Metagenome Family F091145

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091145
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	47 residues
Representative Sequence	RFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Number of Associated Samples	60
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	92.52 %
% of genes from short scaffolds (< 2000 bps)	71.96 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.570 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (49.533 % of family members)
Environment Ontology (ENVO)	Unclassified (73.832 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.093 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.08% β-sheet: 0.00% Coil/Unstructured: 22.92%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00561	Abhydrolase_1	7.48
PF02371	Transposase_20	6.54
PF04264	YceI	1.87
PF07478	Dala_Dala_lig_C	1.87
PF00834	Ribul_P_3_epim	1.87
PF13473	Cupredoxin_1	0.93
PF01844	HNH	0.93
PF09360	zf-CDGSH	0.93
PF04095	NAPRTase	0.93
PF12704	MacB_PCD	0.93
PF02518	HATPase_c	0.93
PF13649	Methyltransf_25	0.93
PF00480	ROK	0.93
PF13751	DDE_Tnp_1_6	0.93
PF07589	PEP-CTERM	0.93
PF02566	OsmC	0.93
PF01609	DDE_Tnp_1	0.93
PF04191	PEMT	0.93
PF01494	FAD_binding_3	0.93
PF08207	EFP_N	0.93
PF14319	Zn_Tnp_IS91	0.93
PF05598	DUF772	0.93
PF01218	Coprogen_oxidas	0.93
PF01436	NHL	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	6.54
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.87
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	1.87
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.87
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	1.87
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.93
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.93
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.93
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.93
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.93
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.93
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.93
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.93
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.93
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.93
COG0408	Coproporphyrinogen-III oxidase HemH, oxygen-dependent	Coenzyme transport and metabolism [H]	0.93
COG0231	Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)	Translation, ribosomal structure and biogenesis [J]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.57 %
Unclassified	root	N/A	22.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.57 %
Unclassified	root	N/A	22.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.57 %
Unclassified	root	N/A	22.43 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.53 %
Unclassified	root	N/A	22.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.74 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	33.64 %
Unclassified	root	N/A	22.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.64 %
Unclassified	root	N/A	22.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.54 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.80 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.93 %
Kangiellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.64 %
Unclassified	root	N/A	22.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.54 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %
Kangiellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.64 %
Unclassified	root	N/A	22.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.54 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.80 %
Kangiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella	0.93 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.64 %
Unclassified	root	N/A	22.43 %
Bradyrhizobium barranii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii	2.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.80 %
Kangiella aquimarina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella → Kangiella aquimarina	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.64 %
Unclassified	root	N/A	22.43 %
Bradyrhizobium barranii subsp. barranii	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	2.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.80 %
Kangiella aquimarina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella → Kangiella aquimarina	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005167\|Ga0066672_10678761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300005332\|Ga0066388_102585398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300005332\|Ga0066388_103810997	Not Available	769	Open in IMG/M
3300005332\|Ga0066388_105451559	Not Available	645	Open in IMG/M
3300005764\|Ga0066903_100362251	All Organisms → cellular organisms → Bacteria	2354	Open in IMG/M
3300005764\|Ga0066903_108609175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella → Kangiella aquimarina	519	Open in IMG/M
3300010048\|Ga0126373_10006746	All Organisms → cellular organisms → Bacteria → Acidobacteria	9019	Open in IMG/M
3300010048\|Ga0126373_10442745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1332	Open in IMG/M
3300010048\|Ga0126373_10996933	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300010048\|Ga0126373_11266642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	803	Open in IMG/M
3300010361\|Ga0126378_10021177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5621	Open in IMG/M
3300010361\|Ga0126378_13217418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	519	Open in IMG/M
3300010376\|Ga0126381_101013156	Not Available	1198	Open in IMG/M
3300010376\|Ga0126381_101124555	Not Available	1135	Open in IMG/M
3300010376\|Ga0126381_101394104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300010398\|Ga0126383_10407261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1398	Open in IMG/M
3300010398\|Ga0126383_10423913	Not Available	1373	Open in IMG/M
3300010398\|Ga0126383_11618862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	737	Open in IMG/M
3300012211\|Ga0137377_10364735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1382	Open in IMG/M
3300012349\|Ga0137387_10169782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1559	Open in IMG/M
3300015371\|Ga0132258_10897749	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300016270\|Ga0182036_10036604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2975	Open in IMG/M
3300016270\|Ga0182036_10059597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2440	Open in IMG/M
3300016270\|Ga0182036_10128482	All Organisms → cellular organisms → Bacteria → Acidobacteria	1771	Open in IMG/M
3300016270\|Ga0182036_10159583	Not Available	1615	Open in IMG/M
3300016270\|Ga0182036_10419466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300016270\|Ga0182036_10697406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300016270\|Ga0182036_10769889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300016270\|Ga0182036_11421513	Not Available	581	Open in IMG/M
3300016294\|Ga0182041_10050142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2819	Open in IMG/M
3300016294\|Ga0182041_10246577	Not Available	1451	Open in IMG/M
3300016319\|Ga0182033_10460539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1086	Open in IMG/M
3300016341\|Ga0182035_10001435	All Organisms → cellular organisms → Bacteria	12159	Open in IMG/M
3300016357\|Ga0182032_10373750	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300016357\|Ga0182032_10415752	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300016357\|Ga0182032_10519134	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300016357\|Ga0182032_10933794	Not Available	739	Open in IMG/M
3300016357\|Ga0182032_11120531	Not Available	675	Open in IMG/M
3300016357\|Ga0182032_11635191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300016371\|Ga0182034_11480729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300016371\|Ga0182034_11805655	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300016387\|Ga0182040_10155946	Not Available	1633	Open in IMG/M
3300016404\|Ga0182037_10065848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2487	Open in IMG/M
3300016422\|Ga0182039_10123122	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300016422\|Ga0182039_11257669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	670	Open in IMG/M
3300016422\|Ga0182039_12117567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300016445\|Ga0182038_10199918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1572	Open in IMG/M
3300016445\|Ga0182038_10559723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300016445\|Ga0182038_10793168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300021171\|Ga0210405_10837120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300021559\|Ga0210409_10735082	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300021560\|Ga0126371_10387370	All Organisms → cellular organisms → Bacteria → Acidobacteria	1538	Open in IMG/M
3300031544\|Ga0318534_10446222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300031545\|Ga0318541_10457939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300031561\|Ga0318528_10461565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300031572\|Ga0318515_10039080	All Organisms → cellular organisms → Bacteria	2350	Open in IMG/M
3300031682\|Ga0318560_10663989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	564	Open in IMG/M
3300031719\|Ga0306917_10163998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1659	Open in IMG/M
3300031719\|Ga0306917_10273548	Not Available	1299	Open in IMG/M
3300031719\|Ga0306917_11287386	Not Available	566	Open in IMG/M
3300031724\|Ga0318500_10153337	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300031736\|Ga0318501_10380689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300031744\|Ga0306918_10879118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300031754\|Ga0307475_10594090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300031777\|Ga0318543_10444511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300031820\|Ga0307473_11201667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300031821\|Ga0318567_10548785	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300031823\|Ga0307478_10058230	Not Available	2885	Open in IMG/M
3300031833\|Ga0310917_10258396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1173	Open in IMG/M
3300031879\|Ga0306919_10027842	All Organisms → cellular organisms → Bacteria → Acidobacteria	3521	Open in IMG/M
3300031879\|Ga0306919_10722370	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300031880\|Ga0318544_10026434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1989	Open in IMG/M
3300031890\|Ga0306925_10046060	All Organisms → cellular organisms → Bacteria	4530	Open in IMG/M
3300031890\|Ga0306925_10380489	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300031910\|Ga0306923_10053133	All Organisms → cellular organisms → Bacteria	4475	Open in IMG/M
3300031910\|Ga0306923_10161193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2561	Open in IMG/M
3300031910\|Ga0306923_10627396	All Organisms → cellular organisms → Bacteria → Acidobacteria	1204	Open in IMG/M
3300031910\|Ga0306923_11235537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300031912\|Ga0306921_10009589	All Organisms → cellular organisms → Bacteria → Acidobacteria	10278	Open in IMG/M
3300031912\|Ga0306921_10078282	All Organisms → cellular organisms → Bacteria	3805	Open in IMG/M
3300031912\|Ga0306921_11912730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300031941\|Ga0310912_10354254	Not Available	1140	Open in IMG/M
3300031942\|Ga0310916_10701367	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300031945\|Ga0310913_10011669	All Organisms → cellular organisms → Bacteria	5279	Open in IMG/M
3300031946\|Ga0310910_11459222	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031947\|Ga0310909_10081862	All Organisms → cellular organisms → Bacteria → Acidobacteria	2562	Open in IMG/M
3300031947\|Ga0310909_10160990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1850	Open in IMG/M
3300031947\|Ga0310909_11196918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	614	Open in IMG/M
3300031954\|Ga0306926_10910617	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300031959\|Ga0318530_10031115	All Organisms → cellular organisms → Bacteria → Acidobacteria	1914	Open in IMG/M
3300031959\|Ga0318530_10132238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1007	Open in IMG/M
3300032001\|Ga0306922_10601129	All Organisms → cellular organisms → Bacteria → Acidobacteria	1165	Open in IMG/M
3300032035\|Ga0310911_10463480	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300032052\|Ga0318506_10390709	Not Available	617	Open in IMG/M
3300032076\|Ga0306924_10027708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6113	Open in IMG/M
3300032076\|Ga0306924_10173177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2475	Open in IMG/M
3300032076\|Ga0306924_12543165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300032261\|Ga0306920_100010442	All Organisms → cellular organisms → Bacteria	12460	Open in IMG/M
3300032261\|Ga0306920_101262374	Not Available	1064	Open in IMG/M
3300033289\|Ga0310914_10076234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2835	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.07%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.39%
Loam	Environmental → Terrestrial → Soil → Loam	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	78.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	49.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066672_106787612	3300005167	Soil	YLMITKPDLATSLFILLGAIVVGLISAATAWTARPRSHS*
Ga0066388_1025853982	3300005332	Tropical Forest Soil	FLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP*
Ga0066388_1038109971	3300005332	Tropical Forest Soil	LTLIRVRFLLALGILYLMIAKPDLVTSLFILLGAIVVGLISAATARTARSASRS*
Ga0066388_1054515591	3300005332	Tropical Forest Soil	IRVRFLLALGILYLMIAKPGLTTSLFILLGAIVVGLISAATAWMARPVSLP*
Ga0066903_1003622511	3300005764	Tropical Forest Soil	GILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASVP*
Ga0066903_1086091752	3300005764	Tropical Forest Soil	LMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP*
Ga0126373_1000674617	3300010048	Tropical Forest Soil	VILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISATTAWTARPASLP*
Ga0126373_104427452	3300010048	Tropical Forest Soil	VILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP*
Ga0126373_109969331	3300010048	Tropical Forest Soil	DPVILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVAGLISATTAWTARPASLP*
Ga0126373_112666421	3300010048	Tropical Forest Soil	MIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP*
Ga0134080_102245542	3300010333	Grasslands Soil	VQGPMIITLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLVSAATAWTARPASLR
Ga0126378_100211771	3300010361	Tropical Forest Soil	ILYLMIAKPDLATSLFILLGAIVVGLIYAAKAWTARPASLP*
Ga0126378_132174181	3300010361	Tropical Forest Soil	YLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASVP*
Ga0126381_1010131562	3300010376	Tropical Forest Soil	LIRVRFLLALGILYLMIAKPDLVTSLFILLGAIVVGLISAATARTARSASRS*
Ga0126381_1011245551	3300010376	Tropical Forest Soil	LYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP*
Ga0126381_1013941043	3300010376	Tropical Forest Soil	RFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWRARPASLP*
Ga0126383_104072612	3300010398	Tropical Forest Soil	AKPDLATSLFILLGAIVVGLISAATAWTARPASLS*
Ga0126383_104239132	3300010398	Tropical Forest Soil	DLATSLFILLGAIVVGLISAATAWTARPASLPTGNS*
Ga0126383_116188621	3300010398	Tropical Forest Soil	LYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASVP*
Ga0137377_103647353	3300012211	Vadose Zone Soil	LMITKPDLATSLFILLGAIVVGLISAATAWTARPRSLS*
Ga0137387_101697821	3300012349	Vadose Zone Soil	KPDLATSLFILLGAIVVGLISAATAWAARPRSLS*
Ga0132258_108977493	3300015371	Arabidopsis Rhizosphere	IRVRFLLTLGILYLMITKPDLATSLFILLGAIVVGLISAATAWTARPRSLS*
Ga0182036_100366044	3300016270	Soil	ILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLTSAARAWTARPASLP
Ga0182036_100595971	3300016270	Soil	RFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0182036_101284821	3300016270	Soil	LGILYLMIAKPDLVTSLFILLGAIVVGLISAATARTARSASRS
Ga0182036_101595833	3300016270	Soil	LLALGILYLMIAKPDLATSLFILLGAIVAGLISATTAWRARPASLP
Ga0182036_104194661	3300016270	Soil	PVILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWKARPASLP
Ga0182036_106974062	3300016270	Soil	TLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0182036_107698892	3300016270	Soil	TLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWRARPASLP
Ga0182036_114215132	3300016270	Soil	LYVMITKPVLATALFILLGAIVVGLISAATAWTARPASLP
Ga0182041_100501421	3300016294	Soil	LGILYLMIAKPDLATSLFILLGAIVVGLISAATAWRARPASLP
Ga0182041_102465771	3300016294	Soil	DPVIPTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVAGLISATTAWRARPASLP
Ga0182033_104605392	3300016319	Soil	GILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLS
Ga0182035_100014351	3300016341	Soil	LIRVRFLLALGVLYVMITKPVLATALFILLGAIVVGLISAVTAWTARPASLP
Ga0182032_103737502	3300016357	Soil	ALGVLYVMIAKPVLATALFILLGAIVVGLISAATAWTARPASLS
Ga0182032_104157521	3300016357	Soil	LIRVRFLLALGILYLMIAKPDLATSLFILLGAIVAGLISATTAWRARPASLP
Ga0182032_105191342	3300016357	Soil	RFLLALGILYLMIAKPDLATSLFILLGAIVVGLISATAWTARPASLP
Ga0182032_109337942	3300016357	Soil	YVMITKPVLATALFILLGAIVVGLISAVTAWTARPASLP
Ga0182032_111205311	3300016357	Soil	LIRVRFLLALGILYLMIAKPDLATSLFILVGAIVVGLISAATAWTARPASLP
Ga0182032_116351911	3300016357	Soil	RFLLALGVLYVMIAKPDLATSLLILLGAIVVGLISAATAWTARPASLP
Ga0182034_107592181	3300016371	Soil	NPVILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWKARPKSLS
Ga0182034_114807291	3300016371	Soil	TLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLS
Ga0182034_118056551	3300016371	Soil	TLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISATAWTARPASLP
Ga0182040_101559461	3300016387	Soil	TLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVAGLISATTAWRARPASLP
Ga0182037_100658481	3300016404	Soil	TLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLTSAARAWTARPASLP
Ga0182039_101231221	3300016422	Soil	RVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATEWTARPASLP
Ga0182039_112576692	3300016422	Soil	RFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWRARPASLP
Ga0182039_121175672	3300016422	Soil	RVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAARAWTARPRSLP
Ga0182038_101999181	3300016445	Soil	RVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0182038_105597234	3300016445	Soil	VRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWKARPASLP
Ga0182038_107931681	3300016445	Soil	GILYLMIAKPDLATSLFILLGAIVVGLTSAARAWTARPASLP
Ga0182038_120123241	3300016445	Soil	DPVILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWKARPKSLS
Ga0210405_108371203	3300021171	Soil	LGILYLMITKPDLETSLFILFGAIVVGLISAATAWAARHRSLS
Ga0210409_107350822	3300021559	Soil	RVRFLLTLGILYLMITKPDLATSLFILLSAIVVGLISAATAWTARPRSLS
Ga0126371_103873703	3300021560	Tropical Forest Soil	LYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0318534_104462221	3300031544	Soil	QDPVIPTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0318541_104579391	3300031545	Soil	LTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLTSAARAWTARPASLP
Ga0318528_104615651	3300031561	Soil	IRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0318515_100390803	3300031572	Soil	LTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0318561_107258681	3300031679	Soil	QDPVILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVAGLISATTAWRARPASLP
Ga0318560_106639891	3300031682	Soil	IRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWRARPASLP
Ga0306917_101639982	3300031719	Soil	VRFLLALGILYLMIAKPDLATSLFILLGAIVVGLTSAARAWTARPASLP
Ga0306917_102735482	3300031719	Soil	VRFLLALGILYLMIAKPDLATSLFILVGAIVVGLISAATAWTARPASLP
Ga0306917_112873861	3300031719	Soil	YLMMAKPDLVTSLFILLGAIVVGLISAATARTARSASRS
Ga0318500_101533371	3300031724	Soil	LYLMIAKPDLATSLFILLGAIVVGLISAATGWRARPASLP
Ga0318501_103806891	3300031736	Soil	VRFLLALGILYLMIAKPDLATSLFILLGAIVAGLISATTAWRARPASLP
Ga0306918_108791182	3300031744	Soil	ILYLMIAKPDLATSLFILLGAIVVGLISAATAWRARPASLP
Ga0307475_105940902	3300031754	Hardwood Forest Soil	LTLGILYLMITKPDLATSLFILLSAIVVGLISAATAWTARPRSLS
Ga0318543_104445111	3300031777	Soil	LMIAKPDLATSLFILLGAIVVGLISAATAWRARPASLP
Ga0307473_112016671	3300031820	Hardwood Forest Soil	ILTLIRVRFLLTLGILYLMITKPDLATSLFILLGAIVVGLISAATAWTARPRSLS
Ga0318567_105487852	3300031821	Soil	VRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0307478_100582301	3300031823	Hardwood Forest Soil	ITKPDLATSLFILLGAIVVGLISAATAWTARPRSLS
Ga0310917_102583962	3300031833	Soil	GVLYVMITKPVLATALFILLGAIVVGLISAVTAWTARPASLP
Ga0306919_100278421	3300031879	Soil	FLLALGILYLMIAKPDLATSLFILLGAIVAGLISATTAWRARPASLP
Ga0306919_107223701	3300031879	Soil	VRFLLALGILYLMIAKPDLVTSLFILLGAIVVGLISAATARTARSASRS
Ga0318544_100264341	3300031880	Soil	LYLMIAKPDLATSLFILLGAIVVGLISAATAWRARPASLP
Ga0306925_100460601	3300031890	Soil	FLLALGILYLMIAKPDLATSLFILLGAIVVGLTSAARAWTARPASLP
Ga0306925_103804893	3300031890	Soil	IAKPDLATSLFILLGAIVVGLISAATAWTARPASLS
Ga0306925_122027941	3300031890	Soil	QDPVILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0306923_100531336	3300031910	Soil	PVILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLTSAARAWTARPASLP
Ga0306923_101611933	3300031910	Soil	TKPVLATALFILLGAIVVGLISAVTAWTARPASLP
Ga0306923_106273962	3300031910	Soil	AKPDLATSLFILLGAIVVGLISAATAWKARPASLP
Ga0306923_112355371	3300031910	Soil	YLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0306921_1000958915	3300031912	Soil	VILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0306921_100782826	3300031912	Soil	YLMIAKPDLATSLFILLGAIVVGLISAATAWKARPASLP
Ga0306921_119127301	3300031912	Soil	LALGILYLMIAKPDLTTSLFILLGAIVVGLISAATAWTARPPPLS
Ga0310912_103542541	3300031941	Soil	AKPDLATSLFILLGAIVVGLISAATAWTARPASLS
Ga0310916_107013672	3300031942	Soil	LALGILYLMIAKPDLATSLFILLGAIVVGLISATAWTARPASLP
Ga0310913_100116697	3300031945	Soil	LYVMITKPVLATALFILLGAIVVGLISAVTAWTARPASLP
Ga0310910_114592221	3300031946	Soil	GILYLMIAKPDLATSLFILLGAIVVGLISAATAWKARPASLP
Ga0310909_100818625	3300031947	Soil	LYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLS
Ga0310909_101609901	3300031947	Soil	LIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLTSAARAWTARPASLP
Ga0310909_111969181	3300031947	Soil	RVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWRARPASLP
Ga0306926_109106171	3300031954	Soil	FLLALGILYLMIAKPELATSLFILLGAIVVGLISAATAWTARPASLP
Ga0318530_100311152	3300031959	Soil	LIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATEWTARPASLP
Ga0318530_101322382	3300031959	Soil	GILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0306922_106011291	3300032001	Soil	LIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0318507_104192401	3300032025	Soil	SVQDPVILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASL
Ga0310911_104634801	3300032035	Soil	RVRFLLALGILYLMIAKLDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0318545_100151733	3300032042	Soil	VQDPVILTLIRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0318506_103907091	3300032052	Soil	IRVRFLLALGVLYVMITKPVLATALFILLGAIVVGLISAATAWTARPASLP
Ga0306924_100277088	3300032076	Soil	TLIRVRFLLALGVLYVMITKPVLATALFILLGAIVVGLISAATAWTARPASLP
Ga0306924_101731771	3300032076	Soil	ILYLMIAKPDLATSLFILLGAIVVGLTSAARAWTARPASLP
Ga0306924_125431651	3300032076	Soil	ILYLMIAKPDLATSLFILLGAIVVGLISAATAWTARPASLP
Ga0306920_1000104421	3300032261	Soil	IRVRFLLALGILYLMIAKPDLATSLFILLGAIVVGLISAATAWKARPASLP
Ga0306920_1012623741	3300032261	Soil	LGILYLMIAKPDLATSLFILVGAIVVGLISAATAWTARPASLP
Ga0310914_100762344	3300033289	Soil	RVRFLLALGVLYVMITKPVLATALFILLGAIVVGLISAATAWTARPASLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091145

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences