Metagenome / Metatranscriptome Family F091354

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091354
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	62 residues
Representative Sequence	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Number of Associated Samples	73
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.44 %
% of genes near scaffold ends (potentially truncated)	26.17 %
% of genes from short scaffolds (< 2000 bps)	85.05 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.140 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (20.561 % of family members)
Environment Ontology (ENVO)	Unclassified (63.551 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.766 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.68% β-sheet: 1.61% Coil/Unstructured: 38.71%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01161	PBP	3.74
PF13844	Glyco_transf_41	3.74
PF05762	VWA_CoxE	3.74
PF13432	TPR_16	2.80
PF08897	DUF1841	1.87
PF13437	HlyD_3	1.87
PF13181	TPR_8	1.87
PF00589	Phage_integrase	1.87
PF00535	Glycos_transf_2	1.87
PF01230	HIT	0.93
PF01527	HTH_Tnp_1	0.93
PF13505	OMP_b-brl	0.93
PF13098	Thioredoxin_2	0.93
PF01650	Peptidase_C13	0.93
PF04519	Bactofilin	0.93
PF03175	DNA_pol_B_2	0.93
PF13649	Methyltransf_25	0.93
PF13683	rve_3	0.93
PF13640	2OG-FeII_Oxy_3	0.93
PF01075	Glyco_transf_9	0.93
PF00656	Peptidase_C14	0.93
PF00970	FAD_binding_6	0.93
PF07460	NUMOD3	0.93
PF05598	DUF772	0.93
PF13661	2OG-FeII_Oxy_4	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	3.74
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.93
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.93
COG5206	Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8	Posttranslational modification, protein turnover, chaperones [O]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
All Organisms	root	All Organisms	44.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
cellular organisms	root	All Organisms → cellular organisms	42.99 %
Viruses	superkingdom	All Organisms → Viruses	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	27.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	22.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.93 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.93 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.93 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	17.76 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
beta proteobacterium CB	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium CB	0.93 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Limnohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	10.28 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
Candidatus Methylopumilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus	0.93 %
unclassified Xanthomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
beta proteobacterium CB	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium CB	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
unclassified Limnohabitans	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans	8.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
Polynucleobacter corsicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter corsicus	0.93 %
Xanthomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	0.93 %
Candidatus Methylopumilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
beta proteobacterium CB	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium CB	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Limnohabitans sp. JirII-31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. JirII-31	4.67 %
Limnohabitans sp. 103DPR2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 103DPR2	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
Limnohabitans sp. Jir61	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Jir61	0.93 %
Limnohabitans sp. 2KL-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 2KL-17	0.93 %
Polynucleobacter corsicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter corsicus	0.93 %
Xanthomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	0.93 %
