Metagenome / Metatranscriptome Family F090844

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090844
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	82 residues
Representative Sequence	MANDNPRKTSLEENNADPDLKPDATPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVAESERLDLDEYTATRPPDEKAGS
Number of Associated Samples	66
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.81 %
% of genes near scaffold ends (potentially truncated)	18.52 %
% of genes from short scaffolds (< 2000 bps)	77.78 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.593 % of family members)
Environment Ontology (ENVO)	Unclassified (28.704 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (31.481 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.71% β-sheet: 0.00% Coil/Unstructured: 88.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01871	AMMECR1	40.74
PF00986	DNA_gyraseB_C	12.04
PF02900	LigB	6.48
PF02463	SMC_N	2.78
PF02768	DNA_pol3_beta_3	1.85
PF07992	Pyr_redox_2	1.85
PF01751	Toprim	1.85
PF02769	AIRS_C	0.93
PF02894	GFO_IDH_MocA_C	0.93
PF02861	Clp_N	0.93
PF08241	Methyltransf_11	0.93
PF02518	HATPase_c	0.93
PF03575	Peptidase_S51	0.93
PF13535	ATP-grasp_4	0.93
PF00430	ATP-synt_B	0.93
PF01494	FAD_binding_3	0.93
PF12631	MnmE_helical	0.93
PF00395	SLH	0.93
PF13432	TPR_16	0.93
PF13519	VWA_2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2078	Predicted RNA modification protein, AMMECR1 domain	General function prediction only [R]	40.74
COG0187	DNA gyrase/topoisomerase IV, subunit B	Replication, recombination and repair [L]	12.04
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	1.85
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.85
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.93
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.93
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.93
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.93
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.26 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.11 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	3.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	3.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	3.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	3.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.70 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002915\|JGI25387J43893_1002914	All Organisms → cellular organisms → Bacteria → Acidobacteria	2142	Open in IMG/M
3300005177\|Ga0066690_11021765	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300005178\|Ga0066688_10569997	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300005179\|Ga0066684_10126943	All Organisms → cellular organisms → Bacteria → Acidobacteria	1595	Open in IMG/M
3300005184\|Ga0066671_10127778	All Organisms → cellular organisms → Bacteria → Acidobacteria	1451	Open in IMG/M
3300005184\|Ga0066671_10281216	All Organisms → cellular organisms → Bacteria → Acidobacteria	1037	Open in IMG/M
3300005184\|Ga0066671_10890594	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300005454\|Ga0066687_10271032	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300005560\|Ga0066670_10290762	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300005560\|Ga0066670_10798901	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300005575\|Ga0066702_10055161	All Organisms → cellular organisms → Bacteria → Acidobacteria	2151	Open in IMG/M
3300005985\|Ga0081539_10288198	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300006169\|Ga0082029_1339070	All Organisms → cellular organisms → Bacteria → Acidobacteria	1935	Open in IMG/M
3300007790\|Ga0105679_10434785	All Organisms → cellular organisms → Bacteria → Acidobacteria	1032	Open in IMG/M
