Metagenome Family F090834

Overview

Basic Information

• Family ID: F090834
• Family Type: Metagenome
• Number of Sequences: 108
• Average Sequence Length: 71 residues
• Representative Sequence: MVRVPIRIREGASRFDVWVQAQSIRRAVGIAADRYPNADVRVSFPIDAEAFFVEEPGSRTARLRREWPERVAA
• Number of Associated Samples: 43
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 86.79 %
• % of genes near scaffold ends (potentially truncated): 20.37 %
• % of genes from short scaffolds (< 2000 bps): 85.19 %
• Associated GOLD sequencing projects: 40
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (71.296 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (66.667 % of family members)
• Environment Ontology (ENVO): Unclassified (69.444 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (77.778 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 14.85%
  β-sheet: 21.78%
  Coil/Unstructured: 63.37%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07883	Cupin_2	2.78
PF00583	Acetyltransf_1	2.78
PF08659	KR	1.85
PF04542	Sigma70_r2	1.85
PF00931	NB-ARC	0.93
PF07690	MFS_1	0.93
PF01571	GCV_T	0.93
PF04545	Sigma70_r4	0.93
PF00746	Gram_pos_anchor	0.93
PF00440	TetR_N	0.93
PF13490	zf-HC2	0.93
PF17042	NBD_C	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.85
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.85
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.85
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.85

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
All Organisms	root	All Organisms	28.70 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
cellular organisms	root	All Organisms → cellular organisms	28.70 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.70 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	19.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.85 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	15.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.85 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	15.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.85 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	15.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.85 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	11.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	0.93 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	11.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.85 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	0.93 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2140918013|NODE_9885_length_1093_cov_7.107045	Not Available	1125
3300000033|ICChiseqgaiiDRAFT_c2293027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1569
3300000364|INPhiseqgaiiFebDRAFT_100394264	Not Available	876
3300000787|JGI11643J11755_11334918	Not Available	561
3300001431|F14TB_106806335	Not Available	508
3300002568|C688J35102_119793139	Not Available	776
3300002568|C688J35102_120732838	Not Available	1442
3300004016|Ga0058689_10034939	Not Available	879
3300005562|Ga0058697_10058094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1502
3300005562|Ga0058697_10129967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1079
3300006169|Ga0082029_1763832	Not Available	515
3300006618|Ga0101566_10168905	Not Available	678
3300007790|Ga0105679_11004751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1553
3300009156|Ga0111538_12033935	Not Available	722
3300009789|Ga0126307_10002034	All Organisms → cellular organisms → Bacteria	13564
3300009789|Ga0126307_10004219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9929
3300009789|Ga0126307_10029744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	4194
3300009789|Ga0126307_10046701	All Organisms → cellular organisms → Bacteria	3378
3300009789|Ga0126307_10053420	All Organisms → cellular organisms → Bacteria	3157
3300009789|Ga0126307_10102608	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2268
3300009789|Ga0126307_10114889	Not Available	2140
3300009789|Ga0126307_10174855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1721
3300009789|Ga0126307_10211520	Not Available	1557
3300009789|Ga0126307_10507808	Not Available	973
3300009789|Ga0126307_10710003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	811
3300009789|Ga0126307_11049859	Not Available	659
3300009789|Ga0126307_11607658	Not Available	528
3300009840|Ga0126313_10023571	All Organisms → cellular organisms → Bacteria	4127
3300009840|Ga0126313_10056035	Not Available	2796
3300009840|Ga0126313_10132949	All Organisms → cellular organisms → Bacteria	1863
3300009840|Ga0126313_10236684	Not Available	1412
3300009840|Ga0126313_10422649	Not Available	1060
3300009840|Ga0126313_10486875	Not Available	987
3300009840|Ga0126313_11455592	Not Available	568
3300010036|Ga0126305_10016285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3834
3300010036|Ga0126305_10204385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1254
3300010036|Ga0126305_10233560	Not Available	1177
3300010036|Ga0126305_10304417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1035
3300010037|Ga0126304_10011623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	4817
3300010037|Ga0126304_10253516	Not Available	1158
3300010037|Ga0126304_10262821	Not Available	1138
3300010037|Ga0126304_10334173	Not Available	1006
3300010037|Ga0126304_11064321	Not Available	552
3300010037|Ga0126304_11102471	Not Available	543
3300010037|Ga0126304_11193325	Not Available	522
3300010038|Ga0126315_10075176	Not Available	1891
3300010038|Ga0126315_10313117	Not Available	971
3300010038|Ga0126315_11151898	Not Available	525
3300010039|Ga0126309_10195927	Not Available	1115
3300010039|Ga0126309_10247354	Not Available	1009
3300010040|Ga0126308_10131397	Not Available	1565
3300010040|Ga0126308_10196973	Not Available	1293
3300010040|Ga0126308_10211552	Not Available	1249
3300010040|Ga0126308_10237413	Not Available	1182
3300010040|Ga0126308_10254140	Not Available	1144
3300010040|Ga0126308_10356574	Not Available	970
3300010040|Ga0126308_10408742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	906
3300010040|Ga0126308_10449838	Not Available	865
3300010041|Ga0126312_10036664	All Organisms → cellular organisms → Bacteria	3275
3300010041|Ga0126312_10214428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1347
3300010041|Ga0126312_10474495	Not Available	894
3300010041|Ga0126312_10504048	Not Available	866
3300010042|Ga0126314_10389606	Not Available	1003
3300010042|Ga0126314_10500532	Not Available	882
3300010042|Ga0126314_10640976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	776
3300010042|Ga0126314_10945153	Not Available	638
3300010044|Ga0126310_10105389	Not Available	1717
3300010044|Ga0126310_10126130	Not Available	1594
3300010044|Ga0126310_10259900	Not Available	1175
3300010044|Ga0126310_10310887	Not Available	1089
3300010044|Ga0126310_10581998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	832
3300010044|Ga0126310_10717426	Not Available	760
3300010044|Ga0126310_11766192	Not Available	515
3300010045|Ga0126311_10867331	Not Available	731
3300010045|Ga0126311_11262011	Not Available	613
3300010045|Ga0126311_11364540	Not Available	591
3300010045|Ga0126311_11554951	Not Available	555
3300010045|Ga0126311_11662419	Not Available	538
3300010166|Ga0126306_10106424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2034
3300010166|Ga0126306_10289093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1260
3300010166|Ga0126306_10438053	Not Available	1026
3300010166|Ga0126306_10899132	Not Available	718
3300010166|Ga0126306_11221491	Not Available	618
3300010166|Ga0126306_11837101	Not Available	508
3300010395|Ga0058701_10492684	Not Available	695
3300014487|Ga0182000_10137169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	869
3300014487|Ga0182000_10586020	Not Available	536
3300018432|Ga0190275_10952224	Not Available	928
3300018465|Ga0190269_10331448	Not Available	905
3300018465|Ga0190269_10433042	Not Available	827
3300018466|Ga0190268_12045414	Not Available	529
3300018469|Ga0190270_12244283	Not Available	606
3300018920|Ga0190273_12040427	Not Available	532
3300019767|Ga0190267_10689236	Not Available	654
3300028721|Ga0307315_10164021	Not Available	679
3300028722|Ga0307319_10038826	All Organisms → cellular organisms → Bacteria	1484
3300028754|Ga0307297_10001670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	5315
3300030496|Ga0268240_10012041	Not Available	1498
3300030510|Ga0268243_1077912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	749
3300031852|Ga0307410_10190906	All Organisms → cellular organisms → Bacteria	1558
3300031901|Ga0307406_11622944	Not Available	572
3300031995|Ga0307409_101550095	Not Available	690
3300032002|Ga0307416_102339860	Not Available	634
3300032126|Ga0307415_101078174	Not Available	751
3300032126|Ga0307415_101132555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	734
3300032159|Ga0268251_10375062	Not Available	610

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.89%
Host-Associated	Host-Associated	11.11%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Plants	Host-Associated → Plants	11.11%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.48%
Phylloplane	Host-Associated → Plants → Phylloplane	3.70%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.93%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.48%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.70%
Loam	Environmental → Terrestrial → Soil → Loam	2.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.93%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	81.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.70%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.78%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.93%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	66.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.70%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.78%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.93%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.93%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated
3300006169	Termite nest microbial communities from Madurai, India	Environmental
3300006618	Soil microbial communities from the Leymus chinensis steppe, China - without N addition	Environmental
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01779010	2140918013	Soil	MVRVSILIREGASRFDVSVQAQNIRRAVAIAAARYPGADVRVSFPIDAERFFVEEPGSRATRLGRERLEKAAA
ICChiseqgaiiDRAFT_22930272	3300000033	Soil	VMVRVSILIREGASRFDVSVQAQNIRRAVAIAAARYPGAXVXVSFPIDAERFFVEEPGSRAARLGRERLEKAAA*
INPhiseqgaiiFebDRAFT_1003942641	3300000364	Soil	MVRVSILIREGASRFDVSVQAQXIRRAVXXAAXRYPXAXVXVSFPIDAESFFVEEPGSRATRLGRERLERVAA
JGI11643J11755_113349182	3300000787	Soil	MVRVSILIREGASRFDVSVQAQNIRRAVAIAAARYPGADVRVSFPIXAERFFVEEPGSRAARLGRERLEKAAA*
F14TB_1068063352	3300001431	Soil	LIREGASRFDVSVQAQNIRRAVEIAAAXXXXXXXXXXXXXXAELFFVEEPGSRAARLGRERLEKAGA*
C688J35102_1197931392	3300002568	Soil	MVRVSIRIREGACRFDVSVQAQSIRRAVAIAADRYPGADVRVSFPIDAEAFFVQEPVSRTARLGRERPERVAA*
C688J35102_1207328381	3300002568	Soil	MVRVSIRIREVASRFNVSVQAQSIPRAVGIAADRCPDADVRVSFPIDGEAFFVQEPATRTARLRSEWPERVAA*
Ga0058689_100349391	3300004016	Agave	LVKVPILIREGASRLFVSVQARSIRRAVEIAKARYPGADVRTSFPIDAEVFFVEEPGSGVARLGRG*
Ga0058697_100580942	3300005562	Agave	LVKVPILIREGASRLFVSVQARSIRRAVEIAKDRYPGADVRVSFPIDAEVFFVEEPGSRVARLGRE*
Ga0058697_101299672	3300005562	Agave	MVRVSIRIRDGATRFDVSVQAQSIRRAVRIAADRYPGADVRLSFPIDAGAFFVEEPATRTARLGRERPERVAA*
Ga0082029_17638322	3300006169	Termite Nest	VMVRVRILIREGAFRFDVSVQAQNIRRAVAIAAARYPGADVRVSFPIDAERFFVEEPGSRATRLGRERLEKAAA*
Ga0101566_101689053	3300006618	Soil	MVRVSIRIREGASCFDVSVRAQSFRRALSIAADRYPGADVRVSFPIDAGVFFVEEPVSRTARLRREWPERVAV*
Ga0105679_110047512	3300007790	Soil	MVRVSIRIREGASCFDVSVQAQSIRRSLEIAADRHPNADVRVSFPIDAEAFFVEEPATRTARLRREWPERVAA*
Ga0111538_120339352	3300009156	Populus Rhizosphere	SIRIREGASCFDVSVQAQSIRRAVGIAADRYPGAEVRVRFPIDEQAFFVEEPGSRTARVGRERPERLAA*
Ga0126307_100020349	3300009789	Serpentine Soil	MVRVSIRIREGASRFDVSVQAQSIPRAVEIAADRYPDADVRVSSPIDGGAFFVEEPATRTARLRREWPERVAA*
Ga0126307_1000421911	3300009789	Serpentine Soil	MVRVSIRIREGASCFDVSVKAQSIRRAVDIAAHRYPGADVRVSFPLDAEAFFVKEPGTRAELPGREWPEMAAA*
Ga0126307_100297443	3300009789	Serpentine Soil	MVRLSIRIREGASRFDVSVQAQSIRRAVGIAAARYPGADVRVSFPIDAEAFFVEEPGARAERFRRRQPERVAA*
Ga0126307_100467013	3300009789	Serpentine Soil	MVRVPILIREGASRFFVSVQARSIRRAVEIAKARYPGADVRVSFPIDADAFFVEEPGSRVAQLGREQPERVAV*
Ga0126307_100534203	3300009789	Serpentine Soil	MVRVSIRIREGASRFDVLVQAQSIRRAVGIAAARYPGADVRVSFPIYAEAFFVEEPGTRAERLRREQPERVAA*
Ga0126307_101026082	3300009789	Serpentine Soil	MVRVSIRIREGASRFDVSVRAQSIRRALSITADGYPNADVRVSFPIDAGVFFVEEPVSRTAQLRREWPERVAA*
Ga0126307_101148892	3300009789	Serpentine Soil	MVRVSIQIREGASSFDVSVQAQSIRRAVEIAAARYPGADLRVSFPIDAEAYFVEELGSRAARLGRERPERVAA*
Ga0126307_101748554	3300009789	Serpentine Soil	MVRVPIRIREGASCFDVSVQAQSIRRAVGIAADRYPNADVRVSFPIDAEAFFGEEPGSRTARLRRE*
Ga0126307_102115203	3300009789	Serpentine Soil	MVRVPIRIREGASRFDVWVQAQSIRRAVGIAADRYPNADVRVSFPIDAEAFFVEEPGSRTARLRREWPERVAA*
Ga0126307_105078082	3300009789	Serpentine Soil	MVRVSIPEGASYFDVSVQAQSIRRALGIAADRYPKADVQVSLPIDAGVFFVEEPVSRTAWLRREWPERVAA*
Ga0126307_107100032	3300009789	Serpentine Soil	MVRVSIRIREGASRFDVRVQAQSIPQAVGIAADRYPNADVRVSFPIDAEAFFVEEPVSRTARLGREWPERVAA*
Ga0126307_110498592	3300009789	Serpentine Soil	MVRVPIRIREGASPFDVWVQAQSIRRAVGIAVARYPGAEVRVSFPIDAEAFFVEELGTRAELLRRERPERLAA*
Ga0126307_116076581	3300009789	Serpentine Soil	MARVSIRLREGASCFDVSIQAQNTRQASHRDTHGYSGADVRVSFPVDGEVFFVEEPGSRAARLRSEWPERVAA*
Ga0126313_100235711	3300009840	Serpentine Soil	MVRVSIRIREGTCCFDVSVQAQSIPRAVEIAADRHPDADVRVSSPIDGGAFFVEEPVSQTARLRREWPERVAA*
Ga0126313_100560353	3300009840	Serpentine Soil	MVRVPILIREGASRFDVSVQAQSIRRAKGIAAALYLGADVRVSFPIDADAFFVEEPGSRVAQLGREQPERVAV*
Ga0126313_101329491	3300009840	Serpentine Soil	MVRVSIRIREGASCFDVSVRAQSIRRALSITADRYPGADVRVSFPIDAGVFFVEEPVSRTTRLRREGPKG*
Ga0126313_102366842	3300009840	Serpentine Soil	MVRVSIRIREGASRFDIPVQAQSIRRALGIAAARYPGADVRVSFPIDAETFFAGEPGSRAARLGRERSERVAA*
Ga0126313_104226493	3300009840	Serpentine Soil	SSRFDVWVQARSIRRAVEIAVASYPAADVRVRFPIDAEAFFVEEPGLRAARLRRQRPERVAV*
Ga0126313_104868752	3300009840	Serpentine Soil	MVRVSIRIREGASRFDVSVQAQSIRRALGIAAARYPGADVQVSFPIDDEAFFVEKPLDARAELLRREQPERVAA*
Ga0126313_114555922	3300009840	Serpentine Soil	MVRVSIRIREGASRFDVLVQAQSIRRAVGIAAARYPGADVRVSFPIDAEAFFVEEPGTRAERLRREQPERVAA*
Ga0126305_100162857	3300010036	Serpentine Soil	MVRVSIRIREGASRFDVRVQAQSIPQAVGIAADRYPNAEVRVSFPIDAEAFFVEEPVSRTARLGREWPERVAA*
Ga0126305_102043851	3300010036	Serpentine Soil	MVRVPILIREGASRFFVSVQARSIRRAVEIAKARYPSADVWVSFPIDAEAFFVEEPGSRAARLAREQPEGVAL*
Ga0126305_102335601	3300010036	Serpentine Soil	MVRVPILIREGASRFFVSVQARSIRRAVEIAKARYPGADVRVSVPIDADAFFVEEPGSRVAQLGREQPERVAV*
Ga0126305_103044172	3300010036	Serpentine Soil	MVRVPIRIREGASPFDVWVQAQSIRRAVGIAVARYPGAEVRVSFPIDAEAFFVEEPGTRAELLRRERPERLAA*
Ga0126304_100116239	3300010037	Serpentine Soil	MVRVPIRIREGASCFDVSVQAQSTRRAVGIAADRYPNADVRVSFPIDAEAFFGEEPGSRTARLRRE*
Ga0126304_102535161	3300010037	Serpentine Soil	MVRVPIRIREGSSRFDVSVQAQCIRRAVRIAADRYPNADVQVSFPIDAEAFFAEEPGTRAELLGRERPARTAA*
Ga0126304_102628212	3300010037	Serpentine Soil	MVRVSIRIREGASRFDVSVRAQSIRRALSITADGYPHADVRVSFPIDAGVFFVEEPVSRTARLR
Ga0126304_103341731	3300010037	Serpentine Soil	RVPIRIREGASCFDVSVQAQSIRRAVRIAADRYPNAEVRVSFPIDAGVFFVVEPVSRTARLRREWPERVAA*
Ga0126304_110643211	3300010037	Serpentine Soil	MVRVSILIREGASRFDVSVQAQNIRRAVAIAAARYPGADVRVSFPIDAELFFVEEPGSRAARLG
Ga0126304_111024712	3300010037	Serpentine Soil	MVRVPIRIREGASPFDVWVQAQSIRRAVGIAVARYPGAEVRVSFPIDAEAFFVEEPGTRAELLRRERPERVAA*
Ga0126304_111933251	3300010037	Serpentine Soil	MVRVSIRIREGASRFDVSVQAQSIRRAVGIAADRYPGADVRVSFPIDAEAFFVEEPVSRTARLGREWPETVAA*
Ga0126315_100751763	3300010038	Serpentine Soil	MVRVPIRIREGSSRFDVWVQARSIRRAVEIAVASYPAADVRVRFPIDAEAFFVEEPGLRAARLRRQRPERVAV*
Ga0126315_103131172	3300010038	Serpentine Soil	MVRVSIRIREGASRFDVLVQAQSIRRAVGIAAARYPGADVRVSFPIDAEAFFVEEPGTRAERLRREQPER
Ga0126315_111518981	3300010038	Serpentine Soil	MVRVSIRIREGASRFDILVQAQSIRRALGIAAARYPGADVRVSFPIDAETFFAGEPGSRAARLGRERSERVAA*
Ga0126309_101959271	3300010039	Serpentine Soil	MVRVPIRIREGASRIDVSVQAQSIRRAVRIAADRYPNADVQVSFPIDAEAFFAGEPGTPAELLRRERSERVAA*
Ga0126309_102473543	3300010039	Serpentine Soil	MVRVSIRIREGASCFDVSVQAQSIRRALGIAADRYPNADVRVSFPIDAGEFFVEEPVSRTARLGHEWPERVAA*
Ga0126308_101313972	3300010040	Serpentine Soil	MVRVPIRIREGASRFDVSVQAQSIRRAVRIAADRYLNADVRVSFPIDAGVFFVKEPVSRTARLRREWPDRVAA*
Ga0126308_101969733	3300010040	Serpentine Soil	VMVRVSIRIREGASRFDVSVQAQSIRRALGIAAARCPGADVQVSFPIDAETFFVEKPGSRAELLRCEQPERVAA*
Ga0126308_102115521	3300010040	Serpentine Soil	MVRVSIPEGASYFDVSVQAQSIRRALGIAADRYPNADVQVSLPIDAGVFFVEEPVSRTAWLRREWPERVAA*
Ga0126308_102374133	3300010040	Serpentine Soil	MVRVPIRIREGASRFDVWVQAQSIRRAVGIAVARYPGAEVRVSFPIDAEAFFVEEPGTRAELLRRERPERVAA*
Ga0126308_102541402	3300010040	Serpentine Soil	MVRVSIRIREGASCFDVSVRAQSIRRALSIAADRYPGADVRVSFPIDAEAFFVKEPVSRTARLRREWPERVAA*
Ga0126308_103565742	3300010040	Serpentine Soil	MVRVSIRIREGASCFDVSVQAQSIRRAVDIAAARYPAADVQVSFPIDAETFFVEEPGSRAERLRREQPERVAA*
Ga0126308_104087422	3300010040	Serpentine Soil	MVRVSIRIREGASRFDVSVQAQSIRQAVGIAVARYPGADVRVSFPIDAEAFFVEEPVSQAARLGREWPERVAA*
Ga0126308_104498382	3300010040	Serpentine Soil	MVRVPILIREGASRFFVSVQARSIRRAVEIAKARYPSADVWVSFPIDAEAFFVEEPGSRAARLAREQLEGVAL*
Ga0126312_100366641	3300010041	Serpentine Soil	MVRVSIRIREGASCFDVSVQAQSIPRAVEITADRCPGADVRVSSPIDGGVFFVEEPVSRTAWLRREWPERVAA*
Ga0126312_102144282	3300010041	Serpentine Soil	MVRVPIRIREGSSRFDVWVQAQSIRRAVGIAADGYPNADVRVNFPIDAEAFFVEEPGSRTARLGREWPERVAA*
Ga0126312_104744952	3300010041	Serpentine Soil	MVRVPIRIREGPSRFDVWVQAQSIPRAVGIAVARYPGADVRVSVPIDAEAFFVEEPGTRAELLRRERPERVAA*
Ga0126312_105040482	3300010041	Serpentine Soil	MVRVSILIREGASRFGVSVQARSIRRAVSIAAARYPGADVRVSFPIDAEAFFVEEPGSRAARLGRERSERVAA*
Ga0126314_103896063	3300010042	Serpentine Soil	MVRVSIRIREGASYFDVSVRAQSIRRALGIAAGRYPNADVRVSFPIDAGVFFVEEPVSRSARLRREWPERVAA*
Ga0126314_105005322	3300010042	Serpentine Soil	MVRVSIRIREGASRFDVSVQAQSIRRAVDIAAARYLGADVQVSFPIDAEAFFVEKPLDARAELLTAEQPERVAA*
Ga0126314_106409762	3300010042	Serpentine Soil	IREGASRFDVSVQAQSIRRAVEIAADRYPNADMRVSFPIDAEAYFVEEPASRTARLRREWTERVVA*
Ga0126314_109451532	3300010042	Serpentine Soil	MVRVSIRIREGASRFDVSVQAQSIRQAVGIAVARYPGADVRVSFPIDAEAFFVEEPVS
Ga0126310_101053892	3300010044	Serpentine Soil	MVSVSIRIRESTSRFDVSVQAQSIRRAVGIAAVRYPGADVQVRFPIDAEAFFVEKPCARAERLRREQLERVAA*
Ga0126310_101261302	3300010044	Serpentine Soil	MVRVSIRIREGASCFDVSVQAQSIPRAVEIAADRYPDADVRVSSPIDGGVFFVEEPVSRTAWLRREWPERVAA*
Ga0126310_102599002	3300010044	Serpentine Soil	MVRVPIRIREGPSCFDVSVQAQIIRRALRIAADRYPNADVRISFPIDAEAFFVEEPGTRAELLRRERSERVAA*
Ga0126310_103108872	3300010044	Serpentine Soil	MVRVSIRIREGASRFDVSVQAQSIRRALGIAAARYPGADVQVSFPIDDETFFVEEPGSRAERLRREQPERVAA*
Ga0126310_105819982	3300010044	Serpentine Soil	MVRVSIRIREGASRFDVSVQAQSIRRAVEIAADRYPNADMRVSFPIDAEAYFVEEPASRTARLRREWTERVAA*
Ga0126310_107174262	3300010044	Serpentine Soil	MVRVSIRIRETEGASRFDVSVQAQSIRRALGIAAARYPGADVRVSFPIDAEAFFVEEPRVRLELLTPEQPERVAA*
Ga0126310_110599392	3300010044	Serpentine Soil	VQAQSIRQAVGIAVARYPGADVRVSFPIDAEAFFVEEPVSRADQLRREWPERVAA*
Ga0126310_117661921	3300010044	Serpentine Soil	MVRVPIRIREGSSRFDVWVQAQSVRRAVGIAADRYPNADVRVSFPIDAEAFFVEEPGSRTARLRREWPERVAA*
Ga0126311_100039989	3300010045	Serpentine Soil	DVSVQAQSIPRAVEIAADRYPDADVRVSSPIDGGAFFVEEPATRTARLRREWPERVAA*
Ga0126311_108673311	3300010045	Serpentine Soil	RIREGASRFDILVQAQSIRRALGIAAARYPGADVRVSFPIDAETFFAGEPGSRAARLGRERSERVAA*
Ga0126311_112620112	3300010045	Serpentine Soil	ASCFDVSVQTQSIRRAVGIAANRYPGADVRVGFPIDAEAFFVKEPGTRAEPLGSEQTVRVAV*
Ga0126311_113645401	3300010045	Serpentine Soil	CFDVSVQAQSIPRAVEIAADRYPDADVRVSSPIDGGVFFVEEPVSRTAWLRREWPERVAA
Ga0126311_115549512	3300010045	Serpentine Soil	MVRVSIRIREGASRFDVSVQAQSIPRALGIAAARYPGADVQVSFPIDDEAFFVEKPLDARAELLRREQPERVAA*
Ga0126311_116624192	3300010045	Serpentine Soil	MVRVSIRIREGASRFDVSVQAQSIRRALGIAAARCPGADVQVSFPIDAETFFVEKPGSRAELLRCEQPERVAA*
Ga0126306_101064243	3300010166	Serpentine Soil	MVRVPIRIREGASCFDVSVQAQSIRRAVGIAVARYPGAEVRVSFPIDAEAFFVEEPGTRAELLRRERPERLAA*
Ga0126306_102890932	3300010166	Serpentine Soil	MVRVSIRIREGASCFDVSVQAQSIPRAVEIAADRYPDADVRVSSPIDGGAFFVEEPATRTARLRREWPERVAA*
Ga0126306_104380531	3300010166	Serpentine Soil	MVRVPIRIREGASCFDVSVQAQSIRRALGIAADRYPNADVRVSFPIDARVFFVEEPVSRTARLRREWPERVAV*
Ga0126306_108991322	3300010166	Serpentine Soil	MVRVLIRIRETEGASRFDVSVQAQSIRRALGMAAARYPGADVRVSFPIDAEAFFVEEPGARVELLRREQPERVAA*
Ga0126306_112214911	3300010166	Serpentine Soil	GASCFDVSVQAQSIRRAVGIAADRYPNADVRVSFPIDAEAFFGEEPGSRTARLRRE*
Ga0126306_118371011	3300010166	Serpentine Soil	MVRVSILIREGASRFDVSVKAQSIRRAIGIAAALYPSADVRVRFPIDAEAFFVEEPGARAELLTRQQPDGVAA*
Ga0058701_104926841	3300010395	Agave	MVRVSIRIREGASRFDVSVQAQSIRQAVGIAVARYPGADVRVRFPLDGEVFFVEEPGSRAARFRRERPERSAA*
Ga0182000_101371692	3300014487	Soil	MVRVSIRIREGASCFDVWLQAQSIRQAVGIAADRYPNADVRVSFPIDAEAFFVEEPASRTARLRREWPERVAA*
Ga0182000_105860201	3300014487	Soil	MVRVSIRIREGASCFDVSVQAQSIRRSLEIAADRHPNADVRVSFPIDAEAFFVEEPATRTARLRRERPERVAA*
Ga0190275_109522242	3300018432	Soil	MVRVPILIREGASRFFVSVQARSIRRAVEIAKARYPSADVWVSFPIDAEAFFVEEPGSRAARLAREQPEGVAL
Ga0190269_103314483	3300018465	Soil	MVRVRIRIREGSSCSDVLVQAQSIRRAVEIAADRCPNADVRVSFPIDGGAFFVEEPATRTARLRREW
Ga0190269_104330422	3300018465	Soil	VMVRVSILIREGASRFDVSVQAQSIHRALGMAAARYPDADVQVSFPIDAEAFFVEEPGTGAELLRREQPERAAA
Ga0190268_120454142	3300018466	Soil	LIREGASRFFVSVQARSIRRAVEIAKARYPGADVRVSFPIDAEAFFVEKPGARAERLARGEPERVAA
Ga0190270_122442832	3300018469	Soil	MVRVWILIQEGASRFDVSVQAQSIRRAVEIAAARYPGADVRVSFPIDAETFFAGEPGSRAARLGRERSERVAA
Ga0190273_120404272	3300018920	Soil	MVRVPIRIREGASRIDVSVQAQSIRRAVRIAADRYPNADVQVSFPIDAEAFFAEEPGTPAELLRRERSERVAA
Ga0190267_106892362	3300019767	Soil	MVRVSIRIREGASRFNVSMQAQSIPRAVEIAADRYPDADVRVSFPIDGEAFFVEEPATRTARL
Ga0307315_101640213	3300028721	Soil	MARISIRIREGASRFDVSVQAQSIRQAVEIAADRYPNADVRVSFPIDGGAFFVDEPATRTARLRREWPERIAA
Ga0307319_100388261	3300028722	Soil	MVRVSIRIREGASCFDVSVQAQSIRRALGIAADRYPNADVQVSFPIDAEAFFVEEPGTPAELLRRERSER
Ga0307297_100016708	3300028754	Soil	MVGVSIRIREGASRFDVSIQAQSIRRAVEIAADRYPNADVRVSFPIDGGAFFVEEPASRAAQLSREWPERVAA
Ga0268240_100120412	3300030496	Soil	VMVRVSILIREGASRFDVSVQAQNIRRAVAIAAARYPGADVRVSFPIDAERFFVEEPGSRATRLGRERLEKAAA
Ga0268243_10779121	3300030510	Soil	MVRVSIRIREGASCFDVSVQAQSIRRSLEIAADRHPNADVRVSFPIDAEAFFVEEPASRTARLRREWPERVAA
Ga0307410_101909061	3300031852	Rhizosphere	MVRVSIRIREGASRFDVWVQAQSIRQAVGIAVARYPGADVRVSFPIDAEAFFVEEPVSRADQLRREWP
Ga0307406_116229442	3300031901	Rhizosphere	RFDVPVQAQSIRRAVGIAAARYPGADVWMSFPIDAEAFFVEEPGARAERLRRGQPERVAA
Ga0307409_1015500951	3300031995	Rhizosphere	MVRVSIRIREGASRFDVWVQAQSIRQAVGIAVARYPGADVRVSFPIDAEAFFVEEPVSRADQLRREWPERVAA
Ga0307416_1023398602	3300032002	Rhizosphere	SRFDVPVQAQSIRRAVGIAAARYPGADVWMSFPIDAEAFFVEEPGARAERLRRGQPERVA
Ga0307415_1010781742	3300032126	Rhizosphere	MVRVSIRIREGASRFDVLVQAQSIRRAVGIAAARYPGADVRVSFPIDAEAFFVEEPGTRAERLRREQPERVAA
Ga0307415_1011325551	3300032126	Rhizosphere	LVKVPILIREGASRLFVSVQARSIRRAVEIAKDRYPGADVRVSFPIDAEVFFVEEPGSRVARLGR
Ga0268251_103750622	3300032159	Agave	MVRVSIRIREGASCFDVSVQAQSIRRALSIAADRYPNADVRVSFPIDAGMFFVVEPVSRTARLRREWPERVAA