M
3300031951|Ga0315904_10225375All Organisms → Viruses → Predicted Viral1817Open in IMG/M
3300031951|Ga0315904_10452605All Organisms → Viruses → Predicted Viral1147Open in IMG/M
3300031951|Ga0315904_11024443Not Available652Open in IMG/M
3300031963|Ga0315901_10455419All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C281010Open in IMG/M
3300031963|Ga0315901_11027730Not Available573Open in IMG/M
3300032050|Ga0315906_10050756All Organisms → Viruses → Predicted Viral4323Open in IMG/M
3300032050|Ga0315906_10729153Not Available790Open in IMG/M
3300032093|Ga0315902_10811969Not Available737Open in IMG/M
3300032116|Ga0315903_10864214Not Available651Open in IMG/M
3300033994|Ga0334996_0000277All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes30609Open in IMG/M
3300034102|Ga0335029_0211425Not Available1280Open in IMG/M
3300034106|Ga0335036_0003620Not Available13267Open in IMG/M
3300034106|Ga0335036_0039687All Organisms → Viruses → Predicted Viral3656Open in IMG/M
3300034106|Ga0335036_0541845Not Available717Open in IMG/M
3300034106|Ga0335036_0603534Not Available666Open in IMG/M
3300034116|Ga0335068_0446769Not Available609Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater18.69%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake15.89%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton12.15%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake11.21%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.28%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient6.54%
LakeEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake3.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.74%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake2.80%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton2.80%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.80%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater1.87%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic1.87%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic1.87%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.93%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.93%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001838Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM33, ROCA_DNA217_0.2um_bLM_C_2aEnvironmentalOpen in IMG/M
3300001850Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2aEnvironmentalOpen in IMG/M
3300002200Freshwater microbial communities from San Paulo Zoo lake, Brazil - APR 2013EnvironmentalOpen in IMG/M
3300002203Freshwater microbial communities from San Paulo Zoo lake, Brazil - MAR 2013EnvironmentalOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300002476Freshwater microbial communities from San Paulo Zoo lake, Brazil - NOV 2012EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008114Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008258Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NAEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300011113Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015SepEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300012017Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020190Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surfaceEnvironmentalOpen in IMG/M
3300020196Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0mEnvironmentalOpen in IMG/M
3300020533Freshwater microbial communities from Lake Mendota, WI - 08JUN2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020603Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150mEnvironmentalOpen in IMG/M
3300021424Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surfaceEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300024500Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0hEnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027793Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300029930Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034116Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOREnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
RCM33_102570013300001838Marine PlanktonMATIYTFTPKSVVKDETEMDRLRVKLLELYEVRDALNKEIRYTKDAINSIEKGKQ*
RCM33_108204123300001838Marine PlanktonMAEIYTFIPKQKPQPDTAELDRLRVKLLELHESRDAINKEIRYIKDAINLLEKGEQ*
RCM37_104356733300001850Marine PlanktonMATIYTFTPKPVVKNDTELEKLRSKLLELHEVRDTINKEIRYIKDAIILLEKGEQ*
metazooDRAFT_127424423300002200LakeMAEIYTFVPKQKPQVDNTELDRLRAKLLEIHEARDALNKEIRYIKDAINLLEKGEK*
metazooDRAFT_128778033300002203LakeMAEIYTFTPKQKSTEQNVELNRLRARLLELHEVRDTLNKEIRYTKDAINLLEKGEK*
B570J29032_10992765033300002408FreshwaterMAEIYTFTPKQKSVDENAEINRLRAKLLELHEIRDTLNKEIRFTKDAINLLEKGEK*
metazooDRAFT_1075715713300002476LakeMAEIYTFIPKQKPQVDNTELDRLRAKLLEIHEARDALNKEIRYIKDAINLLEKGEK*
metazooDRAFT_1089444023300002476LakeMAEIYTFVPKQKPKESSELDRLRAKLLELHECRDSINKEIRFIKDAIILLEKGEK*
B570J40625_10064959023300002835FreshwaterMAEIYTFTPKQKPTDENVELNRLRAKLLELHEIRDTLNKEIRYTKDAIKLLEKGEK*
Ga0065166_1017570013300004112Freshwater LakeMADIYTFTPKYKPEKSIELDRLRAKLMELHEARDALNKEIRYTKDAITLLEKGEK*
Ga0065166_1052621223300004112Freshwater LakeMAEIYTFTPKQKPKIEDSIELDRLKAKLLELHEIRDTLNKEIRYTKDAITLLEKGEK*
Ga0007787_1003092513300004240Freshwater LakeMAEIYTFTPKQKPKIENSIELDRLRAKLLELHEVRDTLNKEIRYTKDAITLLEKGEK*
Ga0068876_10011242133300005527Freshwater LakeMAEIYTFTPKQKNSEETVELNRLRAKLLELHEVRDTLNKEIRYTKDAINLLEKGEK*
Ga0068876_1008977943300005527Freshwater LakeMAEIYTFTPKQKSTEENAELNRLRAKLLELHEVRDALNKEIRFTKDAINLLEKGEK*
Ga0068876_1024972123300005527Freshwater LakeMAEIYTFTPKQKSCEEDVELNRLRAKLLELHDVRDTINKEIRFTKDAINLLEKGEK*
Ga0068876_1053879133300005527Freshwater LakeLTTIDSDDKLSIMAEIYTFTPKQKSTEENAELNRLRSKLLELHEIRDALNKEIRFTKDAINLLEKGEK*
Ga0049081_10000504123300005581Freshwater LenticMAEIYTFTPKTKPQRFIELDRLRAKLLELHEARDALNKEIRYTKDAITLLEKGEK*
Ga0078894_1025587923300005662Freshwater LakeMAEIYTFTPKQNPKIENSIELDRLKVKLLELYEVRDTLNKEIRYTKDAITLLEKGEK*
Ga0079957_108662023300005805LakeMADIYTFTPKQKPKNEDNVELNRLRVKLLELHEVRDALNKEIRYTKDAINLLEKGEK*
Ga0079957_111564643300005805LakeMAEIYTFVPKQKPQVDNTELDRLRAKLLEIHEARDALNREIRFIKDAINLLEKGEK*
Ga0079957_114210833300005805LakeMAEIYTFIPKQKPQVDNTELDRLRAKLLEIHEARDALNREIRFIKDAINLLEKGEK*
Ga0075458_1024999623300007363AqueousMADIYTFTPKFKPEKSIELDRLRVKLMELHEARDALNKEIRYTKDAIILLEKGEK*
Ga0114343_106167613300008110Freshwater, PlanktonMAEIYTFTPKQKPKIENSIELDRLKAKLLELYEVRDTLNKEIRYTKDAITLLEKGEK*
Ga0114347_105680033300008114Freshwater, PlanktonLTKIDSDDKLSIMAEIYTFTPKKKSTDENEELNRLRAKLLELHEIRDALNKEIRYTKDAIKLLEKGEK*
Ga0114347_123644613300008114Freshwater, PlanktonLTKINGSDKLSIMAEIYTFTPKQKSKEESVELNRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGEK*
Ga0114350_100148683300008116Freshwater, PlanktonMAEIYTFIPKQKCKVDNTELDRLRAKLLELHNARDVINKEIRYTKDAINLLEKGEK*
Ga0114350_100554533300008116Freshwater, PlanktonLTIIFDNVKLSNMAEIYTFTPKQKNSEETVELNRLRAKLLELHEVRDTLNKEIRYTKDAINLLEKGEK*
Ga0114350_102647223300008116Freshwater, PlanktonLTRIDSDDKLSIMAEIYTFTPKQRNTEENVELNRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGEK*
Ga0114350_103909923300008116Freshwater, PlanktonLTKIDSDDKLSIMAEIYTFTPKQKPTDENVELNRLRAKLLELHEIRDTLNKEIRYTKDAIKLLEKGEK*
Ga0114350_106372023300008116Freshwater, PlanktonMAEIYTFTPKQKSKPDNTELDRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGEK*
Ga0114350_107006933300008116Freshwater, PlanktonLTTIDSDDKLSIMAEIYTFTPKQKSTEENAELNRLRAKLLELHEVRDALNKEIRFTKDAINLLEKGEK*
Ga0114355_100086273300008120Freshwater, PlanktonMAEIYTFIPKQKCKVDNTELDRLRAKLLELHNARDVINKEIRYTKDAIKLLEKGEK*
Ga0114355_109151223300008120Freshwater, PlanktonLTIIDSDDKLSIMAEIYTFTPKQKSNDEDVELDRLRAKLLELHDIRDTLNKEIRFTKDAINLLEKGEK*
Ga0114355_117685833300008120Freshwater, PlanktonDSDDKLSIMAEIYTFTPKQKSTEENAELNRLRSKLLELHEIRDALNKEIRFTKDAINLLEKGEK*
Ga0114840_102708143300008258Freshwater, PlanktonMAEIYTFTPKQKSTEESVELNRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGEK*
Ga0114880_101418833300008450Freshwater LakeLTKIDSDDKLSIMAEIYTFTPKQKPTDENVELNRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGEK*
Ga0129333_1013614263300010354Freshwater To Marine Saline GradientMAEIYTFTPKQKSKPDNTELERLRAKLLELHEVRDTLNKEIRFTKDAINLLEKGEK*
Ga0129333_1037831133300010354Freshwater To Marine Saline GradientTFTPKQKSKPDNTELNRLRARLLELHEVRDTLNKEIRFTKDAINLLEKGEK*
Ga0129333_1045300743300010354Freshwater To Marine Saline GradientMAEIYTFTPKQKPTNDNVELNRLRARLLDLYEIRDTLNKEIRYTKDAIKLLEKGEK*
Ga0129333_1072432713300010354Freshwater To Marine Saline GradientMAEIYTFTPKTKPQRCIELDRLRAKLLELHEARDALNREIRYTKDAITLLEKGEK*
Ga0129333_1076237343300010354Freshwater To Marine Saline GradientMAEIYTFTPKQKPKEGNNNELSRLRAKLLELHEVRDALNKEIRYTKDAINLLEKGEK*
Ga0129333_1079661723300010354Freshwater To Marine Saline GradientMAEIYTFVPKKKPQVDNTELDRLRAKLLEIHEARDALNKEIRYIKDAINLLEKGEK*
Ga0129333_1162281713300010354Freshwater To Marine Saline GradientMADIYTFTPKSIPKQTIELDRLKSKLMELHEARDALNKEIRYTKDAITLLEKGEK*
Ga0151517_1022343300011113FreshwaterMAEIYTFTPKQKSKSDNTELERLRAKLLELHEVRDTLNKEIRFTKDAINLLEKGEK*
Ga0151517_166553300011113FreshwaterMAEIYTFTPKQKSTNDNVELNRLRARLLDLYEIRDTLNKEIRYTKDAIKLLEKGEK*
Ga0153805_105231123300012013Surface IceMAEIYTFTPKTKPQSVDELDRLRAKLLELHEARDALNKEIRYTKDAITLLEKGEK*
Ga0153801_104643423300012017FreshwaterMAEIYTFTPKTKPQSVDELDRLRAKLLELHEARDALNKEIRYTKDAIILLEKGEK*
Ga0164292_1034778523300013005FreshwaterMAEIYTFTPKTKPQSVIELDRLRAKLLELHEARDALNREIRYTKDAITLLEKGEK*
(restricted) Ga0172367_1010203433300013126FreshwaterMAEIYTFIPKQKHQAETSLELNRLRAKLLELHEVRDTLNKEIRYTKDAITLLEKGEK*
Ga0181343_100046883300017766Freshwater LakeMAEIYTFTPKQNPKIENSIELDRLKVKLLELYEVRDTLNKEIRYTKDAITLLEKGEK
Ga0169931_10048178133300017788FreshwaterMAEIFTFTPKKKSSSEDNNELNRLKAKLLELYEVCDSLNKEIRYTKDAIILLEKGEN
Ga0194113_1074290613300020074Freshwater LakeTFTPKQKSTENNVELNRLRAKLLELYEVRDTLNKEIRYTKDAIKLLEKGEK
Ga0194110_1027668323300020084Freshwater LakeMAEIYTFTPKQKSTENNVELNRLRAKLLELYEVRDTLNKEIRYTKDAINLLEKGEK
Ga0211729_1035509133300020172FreshwaterMAEIYTFTPKQKPKIENSIELDRLKAKLLELYEVRDTLNKEIRYTKDAITLLEKGEK
Ga0194115_10012174123300020183Freshwater LakeMAEIYTFVPKQKPKEKNNDELSRLRAKLLELYEVRDTLNKEIRYTKDAINLLEKGEK
Ga0194115_1009079733300020183Freshwater LakeMAEIYTFTPKQKHPAETSLELDRLRAKLLELHEVRDTLNKEIRYTKDAITLLEKGEK
Ga0194115_1016937923300020183Freshwater LakeMAEIYTFTPKQKSTSESVELNRLRAKLLELYEVRDALNKEIRYTKDAINLLEKGEK
Ga0194115_1030168723300020183Freshwater LakeMAEIYTFVPKQKPQVDNTELDRLRAKLLEMHESRDAINREIRFIKDAINLLEKGEK
Ga0194115_1035946923300020183Freshwater LakeMAEIYTFTPKQKTTDDNVELNRLRAKLLELHEVRDTLNKEIRYTKDAINLLEKGEK
Ga0194118_10020491143300020190Freshwater LakeMAEIYTFTPKQKSTENNVELNRLRAKLLELYEVRDTLNKEIRYTKDAINLLGKGEK
Ga0194124_1031853213300020196Freshwater LakeLLNMAEIYTFTPKQKFTKNNVELNRLRAKLLELHEVRDTLNKEIRYTKDAIKLLEKGEK
Ga0208364_102304933300020533FreshwaterMAEIYTFTPKQKSVDENAEINRLRAKLLELHEIRDTLNKEIRFTKDAINLLEKGEK
Ga0194126_1015824543300020603Freshwater LakeMAEIYTFTPKQKSTENNVELNRLRAKLLELYEVRDTLNKEIRYTKDAIKLLEKGEK
Ga0194117_1007774943300021424Freshwater LakeMAEIYTFTPKQKFTKNNVELNRLRAKLLELHEVRDTLNKEIRYTKDAIKLLEKGEK
Ga0222716_1058730923300021959Estuarine WaterMAEIYTFTPKQKPTNDNVELNRLRARLLDLYEIRDTLNKEIRYTKDAIKLLEKGEK
Ga0222714_1029309233300021961Estuarine WaterMAEIYTFTPKQKPQERNTIELDRLRVKLLELHEVRDTLNKEIRYTKDAITLLEKGEK
Ga0222713_1019322033300021962Estuarine WaterMAEIYTFTPKQKPQEKNNVELDRLRAKLLELYEVRDTLNKEIRYTKDAITLLEKGEK
Ga0181353_100588033300022179Freshwater LakeMADIYTFTPKYKPEKSIELDRLRAKLMELHEARDALNKEIRYTKDAITLLEKGEK
Ga0181353_101552733300022179Freshwater LakeMAEIYTFTPKQKPKIENSIELDRLRAKLLELHEVRDTLNKEIRYTKDAITLLEKGEK
Ga0214917_1012305833300022752FreshwaterMAEIYTFTPKQKSTNDNVELNRLRARLLDLYEIRDTLNKEIRYTKDAIKLLEKGEK
Ga0255143_107698623300024500FreshwaterMAEIYTFIPKQKPQVDNTELDRLRAKLLEIHEARDALNREIRFIKDAINLLEKGEK
Ga0208974_1005176103300027608Freshwater LenticMAEIYTFTPKTKPQRFIELDRLRAKLLELHEARDALNKEIRYTKDAITLLEKGEK
Ga0209972_10017196113300027793Freshwater LakeMAEIYTFTPKQKNSEETVELNRLRAKLLELHEVRDTLNKEIRYTKDAINLLEKGEK
Ga0209972_1021261513300027793Freshwater LakeMAEIYTFTPKKKSTDENEELNRLRAKLLELHEIRDALNKEIRYTKDAIKLLEKGEK
Ga0209972_1030741233300027793Freshwater LakeMAEIYTFTPKQKPTDENVELNRLRAKLLELHEIRDTLNKEIRYTKDAIKLLEKGEK
Ga0209990_1011766533300027816Freshwater LakeMAEIYTFTPKQKSTEENAELNRLRAKLLELHEVRDALNKEIRFTKDAINLLEKGEK
Ga0209990_1020496623300027816Freshwater LakeMAEIYTFTPKQKSCEEDVELNRLRAKLLELHDVRDTINKEIRFTKDAINLLEKGEK
Ga0209990_1051990323300027816Freshwater LakeIMAEIYTFTPKQRNTEENVELNRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGEK
Ga0119944_100291223300029930AquaticMAEIYTFTPKQKSTQDNVELNRLRAKLLELHEVRDALNKEIRYTKDAIKLLEKGER
Ga0119944_104358423300029930AquaticMADIYTFTPKQKPKNEDNVELNRLRVKLLELHEVRDALNKEIRYTKDAINLLEKGEK
Ga0315907_10002573163300031758FreshwaterLTKIDSDDKLSIMAEIYTFTPKKKSTDENEELNRLRAKLLELHEIRDALNKEIRYTKDAIKLLEKGEK
Ga0315907_1013660463300031758FreshwaterMAEIYTFTPKQRNTEENVELNRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGEK
Ga0315907_1020596033300031758FreshwaterMAEIYTFTPKQKSKEESVELNRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGEK
Ga0315907_1042404433300031758FreshwaterMAEIYTFTPKQKSTEENAELNRLRSKLLELHEIRDALNKEIRFTKDAINLLEKGEK
Ga0315907_1084013433300031758FreshwaterFTPKQKSKPDNTELERLRAKLLELHEVRDTLNKEIRFTKDAINLLEKGEK
Ga0315907_1107910823300031758FreshwaterMAEIYTFTPKTKPQRCIELDRLRAKLLELHEARDALNKEIRYTKDAITLLEKGEK
Ga0315907_1123444023300031758FreshwaterMAEIYTFTPKQKSKPDNTELDRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGEK
Ga0315900_1054418223300031787FreshwaterMAEIYTFTPKQKSNDEDVELDRLRAKLLELHEVRDALNKEIRFTKDAINLLEKGEK
Ga0315909_10008913293300031857FreshwaterMAEIYTFIPKQKCKVDNTELDRLRAKLLELHNARDVINKEIRYTKDAIKLLEKGEK
Ga0315909_1016536633300031857FreshwaterMAEIYTFVPKQKPQVDNTELDRLRAKLLEIHEARDALNREIRFIKDAINLLEKGEK
Ga0315904_1007764693300031951FreshwaterMADIYNFTPRPKREQNDNTELDRLRAKLLELHDARETIIKEIRYTKDAIKLLEKGEQ
Ga0315904_1022537563300031951FreshwaterMAEIYTFIPKQKPQVDNTELDRLRAKLLEIHEARDALNREIRFIKDAINLLEKGEQ
Ga0315904_1045260523300031951FreshwaterMAEIYTFTPKTKPQRCIELDRLRAKLLELHEARDALNREIRYTKDAITLLEKGEK
Ga0315904_1102444323300031951FreshwaterMAEIYTFTPKQKSKPDNTELERLRAKLLELHEVRDTLNKEIRFTKDAINLLEKGEK
Ga0315901_1045541953300031963FreshwaterMAEIYTFTPKQKSKPDNTELDRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGE
Ga0315901_1102773023300031963FreshwaterMAEIYTFTPKQKSNDEDVELDRLRAKLLELHDIRDTLNKEIRFTKDAINLLEKGEK
Ga0315906_1005075653300032050FreshwaterMAEIYTFIPKQKCKVDNTELDRLRAKLLELHNARDVINKEIRYTKDAINLLEKGEK
Ga0315906_1072915333300032050FreshwaterLTTIDSDDKLSIMAEIYTFTPKQKSTEENAELNRLRSKLLELHEIRDALNKEIRFTKDAINLLEKGEK
Ga0315902_1081196933300032093FreshwaterLTKINGSDKLSIMAEIYTFTPKQKSKEESVELNRLRAKLLELHEIRDTLNKEIRYTKDAINLLEKGEK
Ga0315903_1086421413300032116FreshwaterMAEIYTFIPKQKPQVDNTELDRLRAKLLEIHEARDALNREIRFIKDA
Ga0334996_0000277_20338_205053300033994FreshwaterMADIYTFTPKNKPETFYELDRLRAKLMELYESRDALNKEIRYTKDAITLLEGGEK
Ga0335029_0211425_835_10083300034102FreshwaterMAEIYTFTPKQKPKEGNNNELSRLRAKLLELHEVRDALNKEIRYTKDAINLLEKGEK
Ga0335036_0003620_4873_50433300034106FreshwaterMAEIYTFTPKQKSKSDNTELERLRAKLLELHEVRDTLNKEIRFTKDAINLLEKGEK
Ga0335036_0039687_2880_30863300034106FreshwaterLTKNNGNDKLSIMAEIYTFTPKQKPTDENVELNRLRAKLLELHEIRDTLNKEIRYTKDAIKLLEKGEK
Ga0335036_0541845_463_6693300034106FreshwaterLTRIDSDDKLSIMAEIYTFTPKQRNTEENVELNRLRAKLLELHEIRDTLNKEIRYTKDAIKLLEKGEK
Ga0335036_0603534_2_1723300034106FreshwaterMAEIYTFTPKKKSTDENEELNRLRAKLLELHEIRDALNKEIRFTKDAINLLEKGEK
Ga0335068_0446769_1_1533300034116FreshwaterMAEIYTFTPKTKPQRCIELDRLRAKLLELHEARDALNREIRYTKDAITLLE


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