3300009093\|Ga0105240_12192123	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300010039\|Ga0126309_10711687	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300010039\|Ga0126309_11099828	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300010044\|Ga0126310_10270074	All Organisms → cellular organisms → Bacteria → Acidobacteria	1156	Open in IMG/M
3300010045\|Ga0126311_10371534	All Organisms → cellular organisms → Bacteria → Acidobacteria	1094	Open in IMG/M
3300010045\|Ga0126311_10562527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300010045\|Ga0126311_10567644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300010045\|Ga0126311_10612101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300010166\|Ga0126306_11858987	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300012093\|Ga0136632_10247162	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300012212\|Ga0150985_111215869	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300012212\|Ga0150985_112964581	All Organisms → cellular organisms → Bacteria → Acidobacteria	1314	Open in IMG/M
3300012212\|Ga0150985_113870882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300012212\|Ga0150985_119601904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300012212\|Ga0150985_120127483	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300012212\|Ga0150985_122835774	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300012469\|Ga0150984_102268776	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300012469\|Ga0150984_102613758	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300012469\|Ga0150984_107823151	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300014487\|Ga0182000_10000013	All Organisms → cellular organisms → Bacteria → Acidobacteria	80879	Open in IMG/M
3300014487\|Ga0182000_10019613	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300014487\|Ga0182000_10037588	All Organisms → cellular organisms → Bacteria → Acidobacteria	1387	Open in IMG/M
3300014487\|Ga0182000_10038870	All Organisms → cellular organisms → Bacteria → Acidobacteria	1371	Open in IMG/M
3300014488\|Ga0182001_10000057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	27204	Open in IMG/M
3300014488\|Ga0182001_10000940	All Organisms → cellular organisms → Bacteria	5720	Open in IMG/M
3300014488\|Ga0182001_10027834	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300014488\|Ga0182001_10059436	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300014488\|Ga0182001_10064376	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300014488\|Ga0182001_10101620	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300014488\|Ga0182001_10361798	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300015161\|Ga0167623_1000064	All Organisms → cellular organisms → Bacteria	52229	Open in IMG/M
3300017789\|Ga0136617_10330640	All Organisms → cellular organisms → Bacteria → Acidobacteria	1246	Open in IMG/M
3300017789\|Ga0136617_11288227	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300018432\|Ga0190275_10318596	All Organisms → cellular organisms → Bacteria → Acidobacteria	1533	Open in IMG/M
3300018465\|Ga0190269_11118707	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300018468\|Ga0066662_10066736	All Organisms → cellular organisms → Bacteria → Acidobacteria	2386	Open in IMG/M
3300018468\|Ga0066662_10263841	All Organisms → cellular organisms → Bacteria → Acidobacteria	1418	Open in IMG/M
3300018468\|Ga0066662_11655471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300018920\|Ga0190273_10000473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	15214	Open in IMG/M
3300018920\|Ga0190273_10531281	All Organisms → cellular organisms → Bacteria → Acidobacteria	869	Open in IMG/M
3300018920\|Ga0190273_11121417	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300019767\|Ga0190267_10875109	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300019885\|Ga0193747_1000003	All Organisms → cellular organisms → Bacteria	368432	Open in IMG/M
3300020018\|Ga0193721_1111942	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300020146\|Ga0196977_1001226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	9960	Open in IMG/M
3300021184\|Ga0196959_10001754	All Organisms → cellular organisms → Bacteria → Acidobacteria	2782	Open in IMG/M
3300021445\|Ga0182009_10144688	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300021445\|Ga0182009_10557884	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300026300\|Ga0209027_1001466	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	8921	Open in IMG/M
3300026312\|Ga0209153_1128218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300026325\|Ga0209152_10059393	All Organisms → cellular organisms → Bacteria → Acidobacteria	1360	Open in IMG/M
3300026552\|Ga0209577_10469683	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300027075\|Ga0214467_1023211	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300027766\|Ga0209796_10246296	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300030510\|Ga0268243_1000014	All Organisms → cellular organisms → Bacteria	99134	Open in IMG/M
3300030510\|Ga0268243_1026398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1175	Open in IMG/M
3300030510\|Ga0268243_1040776	All Organisms → cellular organisms → Bacteria → Acidobacteria	984	Open in IMG/M
3300030513\|Ga0268242_1000112	All Organisms → cellular organisms → Bacteria	13617	Open in IMG/M
3300030513\|Ga0268242_1017456	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300030513\|Ga0268242_1026134	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300030515\|Ga0268254_10274857	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300030905\|Ga0308200_1131382	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300031058\|Ga0308189_10326316	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300031091\|Ga0308201_10424598	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300031092\|Ga0308204_10194792	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300031093\|Ga0308197_10373361	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300031114\|Ga0308187_10430014	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300031548\|Ga0307408_101107164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300031731\|Ga0307405_10692849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300032002\|Ga0307416_102975368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300032005\|Ga0307411_12062842	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300032126\|Ga0307415_100205925	All Organisms → cellular organisms → Bacteria → Acidobacteria	1565	Open in IMG/M
3300034000\|Ga0334918_005082	All Organisms → cellular organisms → Bacteria → Acidobacteria	1765	Open in IMG/M
3300034001\|Ga0334919_000002	All Organisms → cellular organisms → Bacteria	380120	Open in IMG/M
3300034001\|Ga0334919_000010	All Organisms → cellular organisms → Bacteria	261467	Open in IMG/M
3300034001\|Ga0334919_016366	All Organisms → cellular organisms → Bacteria → Acidobacteria	1262	Open in IMG/M
3300034002\|Ga0334920_000682	All Organisms → cellular organisms → Bacteria → Acidobacteria	13948	Open in IMG/M
3300034009\|Ga0334944_000057	All Organisms → cellular organisms → Bacteria → Acidobacteria	77257	Open in IMG/M
3300034009\|Ga0334944_002837	All Organisms → cellular organisms → Bacteria → Acidobacteria	3459	Open in IMG/M
3300034026\|Ga0334946_000002	All Organisms → cellular organisms → Bacteria	1446930	Open in IMG/M
3300034026\|Ga0334946_005404	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300034026\|Ga0334946_075334	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300034133\|Ga0334916_034813	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300034137\|Ga0334943_000504	All Organisms → cellular organisms → Bacteria	15577	Open in IMG/M
3300034172\|Ga0334913_015402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1753	Open in IMG/M
3300034172\|Ga0334913_029328	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199	Open in IMG/M
3300034172\|Ga0334913_041558	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300034174\|Ga0334932_000014	All Organisms → cellular organisms → Bacteria	220288	Open in IMG/M
3300034174\|Ga0334932_002453	All Organisms → cellular organisms → Bacteria	2915	Open in IMG/M
3300034377\|Ga0334931_000004	All Organisms → cellular organisms → Bacteria → Acidobacteria	698064	Open in IMG/M
3300034377\|Ga0334931_058010	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300034391\|Ga0334917_091390	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300034392\|Ga0334912_060279	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300034779\|Ga0334945_025937	All Organisms → cellular organisms → Bacteria → Acidobacteria	958	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.33%
Host-Associated	Host-Associated	16.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.56%
Plants	Host-Associated → Plants	16.67%
Aquatic	Environmental → Aquatic	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.48%
Freshwater	Environmental → Aquatic → Freshwater	2.78%
Phylloplane	Host-Associated → Plants → Phylloplane	1.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.37%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	7.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.56%
Ice	Environmental → Aquatic → Freshwater → Ice	2.78%
Sand	Environmental → Terrestrial → Soil → Sand	2.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.67%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	12.96%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	7.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.78%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.85%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.96%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	12.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.04%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.41%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	6.48%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	5.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.63%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.78%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.78%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015161	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1B, Ice margin)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027075	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq	Environmental	Open in IMG/M
3300027766	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030515	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034000	Biocrust microbial communities from Mojave Desert, California, United States - 14HMC	Environmental	Open in IMG/M
3300034001	Biocrust microbial communities from Mojave Desert, California, United States - 15HMC	Environmental	Open in IMG/M
3300034002	Biocrust microbial communities from Mojave Desert, California, United States - 16HMC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034133	Biocrust microbial communities from Mojave Desert, California, United States - 12HMC	Environmental	Open in IMG/M
3300034137	Biocrust microbial communities from Mojave Desert, California, United States - 39SMC	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M
3300034392	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 8HMS	Environmental	Open in IMG/M
3300034779	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 41SMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25387J43893_10029144	3300002915	Grasslands Soil	MSKDNPVQSSISERNEDPELKPDATPNPVEELNPANDKRSLDYGESGQFAHGGYYNQQGVNESNRIDLDEQVDSALNKDKA*
Ga0066690_110217652	3300005177	Soil	MANDNARKTTLEEKNAQPELKPDATPNATEELNPANDQRSLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRTPDDKTES*
Ga0066688_105699972	3300005178	Soil	MTNDNSRRSSLEETNADTELAPDASNAAEQVNPANDGRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEQTAGHAAGDKS*
Ga0066684_101269432	3300005179	Soil	MANDNARKTTLEEKNADPELKPDATPNATEELNPANDKRTLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRTPDDKTES*
Ga0066671_101277783	3300005184	Soil	MANDNPRKTSLEEKNADPELKPDATPNATEELNPANDQRSLDIGESGQFAPGGYYNQHGITESERLDLDDYTATRPPDDKSKS*
Ga0066671_102812162	3300005184	Soil	MANDNARKTTLEEKNAQPELKPDATPNATEELNPANDQRSLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRTP
Ga0066671_108905941	3300005184	Soil	MSKDNPVQSSISERNEDPELKPDATPNPVEELNPANDKRSLDYGESGQFAPGGYYNQQGVNESNRIDLDEQVDSALNKDKA*
Ga0066687_102710322	3300005454	Soil	MANDNPRKTSLEEKNADPELKPDATPNAAEELNPANDQRSLDIGESGQFAPGGYYNQHGITESERLDLDDYTATRPPDDKSK
Ga0066670_102907622	3300005560	Soil	MANDNPRKTSLEEKNADPELKPDATPNAAEELNPANDQRSLDIGESGQFAPGGYYNQHGITESERLDLDDYTATRPPDDKSKS*
Ga0066670_107989012	3300005560	Soil	MANDNARKTTLEEKNAQPELKPDATPNATEELNPANDKRTLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRTPDDKTES*
Ga0066702_100551613	3300005575	Soil	MANDNARKTTLEEKNAQPELKPDATPNATEELNPANDQRTLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRTPDDKTES*
Ga0081539_102881982	3300005985	Tabebuia Heterophylla Rhizosphere	MANDNPRQSSLEEKNADPDLKPDATPNAAEEVNPANDDRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGLAGGKAGSSGGSST*
Ga0082029_13390702	3300006169	Termite Nest	MANDNPRQTSLEETNADPDLKPDATPNAVEEVNPANDKRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGLAGGKAGSSGGSST*
Ga0105679_104347852	3300007790	Soil	MANDNPRQTSLEETNADPDLKPDATPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGLAGGKAGSSGGSST*
Ga0105240_121921232	3300009093	Corn Rhizosphere	MANDNSRRSSLEETNADPELTSDAPNAAEEVNPANDGRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEQTATRAAGDKS*
Ga0126309_107116872	3300010039	Serpentine Soil	MANDNFSKSTIDDSPADPDLKPDTTPNAVEENNPANDQRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEYTATRPADDKK*
Ga0126309_110998282	3300010039	Serpentine Soil	MANDNPRKTSLEESNADPDLKPDETPNATETVNPANDQRSLDIGESGQFAPGGYYNQHGVAESERLDLDE
Ga0126310_102700741	3300010044	Serpentine Soil	MANDNPRQTSLEEKNADPDLKPDATPNAAEEVNPANDDRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGLAGGKAGSSGGSST*
Ga0126311_103715342	3300010045	Serpentine Soil	MANDNFSKSTVDDSPADPDLKPDTTPNAVEENNPANDQRSLDIGESGQFAPGGYYNQHGVAEADRLDLDDIKTSLPSDDKK*
Ga0126311_105625273	3300010045	Serpentine Soil	DLKPDATPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGLAGGKAGSSGGSST*
Ga0126311_105676443	3300010045	Serpentine Soil	SNADPDLKPDETPNAAETVNPANDQRSLDIGESGQFAPGGYYNQHGVTESERLDLDEFTATRTPDDKAGS*
Ga0126311_106121012	3300010045	Serpentine Soil	MANDNPRQTSLEEKNADPDLKPDATPNAAEEVNPANDDRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTATGLAGGKAGSSGGSST*
Ga0126306_118589871	3300010166	Serpentine Soil	QRTRSRQMANDNATKSTMEEGSADPDLKPDTTPNAVEENNPANDQRSLDIGESGQFAPGGYYNQHGVKESERLDLDEYTATRPPDDKK*
Ga0136632_102471622	3300012093	Polar Desert Sand	MTNDNSRKTSLEESNADPDLKPDNTPNAAEEVNPANDQRSLDLGESGRFAPGGYYNQHGVTESERLDLDEYTATRTPDDKAES*
Ga0150985_1112158691	3300012212	Avena Fatua Rhizosphere	MANNSSNRSSLEDANAKTDLAPDAASAAQEVNPANDGRSLDIGESGQFAPGGYYNQHGAAESDRLDLDEQTATRAAGKKS*
Ga0150985_1129645812	3300012212	Avena Fatua Rhizosphere	MTNDKRNTTEDTNTDPDLVPDTPAAADEVNPAKDGRSLDLGESGQFAPGGYYNQHGVAEDNRIDLDEQVADALKNKP*
Ga0150985_1138708822	3300012212	Avena Fatua Rhizosphere	MANDNSRRSSLEETNSDTDLAPDAASTAEQVNPANDGRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEQTAARTAGDKS*
Ga0150985_1196019042	3300012212	Avena Fatua Rhizosphere	MVNDNSKRKSTEETSDTDLSPDAPTTAEQVNPANDGRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEQTTGHAAGDKS*
Ga0150985_1201274831	3300012212	Avena Fatua Rhizosphere	MANDNLKKSSLEESNADPELNPDSTPNAVEEVNPANDRRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQVSGRAASDKT*
Ga0150985_1228357742	3300012212	Avena Fatua Rhizosphere	MRNDNSKRQPTEGASDTDLSPDAPTTAEQVNPANDGRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEQTTEHAAGDKS*
Ga0150984_1022687762	3300012469	Avena Fatua Rhizosphere	MANDNSRINSTEDTNTDPDLVPDTPTAADEVNPAKDGRSLDLGELGQFAPGGYYNQHGVAEDNRIDLDEQVADALKNKP*
Ga0150984_1026137582	3300012469	Avena Fatua Rhizosphere	ANDSSQKNSSEETRAEDFSPDAPTTGEQVNPANDGRSLDIGESGQFAPGGYYNQHGVAEGDRIDLDEQVSGSKTGNKP*
Ga0150984_1078231512	3300012469	Avena Fatua Rhizosphere	MRNDNSKRQSTEGASDTGLSPDAPTTAEQVNPANDGRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEQTTEHAAGDKS*
Ga0182000_1000001351	3300014487	Soil	MANDNARKTSLEENNADPDLKPDATPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVKESERLDLDEYTATRTPDDKTGS*
Ga0182000_100196132	3300014487	Soil	MANDNPRKSTLEESPADPDLKPDTTPNAVEENNPANDQRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEFTATRPADDKK*
Ga0182000_100375882	3300014487	Soil	MKMADSTARKTSLEEKNADPELKPDATPNATEELNPANDKRTLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRTPDDKSGS*
Ga0182000_100388702	3300014487	Soil	MADDNPRQSSLEESNADPDLKPDATPNAVEEVNPANDKRSLDIGESGQFAPGGYYNQHGVNESDRLDLDEQTASGIAAGEKGNG*
Ga0182001_1000005722	3300014488	Soil	MANDNSKQSSLEDANAKTDLAPDAASTAQEVNPANDGRSLDIGESGQFAPGGYYNQHGVAESERLDLDEGTTGRATGNKS*
Ga0182001_100009402	3300014488	Soil	MANDNPRKTSLEESNADPDLKPDETPNAAETVNPANDQRSLDIGESGQFAPGGYYNQHGVAESERLDLDEFTATRTPDDKSGS*
Ga0182001_100278342	3300014488	Soil	MANDNPRKSTVGESPADPDLKPDTAPNAAEEINPANDKRSLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRPSDDKNK*
Ga0182001_100594362	3300014488	Soil	MANDNFSKSTMGDSPADPDLKPDTTPNAVEENNPANDQRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEFTATRPPDEKK
Ga0182001_100643762	3300014488	Soil	MADDNPRKTSLEESTSDPELKPDATPNAAEELNPANDKRTLDIGESGQFAPGGYYNQHGINESERLDLDEYTATRTPDKEQNK*
Ga0182001_101016202	3300014488	Soil	MANDNPRKTSLGETNADPDLKPDATPNAAEEVNPANDKRSLDVGESGQFAPGGYYNQHGVNESERLDLDEQTASGLAGGKAGSSGGSST*
Ga0182001_103617981	3300014488	Soil	MADNNPRESSIDDSSTGAGLEPGETTTAAEELNPANDKRSLDIGESGQFAPGGYYNQHGVTAPERIDLDEYTATNTSDDTKK*
Ga0167623_100006438	3300015161	Glacier Forefield Soil	MANDNPRQTSLEETNADPELKPDATPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGVTESERLDLDEYTATRTPDDKTKS*
Ga0136617_103306403	3300017789	Polar Desert Sand	MVNDNPRNAPLEESRAEGGVKPDATPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGVTESERLDLDEYTATRPAEDKTEQ
Ga0136617_112882271	3300017789	Polar Desert Sand	MTNDNSRKTSLEESNTDPDLKPDKTPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVAESERLDLDEYTATRTPDDQAGS
Ga0190275_103185963	3300018432	Soil	MANDNPRKTSLEENNADPDLKPDATPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVAESERLDLDEYTATRPPDEKAGS
Ga0190269_111187071	3300018465	Soil	MANDNPRQTSLEENNADPDLKPDHTPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVNKSERLDLDEQTSSGLAGGKAGGSGGSST
Ga0066662_100667363	3300018468	Grasslands Soil	MANDNPRKTSLEEKNADPELKPDATPNAAEELNPANDQRSLDIGESGQFAPGGYYNQHGITESERLDLDEYTATRPPDDKSKS
Ga0066662_102638412	3300018468	Grasslands Soil	MANDNPRKTSLEEKNADPELKPDATPNASEELNPANDQRSLDIGESGQFAPGGYYNQHGIVESERLDLDDYTATRSPDDKTES
Ga0066662_116554712	3300018468	Grasslands Soil	LEEKNAQPELKPDATPNATEELNPANDKRTLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRTPDDKTES
Ga0190273_100004737	3300018920	Soil	MANDNPRKSTLGDSPADPDLKPDTTPNAVEDNNPANDQRSLDIGESGQFAPGGYYNQHGVAESERLDLDEFTATRPPDNKK
Ga0190273_105312812	3300018920	Soil	MANDNPRQTSLEEKNADPDLKPDATPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGLAGGKAGSS
Ga0190273_111214171	3300018920	Soil	MADNNSRKTSLEESNADPDLKPDATPNATEEINPANDDRSLDIGESGQFAPGGYYNQHGVTESERL
Ga0190267_108751091	3300019767	Soil	MADDDKPHKSSVSDSPADPELKPERVPSATEEVNPANDDRSLDIGESGQFAPGGYYNQHGITEAERLDLDEYTATRTPDADAEK
Ga0193747_100000337	3300019885	Soil	MSKNNPVQSSISERNEDPELTPDATPNPVEELNPANDKRSLDYGESGQFAPGGYYNQSGVNESDRVDLDAQVDSALNKDKA
Ga0193721_11119422	3300020018	Soil	MADDNSRKTSIEESTSDPQLKPDSTPNAVEEVNPANDKRSLDIGESGQFAPGGYYNQHGVTESERLDLDEFTATRPPDKK
Ga0196977_10012267	3300020146	Soil	MADDNPRQSSLEETNADPDLKPDATPNAAEEVNPANDRRSLDIGESGQFAPGGYYNQHGVNKADRLDLDEQTSSGLAEGKAGGSGSSSG
Ga0196959_100017542	3300021184	Soil	MADDNPRKTSLEESNADPDLKPDATPNAAEELNPANDKRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGIAAGDKGNG
Ga0182009_101446881	3300021445	Soil	MANENLKRSSLEENKADPELKPDSTPSAVEEVNPANDKRSLDIGESGQFAPGGYYNQHGVEESDRIDLDEQVAGRAAGDKT
Ga0182009_105578842	3300021445	Soil	MTNANSRRSSLEEANADAELTPDAPNAAEEVNPANDGRSLDIGESGQFAPGGYYNQHGVAESDRLNLDEQVSGR
Ga0209027_10014664	3300026300	Grasslands Soil	MSKDNPVQSSISERNEDPELKPDATPNPVEELNPANDKRSLDYGESGQFAHGGYYNQQGVNESNRIDLDEQVDSALNKDKA
Ga0209153_11282183	3300026312	Soil	MANDNPRKTSLEEKNADPELKPDATPNAAEELNPANDQRSLDIGESGQFAPGGYYNQHGITESERLDLDDYTATRPPDDKSKS
Ga0209152_100593933	3300026325	Soil	MTNDNSRRSSLEETNADTELAPDASNAAEQVNPANDGRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEQTAGHAAGDKS
Ga0209577_104696832	3300026552	Soil	MANDNARKTTLEEKNAQPELKPDATPNATEELNPANDQRSLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRTPDDKTES
Ga0214467_10232111	3300027075	Soil	MANDNPRKTSLEESNADPDLKPDQTPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVNKADRLDLDEYTAT
Ga0209796_102462962	3300027766	Agave	MANDNPRKTSLEEKNADPELKPDATPNAAEELNPANDLRTLDIGESGQFAPGGYYNQQGATQAERIDLDEQVDSALKREK
Ga0268243_100001449	3300030510	Soil	MANDNARKTSLEENNADPDLKPDATPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVKESERLDLDEYTATRTPDDKTGS
Ga0268243_10263982	3300030510	Soil	MADSTARKTSLEEKNADPELKPDATPNATEELNPANDKRTLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRTPDDKSGS
Ga0268243_10407762	3300030510	Soil	MADDNPRQSSLEESNADPDLKPDATPNAVEEVNPANDKRSLDIGESGQFAPGGYYNQHGVNESDRLDLDEQTASGIAAGEKGNG
Ga0268242_10001127	3300030513	Soil	MANDNSKQSSLEDANAKTDLAPDAASTAQEVNPANDGRSLDIGESGQFAPGGYYNQHGVAESERLDLDEGTTGRATGNKS
Ga0268242_10174561	3300030513	Soil	MANDNPRKTSLEESNADPDLKPDETPNAAETVNPANDQRSLDIGESGQFAPGGYYNQHGVAESERLDLDEFTATRTPDDKSGS
Ga0268242_10261342	3300030513	Soil	MANDNPRKSTVGESPADPDLKPDTAPNAAEEINPANDKRSLDIGESGQFAPGGYYNQHGVVESERLDLDEYTATRPSDDKNK
Ga0268254_102748572	3300030515	Agave	MANDNPRKTSLEEKNADPELKPDATPNAAEELNPANDLRTLDIGESGQFAPGGYYNQHGIVESERLDLDEYTAT
Ga0308200_11313821	3300030905	Soil	MADDDKPRKSSVSDSPADPELKPERVPSATEEVNPANDDRSLDIGESGQFAPGGYYNQHGITEAERLDLDEYAATRTPDEAKKKGAS
Ga0308189_103263161	3300031058	Soil	MANDNPRQTSLEETNADPELKPDATPNAIEEVNPANDKRSLDIGESGQFAPGGYYNQHGITESERLDLDEYTATRTPDGKKEN
Ga0308201_104245981	3300031091	Soil	MANDNSRKTSLEETNADPDLKPDETPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVAESERLDLDEYTATRTPDDKSGS
Ga0308204_101947921	3300031092	Soil	MADDNPRQSSLEETNADPDLKPDATPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGIAAGEKGNG
Ga0308197_103733612	3300031093	Soil	MADDDKPRKSSVSDSPADPELKPERVPSATEEINPANDDRSLDIGESGQFAPGGYYNQHGVTEAERLDLDEYTATRPPDDAKKKGAS
Ga0308187_104300142	3300031114	Soil	MADDNPRKTSIEESASDPGLKPETTPNAAEELNPANDKRSLDIGESGQFAPGGYYNQHGINESERLDLDEYTATRPPDKK
Ga0307408_1011071642	3300031548	Rhizosphere	MANDNPRQTSLEEKNADPDLKPDATPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGLAGGKAGSSGGSGT
Ga0307405_106928493	3300031731	Rhizosphere	MANDNPRQTSLEENNADPDLKPDATPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGLAGGKAGSSGGSGT
Ga0307416_1029753682	3300032002	Rhizosphere	MANDNFRKTSLEESNADPELKPDETPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVAESERLDLDEFTATRTPDDKAGD
Ga0307411_120628421	3300032005	Rhizosphere	MENNNPNQTSGTPRQTSLDESKPESGLKPETAPNAVEELNPANDLRSLDLGESGQFAPGGYYNQHGVRESERLDLDEYTATRTPDKPKS
Ga0307415_1002059252	3300032126	Rhizosphere	MANDNPRQTSLEENNADPDLKPDATPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVNESERLDLDEQTASGLAGGKAGSSGGSG
Ga0334918_005082_1220_1474	3300034000	Hypolithic Biocrust	MADDDKPHKSSVSDSPADPELKPERVPSATEEVNPANDDRSLDIGESGQFAPGGYYNQHGITEAERLDLDEYTATRTPDSDAKK
Ga0334919_000002_68878_69120	3300034001	Hypolithic Biocrust	MADDNPRKTSIEESAADPELKPDATPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGVNKSERLDLDEYTATRTPDKE
Ga0334919_000010_256062_256304	3300034001	Hypolithic Biocrust	MADDNPRKTSIEESTSDPDLKPDTTPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGINESERLDLDEFTATRPPDKK
Ga0334919_016366_555_797	3300034001	Hypolithic Biocrust	MADDNSRKSSIEESTSDPELKPDSTPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGINESERLDLDEYTATRPPDKK
Ga0334920_000682_4902_5192	3300034002	Hypolithic Biocrust	VNRRSTKIIRTQGAQKMADDNPRKTSIEESTSDPDLKPDTTPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGINESERLDLDEFTATRPPDKK
Ga0334944_000057_74545_74787	3300034009	Sub-Biocrust Soil	MADDNSRKTSIEESTSDPELKPDSTPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGINESERLDLDEYTATRPPDKK
Ga0334944_002837_3153_3398	3300034009	Sub-Biocrust Soil	MANDNFSKSTVGDSPADPDLKPDTTPNAAEENNPANDQRSLDIGESGQFAPGGYYNQHGVAEDDRLDLDDIKTSLPSDDKK
Ga0334946_000002_286062_286310	3300034026	Sub-Biocrust Soil	MVDNDNQRDSSLNDSSADEGLKPKTAPTATEAVSPSHEQRSLDIGESGQFAPGGYYNQQGITESERIDLDEYTATRTPDDEK
Ga0334946_005404_1717_1968	3300034026	Sub-Biocrust Soil	MADDNPRKSTLGESTADPELKPDATPNAAEELNPANDKRTLDIGESGQFAPGGYYNQHGINESERLDLDEYTATRTPDKEPNK
Ga0334946_075334_2_205	3300034026	Sub-Biocrust Soil	MADDNPRKTSIEESTADPELKPDATPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGVNKSERLDL
Ga0334916_034813_178_420	3300034133	Hypolithic Biocrust	MANDNFRKSTVNDSPADPDLKPDTTPNAAEENNPANDQRSLDIGESGQFAPGGYYNQHGVAEADRLDLDDIKTSTSSDDK
Ga0334943_000504_5696_5941	3300034137	Biocrust	MANDNFSKSTVGDSPADPDLKPDTTPNAVEENNPANDQRSLDIGESGQFAPGGYYNQHGVAEADRLNLDDIKTSLPSDDKK
Ga0334913_015402_38_295	3300034172	Sub-Biocrust Soil	MQMANDNPRKSSLEESAADPDLTPDATPNPVEELNPANDKRSLDIGESGQFAPGGYYNQHGVAESERLDLDKFTDTRVKDGEKKG
Ga0334913_029328_578_826	3300034172	Sub-Biocrust Soil	MANDNPNKTTLAESNADPDLKPDATPNAAEEVNPANDQRSLDIGESGQFAPGGYYNQHGVAESERLDLDEYTATRTPDKKES
Ga0334913_041558_95_337	3300034172	Sub-Biocrust Soil	MADDNSRKSSIEESTSDPELKPDSTPNAAEEVSPANDKRSLDIGESGQFAPGGYYNQHGINESERLDLDEYTATRPPDKK
Ga0334932_000014_105260_105505	3300034174	Sub-Biocrust Soil	MANDNFSKSTMDDSPADPDLKPDTTPNAVEENNPANDQRSLDIGESGQFAPGGYYNQHGVAESDRLDLDEFTATRPPDEKK
Ga0334932_002453_2585_2827	3300034174	Sub-Biocrust Soil	MADDNPRKTSIEESTADPELKPDATPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGVNKSERLDLDEYTATRTPDKE
Ga0334931_000004_646231_646476	3300034377	Sub-Biocrust Soil	MANDNFRKSTVEDSPADPDLKPDTTPNAAEDNNPANDQRSLDIGESGQFAPGGYYNQHGVAEADRLDLDDIKTSLPSDDKK
Ga0334931_058010_268_519	3300034377	Sub-Biocrust Soil	MANDNPRKTSLEESNADPDLKPDETPNAVETVNPANDQRSLDIGESGQFAPGGYYNQHGIAESERLDLDDYTATRPPDDKTGS
Ga0334917_091390_349_579	3300034391	Hypolithic Biocrust	MANDNPRKSTLEDSPADEGLKPDTTPNAVEENNPANDQRSLDIGESGQFAPGGYYNQHGAAQSDRLDLDEFTATRPS
Ga0334912_060279_109_351	3300034392	Sub-Biocrust Soil	MADDNSRKSSIEGSTSDPELKPDSTPNAAEEVNPANDKRSLDIGESGQFAPGGYYNQHGINESERLDLDEYTATRPPDKK
Ga0334945_025937_555_800	3300034779	Sub-Biocrust Soil	MANDNFRKSTAGDSPADPDLKPDTTPNAVEDNNPANDQRSLDIGESGQFAPGGYYNQHGVAEADRLDLDDIKTSLPSDDKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090844

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences