Metagenome Family F090879

Basic Information
Family ID	F090879
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	48 residues
Representative Sequence	MEQLDTLTLNQSEESTDFSLHDHYTERIKYHMTMLNYYLKEEKNDRMGN
Number of Associated Samples	87
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	15.74 %
% of genes from short scaffolds (< 2000 bps)	67.59 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (36.111 % of family members)
Environment Ontology (ENVO)	Unclassified (74.074 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (81.481 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48. 1DelMOSum2011_1000162710 2DelMOWin2010_100030173 3LPaug09P1610mDRAFT_100001416 4LPaug08P2610mDRAFT_10110572 5LPaug08P2610mDRAFT_10245704 6NpDRAFT_102294902 7JGI24004J15324_100369703 8JGI24004J15324_100892835 9JGI24005J15628_101545101 10GOS2221_10060193 11Ga0055584_1008820452 12Ga0066224_10142181 13Ga0073579_119051763 14Ga0070723_102777413 15Ga0075466_10174865 16Ga0075441_101096153 17Ga0075443_101293323 18Ga0098038_11175332 19Ga0098037_11013372 20Ga0098042_10474975 21Ga0098048_10040539 22Ga0070748_11100845 23Ga0099849_12075535 24Ga0102855_100029110 25Ga0105744_10110473 26Ga0105748_100794623 27Ga0114995_100914933 28Ga0114995_107251981 29Ga0114996_100777705 30Ga0114996_106148652 31Ga0114993_108432104 32Ga0114994_102402735 33Ga0115548_10448853 34Ga0115005_103114682 35Ga0115003_100414952 36Ga0115004_102929915 37Ga0115004_105427854 38Ga0115012_1000685313 39Ga0118731_1065528613 40Ga0114934_100140219 41Ga0163179_1000155041 42Ga0164313_104614433 43Ga0164318_109991191 44Ga0181377_10514492 45Ga0181412_10671301 46Ga0181412_11369501 47Ga0181388_10382183 48Ga0181381_11112092 49Ga0181431_10084473 50Ga0181418_10136365 51Ga0181399_10095276 52Ga0181405_10129785 53Ga0181422_10700671 54Ga0181422_10860623 55Ga0181422_11276445 56Ga0181380_12725871 57Ga0206125_101797173 58Ga0211510_10520363 59Ga0211689_10995924 60Ga0211682_101593952 61Ga0211521_103330392 62Ga0211576_100159247 63Ga0211576_100427728 64Ga0213869_100319013 65Ga0196889_10149005 66Ga0196887_10560563 67Ga0224506_1000375710 68Ga0233404_100120735 69Ga0233432_100511211 70Ga0244777_100468457 71Ga0244776_1000264311 72Ga0244776_100421977 73Ga0255048_102996291 74Ga0255046_105964191 75Ga0207896_100135010 76Ga0207896_10026335 77Ga0207896_10359491 78Ga0208792_10454401 79Ga0208157_10747902 80Ga0209535_10116069 81Ga0209535_10670383 82Ga0209535_11621012 83Ga0209336_100636871 84Ga0209336_101520814 85Ga0209336_101947891 86Ga0209634_10149999 87Ga0209634_10950755 88Ga0209337_11429366 89Ga0208032_11054243 90Ga0209532_10570302 91Ga0209482_100069825 92Ga0209090_100177598 93Ga0209271_102318623 94Ga0209503_101839931 95Ga0209404_100824182 96Ga0209404_101854935 97Ga0209404_105094244 98Ga0183755_100242512 99Ga0308025_10283455 100Ga0308025_10535215 101Ga0307489_100964515 102Ga0307489_101857653 103Ga0307993_10514174 104Ga0302135_100049314 105Ga0307377_106739784 106Ga0308011_101174635 107Ga0315322_1000438312 108Ga0314858_120133_406_555
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48. 1DelMOSum2011_1000162710 2DelMOWin2010_100030173 3JGI24004J15324_100369703 4Ga0098038_11175332 5Ga0114996_100777705 6Ga0244777_100468457 7Ga0209337_11429366 8Ga0308025_10283455 9Ga0315322_1000438312
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48. 1Ga0181405_10129785 2DelMOSum2011_1000162710 3DelMOWin2010_100030173 4LPaug08P2610mDRAFT_10110572 5NpDRAFT_102294902 6JGI24004J15324_100892835 7GOS2221_10060193 8Ga0098037_11013372 9Ga0098048_10040539 10Ga0114995_100914933 11Ga0114995_107251981 12Ga0114996_100777705 13Ga0115004_102929915 14Ga0114934_100140219 15Ga0181431_10084473 16Ga0181418_10136365 17Ga0181399_10095276 18Ga0211689_10995924 19Ga0211682_101593952 20Ga0244776_100421977 21Ga0209404_101854935 22Ga0209404_105094244 23Ga0307993_10514174 24Ga0307377_106739784
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.45% β-sheet: 0.00% Coil/Unstructured: 54.55%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00268	Ribonuc_red_sm	27.78
PF06356	DUF1064	25.00
PF02867	Ribonuc_red_lgC	6.48
PF03819	MazG	3.70
PF00303	Thymidylat_synt	2.78
PF10544	T5orf172	1.85
PF04404	ERF	1.85
PF13155	Toprim_2	0.93
PF01068	DNA_ligase_A_M	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	27.78
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	6.48
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	2.78
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.93
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	33.33 %
Unclassified	root	N/A	66.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	10.19 %
Unclassified	root	N/A	66.67 %
Viruses	superkingdom	All Organisms → Viruses	23.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.19 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	9.26 %
Unclassified	root	N/A	66.67 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	6.48 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.26 %
Unclassified	root	N/A	66.67 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	6.48 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	9.26 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.33 %
Unclassified	root	N/A	66.67 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	6.48 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.93 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	9.26 %

Name	Rank	Taxonomy	Distribution
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	6.48 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	0.93 %
Unclassified	root	N/A	66.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.41 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	9.26 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	6.48 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
Unclassified	root	N/A	66.67 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	0.93 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	9.26 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	6.48 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
Rickettsiales bacterium TMED211	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED211	0.93 %
Unclassified	root	N/A	66.67 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	9.26 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300022913\|Ga0233404_10012073	All Organisms → Viruses	1958	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10051121	Not Available	2605	Open in IMG/M
(restricted) 3300024518\|Ga0255048_10299629	Not Available	780	Open in IMG/M
(restricted) 3300024519\|Ga0255046_10596419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300000115\|DelMOSum2011_c10001627	Not Available	14774	Open in IMG/M
3300000117\|DelMOWin2010_c10003017	Not Available	10585	Open in IMG/M
3300000149\|LPaug09P1610mDRAFT_c1000014	Not Available	34641	Open in IMG/M
3300000159\|LPaug08P2610mDRAFT_c1011057	Not Available	1102	Open in IMG/M
3300000159\|LPaug08P2610mDRAFT_c1024570	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	623	Open in IMG/M
3300000929\|NpDRAFT_10229490	Not Available	884	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.07%
Terrestrial	Environmental → Terrestrial	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.07%
Soil	Environmental → Terrestrial → Soil	0.93%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	0.93%
Coastal	Environmental → Aquatic → Marine → Coastal	13.89%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.85%
Inlet	Environmental → Aquatic → Marine → Inlet	2.78%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.56%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.63%
Oceanic	Environmental → Aquatic → Marine → Oceanic	41.67%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.85%
Sediment	Environmental → Aquatic → Marine → Sediment	0.93%
Strait	Environmental → Aquatic → Marine → Strait	12.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.96%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.93%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.70%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.78%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.78%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.85%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	38.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.96%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	12.04%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	11.11%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.63%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.63%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.93%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.93%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.70%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.85%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.93%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	36.11%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.26%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	2.78%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.85%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	1.85%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.85%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.85%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.93%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.85%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.93%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	12.04%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.78%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.93%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.93%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.93%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.93%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.93%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000149	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 10m	Environmental	Open in IMG/M
3300000159	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 10m	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001938	Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_1000162710	3300000115	Marine	MNQLDTETSTQLEESTDFTLHEHHKERIIFHMRMLNHYLKEQKNDRMGN*
DelMOWin2010_100030173	3300000117	Marine	MEQLDTLTLSQSEESMDFSLRDHHTERIKHHMTMLNYYLKEQKNDRMGD*
LPaug09P1610mDRAFT_100001416	3300000149	Marine	MEQLNTLTLSQSEESMDFSLHDHYTERIKYHMTMLNYYLKEEKHDRMGD*
LPaug08P2610mDRAFT_10110572	3300000159	Marine	MDQLDTQTSIELEESTDFTLHEHHKERISFHMRMLNHYLKEQKNDRMGT*
LPaug08P2610mDRAFT_10245704	3300000159	Marine	MEQLNTLTLNRSEENTDFSLHDHYNERVKHHMIMLNYYLKEQKNDRMGN*
NpDRAFT_102294902	3300000929	Freshwater And Marine	MNQSDTETSTQSEESTDFTLRDHYNERISFHMRMLNHYLKEQKNDRMGT*
JGI24004J15324_100369703	3300001472	Marine	MNQSNTETSTQLEENMGFTLYDHYKERIKHHMKMLNYYLKEXKNDRLGT*
JGI24004J15324_100892835	3300001472	Marine	MEQSNTLTLNRSEENTDFSLHDHYNERVKHHMIMLNYYLKEQKNDRMGN*
JGI24005J15628_101545101	3300001589	Marine	QLDTQTSIELEESTDFTLHEHHKERISFHMRMLNHYLKEQKNDRMGT*
GOS2221_10060193	3300001938	Marine	MNQSDTETSTQLEENMGFTLYDHHKERIKHHMKMLNYYLKEQENDRLGT*
Ga0055584_1008820452	3300004097	Pelagic Marine	MEQLDTLTLSQSEESMDFLLHDHHAERIKHHMTMLNYYLKEQKNDRMGD*
Ga0066224_10142181	3300004457	Marine	MDQLDTQTSTELEESTDFTLRDHYKERISFHMRMLNHYLKEQKNDRMGT*
Ga0073579_119051763	3300005239	Marine	MEQLDTLTLNQSEENMDFSLHDHYAERIKYHMTMLNYYLKEEKNDRMGN*
Ga0070723_102777413	3300005612	Marine Sediment	MDQLDTQTSTELEESTDFTLRDHYEERISFHMRMLNHYLKEQKNDRMGT*
Ga0075466_10174865	3300006029	Aqueous	MEQLDTLTLSQSEESMDFSLRDHHAERIKHHMTMLNYYLKEQKNDRMGD*
Ga0075441_101096153	3300006164	Marine	MEQLNTQTSNLLEENMDFTLRDHHEERIRHHMKMLNYYLKEQKNDRMGD*
Ga0075443_101293323	3300006165	Marine	MEQLDTQTSNLLEENMDFTLRDHHEERVKHHMKMLNYYLKEQKNDRMGD*
Ga0098038_11175332	3300006735	Marine	MDQSDILTSNLSEESTDFTLRDHYKERIKFHMTMLNYYLKEQKNDGMGN*
Ga0098037_11013372	3300006737	Marine	MDQSGMVTSNLSETNTDFTLREHYAERIKFHMNMLNYYLNEQTNDRMGN*
Ga0098042_10474975	3300006749	Marine	MDQSGMGTSNLSETNTDFTLREHYAERIKFHMNMLNYYLNEQTNDRMGN*
Ga0098048_10040539	3300006752	Marine	MDQLDTLKLTESEESMDFSLHDHYKERIGYHMKMLNYYLKEEKNDRMGN*
Ga0070748_11100845	3300006920	Aqueous	MEQLDTLTLSQSEESMDFSLRDHHTERIKYHMTMLNYYLKEQKNDRMGD*
Ga0099849_12075535	3300007539	Aqueous	LTLSQSEESMDFSLRDHHTERIKYHMTMLNYYLKEQKNDRMGD*
Ga0102855_100029110	3300007647	Estuarine	MNQSDTETSTQLEESTDFTLRDHYNERISFHMRMLNHYLKEQKNDRMGT*
Ga0105744_10110473	3300007863	Estuary Water	MNQSDTETSTQSEESTDFTLRNHYNERISFHMRMLNHYLKEQKNDRMGT*
Ga0105748_100794623	3300007992	Estuary Water	MNQSDTETLTQSEESTDFTLRDHYNERISFHMRMLNHYLKEQKNDRMGT*
Ga0114995_100914933	3300009172	Marine	MNQLDIETSTQLEESTDFTLREHHEERISFHMQMLNHYLKEQKNDRMGN*
Ga0114995_107251981	3300009172	Marine	MNQLDIETSTQLEESTDFTLRDHHKERVSFHMRMLNHYLKEQKNDRMGT*
Ga0114996_100777705	3300009173	Marine	MEQLYTEPSTILEENMDFSLHKHHKERVEYHMKMLNYYLKEEYNDRLGN*
Ga0114996_106148652	3300009173	Marine	MNQLDTETSTQLEESTDFTLRDHYKERVSFHMRMLNHYLKEQKNDRMGT*
Ga0114993_108432104	3300009409	Marine	MNQLDTETSTQLEESTDFTLRDHYKERVSFHMIMLNHYLKEQKNERMGT*
Ga0114994_102402735	3300009420	Marine	MNQLDTETSTQLEESTDFTLREHHEERISFHMQMLNHYLKEQKNDRMGN*
Ga0115548_10448853	3300009423	Pelagic Marine	MEQLDTLTLSQSEESMDFLLRDHHAERIKHHMTMLNYYLKEQKNDRMGD*
Ga0115005_103114682	3300009432	Marine	MNQLDTETSTQLEESTDFTLRDHYKERVSFHMRMLNHYLKEQKNDRMGN*
Ga0115003_100414952	3300009512	Marine	MNQSNTETSTQLEENMGFTLYDHYKERIKHHMKMLNYYLKEQKNDRLGT*
Ga0115004_102929915	3300009526	Marine	MDQLDTQTSTELEESTDFTLRDHYKERVSFHMRMLNHYLKEQKNERMGT*
Ga0115004_105427854	3300009526	Marine	DQLDTQTSTELEESTDFTLRDHYKERVNFHMRMLNHYLKEQKNDRMGT*
Ga0115012_1000685313	3300009790	Marine	MDQSDILTSNLSETNTDFTLREHYNERIKFHMTMLNYYLKEQKNDRMGN*
Ga0118731_1065528613	3300010392	Marine	MDQLDTQTSIKLEESTDFTLHEHHKERISFHMRMLNHYLKEQKNDRMGT*
Ga0114934_100140219	3300011013	Deep Subsurface	MEQSDILILNQSEESMDFSLHDHYAERIRYHMTMLNYYLKEEKNDRMGD*
Ga0163179_1000155041	3300012953	Seawater	MEQLDTLTLSQSEESMDFSLRDHHIERIKHHMTMLNYYLKEQKNDRMGD*
Ga0164313_104614433	3300013101	Marine Sediment	MDQSDILTSNLSETNTDFTLREHYAERIKFHMTMLNYYLKEQKNDRMGN*
Ga0164318_109991191	3300013103	Marine Sediment	MDQSGMVTSNLSETNTDFTLREHYAERIKFHMTMLNYYLKEQKNDRMGN*
Ga0181377_10514492	3300017706	Marine	MDQLDTLTLSQSEESMDFSLHDHYTERIKYHMTMLNYYLKEEKHDRMGD
Ga0181412_10671301	3300017714	Seawater	MEQLNTLTLNQSEENMDFSLHDHYTERIKYHMTMLNYYLKEEKNDRMGN
Ga0181412_11369501	3300017714	Seawater	MEQLDTLTLNQSEENMDFSLHDHYTERIKHHMTMLNYYLKEEKNDRMGN
Ga0181388_10382183	3300017724	Seawater	MEQLDTLTLNQSEESTDFSLHDHYTERIKYHMTMLNYYLKEEKK
Ga0181381_11112092	3300017726	Seawater	MEQLDTLTLSQSEESMDFSLHDHYTERIKYHMTMLNYYLKEEKHDRMGD
Ga0181431_10084473	3300017735	Seawater	MDQSDILTLNLSETNTDFTLREHYAERIKFHMTMLNYYLKEQKNDRMGN
Ga0181418_10136365	3300017740	Seawater	MDQSDILTSNLSEESTDFTLRDHYKERIKFHMTMLNYYLKEQKNDRMGN
Ga0181399_10095276	3300017742	Seawater	MEQLDTLTLNQSEENTDFLLRDHYAERIKYHMTMLNYYLKEEKHDRMGD
Ga0181405_10129785	3300017750	Seawater	MEQLDTLTLNQSEESTDFSLHDHYTERIKYHMTMLNYYLKEEKNDRMGN
Ga0181422_10700671	3300017762	Seawater	QLDTLTLNQSEENMDFSLHDHYTERIKYHMTMLNYYLKEEKNDRMGN
Ga0181422_10860623	3300017762	Seawater	MEQLDTLTLNQSEENMDFSLHDHYTERIKYHMTMLNYYLKEEK
Ga0181422_11276445	3300017762	Seawater	QLDTLTLNQSEENMDFSLHDHYTERIKYHMTMLNYYLKEEKHDRMGD
Ga0181380_12725871	3300017782	Seawater	MEQLDTLTLNQSEESTDFLLRDHYAERIKYHMTMLNYYLKEEKNDRMGN
Ga0206125_101797173	3300020165	Seawater	MEQLDTLTLSQSEESMDFLLRDHHAERIKHHMTMLNYYLKEQKNDRMGD
Ga0211510_10520363	3300020336	Marine	MEQLDTLTLNQSEENMDFSLHDHYAERIKYHMTMLNYYLKEEKNDRMGN
Ga0211689_10995924	3300020358	Marine	MEQSNTLTLNRSEENTDFLLRDHYTERIKHHMTMLNYYLKEEKHDRMGN
Ga0211682_101593952	3300020376	Marine	MEQLDTQTSNLLEENMDFTLRDHHEERVKHHMKMLNYYLKEQKNDRMGD
Ga0211521_103330392	3300020428	Marine	MEQLDTLTLNQSEENMDFSLHDHYAERIKYHMTMLNYYLKEEKNDRMG
Ga0211576_100159247	3300020438	Marine	MNQSDTETSTQSEESTDFTLRDHYNERISFHMRMLNHYLKEQKNDRMGT
Ga0211576_100427728	3300020438	Marine	MEQLDTLTLNQSEENMDFSLHDHYTERIKYHMTMLNYYLKEEKNDRMGN
Ga0213869_100319013	3300021375	Seawater	MEQLDTLTLSQSEESMDFSLRDHHTERIKHHMTMLNYYLKEQKNDRMGD
Ga0196889_10149005	3300022072	Aqueous	MEQLDTLTLSQSEESMDFSLRDHHTERIKYHMTMLNYYLKEQKNDRMGD
Ga0196887_10560563	3300022178	Aqueous	MEQLDTLTLSQSEESMDFSLRDHHAERIKHHMTMLNYYLKEQKNDRMGD
Ga0224506_1000375710	3300022221	Sediment	MDQLDTQTSTELEESTDFTLRDHYKERISFHMRMLNHYLKEQKNDRMGT
(restricted) Ga0233404_100120735	3300022913	Seawater	MDQLDTQTSTELEESTDFTLRDHHKERISFHMRMLNYYLKEQKNDRMGT
(restricted) Ga0233432_100511211	3300023109	Seawater	MDQLDTQTSTELEESTDFTLRDHHKERISFHMRMLNHYLKEQKNDRMGT
Ga0244777_100468457	3300024343	Estuarine	TSTQLEESTDFTLRDHYNERISFHMRMLNHYLKEQKNDRMGT
Ga0244776_1000264311	3300024348	Estuarine	MNQSDTETSTQLEESTDFTLRDHYNERISFHMRMLNHYLKEQKNDRMGT
Ga0244776_100421977	3300024348	Estuarine	MEQLNTLTLSQSEESMDFSLHDHYTERIKYHMTMLNYYLKEEKHDRMGD
(restricted) Ga0255048_102996291	3300024518	Seawater	MNQSDTETSTQSEESTDFTLRDHYNERISFHMRMLNHYLKEQKNDRM
(restricted) Ga0255046_105964191	3300024519	Seawater	MDQLDTQTSTELEESTDFTLRDHHKERISFHMRMLNYYLKEQKNDRMG
Ga0207896_100135010	3300025071	Marine	MEQSNTLTLNRSEENTDFSLHDHYNERVKHHMIMLNYYLKEQKNDRMGN
Ga0207896_10026335	3300025071	Marine	MDQLDTQTSIELEENTDFTLRDHHKERISFHMRMLNHYLKEQKNDRMGT
Ga0207896_10359491	3300025071	Marine	MDQLDTQTSIELEESTDFTLHEHHKERISFHMRMLNHYLKEQKNDRMGT
Ga0208792_10454401	3300025085	Marine	MDQLDTLKLTESEESMDFSLHDHYKERIGYHMKMLNYYLKEEKNDRMGN
Ga0208157_10747902	3300025086	Marine	MDQSGMVTSNLSETNTDFTLREHYAERIKFHMNMLNYYLNEQTNDRMGN
Ga0209535_10116069	3300025120	Marine	MEQLNTLTLSQSEESMDFSLHDHYTERIKYHMTMLNYYLKEEKNDRMGD
Ga0209535_10670383	3300025120	Marine	MEQLDTLTLSQSEESMDFSLHDHYTERIKYHMTMLNYYLKEEKNDRMGN
Ga0209535_11621012	3300025120	Marine	MNQLDTETSTQSEESTDFTLHEHHKERISFHMRMLNHYLKEQKNDRMGT
Ga0209336_100636871	3300025137	Marine	MEQLNTLTLNQSEENTDFLLRDHYAERIKYHMTMLNYYLKEEKNDRMGN
Ga0209336_101520814	3300025137	Marine	TQLEENMGFTLYDHYKERIKHHMKMLNYYLKEQKNDRLGT
Ga0209336_101947891	3300025137	Marine	MNQSNTETSTQLEENMGFTLYDHYKERIKHHMKMLNYYLKE
Ga0209634_10149999	3300025138	Marine	MEQLNTLTLNRSEENTDFSLHDHYNERVKHHMIMLNYYLKEQKNDRMGN
Ga0209634_10950755	3300025138	Marine	MEQLDTLTLNQSEESTDFSLHDHYTERIKYHMTMLNYYLKEEKHDRMGD
Ga0209337_11429366	3300025168	Marine	LTLNQSEENTDFLLRDHYAERIKYHMTMLNYYLKEEKNDRMGN
Ga0208032_11054243	3300025266	Deep Ocean	MEQLNTQTSNLLEENMDFTLRDHHEERVKHHMKMLNYYLKEQKNDRMGD
Ga0209532_10570302	3300025696	Pelagic Marine	MEQLDTLTLSQSEESMDFLLRDHHAERIKHHMTMLNYYLKEQKNDWMGD
Ga0209482_100069825	3300027668	Marine	MEQLNTQTSNLLEENMDFTLRDHHEERIRHHMKMLNYYLKEQKNDRMGD
Ga0209090_100177598	3300027813	Marine	MDQLDTQTSTELEESTDFTLRDHYKERVSFHMRMLNHYLKEQKNERMGT
Ga0209271_102318623	3300027845	Marine Sediment	MDQLDTQTSTELEESTDFTLRDHYEERISFHMRMLNHYLKEQKNDRMGT
Ga0209503_101839931	3300027859	Marine	MDQSDILTSNLSETNTDFTLREHYNERIKFHMTMLNYYLKEQKNDRMGN
Ga0209404_100824182	3300027906	Marine	MDQSDMMTSNLSETSTDFTLREHYAERIKFHMNMLNYYLNEQTDDRMGN
Ga0209404_101854935	3300027906	Marine	MEQSDTLTSNLSETNTDFTLREHYNERIKFHMAMLNYYLKEQKNDRMGN
Ga0209404_105094244	3300027906	Marine	MDQSDMMISNLSETNTDFTLREHYAERIKFHMNMLNYYLNEQANDRVGN
Ga0183755_100242512	3300029448	Marine	MEQLDTLTLNQSEESMDFSLHDHYTERIQYHMTMLNYYLKEEKNDRMGN
Ga0308025_10283455	3300031143	Marine	MEQLDTQTSNLLEENMDFTLRDHHEERVKHHMKMLNYYLKEQKND
Ga0308025_10535215	3300031143	Marine	LDTQTSNLLEENMDFTLRDHHEERVKHHMKMLNYYLKEQKNDRMGD
Ga0307489_100964515	3300031569	Sackhole Brine	MDQLDTQTSIKLEESTDFTLHEHHKERISFHMRMLNHYLKEQKNDRMGT
Ga0307489_101857653	3300031569	Sackhole Brine	MNQLDTETSMQLEESTDFTLRDHHKERVSFHMRMLNHYLKEQKNDRMGN
Ga0307993_10514174	3300031602	Marine	MNQLDTKISIELEESTDFTLRDHHKERVSFHMRMLNHYLKEQKNDRMGT
Ga0302135_100049314	3300031625	Marine	MEQLYTEPSTILEENMDFSLHKHHKERVEYHMKMLNYYLKEEYNDRLGN
Ga0307377_106739784	3300031673	Soil	MDQLDTQTSTELEESTDFTLRDHHKERISFHMKMLNHYLNEQKNDRMGT
Ga0308011_101174635	3300031688	Marine	QTSNLLEENMDFTLRDHHEERIRHHMKMLNYYLKEQKNDRMGN
Ga0315322_1000438312	3300031766	Seawater	MDQLDTLKLTESEESMDFSLHDHYKERIGYHMKMLNYYLKEEKK
Ga0314858_120133_406_555	3300033742	Sea-Ice Brine	MDQLDTQTSIELEESTDFTLHEHHKERISFHMRMLNHYLKEQKNDRMGN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters