NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F091199

Metagenome / Metatranscriptome Family F091199

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091199
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 97 residues
Representative Sequence VSSSFPQQFWRALRNWWREQAREKGAASTTSLLVRKLWSFVRESTPERRRRRYGDMEYDWEHRVNTTSGTVGWRARLLGLFHSPYQPTDPALFQEMMA
Number of Associated Samples 99
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.48 %
% of genes near scaffold ends (potentially truncated) 92.52 %
% of genes from short scaffolds (< 2000 bps) 84.11 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(14.953 % of family members)
Environment Ontology (ENVO) Unclassified
(38.318 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.121 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.79%    β-sheet: 0.00%    Coil/Unstructured: 49.21%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF12679ABC2_membrane_2 10.28
PF07963N_methyl 1.87
PF03572Peptidase_S41 0.93
PF13601HTH_34 0.93
PF05157T2SSE_N 0.93
PF13304AAA_21 0.93
PF01008IF-2B 0.93
PF00482T2SSF 0.93
PF08334T2SSG 0.93
PF03548LolA 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG01825-methylthioribose/5-deoxyribulose 1-phosphate isomerase (methionine salvage pathway), a paralog of eIF-2B alpha subunitAmino acid transport and metabolism [E] 0.93
COG0793C-terminal processing protease CtpA/Prc, contains a PDZ domainPosttranslational modification, protein turnover, chaperones [O] 0.93
COG1184Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta familyTranslation, ribosomal structure and biogenesis [J] 0.93
COG2834Outer membrane lipoprotein-sorting proteinCell wall/membrane/envelope biogenesis [M] 0.93


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001356|JGI12269J14319_10290081All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300004091|Ga0062387_100192022All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1224Open in IMG/M
3300004091|Ga0062387_100480729All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter861Open in IMG/M
3300004152|Ga0062386_100133700All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1926Open in IMG/M
3300005176|Ga0066679_11038186All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter509Open in IMG/M
3300005445|Ga0070708_101345845All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300005921|Ga0070766_10613798All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter731Open in IMG/M
3300006102|Ga0075015_100120052All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1340Open in IMG/M
3300006162|Ga0075030_101289925All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300009518|Ga0116128_1003689All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6064Open in IMG/M
3300009522|Ga0116218_1529380All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300009549|Ga0116137_1044929All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1462Open in IMG/M
3300009549|Ga0116137_1168701All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300009617|Ga0116123_1202199All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300009629|Ga0116119_1069275All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium897Open in IMG/M
3300009629|Ga0116119_1112721All Organisms → cellular organisms → Bacteria → Acidobacteria682Open in IMG/M
3300009640|Ga0116126_1031111All Organisms → cellular organisms → Bacteria → Acidobacteria2239Open in IMG/M
3300009700|Ga0116217_10071286All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2439Open in IMG/M
3300010341|Ga0074045_10742201All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300010341|Ga0074045_10850619All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300010358|Ga0126370_11908427All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300011269|Ga0137392_10480879All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1031Open in IMG/M
3300011270|Ga0137391_10201872All Organisms → cellular organisms → Bacteria1729Open in IMG/M
3300012349|Ga0137387_10379759All Organisms → cellular organisms → Bacteria → Acidobacteria1024Open in IMG/M
3300012356|Ga0137371_10780666All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium729Open in IMG/M
3300012363|Ga0137390_11608716All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300012917|Ga0137395_10548524All Organisms → cellular organisms → Bacteria → Acidobacteria834Open in IMG/M
3300012923|Ga0137359_10842261All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium793Open in IMG/M
3300012927|Ga0137416_11897549All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300012971|Ga0126369_11415657All Organisms → cellular organisms → Bacteria → Acidobacteria785Open in IMG/M
3300014155|Ga0181524_10056040All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2454Open in IMG/M
3300014155|Ga0181524_10369581All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium633Open in IMG/M
3300014156|Ga0181518_10444047All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium621Open in IMG/M
3300014159|Ga0181530_10511650All Organisms → cellular organisms → Bacteria → Acidobacteria597Open in IMG/M
3300014164|Ga0181532_10198388All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1178Open in IMG/M
3300014168|Ga0181534_10741931All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300014489|Ga0182018_10050912All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2533Open in IMG/M
3300014491|Ga0182014_10223074All Organisms → cellular organisms → Bacteria → Acidobacteria1005Open in IMG/M
3300014494|Ga0182017_10171004All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1400Open in IMG/M
3300014498|Ga0182019_10103519All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1745Open in IMG/M
3300014499|Ga0182012_10084720All Organisms → cellular organisms → Bacteria2423Open in IMG/M
3300015193|Ga0167668_1007699All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2428Open in IMG/M
3300015203|Ga0167650_1035563All Organisms → cellular organisms → Bacteria → Acidobacteria1309Open in IMG/M
3300017929|Ga0187849_1005626All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis9862Open in IMG/M
3300017931|Ga0187877_1068485All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1553Open in IMG/M
3300017935|Ga0187848_10186680All Organisms → cellular organisms → Bacteria → Acidobacteria896Open in IMG/M
3300017935|Ga0187848_10250909All Organisms → cellular organisms → Bacteria → Acidobacteria747Open in IMG/M
3300017938|Ga0187854_10188576All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis917Open in IMG/M
3300017941|Ga0187850_10252772All Organisms → cellular organisms → Bacteria → Acidobacteria792Open in IMG/M
3300017946|Ga0187879_10682552All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis572Open in IMG/M
3300017948|Ga0187847_10049744All Organisms → cellular organisms → Bacteria → Acidobacteria2398Open in IMG/M
3300017975|Ga0187782_11667955All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300018004|Ga0187865_1245413All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300018009|Ga0187884_10402716All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300018013|Ga0187873_1085045All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1275Open in IMG/M
3300018015|Ga0187866_1266762All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300018024|Ga0187881_10017742All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4053Open in IMG/M
3300018040|Ga0187862_10516062All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300018046|Ga0187851_10543029All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium658Open in IMG/M
3300018057|Ga0187858_10373165All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300018085|Ga0187772_10092784All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1933Open in IMG/M
3300018086|Ga0187769_11119640All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300018088|Ga0187771_10691767All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300020579|Ga0210407_10068810All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2655Open in IMG/M
3300020583|Ga0210401_10552784All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1013Open in IMG/M
3300021404|Ga0210389_10051020All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3174Open in IMG/M
3300021861|Ga0213853_10846986All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis508Open in IMG/M
3300025498|Ga0208819_1097836All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium623Open in IMG/M
3300026318|Ga0209471_1251021All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300026480|Ga0257177_1013459All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1108Open in IMG/M
3300026498|Ga0257156_1108338All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300026552|Ga0209577_10203552All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1519Open in IMG/M
3300026552|Ga0209577_10370154All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1046Open in IMG/M
3300026557|Ga0179587_11141553All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300027535|Ga0209734_1091014All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300027635|Ga0209625_1010062All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2052Open in IMG/M
3300027645|Ga0209117_1000694All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis12907Open in IMG/M
3300027667|Ga0209009_1071070All Organisms → cellular organisms → Bacteria → Acidobacteria876Open in IMG/M
3300027738|Ga0208989_10286523All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300027745|Ga0209908_10090523All Organisms → cellular organisms → Bacteria → Acidobacteria743Open in IMG/M
3300027824|Ga0209040_10167434All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300027829|Ga0209773_10392110All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300027853|Ga0209274_10643086All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis548Open in IMG/M
3300027854|Ga0209517_10486824All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium675Open in IMG/M
3300027903|Ga0209488_10276769All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1255Open in IMG/M
3300028651|Ga0302171_10061371All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis907Open in IMG/M
3300028759|Ga0302224_10369332All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300028773|Ga0302234_10310628All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300029636|Ga0222749_10594462All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300029917|Ga0311326_10021880All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3906Open in IMG/M
3300030007|Ga0311338_10350765All Organisms → cellular organisms → Bacteria1605Open in IMG/M
3300030052|Ga0302217_10151409All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300030707|Ga0310038_10018397All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4407Open in IMG/M
3300030991|Ga0073994_12355876All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300031234|Ga0302325_11371311All Organisms → cellular organisms → Bacteria → Acidobacteria923Open in IMG/M
3300031244|Ga0302297_1109887All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300031344|Ga0265316_10655558All Organisms → cellular organisms → Bacteria → Acidobacteria742Open in IMG/M
3300031525|Ga0302326_11993286All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300031718|Ga0307474_10272210All Organisms → cellular organisms → Bacteria → Acidobacteria1300Open in IMG/M
3300031754|Ga0307475_10892485All Organisms → cellular organisms → Bacteria → Acidobacteria702Open in IMG/M
3300031823|Ga0307478_11734527All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300031962|Ga0307479_10321316All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1530Open in IMG/M
3300031962|Ga0307479_12162519All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300032205|Ga0307472_100572617All Organisms → cellular organisms → Bacteria → Acidobacteria991Open in IMG/M
3300032828|Ga0335080_10345530All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1606Open in IMG/M
3300032892|Ga0335081_10187140All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2888Open in IMG/M
3300033402|Ga0326728_10698721All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland14.95%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.35%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland7.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.54%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog5.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.61%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil4.67%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.67%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.67%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.74%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.74%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.80%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.87%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.87%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.87%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.87%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.87%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.87%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.93%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.93%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.93%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009549Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100EnvironmentalOpen in IMG/M
3300009617Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100EnvironmentalOpen in IMG/M
3300009629Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100EnvironmentalOpen in IMG/M
3300009640Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300015203Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018004Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018015Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025498Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027535Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027745Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2MEnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028651Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028773Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029917I_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030052Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_3EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031244Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_2EnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12269J14319_1029008113300001356Peatlands SoilVSPNSTPSVWSALRRWWREQARENGAARTISLLLSNLWSFARDSTPERRRQRYGDMEYDWEHRVNTTSATVGWQARLLGLFHSPYQPTDSALFHEMMASLPIAYEHFT
Ga0062387_10019202213300004091Bog Forest SoilVSSSFPRQFWRSFHGWWREQSRSVGAANATSLLLRKIGNFLLESTPAQRRRRYGDMEYDWEKRVNTTGGTVGWRTRLLGSFHSPYQPTEPELFREMMDALPIQ
Ga0062387_10048072913300004091Bog Forest SoilVPSSFPRQLWTAFGRWWREQAREKGSTGAACLLVHLLWNFVRESTPERRRQRYGDMDYDWEHRVNTTSGTVGWRERLLGLFHSPYQPTEPALFQEMMAS
Ga0062386_10013370033300004152Bog Forest SoilVSSSFPQQFWSAFRRWWQEQSLASGAARAASLLAANLWGFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVGWRARLLGLFHSPYQPTEPSLFQEMMSSLPIAFDQFTFVDLG
Ga0066679_1103818613300005176SoilVSSSFPQQFWRALRGWWREQTRETGAASAASRLVGKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFYSPYQPTEPALFQEMMASLPIEFDQFTFI
Ga0070708_10134584523300005445Corn, Switchgrass And Miscanthus RhizosphereLRRWWREQAREKGAARTTSLLVRKLWSFVRESTPEQRRQRYGDMEYDWEHRVNTTSGTVSWRALLLGLFHSPYQPTEPALFQEMMASLP
Ga0070766_1061379813300005921SoilMLILFRTWWRDQTQERGVASTTFLLFRNLWIFLRDSTPERRRQRYGDMEYDWEHRVNTTSGTLSWRERLLGTFHSPYQPTDPALFQEMMSALPIQFDEFTFIDIG
Ga0075015_10012005223300006102WatershedsVSQKFSQQLQNAFRRWWKEQASQKGVLRASSLLARELWGFLRDSTPAGRRQRYGDMDYDWEHRVNTTSGTVGWRERLLGVFHSAYQPTDPVLFREMMAALPIQFDQFTFV
Ga0075030_10128992513300006162WatershedsVSAEFPQQLWTAFRGWWREQAEAKGALGASCALLRELRDFARDSTPERRRQRYGDMEYDWQHRVNTTSGTVGWRERLLGVFHSPYQPTDPAQFREMMAALPIDFREFTFVDLG
Ga0116128_100368973300009518PeatlandVLRGWWREQAREKGAWNATSLLVRNLWDFVRDSTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLGLFYSPYQPTEPTLFREMMASLPIEFDQFTFVDLGSG*
Ga0116218_152938013300009522Peatlands SoilMIPFWSALRSWWREQARENGALSAASLLIQNLWTFVRESTPERRRQRYGDMEYDWEHRVNTNSGTVGWRARRLGLFHSPYQPTDPALFR
Ga0116137_104492913300009549PeatlandVLRGWWREQAREKGAWNATSLLVRNLWDFVRDSTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLGLFYSPYQPTEPTLF
Ga0116137_116870113300009549PeatlandHAGVSSRGFPRQLWSAFRRWWREQSRQKGVVGASTALACDLWGFARESTPERRRQRYGDMEYDWEHRVDKTSSTVGWRSRLLGLFLSPYQPTEPALFREMMASLPIEFDQFTFVDLGSG*
Ga0116123_120219913300009617PeatlandVSSSFPRQIWKALRDWWREQARETGAGRTCSLLAGKLWDFMRESTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLGLFHSAYQPTDAALFREMMARLSLEGELEGKLGGKPIEFERFTFVDIG
Ga0116119_106927523300009629PeatlandVSSSCRQQFWSALRSWWREQAREKGSFGASSLLIRNLWAFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVGWQARLLGCFHSPYQPTEP
Ga0116119_111272123300009629PeatlandVSSSSPQQFWSAFGRWWREQAREQGARRATSLLIRNLWSFVRESTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLVLFHSPYQPTDPELFRE
Ga0116126_103111113300009640PeatlandVLRGWWREQAREKGAWNATSLLVRNLWDFVRDSTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLGLFYSPYQPT
Ga0116217_1007128613300009700Peatlands SoilMSSRGFPRQLWNALRSWWREQASEKGAASACFLLVRNLWDFARESTPEHRRRRYGDMEYDWEYRVNTTSGTVGWHTRLLGLFHSPYQPTDPALF
Ga0074045_1074220123300010341Bog Forest SoilVSSSFPQPFWSAFRRWWREQSRANGAARTASLLAANLWSFARDSTPERRRQRYGDMEYDWEHRVNTTSGTVGWRARLLGLFHSP
Ga0074045_1085061913300010341Bog Forest SoilVSSSFPQQFWSAFRRWWQEQSLASGAARAASLLAANLWGFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVGWRARLLGLFHSPYQPTEPSLFQEMMSSLPIAFDQF
Ga0126370_1190842713300010358Tropical Forest SoilVSASVFLGQLRSGFAAWWDRTVRENGAWRAPWLLAVQLWGFLRDSTPERRRQRYGDMDYDWEHRVNTTSGTVRWRERLLGIFHSPY
Ga0137392_1048087923300011269Vadose Zone SoilMIQFWSALRSWWREQAREKGAASTTSLLVRSLWSFVCESMPERRRQRYGDMEYDWEHRVNTTSGTVGWRGRLLGLFHPPYQPTDPALFQE
Ga0137391_1020187223300011270Vadose Zone SoilMIQFWRVLRGWWREQAREKGAASTTSLLVRNLWSFVRESMPERRRQRYGDMEYDWEHRVDTTSGTAGWRARLLGFRQGTNAADGFGVSV*
Ga0137387_1037975913300012349Vadose Zone SoilVTPPAFHRQLWSALRGWWREHSRQKGAAAASTLLVHELWTFLRDSTPERRRRRYGDMEYDWEHRVNTTSGTVGWRERLLGVFHSPYQPTDAALFQEMM
Ga0137371_1078066633300012356Vadose Zone SoilVTPPAFHRQLWSALRGWWREHSRQKGAAAASTLLVHELWTFLRDSTPERRRRRYGDMEYDWEHRVNTTSGTVGWRERLLGVFHSPYQPTDAALFQEMMASLPIDFSEFTFMDLG
Ga0137390_1160871623300012363Vadose Zone SoilVSSSFPQQFWRALRNWWREQAREKGAASTTSLLVRKLWSFVRESTPERRRRRYGDMEYDWEHRVNTTSGTVGWRARLLGLFHSPYQPTDPALFQEMMA
Ga0137395_1054852423300012917Vadose Zone SoilVSLSFSQQFRRALRGWWREQTRETGAASAAFRLVGKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPTEPALFREMMASLPIEF
Ga0137359_1084226123300012923Vadose Zone SoilVTPPAFHRQLWSALRGWWREQSRQKGAAVASILLVHELWAFLRDSTPERRRRRYGDMEYDWEHRVNTTSGTVGWRERLLGVFHSPYQPTDAALFQEMMASLPINFNEFTFVDLGS
Ga0137416_1189754923300012927Vadose Zone SoilVSSGFPQQFWRALRSWWREHAKEKDAASAASLLVGKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVRWRARLLGLFHSPYQPTE
Ga0126369_1141565713300012971Tropical Forest SoilMTEPPFTRQLARAVRDWWREASARAGAASAGAHLIRELWEFLRDSTPERGRRRYGDAEYDWEHRVNTTSGTVGWRERLLGTFLSAYQPSDPE
Ga0181524_1005604013300014155BogVSSSSPQQFWSAFGRWWREQAREQGARRATSLLIRNLWSFVRESTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLVLFHSPYQPTDPELF
Ga0181524_1036958123300014155BogVSSSFPQQFCSALRSWWREHAGEKGATAATSLLVRNLWIFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVGWRARLLGLFHS
Ga0181518_1044404713300014156BogVSADFPQPFWSAFRRWWREQARETGALSAASLLIRTLWTFVSESTPERRRQRYGDMEYDWEHRVNTTTGTVGWRARLLGLFHSPYQPTDPALFREMM
Ga0181530_1051165023300014159BogVSSSSSQPFWKLLRGWWREQARKNGSASAASLLARNLWSFVRESTPERRRQRYGDMDYDWENRVNTTSGTVGWRARLLGLFHSPYQPTEPALFCDMM
Ga0181532_1019838823300014164BogVSSDFPQPFWSALRSWWREQARENGTLSVASLLIRNLWAFVRDSTPERRRRRYGDMEYDWEHRVNTTSGTVGGPARLLGLLHSPYQPTDPALFREMMASLPIEFDQFTFVDLGPARDGRC
Ga0181534_1074193123300014168BogVSSSFPQQFWSGLRNWWREQADANGLTGAASLLARNLWGFVRDSTPERRRSRYGDMDYDWEHRVNTTSAAVGWYDRLLGVFHSPYQPTEP
Ga0182018_1005091243300014489PalsaMIQFWSALRRWWREQAREKGAAAATSLLIHNLWTFVRESTPERKRQRYGDMEYDWEHRVNTTSGTVGGRARLLGLFHSAYQPTD
Ga0182014_1022307413300014491BogVSSSSSQQFWTALRNWWREQTSEKGAWSASSLLARNLWSFVRESTPERRRRRYGDMEYDWENRVNTSSGTVGWRARLLGLFHSPYQPTDAAL
Ga0182017_1017100433300014494FenVSSNFPQQFWTALRGWWREQAREKGAWSASSLLARNLWTFVRESTPERRRQRYGDMEYDWENRVNTSSGTVDWRARLLGWFHSP
Ga0182019_1010351933300014498FenVSSSFPQQFWTGLRNWWREQSRENGAWSASSLLARNLWAFVRESTPERHRQRYGDMEYDWEERVNTSSGTVGWRTRLLGSFHSPYQPTDPALFREM
Ga0182012_1008472063300014499BogVSSGQSFLAQFGSGLWGWWREHAAKVGQARAAALLVGNLWDFVVDSTPARRRRRYGDMEYDWEKRVNTTSGTVGWRARLLGVFHSPYQPTEPELFREMMGALPIE
Ga0167668_100769943300015193Glacier Forefield SoilVSSSFPQQFWRALRSWWHEPAKAKGAANAPSLLVRKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPTEPALFQE
Ga0167650_103556323300015203Glacier Forefield SoilMWWRENARENGTAATTSLLLRNFWSFTRDSTPERRRQRYGDMEYDWENRVNTTCGTVGWRSRLLGLFHSPYQ
Ga0187849_1005626103300017929PeatlandVLRGWWREQAREKGAWNATSLLVRNLWDFVRDSTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLGLFYSPYQPTEPTLFREMMASLPIEFDQFTFVDLGSG
Ga0187877_106848513300017931PeatlandMIQFWSALRSWWREQARENGTLSAASLLIRNLWAFVRDSTPERRRRRYGDMEYDWEHRVNTTSGTVGGPARLLGLFHSPYQPTDPALFREMMASLPIALDTFTF
Ga0187848_1018668023300017935PeatlandVSSSSPQQFWSAFGRWWREQAREQGARRATSLLIRNLWSFVRESTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLVLFHSPYQPTDPELFREMMASLS
Ga0187848_1025090913300017935PeatlandVSSSSPQQFWTALRNWWREQAREKGAWSASSLLARNLWSFVRESTPERRRRRYGDMEYDWENRVNTSSGTVGWRARLLGLFHSPY
Ga0187854_1018857623300017938PeatlandMIQFWSALRSWWREQARENGTLSAASLLMRNLWAFVRDSTPERRRRRYGDMEYDWEHRVNTTSGTVGGSARLLGLLHSPYQPT
Ga0187850_1025277213300017941PeatlandMIQFWSALRSWWREQARENGTLSAASLLIRNLWTFVRESTPERRRRRYGDMEYDWEHRVNTTSGTVGGPARLLGLLHSPYQPTDPA
Ga0187879_1068255213300017946PeatlandVSSDFPQPFWSAFRSWWREQARENGALSAASLLFRNLCAFVRDSTPERRRQRYGDMEYDWEHRVNTTSGTVGWRARLLGLFHSPYQPTDPALFREMMAGLTAAGKPIAFDQFTFVDLGSG
Ga0187847_1004974413300017948PeatlandVSSVFLPQLRAALRDWWREQTSSKGVAGAAFLLVRELWGFALESTPAQRRQRYGDMDFDWEQHVNTTSGAVSWRTRLLGIFHSPYQPTDPALFREMMAALPIDF
Ga0187782_1166795513300017975Tropical PeatlandVASDFPSQLLRTLARWWREHAQDEGRLGAGRALVRDLWGFVRGSTPGQKRSRYGDMEYDWEQRVNTTAGTVGWRTRLLGVFHSPYQPTEPELFREMMAALPI
Ga0187865_124541323300018004PeatlandMIQFWSALRSWWREQARENGTLSAASLLIRNLWAFVRDSTPERRRRRYGDMEYDWEHRVNTTSGTVGGPARLLGLFHSPYQPTDPALFREMMASLP
Ga0187884_1040271623300018009PeatlandVSSSFPQQFCSALRSWWREHAGEKGATAATSLLVRNLWIFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVGWRARLLGLFHSPY
Ga0187873_108504523300018013PeatlandMIQFWSALRSWWREQARENGTLSAASLLMRNLWAFVRDSTPERRRRRYGDMEYDWEHRVNTTSGTVGGSARLLGLLHSPYQPTDPALFREMM
Ga0187866_126676213300018015PeatlandVSSSCRQQFWSALRSWWREQAREKGSFGASSLLIRNLWAFVRESTPERRRQRYGDMEYDWEHRVNTTSGAVGWRARLLGLFYSPYQPTDPTLFQEMIASLPIAFDQFTFVDLGSG
Ga0187881_1001774213300018024PeatlandVSSSSPQQFWSAFGRWWREQAREQGARRATSLLIRNLWSFVRESTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLVLFH
Ga0187862_1051606213300018040PeatlandVSSSFPQQFWSGLRNWWREQADANGLTGAASLLARNLWGFVRDSTPERRRSRYGDMDYDWEHRVNTTSGTVGWQARLLGCFHSPYQPTEPVLFHEMMASLPIAFDTFTF
Ga0187851_1054302913300018046PeatlandVSSDSHQPFWSALSRWWSEQRQQNGATSATSLLLRNLWSFVRDSTPERRRQRYGDMEYDWEHHVNTTSGTVGWQARLRGLFHSPYQPTDPALFQEMMAS
Ga0187858_1037316523300018057PeatlandSSSSPQQFWAVLRGWWREQAREKGAWNATSLLVRNLWDFVRDSTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLGLFYSPYQPTEPTLFREMMASLPIEFDQFTFVDLGSG
Ga0187772_1009278433300018085Tropical PeatlandMPGDFSQQLWTAFRGWWREHSQAQGAWGASLLLARELWEFAYESTPERRRSRYGDMNYDWEHRVNTTAGTVGWRARLLGLFHTAYQPT
Ga0187769_1111964023300018086Tropical PeatlandMPGDFSQQLWTAFRGWWREHSQAQGAWGASLLLARELWEFAYESTPERRRSRYGDMNYDWEHRVNTTAGTVGWRARLLGLFHT
Ga0187771_1069176713300018088Tropical PeatlandVFSSFLQQFWIGLRDWWREQSGEKGAASAASLLIRNLWGFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVGWRTRLLGLLHS
Ga0210407_1006881013300020579SoilVASSFPQQFWRALRGWWREPAKEKGAANAPSLLVRNLWSFARESTPGRRRQRYGDMEYDWEHRVNTTSGTVSWRARLLG
Ga0210401_1055278413300020583SoilVSSSFPQQFWRALRSWWHEQAKEKGAANAPSLLVRKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPTEPALFQEMMA
Ga0210389_1005102043300021404SoilVHLSSRQRSFLPQSFLRQLWSALRGWWHEQSRELGAAKAAFLLVRNLWSFVLDSTPERRRQRYGDMEYDWENRVNTTGGTVGWRMRLLGLFYSPYQPTEPALFREMMASLPIAFDTFTLSTLVRVRDARC
Ga0213853_1084698613300021861WatershedsVSAEFPQQLWTAFRGWWREQAEAKGALGASCALLRELRDFARDSTPERRRQRYGDMEYDWQHRVNTTSGTVGWRERLLGVFHSPYQPTDPAQFREMMAALPIDFREFTFVDLGS
Ga0208819_109783613300025498PeatlandVLRGWWREQAREKGAWNATSLLVRNLWDFVRDSTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLGLFYSPYQPTEPTLL
Ga0209471_125102123300026318SoilVPLGFPQQFWSALRDWWREQPRDQSFARTGTLLIDKLWEFIHESSPERRRQRYGDMEYDWENRVNTTSGTVGWRERLLGSFHSPYQP
Ga0257177_101345923300026480SoilMIQFWRVLRGWWREQAREKGAASTTSLLVRNLWSFVRESMPEHRRQRYGDIEYDWENRVNTTSGTAGWRARLLGFRQGTNAADGFGVSV
Ga0257156_110833813300026498SoilVSSSFPQQFWRALRSWWREPAKEKGAANTPSLLVRKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPTEPALFQEMMASLPIEFDQFTFIDLG
Ga0209577_1020355233300026552SoilVPLGFPQQFWSALRDWWREQPRDQSFARTGTLLIDKLWEFIHESSPERRRQRYGDMEYDWENRVNTTSGTVGWRERLLGSFHSPYQPTEPG
Ga0209577_1037015423300026552SoilVSSSFPQQFWRTLRGWWREQTRETGAASATSRLVGKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPTEPALF
Ga0179587_1114155323300026557Vadose Zone SoilVSSGFPQQFWRALRNWWREQAREKGAASAASLLIRNLWAFVRESTPERRRRRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPTEPALFQEMMASLPIE
Ga0209734_109101423300027535Forest SoilVSSSFPQQFWRALRSWWHEQAKENGAANAPSLLVRKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPTEPALFQEMMASLP
Ga0209625_101006233300027635Forest SoilVSSSFPQQFWRALRSWWHEQAKEKGAANAPSLLVRKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHS
Ga0209117_100069413300027645Forest SoilVPSSFPQQFWRALRGWWREQAREKGAASTAFLAVRNLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVGWRARLLGLFHSPYQPTEPTLF
Ga0209009_107107013300027667Forest SoilVPLGFTQQFWRELRGWWREQAREKGAWSATRLLIRNLWAFVRESTPECRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPTEPALFQE
Ga0208989_1028652323300027738Forest SoilVSSRFPQQFWRALRNWWREHAKEKGALSITSLLLRNLWGFARESTPERRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPS
Ga0209908_1009052323300027745Thawing PermafrostMIQFWSALRRWWREQAREKGAAAATSLLIHNLWTFVRESTPERKRQRYGDMEYDWEHRVNTTSGTVGGRARLLGLFHSAYQPTLSLIHI
Ga0209040_1016743423300027824Bog Forest SoilVSFSSSPQFLRTLRAWWLEQAREKGATSASALLVRNLWSFVRESTPERRRRRYGDMEYDWEHRVNTTSGTVGWRTRLLGLFYSP
Ga0209773_1039211013300027829Bog Forest SoilLREWWREESRAKGAAGASSLLIRNLLSFARDSTPERRRQRYGDMEYDWEHRVNTTSGTVGWQARLLGLFHSPYQPTDPSLFREMMACLPIAFDRFT
Ga0209274_1064308613300027853SoilVNSSSRQRSALQPSVFRPFYSGLRLWWQEQARENGAVKASSLLVRNLWGFVRDSTPERRRQRYGDMEYDWENRVNTTSGTVGWRVRLLGLFHSPYQPTDPALFREMMASLSIAFDTF
Ga0209517_1048682423300027854Peatlands SoilMSGVSSSFPQQFSRALRRWWGEQASEKGAGSATSLLVRNLWTFVRESTPERRRRSYGDMEYDWENRVNTTSGTVGWRARLLGLFHSPYQPTDPALFREMMA
Ga0209488_1027676913300027903Vadose Zone SoilVSSSFPQQFWRALRGWWREQTRETGAASAAFRLAGKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVSRRARLLGLFHSPYQPTEP
Ga0302171_1006137123300028651FenVPSDFPRQLSAAFRNWWREQSRAQGAPAATSLLLTELWGFLSDSTPERRRSRYGDMEYDWEHRVNTTSGSVGWRERLLGVFHSPYMPTDPVQFLEMMTALPIDFRTFTFVDLGSG
Ga0302224_1036933223300028759PalsaMLKFLRTWWRDQIQERGIVSATALLFRNLWSFLRDSTPERRRQRYGDMEYDWEHRVNTTSGTLGWRERLLGTFHSPYQPTDPALFREMMSALPIQFDKFT
Ga0302234_1031062823300028773PalsaMLKFLRTWWRDQIQERGIVSATALLFRNLWSFLRDSTPERRRQRYGDMEYDWEHRVNTTSGTLGWRERLLGTFHSPYQPTDPALFREMMS
Ga0222749_1059446213300029636SoilVSSSFPQQFWRALRSWWRELAKEKGAANAPSLLVRKLWSFVRESTPERRRQRYGDMEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPTEPALFQE
Ga0311326_1002188053300029917BogVSSSFPQQFWSGLRNWWREQADANGLTGAASLLARNLWGFVRDSTPERRRSRYGDMDYDWEHRVNTTSGTVGWQARLLGCFHSPYQPTEP
Ga0311338_1035076533300030007PalsaMLSSWWREQAREKGAAAASAILIRYFWTFVRESTPSRRRQRYGDMEYDWEHRVNTTSGTVDWRSRLRGLFHSPYQPTDPALFHEMMG
Ga0302217_1015140913300030052FenVSSHEFPEQLWNAFCRWWREQARQKGLARASFALAHELWRFVRDSTPARRRGRYGDMEYDWEHRVNTTSGTVGWGQRLLGIFHSPYQPTDPELFREM
Ga0310038_1001839773300030707Peatlands SoilVSSNFPRQFWSALDGWWREQASENGAWSAGSLLLRNLWAFVRESTPERRRRRYGDMEYDWENRVNTSSGTVGWRERLLGLFHSAYQPTEPALFREMMASLPIE
Ga0073994_1235587613300030991SoilVSSSFPQQFWRALRGWWREQTHEKGTATAASLLLRNLWSFVRESTPERRRHRYGDMEYDWEHRVNTTSGSVGWRQRLLGAFHSPYQPTDAALFQEMMGSLP
Ga0302325_1137131123300031234PalsaVSSTFREQFRRALADWWHEQAIAHGAVATTSLLLKNLWSFARDSTPERRRQRYGDMDYDWEHRVDTTSGTVDWRARLLGLFHSPYQPTEPELFREMMAALPIEFDRFT
Ga0302297_110988713300031244FenVPSDFPRQLSAAFRNWWREQSRAQGAPAATSLLLTELWGFLSDSTPERRRSRYGDMEYDWEHRVNTTSGSVGWRERLLGVFHSPYMPTDPVQ
Ga0265316_1065555813300031344RhizosphereVSPPLFARQLWTSLRGWWREHSRENGVASTSVLLTRELWDFFRDSTPERRRRRYGDIEYDWKHRVNTTSGTVGWRERLLGVFLSGYQPTEPAAFQEMMASLPI
Ga0302326_1199328623300031525PalsaMLLSWWRDQVRETGPAAATSLLIRNLWTFVRESTPERGRQRYGDMEYDWEHRVNTTSGSVGWRVRLLGLFHSAYQPTDPA
Ga0307474_1027221013300031718Hardwood Forest SoilVSSSFPQQLWRALRGWWREQARERGATRATSLLVRNLWNFVRESTPEQRRQRYGDMEYDWEHRVNTTSGTVNWRARLLGVFHSPYQPTEPALFQEMMA
Ga0307475_1089248523300031754Hardwood Forest SoilVPLGLTRQFCRELRRWWREQAREKGAASAASLLVRKLGSFVRESTPERRRQRYGDMDYDWEHRVNTTSGTVSWRAQLLGLFHSPYQPTAPALFHEMMASLPIEFDQFTF
Ga0307478_1173452713300031823Hardwood Forest SoilVPLGFTRQFWRELRGWWREQAREKGARSATRRLFRNLWSFVRESTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLGLFHSPYQPTDPALFREMMASLPIEFD
Ga0307479_1032131613300031962Hardwood Forest SoilVPSNFPRQFWSALRDWWREQPRDQSFVRTSTLFIDKLWEFIRESTPERRRKRYGDMEYDWENRVNTTSGTVGWRERLLGSFRSPYQPTEPGLFRE
Ga0307479_1216251913300031962Hardwood Forest SoilLRRWWREQAREKGAASAASLLVRKLGSFVRESTPERRRQRYGDIEYDWEHRVNTTSGTVSWRARLLGLFHSPYQPTE
Ga0307472_10057261713300032205Hardwood Forest SoilVPSNFPRQFWSALRDWWREQPRDQSFVRTSTLFIDKLWEFIRESTPERRRQRYGDMEYDWENRVDTTSGAVGWRDRLLGSFHS
Ga0335080_1034553033300032828SoilVSSTFRRQLRKELSTWWREQRRNRSFAGASVLLLKNLWSFARESTPERRRRRYGDMEYDWEHRVNTTSGTVDWRSRLLGSFLSPYQPTEPELFQE
Ga0335081_1018714013300032892SoilVSAFLKQLRNAFFSWWNQHARQHGVIGASALLMRELRGFLRDSTPGRRRQRYGDMDYDWEHRVNTTSGTVGWRERLLGVFLSPYQPTDPALF
Ga0326728_1069872113300033402Peat SoilVSSGSFRQFWRALRDWWRALASEIGAWRATYLLARNLWSFVRESTPERRRQRYGDMEYDWENRVNTTSGTVGWRARLLGLFHSPYQPTEPALFREMMASLSSTGTPIAFDTFTFVDLGSG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.