Candidatus Methylopumilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
beta proteobacterium CB	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium CB	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004240\|Ga0007787_10017006	Not Available	3008	Open in IMG/M
3300004794\|Ga0007751_11487039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 2KL-17	1615	Open in IMG/M
3300005581\|Ga0049081_10120697	Not Available	970	Open in IMG/M
3300005581\|Ga0049081_10312355	Not Available	539	Open in IMG/M
3300005585\|Ga0049084_10243336	Not Available	606	Open in IMG/M
3300007590\|Ga0102917_1334134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	522	Open in IMG/M
3300007603\|Ga0102921_1208087	Not Available	703	Open in IMG/M
3300007972\|Ga0105745_1041932	All Organisms → Viruses → Predicted Viral	1232	Open in IMG/M
3300008055\|Ga0108970_10514064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1807	Open in IMG/M
3300008108\|Ga0114341_10147796	All Organisms → cellular organisms → Bacteria → Proteobacteria	1369	Open in IMG/M
3300008119\|Ga0114354_1270777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. JirII-31	531	Open in IMG/M
3300008261\|Ga0114336_1139158	Not Available	1089	Open in IMG/M
3300008261\|Ga0114336_1270441	Not Available	663	Open in IMG/M
3300009051\|Ga0102864_1154123	Not Available	628	Open in IMG/M
3300009068\|Ga0114973_10576626	Not Available	578	Open in IMG/M
3300009151\|Ga0114962_10202894	Not Available	1157	Open in IMG/M
3300009154\|Ga0114963_10029711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3603	Open in IMG/M
3300009154\|Ga0114963_10584489	Not Available	587	Open in IMG/M
3300009155\|Ga0114968_10197308	All Organisms → cellular organisms → Bacteria → Proteobacteria	1168	Open in IMG/M
3300009155\|Ga0114968_10323072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	857	Open in IMG/M
3300009158\|Ga0114977_10231529	Not Available	1073	Open in IMG/M
3300009161\|Ga0114966_10289469	Not Available	995	Open in IMG/M
3300009181\|Ga0114969_10544921	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300009185\|Ga0114971_10625127	Not Available	594	Open in IMG/M
3300009185\|Ga0114971_10704880	Not Available	551	Open in IMG/M
3300009187\|Ga0114972_10580988	Not Available	627	Open in IMG/M
3300009684\|Ga0114958_10049914	All Organisms → cellular organisms → Bacteria → Proteobacteria	2253	Open in IMG/M
3300010158\|Ga0114960_10468844	Not Available	608	Open in IMG/M
3300010334\|Ga0136644_10358484	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
3300010885\|Ga0133913_10407754	All Organisms → cellular organisms → Bacteria	3592	Open in IMG/M
3300012666\|Ga0157498_1060399	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300012771\|Ga0138270_1263979	Not Available	517	Open in IMG/M
3300013005\|Ga0164292_10319794	All Organisms → Viruses → Predicted Viral	1056	Open in IMG/M
3300013006\|Ga0164294_10023501	All Organisms → cellular organisms → Bacteria → Proteobacteria	4998	Open in IMG/M
3300013006\|Ga0164294_10102323	Not Available	2122	Open in IMG/M
3300013006\|Ga0164294_10173268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1545	Open in IMG/M
3300013006\|Ga0164294_10398051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 103DPR2	944	Open in IMG/M
3300013014\|Ga0164295_10952326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. JirII-31	666	Open in IMG/M
3300013014\|Ga0164295_10973755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus	658	Open in IMG/M
3300013285\|Ga0136642_1027176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1644	Open in IMG/M
3300013295\|Ga0170791_13557062	Not Available	1230	Open in IMG/M
3300018868\|Ga0187844_10121148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1165	Open in IMG/M
3300018868\|Ga0187844_10126321	Not Available	1136	Open in IMG/M
3300018868\|Ga0187844_10172468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. JirII-31	940	Open in IMG/M
3300019093\|Ga0187843_10345837	Not Available	604	Open in IMG/M
3300020161\|Ga0211726_10636220	Not Available	501	Open in IMG/M
3300020172\|Ga0211729_10318481	Not Available	883	Open in IMG/M
3300020172\|Ga0211729_10897401	Not Available	1518	Open in IMG/M
3300021354\|Ga0194047_10260749	Not Available	671	Open in IMG/M
3300022752\|Ga0214917_10015364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6652	Open in IMG/M
3300022752\|Ga0214917_10072380	Not Available	2158	Open in IMG/M
3300023184\|Ga0214919_10026699	All Organisms → cellular organisms → Bacteria	6180	Open in IMG/M
3300023184\|Ga0214919_10093916	All Organisms → cellular organisms → Bacteria	2587	Open in IMG/M
3300023184\|Ga0214919_10257381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1244	Open in IMG/M
3300023184\|Ga0214919_10516242	Not Available	731	Open in IMG/M
3300024280\|Ga0255209_1029920	Not Available	851	Open in IMG/M
3300024311\|Ga0255211_1050007	Not Available	720	Open in IMG/M
3300024485\|Ga0256318_1019879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1380	Open in IMG/M
3300024862\|Ga0256317_1032682	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300024862\|Ga0256317_1121045	Not Available	573	Open in IMG/M
3300027129\|Ga0255067_1067088	Not Available	511	Open in IMG/M
3300027133\|Ga0255070_1021832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1058	Open in IMG/M
3300027135\|Ga0255073_1074456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 103DPR2	540	Open in IMG/M
3300027149\|Ga0255108_1100253	Not Available	503	Open in IMG/M
3300027329\|Ga0255109_1074146	Not Available	726	Open in IMG/M
3300027508\|Ga0255072_1057115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	795	Open in IMG/M
3300027598\|Ga0255121_1100271	Not Available	530	Open in IMG/M
3300027697\|Ga0209033_1185197	Not Available	630	Open in IMG/M
3300027708\|Ga0209188_1107146	Not Available	1112	Open in IMG/M
3300027732\|Ga0209442_1128188	Not Available	997	Open in IMG/M
3300027744\|Ga0209355_1208050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter corsicus	795	Open in IMG/M
3300027744\|Ga0209355_1220897	Not Available	762	Open in IMG/M
3300027747\|Ga0209189_1009534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	5722	Open in IMG/M
3300027756\|Ga0209444_10189066	Not Available	756	Open in IMG/M
3300027760\|Ga0209598_10081013	Not Available	1572	Open in IMG/M
3300027772\|Ga0209768_10015152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	4381	Open in IMG/M
3300027772\|Ga0209768_10123747	Not Available	1241	Open in IMG/M
3300027772\|Ga0209768_10274903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Jir61	719	Open in IMG/M
3300027772\|Ga0209768_10425683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. JirII-31	521	Open in IMG/M
3300027777\|Ga0209829_10006041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	8165	Open in IMG/M
3300027785\|Ga0209246_10226717	Not Available	726	Open in IMG/M
3300027804\|Ga0209358_10116626	Not Available	1463	Open in IMG/M
3300027892\|Ga0209550_10715764	Not Available	573	Open in IMG/M
3300028271\|Ga0255256_1076928	Not Available	583	Open in IMG/M
3300028394\|Ga0304730_1318403	Not Available	529	Open in IMG/M
3300031758\|Ga0315907_10382680	Not Available	1138	Open in IMG/M
3300031784\|Ga0315899_10343025	All Organisms → cellular organisms → Bacteria → Proteobacteria	1467	Open in IMG/M
3300031784\|Ga0315899_11258370	Not Available	637	Open in IMG/M
3300031784\|Ga0315899_11428161	Not Available	584	Open in IMG/M
3300031786\|Ga0315908_10654786	Not Available	869	Open in IMG/M
3300032050\|Ga0315906_10523223	Not Available	997	Open in IMG/M
3300032092\|Ga0315905_10002030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	21411	Open in IMG/M
3300032092\|Ga0315905_10165160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2198	Open in IMG/M
3300032092\|Ga0315905_10185404	Not Available	2057	Open in IMG/M
3300032092\|Ga0315905_10284039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium CB	1594	Open in IMG/M
3300032092\|Ga0315905_10396729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. JirII-31	1297	Open in IMG/M
3300032092\|Ga0315905_10420553	Not Available	1250	Open in IMG/M
3300032092\|Ga0315905_10453121	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300032092\|Ga0315905_10513312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1101	Open in IMG/M
3300032092\|Ga0315905_10529322	Not Available	1080	Open in IMG/M
3300032092\|Ga0315905_10553919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	1048	Open in IMG/M
3300032092\|Ga0315905_10772720	Not Available	840	Open in IMG/M
3300032092\|Ga0315905_10780931	Not Available	834	Open in IMG/M
3300034023\|Ga0335021_0157254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	1290	Open in IMG/M
3300034096\|Ga0335025_0456166	Not Available	651	Open in IMG/M
3300034121\|Ga0335058_0630081	Not Available	597	Open in IMG/M
3300034167\|Ga0335017_0235487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1040	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.07%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	95.33%
Marine	Environmental → Aquatic → Marine	3.74%
Leaf	Host-Associated → Plants → Leaf	0.93%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	50.47%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	16.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	15.89%
River	Environmental → Aquatic → Freshwater → River	12.15%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.80%
Coastal	Environmental → Aquatic → Marine → Coastal	0.93%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	50.47%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	16.82%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	15.89%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	12.15%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	20.56%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	16.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	15.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	13.08%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	12.15%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.41%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.74%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.80%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.80%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.93%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.93%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.93%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004794	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012666	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2	Environmental	Open in IMG/M
3300012771	Freshwater microbial communities from Lake Croche, Canada - C_130625_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300018868	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50	Environmental	Open in IMG/M
3300019093	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024280	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepC_8d	Environmental	Open in IMG/M
3300024311	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepB_8d	Environmental	Open in IMG/M
3300024485	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024862	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027129	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8h	Environmental	Open in IMG/M
3300027133	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepB_8h	Environmental	Open in IMG/M
3300027135	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepB_8h	Environmental	Open in IMG/M
3300027149	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepA_8h	Environmental	Open in IMG/M
3300027329	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8h	Environmental	Open in IMG/M
3300027508	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027598	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepB_8h	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300028271	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0007787_100170065	3300004240	Freshwater Lake	MQQQDDFNIWLEECRNYGLRVTRDRLIKSLHEFDDFAYQFAMSADSKTMIVLLEREVFNDDV*
Ga0007751_114870392	3300004794	Freshwater Lake	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0049081_101206971	3300005581	Freshwater Lentic	MQQQEDFNIWLEECRNYGLRVTRDRLIKSLEEFNHDFYQFAMSPDSKTMIVLLEREVFNDDI*
Ga0049081_103123551	3300005581	Freshwater Lentic	MQQQENFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0049084_102433361	3300005585	Freshwater Lentic	MQQEDDFNFWLEECRNYGLRVTRERLIKSLNEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0102917_13341341	3300007590	Estuarine	MQQEDDFNFWIDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDAKTMIVLLEREVFNDDV*
Ga0102921_12080871	3300007603	Estuarine	MQQEDDFNFWLDERRNYGLRVTRDRLIKSLYEFDDYAYQFAMSPDSKTMIVLLEREVFNDDI*
Ga0105745_10419321	3300007972	Estuary Water	MQQQDDFNFWLDECRNYGLRVTRDRLIQSLHEFDDFAYQFAMSPDSKTMIVLIESEKECEDDDV*
Ga0108970_105140642	3300008055	Estuary	MQQQDDFNFWLDECRNYGLRVTRDRLIQSLHEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0114341_101477961	3300008108	Freshwater, Plankton	MQQEDDFNFWLAECRNYGLTVTKERLMRSLSEFNHKSYQFAMSPDAQTMIVLIESDKECEDDDV*
Ga0114354_12707771	3300008119	Freshwater, Plankton	MQQEDDFNFWLDECRNYGLRVTRDRMIKSLYEFDDFTYQFAMSPDSKTMIVLIEREVFNDDV*
Ga0114336_11391583	3300008261	Freshwater, Plankton	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFVMSPDSKTMIVLLEREVFNDHI*
Ga0114336_12704411	3300008261	Freshwater, Plankton	MQQDFSFYYWLAECRNYGLTVTKDRLIKSINEFNHNSYQFAMSPDAKTMIVLIESDKECEDDDV*
Ga0102864_11541231	3300009051	Estuarine	KWLGDLLNTFFKGVTMQQQDDFNFWLDECRNYGLRVTRERLIKSLHEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0114973_105766262	3300009068	Freshwater Lake	MQQEDFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSLDSKTLIILLEREVFNDDV*
Ga0114962_102028941	3300009151	Freshwater Lake	EVPMQQEDDFNFWLDECRNYGLRVTKDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0114963_100297113	3300009154	Freshwater Lake	MQQEDNFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDAKTMIVLIESDKECEHDDV*
Ga0114963_105844891	3300009154	Freshwater Lake	QEDFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSLDSKTLIILLEREVFNDDV*
Ga0114968_101973082	3300009155	Freshwater Lake	MLQEDDFNFWLEECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0114968_103230723	3300009155	Freshwater Lake	MQQEDFNIWLDECRNYGLRVTRDRLIKSLHELDDFAYQFAMSPDSKTMIVLLEMEVFNDDV*
Ga0114977_102315291	3300009158	Freshwater Lake	MQQQDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSLDSKTLIILLEREVFNDDV*
Ga0114966_102894691	3300009161	Freshwater Lake	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVL
Ga0114969_105449212	3300009181	Freshwater Lake	ECRNYGLRVTRDRLIQSLHEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0114971_106251271	3300009185	Freshwater Lake	MQQQEDFNLWLEECRNYGLRVTRERLIKSLEEFNHDSYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0114971_107048801	3300009185	Freshwater Lake	MQQEDDFNFWLDECRNYGLRVTKDRLIKSLYEFDDFAYQFAMSLDSKTMIDLLEREVFNDDV*
Ga0114972_105809881	3300009187	Freshwater Lake	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLL
Ga0114958_100499144	3300009684	Freshwater Lake	MQQEDFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSLDSKKLIILLEREVFNDDV*
Ga0114960_104688442	3300010158	Freshwater Lake	MQQEDDFNFWLDECRNYGLRVTKDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0136644_103584844	3300010334	Freshwater Lake	MQQEDFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0133913_104077544	3300010885	Freshwater Lake	MQQEDGFNLWLDECRNYGLSVTRERLITSLYEFDDYAYKFAMSPDAKTMIVLLEKGVPNDDI*
Ga0157498_10603991	3300012666	Freshwater, Surface Ice	MQQQDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFTYQFAISPDSKTMIVL
Ga0138270_12639791	3300012771	Freshwater Lake	MQQEDFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTLIILLEREVFNDDV*
Ga0164292_103197942	3300013005	Freshwater	MQQEDDFNFWLEECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLERGVLNDDV*
Ga0164294_100235012	3300013006	Freshwater	MQQEEDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDTKTMIVLLEREVLNDDV*
Ga0164294_101023233	3300013006	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYLFAMSPDSKTMIVLLEREVFNDDV*
Ga0164294_101732682	3300013006	Freshwater	MQQDFNFYYWLAECRNYGLTVTKERLIKSLNEFNHNCYQFAMSPDAKTMVVLIESDRECEDDDV*
Ga0164294_103980511	3300013006	Freshwater	LNTFIWEVPMQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0164295_109523262	3300013014	Freshwater	MLNTFIWEVPMQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVLNDDV*
Ga0164295_109737552	3300013014	Freshwater	MQQEDNFNFWLDECRNYGLRVNRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0136642_10271764	3300013285	Freshwater	MQQDDFNIWLEECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV*
Ga0170791_135570621	3300013295	Freshwater	EVPMQQEDDFNFWLDECRNYGLRVTKDRLIKSLYEFDDFAYQFAMSLDSKKLIILLEREVFNDDV*
Ga0187844_101211481	3300018868	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFTYQFAISPDSKTMIVLLE
Ga0187844_101263212	3300018868	Freshwater	MQYQEDFNIWLDECRNYGLRVTRDRLIKSLNEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0187844_101724682	3300018868	Freshwater	MQHEDDFIFWLDECRNYGLRVTRDRMIKSLYEFDDFTYQFAMSPDSKTMIVLIEREVFNDDV
Ga0187843_103458371	3300019093	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQLAMSPDSKTMIVLLEREVFNDDV
Ga0211726_106362201	3300020161	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0211729_103184812	3300020172	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYHFAKSPDSKTMIVLLEREVFNDDV
Ga0211729_108974012	3300020172	Freshwater	MQQDFKFYYWLAECCNYGLTVTKERLIKSINEFNHNSYQFAMSPDAKTTVVLIESDKECEDDDV
Ga0194047_102607493	3300021354	Anoxic Zone Freshwater	MQQEDFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDD
Ga0214917_100153643	3300022752	Freshwater	MLQEDDFYFWLAECRNYGLRVTRDRLIKSLNEFNHNSYQFAMSPDAKTMIVLIKSDKECEDDDV
Ga0214917_100723802	3300022752	Freshwater	MQQEDDFIFWLDECRNYGLRVTRERLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0214919_100266992	3300023184	Freshwater	MQQQDDFNFWLEECRNYGLRVTRDRLIKSLHEFDDFAYQFAMSPDSKTMIVLLEREIFNDDI
Ga0214919_100939162	3300023184	Freshwater	MQQEDFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSLDSKTLIILLEREVFNDD
Ga0214919_102573813	3300023184	Freshwater	MQQEDDFNFWLEECRNYGLRVTRDRLIKSLHEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0214919_105162421	3300023184	Freshwater	MQQQYDFNFWLEECRNYGLRVTRYRLIKSLEEFNQDFYQFAMSPDSKTMIVLLEREVFNDDV
Ga0255209_10299202	3300024280	Freshwater	MQQEDDFNFWLDECRDYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0255211_10500072	3300024311	Freshwater	MQQEDDFNFWLDECRDYGLRVTRDRLIKSLNEFNHNSYQFAMSPDSKTMIV
Ga0256318_10198793	3300024485	Freshwater	MQQEDDFIFWLDEFRNYGLTVTKARLIKSLNEFNHNSYQFAMSPDAKTMVVLIESDKECEDDDV
Ga0256317_10326823	3300024862	Freshwater	MQQEDDFNFWLAECRNYGLTVTKDRLIKSINEFNHNSYQFAMSPDSKTMIVLLERELFNDDV
Ga0256317_11210452	3300024862	Freshwater	MQQQDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0255067_10670881	3300027129	Freshwater	MQQQDDFNFWLDECRNYGLRVTRDRLIQSLHEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0255070_10218321	3300027133	Freshwater	TFFKGVTMQQQDDFNFWLDECRNYGLRVTRDRLIQSLHEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0255073_10744562	3300027135	Freshwater	FKGVTMQQQDDFNFWLDECRNYGLRVTRDRLIQSLHEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0255108_11002532	3300027149	Freshwater	MQQNDDFNFWLAECRNYGLKVTRERLMKSLCEFDDFAYQFAMSPDSKTMIVLLEREVINDESC
Ga0255109_10741461	3300027329	Freshwater	MKQEDDFNFWLDECRNYGLRVTRYRLIKSLYEFDDFAYQFAMSPDAKTMIVLLEKEVFNDDV
Ga0255072_10571153	3300027508	Freshwater	LGDLLNTFFKGVTMQQQDDFNFWLDECRNYGLRVTRDRLIQSLHEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0255121_11002711	3300027598	Freshwater	AKYFHLGGVNAAGFKFYYWLLEYRNYGLTVTKKRLIKSLEEFNHNCYQFVISPDSQTMVVLIESDKGCEVDDI
Ga0209033_11851971	3300027697	Freshwater Lake	MQQQDDFNIWLEECRNYGLRVTRDRLIKSLHEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0209188_11071462	3300027708	Freshwater Lake	MQQEDNFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDAKTMIVLIESDKECEHDDV
Ga0209442_11281883	3300027732	Freshwater Lake	MQQDFNFYYWLAECRNYGLTVTKDRLIKSINEFNHNSYQFAMSPDSKTMVVLIESDKECEDDDV
Ga0209355_12080501	3300027744	Freshwater Lake	MQQQDDFNFWLDECRNYGLRVTRDRLIQSLHEFDDFAYQFAMSPDSKTMIV
Ga0209355_12208971	3300027744	Freshwater Lake	DFNFWIDECRNNGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTVIVLLEREVFNDDV
Ga0209189_10095341	3300027747	Freshwater Lake	QQEDFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTLIILLEREVFNDDV
Ga0209444_101890662	3300027756	Freshwater Lake	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFTYQFAISPDSKTMIVLLESEVFNDDI
Ga0209598_100810133	3300027760	Freshwater Lake	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTLIILLEREVFNDDV
Ga0209768_100151523	3300027772	Freshwater Lake	MQQQEDFNIWLDECRNYGLRVTRDRLIKSLHEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0209768_101237473	3300027772	Freshwater Lake	MQQDFNFYYWLAECRNYGLTVTKDRLIKSLNEFNHNSYQFAMSPDAKTMVVLIESDKECEDDDV
Ga0209768_102749031	3300027772	Freshwater Lake	MEQQNNFIIWLSDCRNYGLTVTKERLIKSLNTFDHDSYQFAMSPDAKTMIVLIESDKECENDDI
Ga0209768_104256832	3300027772	Freshwater Lake	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFTYQFAISPDSKTMIV
Ga0209829_100060414	3300027777	Freshwater Lake	MQQEDFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTLIILLEREVFNDD
Ga0209246_102267172	3300027785	Freshwater Lake	MQQEDDFNFWLEECRNYGLRVTRDRLIKSLYEFNDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0209358_101166263	3300027804	Freshwater Lake	MQQQDDFNIWLEECRNYGLRVTRDRLIKSLHEFDDFAYQFAMSADSKTMIVLLEREVFNDDV
Ga0209550_107157641	3300027892	Freshwater Lake	MQQEDDFIFWLDECRNYGLTVTKERLIKSINEFNHNSYQFAMSPDSKTMVVLIESDKECEDDDI
Ga0255256_10769283	3300028271	Freshwater	MQQDFNFYYWLAECSNYGLTVTKDRLIKSINEFNHNSYQFAMSPDAKTMVVLIESNKECEDDDV
Ga0304730_13184032	3300028394	Freshwater Lake	MQQEDFNIWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSLDSKTLIILLER
Ga0315907_103826803	3300031758	Freshwater	MQQDFNFYYWLAECRNYGLTVTKERLIKSINEFNHNSYQFAMSPDAQTMVVLIESDKECEDDDI
Ga0315899_103430251	3300031784	Freshwater	MQQEDDFNFWLAECRNYGLTVTKERLMRSLSEFNHKSYQFAMSPDAQTMIVLIESDK
Ga0315899_112583701	3300031784	Freshwater	FWLNECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0315899_114281611	3300031784	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLNEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0315908_106547862	3300031786	Freshwater	MQQENDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0315906_105232231	3300032050	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDEFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0315905_100020302	3300032092	Freshwater	MQQQDDFNYWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0315905_101651605	3300032092	Freshwater	MQQEDDFIFWLDEFRNYGLTVTKERLIKSINEFNHNSYQFAMSPDAKTMVVLIESHKECEDDDV
Ga0315905_101854042	3300032092	Freshwater	MQQEDDFNFWLDECRNYGLRVARDRLIKSLYEFDDFAYRFEMSPDSKTMIVLLEREVHNDDV
Ga0315905_102840392	3300032092	Freshwater	MQQLDDFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0315905_103967291	3300032092	Freshwater	MLNTFIWEVPMQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0315905_104205531	3300032092	Freshwater	LIKINTIIWKVLMQQQDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVLNDDI
Ga0315905_104531213	3300032092	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLER
Ga0315905_105133122	3300032092	Freshwater	MQQEDDFNFYYWLAECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLER
Ga0315905_105293221	3300032092	Freshwater	MQQQDDFNFWLEECRNYGLRVTRGRLIKSLYEFDDFAYQFAMSPDFKTMIVLLEREVFNDDV
Ga0315905_105539192	3300032092	Freshwater	MQQEDDFNFWLDECRNYGLRVSRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV
Ga0315905_107727201	3300032092	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVLNDDV
Ga0315905_107809312	3300032092	Freshwater	MQQDFNFYYWLAECRNYGLTATKERLLKTINEFNHNSYQFAMSPDSKTMIVLLEREVFNDDV
Ga0335021_0157254_548_736	3300034023	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEKEVFNDDV
Ga0335025_0456166_236_430	3300034096	Freshwater	MQQEDDFNFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDAQTMVVLIESEKESEDDDV
Ga0335058_0630081_414_596	3300034121	Freshwater	QQDDSNFWLEECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDGV
Ga0335017_0235487_555_743	3300034167	Freshwater	MQQEDDFIFWLDECRNYGLRVTRDRLIKSLYEFDDFAYQFAMSPDSKTMIVLLEREVFNDDV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091354

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences