Metagenome Family F090927

Overview

Basic Information

• Family ID: F090927
• Family Type: Metagenome
• Number of Sequences: 108
• Average Sequence Length: 41 residues
• Representative Sequence: MDSALLQNLMAGAGSSSQFIGGLVVALLYAVIGLLSAIGSI
• Number of Associated Samples: 85
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 93.52 %
• % of genes near scaffold ends (potentially truncated): 97.22 %
• % of genes from short scaffolds (< 2000 bps): 96.30 %
• Associated GOLD sequencing projects: 79
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (62.963 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.296 % of family members)
• Environment Ontology (ENVO): Unclassified (40.741 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (62.037 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 53.62%
  β-sheet: 0.00%
  Coil/Unstructured: 46.38%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF04392	ABC_sub_bind	10.19
PF05694	SBP56	2.78
PF06823	DUF1236	2.78
PF04752	ChaC	1.85
PF14534	DUF4440	1.85
PF03625	DUF302	0.93
PF08484	Methyltransf_14	0.93
PF13417	GST_N_3	0.93
PF02518	HATPase_c	0.93
PF13649	Methyltransf_25	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	10.19
COG3703	Gamma-glutamylcyclotransferase ChaC2 (glutathione degradation)	Inorganic ion transport and metabolism [P]	1.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.93
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.93
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.93
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.93
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.93
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.93
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.93
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.96 %
Unclassified	root	N/A	37.04 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.96 %
Unclassified	root	N/A	37.04 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.96 %
Unclassified	root	N/A	37.04 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.85 %
Unclassified	root	N/A	37.04 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Unclassified	root	N/A	37.04 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.59 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.93 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.70 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %
Unclassified	root	N/A	37.04 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.70 %

Level 7

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.33 %
Halomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae	0.93 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.85 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.93 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.93 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.70 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %
Unclassified	root	N/A	37.04 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.33 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	0.93 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.93 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.93 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.70 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.93 %
Unclassified	root	N/A	37.04 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.93 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.93 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.93 %
Halomonas qijiaojingensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas qijiaojingensis	0.93 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.93 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.70 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.93 %
Unclassified	root	N/A	37.04 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.78 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.93 %

Level 10

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.93 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	2.78 %
Halomonas qijiaojingensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas qijiaojingensis	0.93 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.93 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.70 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.93 %
Unclassified	root	N/A	37.04 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2189573004|GZGWRS402I1Z1E	Not Available	503
3300000033|ICChiseqgaiiDRAFT_c0603484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972
3300000443|F12B_12768773	Not Available	599
3300000597|AF_2010_repII_A1DRAFT_10168399	Not Available	522
3300000789|JGI1027J11758_13022137	Not Available	632
3300000955|JGI1027J12803_103617535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	749
3300000955|JGI1027J12803_105890950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	619
3300004480|Ga0062592_102135147	Not Available	556
3300004643|Ga0062591_101705653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639
3300005328|Ga0070676_10878228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	666

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.30%
Host-Associated	Host-Associated	3.70%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.78%
Plants	Host-Associated → Plants	3.70%
Terrestrial	Environmental → Terrestrial	93.52%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Marine	Environmental → Aquatic → Marine	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.78%
Sediment	Environmental → Aquatic → Sediment	0.93%
Soil	Environmental → Terrestrial → Soil	93.52%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.93%
Loam	Environmental → Terrestrial → Soil → Loam	17.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_08450160	2189573004	Grass Soil	MDSALLRNLMAGAGSSSQFTGGLVVALLYLVIGLVV
ICChiseqgaiiDRAFT_06034842	3300000033	Soil	VESALLKNLMTGAGSSGQFIGGVVVTLLYAVIGLL
F12B_127687731	3300000443	Soil	MDSALLQNLLTGAASSSQFIGGXXXXMLYAVIGLLGAIGSIVVFRR
AF_2010_repII_A1DRAFT_101683991	3300000597	Forest Soil	MNSALLQDLMAGAGSSSRFIGGLVVALLYAVIGLLSAIGSIV
JGI1027J11758_130221371	3300000789	Soil	MRTTLLQNLMAGTGSTSQLVGGFVVALLYAVVGLLSAIGSILVF
JGI1027J12803_1036175353	3300000955	Soil	MDAALLKNLLAGAGSTSQFVGGLIIALLYVVVGLL
JGI1027J12803_1058909501	3300000955	Soil	MDTALLQNLVAGAGSSSQFIGGLVVAVLYAVVGLLGAIGSIVVFRR
Ga0062592_1021351471	3300004480	Soil	MDGALLQNLFAGAGSTSQLVGGLIIALLYVVVGLLGAIGSILV
Ga0062591_1017056532	3300004643	Soil	MDSALLQNLMAGAGSSSQFIGGLIVALLYVVIGLLGAIGSIVVFRRI
Ga0070676_108782281	3300005328	Miscanthus Rhizosphere	MGSALLQNLTAGAGSSSQFIGGLIVALLYVVIGLLGAIGSIVVFRR
Ga0070690_1016333381	3300005330	Switchgrass Rhizosphere	MDSALLQNLIAGAGSSSQFIGGLVVALLYVVIGLLGAIGSIV
Ga0066388_1031453381	3300005332	Tropical Forest Soil	MKDVGAMKMESALLKNLLTGAGSSSQFIGGLVVALLYVVIGLLGAIG
Ga0066388_1069026341	3300005332	Tropical Forest Soil	LGTALLHNLIAGAGSSSQFVGGLVVAVLYAVVGLLGAIGSILVF
Ga0066388_1077610961	3300005332	Tropical Forest Soil	MESALLKNLLTGAGSSSQFIGGLVVALLYVVIGLLGAIGSIL
Ga0066388_1083718892	3300005332	Tropical Forest Soil	MDSALLKNLVTGAGSSSQFFGGLVVALLYVVIGVLGAIGSILVFR
Ga0070713_1023763321	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNSALLQNLMAGAGSSSQFVGGLVVALLYVVIGLLSAIGSIA
Ga0070686_1015911192	3300005544	Switchgrass Rhizosphere	MDSALLQNLIAGAGSSSQFIGGLVVALLYVVIGLLGAIGSIVVFRRI
Ga0070693_1013522971	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MDSALLQNLIAGAGSSSQFIGGLVVALLYVVIGLLGAIGSIVVFRR
Ga0066905_1022262153	3300005713	Tropical Forest Soil	LDSALLHNLIAGAGSSSQFVGGLVVAVLYAVVGLLGAIGSILVF
Ga0066903_1006010261	3300005764	Tropical Forest Soil	MDSALLQNLISGAGSNGQFIGGLVVAMLYVVIGLLG
Ga0066903_1053746412	3300005764	Tropical Forest Soil	MRATLLQSLTAGTGSASQLVGGLFVALLYAVVGLLS
Ga0066903_1066537712	3300005764	Tropical Forest Soil	MDSALLQSLMAGAGSSSRFIGGLVVALLYAVIGLLSAIGSIVVFRRI
Ga0066903_1066941111	3300005764	Tropical Forest Soil	MDSALLKNLVTGAGSSSQFVGGLVVALLYAVIGVLGAIGSILVFR
Ga0070715_103259251	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDSALLQNLIAGAGSSSQFIGRLVVALLYVVIGLL
Ga0075435_1008541922	3300007076	Populus Rhizosphere	MDSALLQNLIAGAGSSSQLIGGLVVALLYFVIGLLG
Ga0115863_18165783	3300009034	Sediment, Intertidal	MNAALLQNLIAGAESSSQFIGGLVVLVLYAVVGLLGASMLRSA*
Ga0126374_109027741	3300009792	Tropical Forest Soil	MDSALLQNLMAGAGSSGRFIGGLVVALLYAVIGLLSAIGSIVVF
Ga0126374_110918001	3300009792	Tropical Forest Soil	MDSALLKNLVTGAGSSSQFIGGLVVALLYLVIGVLGAIGSIIVFR
Ga0126384_102193231	3300010046	Tropical Forest Soil	MNSALLQNLITGAGSSSQFIGGLVVAVLYVVIGLLSAIGSILIF
Ga0126384_105066982	3300010046	Tropical Forest Soil	MNSALLQNLVAGAGSSSQLIGGLIVAVLYAVIGVLGATGSIL
Ga0126382_107961802	3300010047	Tropical Forest Soil	MDSALLQNLMTGAGSSSQFIGGLVVALLYAVIGLLSAIGSIVV
Ga0126382_114125991	3300010047	Tropical Forest Soil	LEQKLGSALLHNLIAGAGSSSQFVGGLVVAVLYAVIG
Ga0126370_125730091	3300010358	Tropical Forest Soil	MDSTLLRNLTTGAGSSGQFIGGLVVALLYVVIGVLAAIGSILVF
Ga0126376_120257742	3300010359	Tropical Forest Soil	MESALLKNLLTGAGSGSQFIGGLVVVLLYVVIGLLGAIG
Ga0126379_106360232	3300010366	Tropical Forest Soil	LEQKLDSALLHNLIIGAGSSSQFVGGLVVAVLYAVIGLLGAI
Ga0134128_128821371	3300010373	Terrestrial Soil	MQNLMTGTGSSSQLVGGFVVGMLYAVIGLLSAIGSIVV
Ga0126381_1030630251	3300010376	Tropical Forest Soil	MDSPLLKNLVAGAGSSSQFIGGLVVAMLYAVIGVLGAVGSILVFRRI
Ga0126383_129609442	3300010398	Tropical Forest Soil	MNSALLQNLAAGAGSSSQFIGGLVVALLYVVIGLLSAIGSILIFRRI
Ga0137387_112031662	3300012349	Vadose Zone Soil	MNSALLQNLMAGAGSSSQFVGGLVVALLYVVIGLL
Ga0126375_107148001	3300012948	Tropical Forest Soil	MDSALLQNLIAGAGSSSQLIGGLVVALLYFVVGLLSAI
Ga0126369_122921182	3300012971	Tropical Forest Soil	MDSALLQNLMAGAGSSSRFIGGLVVALLYAVIGLLSAIGSIVVFRR
Ga0164305_118011642	3300012989	Soil	MDSALLENLVTGAGSTSQFIGGLVIAFLYGVVGLLGA
Ga0173478_106211711	3300015201	Soil	MDSALLQNLMAGAGSSSQFIGGLIVALLYVVIGLL
Ga0132256_1025556342	3300015372	Arabidopsis Rhizosphere	MGATKMNSALLQNLMAGAGSSSQFIGGLVVALLYVVIGLLSAIG
Ga0182041_103222681	3300016294	Soil	MNSALLQNLVAGAGSSSQFIGGLVVALLYLVVGLLGAIGSILVFRRI
Ga0182032_105337732	3300016357	Soil	MNSTLLQNLIVDAESSSQFVGGLVIALLYVVIGLLSAIG
Ga0182034_100575941	3300016371	Soil	MNSTLLQSLIADAESSSQFVGGLVIALLYVVIGLLSAIGISYFSANL
Ga0182034_103158242	3300016371	Soil	MNSALLQNLMAGAESSSQFIGGLVVALLYVVIGLLSAIGSIAV
Ga0182040_101241761	3300016387	Soil	MDSGLLHNLLTGTGSSTQLTGGIVVALLYAVIGLLGAVGSILVVRRM
Ga0182040_116885391	3300016387	Soil	MHSTGSTLLQNLIAGTGSNGQFVGGLVVALLYLVIGLLGA
Ga0182039_108498901	3300016422	Soil	LDSALLHNLIAGAGSSSHFIGGLVVAVLYAVIGLLGAIGSI
Ga0182038_109563201	3300016445	Soil	MDTALLQNLISGAGSTSRLIGGLVVAMLYLVIGLLGAIGSILVFR
Ga0182038_114696962	3300016445	Soil	MNSALLQNLMAGAGSSSQFIGGLVVALLYVVIGLLSA
Ga0163161_103673431	3300017792	Switchgrass Rhizosphere	VRAALMQNLMTGTGSSSQLVGGFVVGMLYAVIGLLSAIGS
Ga0066655_107221591	3300018431	Grasslands Soil	MDSALLQNLLAGAGSSSQFMGGVVVAQSTVVAGLPR
Ga0173481_104417652	3300019356	Soil	MDSALLQNLMAGAGSSSQFIGGLIVALLYVVIGLLGA
Ga0193728_12073892	3300019890	Soil	MDSALLHSLIAGAGSSSKFIGGLIVAMLYAVIGLLSATGSILVF
Ga0126371_115360861	3300021560	Tropical Forest Soil	MDSALLQSLMAGAGSSSRFIGGLVVALLYAVIGLLSAI
Ga0126371_121311002	3300021560	Tropical Forest Soil	MMDSGLLHNLLTGTGSSIQLIGGIVVALLYTVIGLLGAVGSI
Ga0209761_12277441	3300026313	Grasslands Soil	MNSALLQNLMAGAGSSSQFIGGLVVALLYVVIGLLSAIGSILIFR
Ga0207862_10086587	3300027703	Tropical Forest Soil	MDSALLKNLVTGSGSSSQFIGGLVVALLYVVIGVLGAIGSILVF
Ga0209819_102614531	3300027722	Freshwater Sediment	VRAALMQNLMTGTGSSSQLVGGFVVGMLYAVIGLLSA
Ga0209465_102029121	3300027874	Tropical Forest Soil	MKMESALLKNLLTGAGSSSQFIGGLVVALLYVVIGLLGA
Ga0209465_102588811	3300027874	Tropical Forest Soil	LEQKLGSALLHNLIAGAGSSSQFVGGLVVAVLYAVIGSLGAIGSILVFRR
Ga0209488_102052613	3300027903	Vadose Zone Soil	MDSALLKHLMAGAGSSSQFVGGLIVALLYVVIGLLSAIGSIV
Ga0209069_110269372	3300027915	Watersheds	MDSALLQNLIAGAGSSSQFVGGLVVALLYVVIGLLSAIGSILIF
Ga0209526_106899401	3300028047	Forest Soil	MDSALLRNLMTGAGSSSQFIGGLVVALLYVVIGLLSSIGSILIFRRI
Ga0307317_101530812	3300028720	Soil	MEKALLQNLMAGAGSSSQFVGGLTVALLYVVIGLLSGIGSILIF
Ga0307284_102716702	3300028799	Soil	MEKALLQNLMAGAGSSSQFVGGLTVALLYVVIGLLSGIGSILIFR
Ga0299907_110249852	3300030006	Soil	MNAALLQNLVAGAGSSSQLIGGLVVALLYAVIGLLGAIGS
Ga0318516_107974981	3300031543	Soil	MVNTALLKNLVTGAGSTSQLIGGLVVAMLYAVVGVLGAIGS
Ga0318496_102061984	3300031713	Soil	MDSALLQNLIAGAGSGSRLIGGLVVALLYAVIGLLSAI
Ga0306917_109717651	3300031719	Soil	VDSALLQNLMAGAGSSSQFIGGLIVAVLYVVIGLLSAIGSIL
Ga0306917_112398062	3300031719	Soil	MDSALLKNLVSGAGSSSQFIGGLVVALLYAVVGLLGAIGS
Ga0318554_100718781	3300031765	Soil	MASALLQNLMTGAGSSSRFIGGLVVALLYAVIGLLSAF
Ga0318509_105100301	3300031768	Soil	MESALLRNLVAGAGSSSQFIGGLVIALLYVVVGLLGAIGSILVFRRI
Ga0318566_102391052	3300031779	Soil	MDSALLKNLVTGAGSSSQFVGGLVVALLYVVIGVL
Ga0318529_104514861	3300031792	Soil	LGSALLHNLIAGAGSSSQFIGGLVVAVLYAVIGLLGAIGSILVIVFRRI
Ga0310917_108783651	3300031833	Soil	MGSPLLKNLVAGAGSSSQFIGGLVVAMLYAVIGVLG
Ga0318512_104066263	3300031846	Soil	MDSALLQNLIAGAGSGSRLIGGLVVALLYAVIGLLSA
Ga0306919_100309764	3300031879	Soil	MNSALLQNLMAGAGSSSQFIGGLVVALLYVVIGLLSAI
Ga0306919_114852651	3300031879	Soil	MDSTLLRDLMAGAGSSGQFIGGLVVALLYLVIGVL
Ga0306925_108527891	3300031890	Soil	VDSALLQNLMVGAGSSSQFIGGLIVAMLYAVVGLLAAVG
Ga0306923_111655391	3300031910	Soil	MDSGLLHNLLTGTGSSTQLIGGIVVALLYAVIGLLGA
Ga0306923_118681622	3300031910	Soil	MDSALLQNLVAGTGSSNRFIGGLVIALLYVVIGLLSAI
Ga0306921_111255901	3300031912	Soil	MDSALLKNLVTGAGSSSQFVGGLVVALLYAVIGVLGAIGSIL
Ga0306921_122053361	3300031912	Soil	LDSALLHNLIAGAGSSSQFIGGLVVAVLYTVIGLLGAIGSILVF
Ga0310912_110231002	3300031941	Soil	MNSTLLQSLIAGAESSSQFVGGLVIALLYVVIGLLSAIGSILI
Ga0310916_112251071	3300031942	Soil	MDPALLQNLVAGAGSSSQFIGGLVIALLYMVIGLLSAIG
Ga0310916_116435282	3300031942	Soil	MDSTLLRDLMAGAGSSSQFIGGLVVALLYLVIGVLAAIGS
Ga0310913_102644412	3300031945	Soil	LDSALLHSLITGAGSSSQFIGGLVVAVLYAVIGVL
Ga0310913_103093513	3300031945	Soil	LGSALLHNLIAGAGSSSQFIGGLVVAVLYAVIGLLGAIGSI
Ga0310910_107616412	3300031946	Soil	MDSPLLKNLVAGAGSSSQLIGGLVMAMLYAVIGVLGAVGSILVVRRI
Ga0310909_100326181	3300031947	Soil	MDSPLLKNLVAGAGSSSQLIGGLVMAMLYAVIGVLGAV
Ga0310909_110623361	3300031947	Soil	MDSTLLQNLIAGAGSSSQFVGGLVVALLYTVIGVLGATGSILVFR
Ga0310909_113363202	3300031947	Soil	LDSALLHNLIAGAGSSSQFIGGLVVAVFYTVIGLL
Ga0318530_104902791	3300031959	Soil	MDSGLLQNLMAGAGSSSRFIGGLVVALLYAVIGLLSAIGSIVV
Ga0306922_121726422	3300032001	Soil	MASGLLHNLLTGAGSSSRLIGGMVVVLLYAVIGLLAAVGSILV
Ga0310902_110395861	3300032012	Soil	VRAALMQNLMTGTGSSSQLVGGFVVGMLYAVIGLLSAIGSIVV
Ga0318558_106381342	3300032044	Soil	MESALLRNLVAGAGSSSQFIGGLAIALLYVVIGLLG
Ga0318533_108911062	3300032059	Soil	MDSPLLKNLVAGAGSSSQFIGGLVVAMLYAVIGVLGAVGSILVFR
Ga0306924_103206201	3300032076	Soil	MQTGLGEATGMDSALLKNLMTGSGSSSQFIGGLVVALLYVVIG
Ga0318518_103331942	3300032090	Soil	MDSALLKNLVTGAGSSSQFVGGLVVALLYAVIGVLGA
Ga0307471_1004893512	3300032180	Hardwood Forest Soil	MESALLKNLLSGAGSSSQFIGGVIVTLLYAVIVLLSAI
Ga0306920_1019711831	3300032261	Soil	MDSTLLRNLTTGAGSSGQFIGGLVVALLYAVIGVLG
Ga0335081_107000233	3300032892	Soil	MEKALLQNLMAGAGSSSQFIGGLIVALLYAVIGLLSAIGSI
Ga0310914_106297151	3300033289	Soil	VDSALLQNLMVGAGSSSQFIGGLIVAMLYAVVGLLAAVGSIVV
Ga0318519_101995983	3300033290	Soil	MDSALLQNLMAGAGSSSQFIGGLVVALLYAVIGLLSAIGSI