Metagenome Family F090778

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090778
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	90 residues
Representative Sequence	MHLYIVVDCKTTNCRTAHVLTYLGEKGKTPVTVEYWMSYPLMIDCPACGKTYDYSDSEDKFRQKELPLAPPFECFNRLALPKFLNPAPTAAS
Number of Associated Samples	68
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.45 %
% of genes near scaffold ends (potentially truncated)	25.93 %
% of genes from short scaffolds (< 2000 bps)	63.89 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.852 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (34.259 % of family members)
Environment Ontology (ENVO)	Unclassified (53.704 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (80.556 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.00% β-sheet: 22.50% Coil/Unstructured: 72.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with PDB biological assemblies

PDB ID	Structure Name	Biol. Assembly	TM-score
4z5v	CRYSTAL STRUCTURE OF MHV NS2 PDE DOMAIN	1	0.53185
4h7u	CRYSTAL STRUCTURE OF PYRANOSE DEHYDROGENASE FROM AGARICUS MELEAGRIS, WILDTYPE	1	0.52363
5zu3	EFFECT OF MUTATION (R554K) ON FAD MODIFICATION IN ASPERGILLUS ORYZAE RIB40FORMATE OXIDASE	2	0.5224
2fyh	SOLUTION STRUCTURE OF THE 2'-5' RNA LIGASE-LIKE PROTEIN FROM PYROCOCCUS FURIOSUS	1	0.5223

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13531	SBP_bac_11	35.19
PF13620	CarboxypepD_reg	3.70
PF01872	RibD_C	2.78
PF14026	DUF4242	2.78
PF02687	FtsX	1.85
PF13304	AAA_21	1.85
PF00296	Bac_luciferase	1.85
PF00239	Resolvase	1.85
PF03459	TOBE	1.85
PF00174	Oxidored_molyb	1.85
PF12704	MacB_PCD	0.93
PF01862	PvlArgDC	0.93
PF01261	AP_endonuc_2	0.93
PF14256	YwiC	0.93
PF03965	Penicillinase_R	0.93
PF06897	DUF1269	0.93
PF02683	DsbD	0.93
PF01867	Cas_Cas1	0.93
PF01590	GAF	0.93
PF03372	Exo_endo_phos	0.93
PF09312	SurA_N	0.93
PF02129	Peptidase_S15	0.93
PF12728	HTH_17	0.93
PF02055	Glyco_hydro_30	0.93
PF01641	SelR	0.93
PF03795	YCII	0.93
PF08843	AbiEii	0.93
PF00072	Response_reg	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.78
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.78
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	1.85
COG3915	Uncharacterized conserved protein	Function unknown [S]	1.85
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.85
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.85
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.85
COG1945	Pyruvoyl-dependent arginine decarboxylase	Amino acid transport and metabolism [E]	0.93
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.93
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.93
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG1518	CRISPR-Cas system-associated integrase Cas1	Defense mechanisms [V]	0.93
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.93
COG0760	Peptidyl-prolyl isomerase, parvulin family	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.93
COG5520	O-Glycosyl hydrolase	Cell wall/membrane/envelope biogenesis [M]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.85 %
Unclassified	root	N/A	23.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.85 %
Unclassified	root	N/A	23.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.85 %
Unclassified	root	N/A	23.15 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.67 %
Unclassified	root	N/A	23.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.44 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.59 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.48 %
Acidobacteria bacterium 21-70-11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 21-70-11	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.48 %
Acidobacteria bacterium 21-70-11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 21-70-11	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.59 %
Acidobacteria bacterium 21-70-11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 21-70-11	1.85 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.59 %
Acidobacteria bacterium 21-70-11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 21-70-11	1.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002914\|JGI25617J43924_10108961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300002917\|JGI25616J43925_10080906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1361	Open in IMG/M
3300004080\|Ga0062385_10887649	Not Available	590	Open in IMG/M
3300004091\|Ga0062387_100467866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300004091\|Ga0062387_101383253	Not Available	559	Open in IMG/M
3300004092\|Ga0062389_100315721	Not Available	1639	Open in IMG/M
3300004092\|Ga0062389_100991949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300004633\|Ga0066395_10167433	All Organisms → cellular organisms → Bacteria → Acidobacteria	1127	Open in IMG/M
3300005332\|Ga0066388_100013430	All Organisms → cellular organisms → Bacteria	6631	Open in IMG/M
3300005332\|Ga0066388_100049954	All Organisms → cellular organisms → Bacteria	4280	Open in IMG/M
3300005332\|Ga0066388_100285267	All Organisms → cellular organisms → Bacteria	2294	Open in IMG/M
3300005332\|Ga0066388_103198633	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005332\|Ga0066388_104897319	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300005332\|Ga0066388_108682879	Not Available	505	Open in IMG/M
3300005436\|Ga0070713_100600425	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300005437\|Ga0070710_10612891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300005764\|Ga0066903_101607877	Not Available	1233	Open in IMG/M
3300005764\|Ga0066903_102525025	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300005764\|Ga0066903_108396959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300005995\|Ga0066790_10068253	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300006028\|Ga0070717_11307258	Not Available	659	Open in IMG/M
3300006050\|Ga0075028_100145266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1248	Open in IMG/M
3300006173\|Ga0070716_100910598	Not Available	689	Open in IMG/M
3300006893\|Ga0073928_10008205	All Organisms → cellular organisms → Bacteria	13201	Open in IMG/M
3300009792\|Ga0126374_10241271	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300009792\|Ga0126374_11342720	Not Available	579	Open in IMG/M
3300010043\|Ga0126380_10542988	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300010043\|Ga0126380_11921737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010046\|Ga0126384_11744181	Not Available	590	Open in IMG/M
3300010048\|Ga0126373_10033774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4446	Open in IMG/M
3300010048\|Ga0126373_10035588	All Organisms → cellular organisms → Bacteria	4339	Open in IMG/M
3300010048\|Ga0126373_10107135	All Organisms → cellular organisms → Bacteria	2595	Open in IMG/M
3300010048\|Ga0126373_10274726	All Organisms → cellular organisms → Bacteria → Acidobacteria	1669	Open in IMG/M
3300010048\|Ga0126373_11174807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300010048\|Ga0126373_12012156	Not Available	640	Open in IMG/M
3300010341\|Ga0074045_10053925	All Organisms → cellular organisms → Bacteria	2898	Open in IMG/M
3300010358\|Ga0126370_10023812	All Organisms → cellular organisms → Bacteria → Acidobacteria	3570	Open in IMG/M
3300010358\|Ga0126370_10030404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 21-70-11	3243	Open in IMG/M
3300010361\|Ga0126378_10097418	All Organisms → cellular organisms → Bacteria	2894	Open in IMG/M
3300010361\|Ga0126378_10231609	All Organisms → cellular organisms → Bacteria → Acidobacteria	1935	Open in IMG/M
3300010361\|Ga0126378_11656564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300010361\|Ga0126378_12975481	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300010362\|Ga0126377_13239709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300010366\|Ga0126379_10397375	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300010366\|Ga0126379_10487860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1301	Open in IMG/M
3300010366\|Ga0126379_12151964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300010376\|Ga0126381_100049822	All Organisms → cellular organisms → Bacteria → Proteobacteria	5121	Open in IMG/M
3300010376\|Ga0126381_100054009	All Organisms → cellular organisms → Bacteria	4934	Open in IMG/M
3300010376\|Ga0126381_100161731	All Organisms → cellular organisms → Bacteria	2953	Open in IMG/M
3300010376\|Ga0126381_100592852	All Organisms → cellular organisms → Bacteria → Acidobacteria	1576	Open in IMG/M
3300010376\|Ga0126381_101046797	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300010376\|Ga0126381_102855729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300010376\|Ga0126381_103264876	Not Available	640	Open in IMG/M
3300010376\|Ga0126381_104614877	Not Available	531	Open in IMG/M
3300012189\|Ga0137388_10715811	Not Available	929	Open in IMG/M
3300012363\|Ga0137390_10452539	All Organisms → cellular organisms → Bacteria → Acidobacteria	1260	Open in IMG/M
3300012923\|Ga0137359_11147795	Not Available	664	Open in IMG/M
3300012971\|Ga0126369_10085668	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300014501\|Ga0182024_10021049	All Organisms → cellular organisms → Bacteria	11869	Open in IMG/M
3300016270\|Ga0182036_10263215	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300016387\|Ga0182040_11418574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	588	Open in IMG/M
3300016422\|Ga0182039_10237590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1477	Open in IMG/M
3300017959\|Ga0187779_10294863	All Organisms → cellular organisms → Bacteria → Acidobacteria	1036	Open in IMG/M
3300017961\|Ga0187778_10077217	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M
3300017966\|Ga0187776_10022011	All Organisms → cellular organisms → Bacteria	3498	Open in IMG/M
3300017972\|Ga0187781_10647707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300017973\|Ga0187780_10029722	All Organisms → cellular organisms → Bacteria	3860	Open in IMG/M
3300017974\|Ga0187777_10048837	All Organisms → cellular organisms → Bacteria	2726	Open in IMG/M
3300018037\|Ga0187883_10035846	All Organisms → cellular organisms → Bacteria	2668	Open in IMG/M
3300018058\|Ga0187766_10326686	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300020579\|Ga0210407_10333806	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300020581\|Ga0210399_10038185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3843	Open in IMG/M
3300021088\|Ga0210404_10025780	All Organisms → cellular organisms → Bacteria	2582	Open in IMG/M
3300021088\|Ga0210404_10576195	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300021168\|Ga0210406_10028019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5129	Open in IMG/M
3300021420\|Ga0210394_10737030	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300021432\|Ga0210384_10009424	All Organisms → cellular organisms → Bacteria	10072	Open in IMG/M
3300021475\|Ga0210392_10475646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300021478\|Ga0210402_10551635	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300021559\|Ga0210409_10573009	Not Available	996	Open in IMG/M
3300021560\|Ga0126371_10025331	All Organisms → cellular organisms → Bacteria	5511	Open in IMG/M
3300021560\|Ga0126371_10080468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 21-70-11	3195	Open in IMG/M
3300021560\|Ga0126371_10144221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2436	Open in IMG/M
3300021560\|Ga0126371_10461747	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300021560\|Ga0126371_10937732	All Organisms → cellular organisms → Bacteria → Acidobacteria	1009	Open in IMG/M
3300022557\|Ga0212123_10010077	All Organisms → cellular organisms → Bacteria	13498	Open in IMG/M
3300025939\|Ga0207665_10264742	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300026551\|Ga0209648_10000875	All Organisms → cellular organisms → Bacteria → Acidobacteria	23996	Open in IMG/M
3300027591\|Ga0209733_1108328	Not Available	696	Open in IMG/M
3300027698\|Ga0209446_1036721	All Organisms → cellular organisms → Bacteria → Acidobacteria	1231	Open in IMG/M
3300027898\|Ga0209067_10640171	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	613	Open in IMG/M
3300027911\|Ga0209698_10926930	Not Available	652	Open in IMG/M
3300028536\|Ga0137415_10555808	All Organisms → cellular organisms → Bacteria → Acidobacteria	957	Open in IMG/M
3300031057\|Ga0170834_103768778	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300031753\|Ga0307477_10004204	All Organisms → cellular organisms → Bacteria	10516	Open in IMG/M
3300031833\|Ga0310917_10575988	Not Available	765	Open in IMG/M
3300031833\|Ga0310917_10679434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300031890\|Ga0306925_10897003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300031912\|Ga0306921_10161725	All Organisms → cellular organisms → Bacteria	2621	Open in IMG/M
3300031912\|Ga0306921_10287804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1924	Open in IMG/M
3300032076\|Ga0306924_11397967	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.04%
Aquatic	Environmental → Aquatic	11.11%
Plants	Host-Associated → Plants	1.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.04%
Freshwater	Environmental → Aquatic → Freshwater	6.48%
Sediment	Environmental → Aquatic → Sediment	2.78%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.11%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	34.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.78%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015921912	3300000364	Soil	MSHLYIVVSCKTKGCHAVHVLMHLGEKGKAPEKVAYWMSCPLLLYCPNCEKNYDYSDSEEQFRQAELPAPPVGYLDRLATPPIHGSASLMNAGHA*
JGI25617J43924_101089612	3300002914	Grasslands Soil	MHLYIVVDCKTENCRTVHVLMQLGEKGKTPAKVEYWMAYPLMVPCPTCGRIYDYSDAEDKFWQKELPSPPLGYSDRLAPPPVHNAFPSAEN*
JGI25616J43925_100809063	3300002917	Grasslands Soil	MNLYIVVDCKTHNCRTVHVLMHLGEKGKTPAKVEYWMSYPLMVDCPTCGKTYDYSDSQENFWQKELPAPPSGYSNRLAPPSVQNEFIQKKTDILRLN*
Ga0062385_108876491	3300004080	Bog Forest Soil	HLYILVDCKTASCGTAHVLTYLGEKGKTPARVEYWMSYPLMIDCPTCGLTYDYSDSEEKFRQKELPLAPPSKYFNRLALAEFLNRSPTAGS*
Ga0062387_1004678662	3300004091	Bog Forest Soil	MHLYIVVGCKTQNCRTVHVLMHLGEKGKTPAKVEYWMSYPLMVDCPTCGRTYDYSDSEERFCQKELPPPPPGYSNRLALPTVLNDCTSEKN*
Ga0062387_1013832531	3300004091	Bog Forest Soil	VHLYILVDCKTASCGTAHVLTYLGEKGKTPARVEYWMSYPLMIDCPTCGLTYDYSDSEEKFRQKELPLAPPSKYFNRLALAEFLNRSPTAGS*
Ga0062389_1003157211	3300004092	Bog Forest Soil	ESEQARPVHLYILVDCKTASCGTAHVLTYLGEKGKTPARVEYWMSYPLMIDCPTCGLTYDYSDSEEKFRQKELPLAPPSKYFNRLALAEFLNRSPTAGS*
Ga0062389_1009919492	3300004092	Bog Forest Soil	MYFCLDGHSMHLYIVVGCKTQNCRTVHVLMHLGEKGKTPAKVEYWMSYPLMVDCPTCGRTYDYSDSEERFCQKELPPPPPGYSNRLALPTVLNDCTSEKN*
Ga0066395_101674332	3300004633	Tropical Forest Soil	MHLYIVVGCKTRNCKTAHILMHLGEKGQTPSRMEYWMSYPLMIECPTCGKTYDYSDAEESFWQKELPAPPAGHLDRLAGPE*
Ga0066395_108758531	3300004633	Tropical Forest Soil	MSVTHLYIVVRCKTAGCEAVHLLKHLGEKGKTPKNVEYWMCYPLVICCPNCGQLYDYSDSEERFQQSELPAPPVGYFDRLAAPRISSIDTPVRFNN*
Ga0066388_1000134307	3300005332	Tropical Forest Soil	MHLYIVVNCKSPNCRTVHVLMHLGETGKTKDKIEYWMPFPLVIDCPTCNKVYDYSDSEEKFWQKELPTPPAGHINRLARHLNPDGEFLDAN*
Ga0066388_1000499542	3300005332	Tropical Forest Soil	VTHLYIVVDCKTHNCKAAHVLMHLGEKGQTETRVEYWMMYPLVLDCPTCGQVYDYSDSEDKFRQKELPAPPPGYFDRLVRGIAGDA*
Ga0066388_1002852672	3300005332	Tropical Forest Soil	MNHLYIVVGCRTKSCYTVHVLMHLGEKGKIPERVQYWMSYPLIIHCPTCGKIYDYSDSEEEFRQTALPAPPPGYLDRLGPTLYHTDSVTKSWRA*
Ga0066388_1031986333	3300005332	Tropical Forest Soil	CRTAHVLTYLGEKGKTPVTVEYWMSYPLMIDCPTCGETYDYSDSEDKFAQKELPLAPPFEWFNRLALPKFLTTAPTAAS*
Ga0066388_1048973191	3300005332	Tropical Forest Soil	MNHLYIVVHCETAGCNAVHVLKDLGEKGKMPDRVEYWMCYPLLIDCPTCGKTQDYSDSEEKFRQTELPAPPAGYFDRLAAPPLHDNDSFLKLGNA*
Ga0066388_1086828792	3300005332	Tropical Forest Soil	MNVALTHLYIVVDCKTHNCKAAHVLLYLGEKGRTPPRVEYWMPYPLMIACPMCGNIYDYSDSEESFCQRELPAPPQSHFDRLARPS
Ga0070713_1006004252	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKVLVVHLYIVVGCKSDNCNATHLLMHLGEKGRTPARVEYWMPYPLMIECPICGEAYDYSDCEERFSQKELPAPPTGYFNRLAAPFELS*
Ga0070710_106128912	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VHLYIVVGCKSDNCNATHLLMHLGEKGGRTPARVEYWMPYPLMIECPICGEAYDYSDCEERFSQKELPAPPTGYFNRLAAPFELS*
Ga0066903_1000066864	3300005764	Tropical Forest Soil	VTHLYIVVRCKTAGCEAVHLLKHLGEKGKTPKNVEYWMCYPLVICCPNCGQLYDYSDSEERFQQSELPAPPVGYFDRLAAPRISSIDTPVRFNN*
Ga0066903_1016078773	3300005764	Tropical Forest Soil	MHLYIVVDCKTTNCRTAHVLTYLGEKGKTPVTVEYWMSYPLMIDCPACGKTYDYSDSEDKFAQKELPLAPPFEWFNRLALPKFLTTAPTAAS*
Ga0066903_1025250252	3300005764	Tropical Forest Soil	MYLYIVVDCKTANCRTAHVLTYLGEKGKTPASVEYWMSYPLMIDCPTCGRSYDYSDSEESFRQKELPLAPPAEYLNRLGEPQAWESVPARFDNKSDA*
Ga0066903_1083969591	3300005764	Tropical Forest Soil	MHLYIVVDCKTHNCKTVHVLMHLGEKGRTPATVKYWMSYPFLLSCPTCGNTYDYSDTEQKFWQRELPAPPPGYFDRLAGPPWRCDS
Ga0066790_100682532	3300005995	Soil	MHLYIVVNCKTRDCRTVHVLMHFGEEGKTSPKVEYWMSYPLIVDCPNCGKTYDYSDAEEQFRQEELPPLPDGYSNRLAPPPVRSGFPSE
Ga0070717_113072581	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MHLYIVVNRKTHLCKTVHVLMHIGEKRRMPASIEYWMPLPLTIECPTCGSSYDYSDAEEKFWQKELPPPPRGYFNRLAVFQ*
Ga0075028_1001452662	3300006050	Watersheds	MNHLYIVVGCKTAGCNAAHVLMHLGENGKGPAKVEYWMCYPLMVDCPTCGKTYDYSDSEERFRQKELPAPPAGYLDRLAAPPIQDMHSLPQSGRA*
Ga0070716_1009105982	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VHLYIVVGCKSDNCNATHLLMHLGEKGRTPARVEYWMPYPLMIECPICGEAYDYSDCEERFSQKELPAPPTGYFNRLAAPFELS*
Ga0073928_1000820510	3300006893	Iron-Sulfur Acid Spring	MHLYIVVDCKTENCRTVHVLMHLAEKGKTPAKVEYWMSYPLILDCPSCGKAYDYSDIEEKFWQKELPPPPVGYWNRLVLPTVQDTFASEEN*
Ga0126374_102412713	3300009792	Tropical Forest Soil	MHLYIVVGCKTRNCKTAHVLMHLGEKGQTPSTMEYWMSYPLMIECPTCGKTYDYSDSEDSFWQKELPAPPAGHLDRLAGPE*
Ga0126374_113427201	3300009792	Tropical Forest Soil	MNHLYIVVRCKTEACGVFHVLMHLGKKGMTPQRVEYWMSYPLMLACPKCGKTYDYSDAEDQFCQKELPAPPAGYFDRLAAPPSYDSESAVVA*
Ga0126380_105429883	3300010043	Tropical Forest Soil	MHLYIVVDCKTTNCRTAHVLTYLGEKDKTPVTVEYWMSYPLMIDCPACGKTYDYSDSEDKFRQKELPLAPPFECFNRLALPKFLNPAPTAA
Ga0126380_119217371	3300010043	Tropical Forest Soil	MMHLYIVVACKTPKCKSVHVLMHLGEKGQTEARVEYWMMYPLVLECPTCGKVYDYSDSEDKFRQKELPAPPPGYFDRLVRAIAGDA*
Ga0126384_117441812	3300010046	Tropical Forest Soil	MHLYIVVDCKTTNCRTAHVLTYLGEKGKTPVTVEYWMSYPLMIDCPACGKTYDYSDSEDKFRQKELPLAPPFECFNRLALPKFLNPAPTAAS*
Ga0126373_100337742	3300010048	Tropical Forest Soil	MHLYIVVDCKTEHCRTVHVLKYLGEKSKTPASVEYWMSYPLMIGCPKCGQSYDYSDSEEKFRQKELPLAPPAEYWNRLSEPQAWEASPTEES*
Ga0126373_100355883	3300010048	Tropical Forest Soil	MNLYIVVDCKTPNCRAAHVLMHLGEKSNAAERVEYWMSYPLMIECAICGKSYDYSDCEGKFRQQELPPPPPRHLNRLGSPLFLEEPATHDKSRF*
Ga0126373_101071353	3300010048	Tropical Forest Soil	VNEQMGEMHLYVVVDCKTENCRTVHVLTYLGEKGKTPASVEYWMSYPLMIDCPTCGQSYDYSDSEEKFRQKELPLAPPPEYLNRLGELQAWERSPTQEH*
Ga0126373_102747262	3300010048	Tropical Forest Soil	MYLYIVVDCKTANCRTAHVLTYLGEKGKTPASVEYWMSYPLMIDCPTCGRSYDYSDSEENFRQKELPLAPPAEYLNRLGEPQAWESVPARFDNKSDA*
Ga0126373_111748072	3300010048	Tropical Forest Soil	MHLYIVVDCKTTNCRTAHVLTYLGEKDKTPVTVEYWMSYPLMIDCPACGKTYDYSDSEDKFRQKELPLAPPFECFNRLALPKFLNPAPTAAS*
Ga0126373_120121562	3300010048	Tropical Forest Soil	MHLYIVVNCKTDRCNAVHVLMHLGEKGKTAPRVEYWMSYPLILTCPTCGQEYDYSDSEENFRQEELPAPPTGYLDRLSPLMVRGAPWNAN*
Ga0074045_100539254	3300010341	Bog Forest Soil	VESEQARPVHLYILVDCKTASCGTAHVLTYLGEKGKTPARVEYWMSYPLMIDCPTCGLTYDYSDSEEKFRQKELPLAPPSKYFNRLALAEFLNRSPTAGS*
Ga0126370_100238124	3300010358	Tropical Forest Soil	MHLYIVVDCKTTNCRTAHVLTYLGEKGKTPVTVEYWMSYPLMIDCPTCGETYDYSDSEDKFAQKELPLAPPFEWFNRLALPKFLTTAPTAAS*
Ga0126370_100304041	3300010358	Tropical Forest Soil	MHLYIVVNCKTRDCKTAHVLMHLGEKGRTPERVEYWMSYPLMIECPICRKTYDYSDSEESFSQRELPAPPPGHSNRLARP*
Ga0126378_100974184	3300010361	Tropical Forest Soil	MHLYIVVDCKTEHCRTVHLLKYLGEKSKTPASVEYWMSYPLMIGCPKCGQSYDYSDSEEKFRQKELPLAPPAEYWNRLSEPQAWEASPTEES*
Ga0126378_102316092	3300010361	Tropical Forest Soil	MHLYIVVDCKTTNCRTAHVLTYLGEKDKTPVTVEYWMSYPLMIDCPTCGKTYDYSDSEDKFRQKELPLAPPFECFNRLALPKFLNTAPTAAS*
Ga0126378_116565641	3300010361	Tropical Forest Soil	PMHLYIVVDCKTTNCRTAHVLTYLGEKGKTPVTVEYWMSYPLMIDCPACGKTYDYSDSEDKFAQKELPLAPPFEWFNRLALPKFLTTAPTAAS*
Ga0126378_129754812	3300010361	Tropical Forest Soil	MHLYIVVGCKTSNCKTAHVLMHLGEKGQTPPTVEYWMSYPLLIECPICGNIYDYSDSEESFCQRELPAPPKDHFDRPARPNQQNETCR*
Ga0126377_132397092	3300010362	Tropical Forest Soil	VTHLYIVVDCKTHNCKAAHVLMHLGENGQTGTRVEYWMMYPLVLDCPTCGHVYDYSDSEDKFRQKELPAPPPGYFDR
Ga0126379_103973752	3300010366	Tropical Forest Soil	VNEEKGGTHPMHLYIVVDCKTTNCRTAHVLTYLGEKGKTPVTVEYWMSYPLMIDCPTCGETYDYSDSEDKFAQKELPLAPPFEWFNRLALPKFLTTAPTAAS*
Ga0126379_104878602	3300010366	Tropical Forest Soil	MNHLYIVVHCETAGCNAVHVLKDLGEKGKMPDRVEYWMCYPLLIDCPTCGKTQDYSDSEEKFRQTELPAPPAGYFDRLAAPPLHDNDSFLKLGGA*
Ga0126379_121519642	3300010366	Tropical Forest Soil	MHLYIVVNCKSPNCRTVHVLMHLGDSGKTKDKIEYWMPYPLVIDCPTCSRVYDYSDSEEKFWLKELPAPPAGHMNRLLRHSNPDG
Ga0126381_1000498226	3300010376	Tropical Forest Soil	MNVVMGHLYIVVDCKTHNCKAAHVLMHLGETGRTPARVKYWMSYPLMIECPICGNVYDYSDSEERFCQRELPPPPADHCDRLARPD*
Ga0126381_1000540094	3300010376	Tropical Forest Soil	MKAAVMHLYIIVECKSHNCNAAHVLMHLGEKGNTPPRVDYWMPYPLMIECPICSTTYDYSDSEERFSQKELPAPPIGYFDRLAVPH*
Ga0126381_1001617312	3300010376	Tropical Forest Soil	MNLYIVVDCQTPNCGTTHVLRHLGEKGATPSKVEYWMSYPLIIECPSCGWSYDYSNSETQFRQAELPAPPPGHLDRLAPPSFSKGSKNRSDEEN*
Ga0126381_1005928522	3300010376	Tropical Forest Soil	MHLYIVVNCKSPNCRTVHVLMHLGDSGKTKDKIEYWMPYPLVIDCPTCSRVYDYSDSEEKFWLKELPAPPAGHMNRLLRHSNPDGELLDAN*
Ga0126381_1010467972	3300010376	Tropical Forest Soil	MHLYIVVNCKSPNCRTVHVLMHLGESGKTRDKIEYWMPYPLVIDCPTCSKVYDYSDSEGKFWQKELPAPPAGHINRLARHSNPDGELLDAN*
Ga0126381_1012812452	3300010376	Tropical Forest Soil	MSVTHLYIVVRCKTAGCEAVHLLKHLGEKGKTPKNVEYWMCYPLVICCPNCGQLYDYSDSEERFQQSELPAPPVGYFDRLA
Ga0126381_1028143861	3300010376	Tropical Forest Soil	MNHLYIVVHCETAGCNAVHVLKDLGEKEKTPERVEYWMCYPLLIDCPSCGKSYDYSDSEEKFRQTEL
Ga0126381_1028557291	3300010376	Tropical Forest Soil	VNEQMGEMHLYVVVDCKTENCRTVHVLTYLGEKGKTPASVEYWMSYPLMIDCPTCGQSYDYSDSEEKFRQRELPLAPPPEYLNRLGEPDALKRSPTQEN*
Ga0126381_1032648761	3300010376	Tropical Forest Soil	NEQMGEMHLYVVVDCKTENCRTVHVLTYLGEKEKTPARVEYWMSYPLMIACPTCGQSYDYSDSEEKFRQRELPLAPPPEYLDRLGEPDALERSPAQEN*
Ga0126381_1046148772	3300010376	Tropical Forest Soil	VVNCKSSNYRTVHVLMHLGESGKTKDKIEYWMPYPLVIDCPTCSNVYDYSDLEEKFWEKELPPPPGGHINRLARHSNSGAGLLAAT*
Ga0137388_107158112	3300012189	Vadose Zone Soil	MHLYIVVDCKTHNCRTVHVLMHLGEKGKTPAKIEYWISYPLIVECPTCGKTNDYSDVEGKFCQKELPAPPPGYLNRLAPPQVQDTFTSREH*
Ga0137390_104525391	3300012363	Vadose Zone Soil	VDDRSVHVYIVVGCKTQNCRTVHVLMHLGEKGKTPAKVEYWMSYPLMIDCPTCGRTYDYSDSEEKFWQKELPPPPTGYSNRLAAPPVQNKSTAEEN*
Ga0157345_10568892	3300012498	Arabidopsis Rhizosphere	MSHLYIVVSCKTKGCHAVHVLMHLGEKGKAPEKVAYWMSCPLLLYCPNCEKNYDYSDSEEQFRQAELPAPPVGYL
Ga0137359_111477951	3300012923	Vadose Zone Soil	MHLYIVVDCKTKDCRTVHVLMHLGEKGKTPAKVEYWMSYPLLVDCTTCGRTHDYSDSEEKFWQKELPPPPTGYFNRLAAPLLQNRSTSEPSVQA*
Ga0126369_100856683	3300012971	Tropical Forest Soil	VNEEKGGTHPMHLYIVVDCKTANCRTAHVLTYLGEKGTTPVTVEYWMSYPLMIDCPTCGETYDYSDSEDKFAQKELPLAPPFEWFNRLALPKFLTTAPTAAS*
Ga0182024_100210497	3300014501	Permafrost	VHLYIVGDCKTANCGTAHVLTYLGEKGKTPASVEYWMSYPLMIDCPTCGLTYDYSDSEEKFRQKELPLAPPSEYFNRLGLAEFLNGSTTAGS*
Ga0132256_1003327661	3300015372	Arabidopsis Rhizosphere	SMSHLYIVVSCKTKGCHAVHVLMHLGEKGKAPEKVAYWMSCPLLLYCPNCKKNYDYSDSEEQFRQAKLPAPPVGYLDRLATPPIHGSASLMNAGHA*
Ga0182036_102632152	3300016270	Soil	MHLYIVVHCKTVNCRTAHVLTYLGEKQTASVSVEYWMPYPLMIACPTCGHTYDYSDSEATFTQKELPFPPPSEYLDRLALPSAPSRFPRQGD
Ga0182040_114185742	3300016387	Soil	MHLYIVVNCKTASCRTAHILTYLGEKEKTPASVEYWLSYPLMIACPACGQTYDYSDSEATFTQKELPLAPPSEYLNRLACPIS
Ga0182039_102375902	3300016422	Soil	MHLYIVVNCKTASCRTAHVLTYLGEKEKTPASVEYWLSYPLMIACPACGQTYDYSDSEATFTQKELPLAPPSEYLNR
Ga0187779_102948632	3300017959	Tropical Peatland	MHLYIVVHCKTANCRTARVLTYLGERGTTSVSVDYWMPYPLIIACPICGQAYDYSDSEATFAQKELPVAPPSEYLNR
Ga0187778_100772175	3300017961	Tropical Peatland	MHLYIVVHCKTANCRTARVLTYLGERGTTSVSVDYWMPYPLIIACPTCGQAYDYSDSEATFAQKELPVAPPSEYLNRLALPS
Ga0187776_100220112	3300017966	Tropical Peatland	MHLYIVVDCKTKNCATAHVLLYLGEQGKVPGRVDYWMSYPLLIDCPICRTAYDYCDSEAMFRQKELPLPPPDGYTDRLAGPNDLNGPSSQES
Ga0187781_106477072	3300017972	Tropical Peatland	MPAMYLYIVVDCKTENCRTAHVLTYLGEKGKTPGSVDYWMSYPLMIDCPTCGQSYDYSDSEEKFRQKELPLAPPAEYLNRLGEPQAWETPAQEN
Ga0187780_100297226	3300017973	Tropical Peatland	MHLYIVVHCKTANCRTARVLTYLGERGTTSVSVDYWMPYPLIIACPTCGQAYDYSDSEATFAQKELPVAPPSEYLNRLALPSAPSRFLRQGD
Ga0187777_100488371	3300017974	Tropical Peatland	MHLYIVVHCKTANCRTARVLTYLGERGTTSVSVDYWMPYPLIIACPTCGQAYDYSDSEATFAQKELPVAPPSEYLN
Ga0187883_100358462	3300018037	Peatland	MHLYVVVDCKTKNCGTTHVLTYLGEKGKTPATVEYWMSYPLMTDCPTCGLTYDYSDSEEKFRQKELPLRPPCEYFNRLALPPFLNRSPTAGS
Ga0187766_103266861	3300018058	Tropical Peatland	ARVLTYLGERGTTSVSVDYWMPYPLIIACPTCGQAYDYSDSEATFAQKELPVAPPSEYLNRLALPSAPSRFLRQGD
Ga0210407_103338062	3300020579	Soil	MHLYIVVDCKTHNCRTVHVLMHLGEKGKTPAKVEYWMAYPLMVDCPTCGRTYDYSDAEDKFWQKELPPPPPRYSNRLAPPSVRNKFISQEN
Ga0210399_100381854	3300020581	Soil	LALKYWCGSASRTTCSNSRFMDLYIVVNCKTKDCRTVHVLMHLGEKGKTSARVEYWMSYPLMVDCPTCGKTYDYSDSEEKFRQKELPPPPHGYSNRLALPRVQNRLPSEEN
Ga0210404_100257802	3300021088	Soil	MHLYIVVDCKTQNCRTVHVLMHLGEKGKTPARVKYWMSYPLTVDCPTCGKTYDYSDSEEKFWQKELPPPPNGYSNRLVPPPVQDTFTLEEN
Ga0210404_105761951	3300021088	Soil	MHLYIVVDCKTANCGTAHVLTYLGEKGKTSASVEYRMSYPLMIDCPTCGLTYDYSDSEEKFRQRELPLAPPYEYFN
Ga0210406_100280195	3300021168	Soil	MDLYIVVNCKTKDCRTVHVLMHLGEKGKTSARVEYWMSYPLMVDCPTCGKTYDYSDSEEKFRQKELPPPPHGYSNRLALPRVQNRLPSEEN
Ga0210394_107370302	3300021420	Soil	MCNQRRNDQTETVDRGSPLHLYIVVDCKTKSCRADHVLTYFGEKGMIPTSVEYWMSYPLLIECPICGNTYDYSDSEETFRQMELPLAPPFEHFNRLALPES
Ga0210384_100094248	3300021432	Soil	MHLYIVVDCKTHNCRTVHVLMYLGEKGKTPGSVEYWMSYPLMVDCPTCGKTYDYSDAEGKFWQKELPAPPPGYSNRLAPPPVQDTFASEEK
Ga0210392_104756461	3300021475	Soil	MHLYIVVNCKTPNCRTGHVLMHLGERGKTPEKVEYWMSYPLMVDCPTCGKTYDYSDSEEKFWQKELPRPPNGYSNRLGPLPVENKLTSEEN
Ga0210402_105516352	3300021478	Soil	MDLYIVVNCKTKDCRTVHVLMHLGEKGKTSARVEYRMSYPLMVDCPTCGKTYDYSDSEEKFRQKELPPPPHGYSNRLALPRVQNRLPSEEN
Ga0210409_105730091	3300021559	Soil	TANCGTAHVLTYLGEKGKTSARVEYWMSYPLMIDCPTCGLTYDYSDSEEKFRQRELPLAPPYEYFNRLVVAPLVNGSPTAGS
Ga0126371_100253317	3300021560	Tropical Forest Soil	MHLYIVVNCKSPNCRTVHVLMHLGETGKTKDKIEYWMPFPLVIDCPTCNKVYDYSDSEEKFWQKELPTPPAGHINRLARHLNPDGEFLDAN
Ga0126371_100804681	3300021560	Tropical Forest Soil	MHLYIVVNCKTRDCKTAHVLMHLGEKGRTPERVEYWMSYPLMIECPICRKTYDYSDSEESFSQRELPAPPPGHSNRLARP
Ga0126371_101442211	3300021560	Tropical Forest Soil	MHLYIVVDCKTEHCRTVHVLKYLGEKSKTPASVEYWMSYPLMIGCPKCGQSYDYSDSEEKFRQKELPLAPPAEYWNRLSEPQAWEASPTEES
Ga0126371_104617472	3300021560	Tropical Forest Soil	MHLYIVVHCKTQSCNATHVLMHLGEKGKILPRVDYWMPYPLMIKCPICGNLYDYSDSEERFCQRELPAPPTGHFDRLARPSYPPN
Ga0126371_109377321	3300021560	Tropical Forest Soil	MDEMHLYVVVDCKTENCRTVHVLTYLGEKGKTPASVEYWMSYPLMIDCPTCGQSYDYSDSEEKFRQRELPLAPPPEYLNRLGEPDALERSPAQEN
Ga0212123_1001007712	3300022557	Iron-Sulfur Acid Spring	MHLYIVVDCKTENCRTVHVLMHLAEKGKTPAKVEYWMSYPLILDCPSCGKAYDYSDIEEKFWQKELPPPPVGYWNRLVLPTVQDTFASEEN
Ga0207665_102647422	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VHLYIVVGCKSDNCNATHLLMHLGEKGRTPARVEYWMPYPLMIECPICGEAYDYSDCEERFSQKELPAPPTGYFNRLAAPFELS
Ga0209648_1000087512	3300026551	Grasslands Soil	MHLYIVVDCKTENCRTVHVLMQLGEKGKTPAKVEYWMAYPLMVPCPTCGRIYDYSDAEDKFWQKELPSPPLGYSDRLAPPPVHNAFPSAEN
Ga0209733_11083282	3300027591	Forest Soil	MHLYIVVDCMTKNCATAHVLTYLGEKGKTPASVESWMSYPLMIECPACGKTYDYSDSEERLRQKELPLAPLTGYANRLAGPAENEALSSG
Ga0209446_10367211	3300027698	Bog Forest Soil	VESEQARPVHLYILVDCKTASCGTAHVLTYLGEKGKTPARVEYWMSYPLMIDCPTCGLTYDYSDSEEKFRQKELPLAPPSKYFNRLALAEFLNRSPTAGS
Ga0209067_106401712	3300027898	Watersheds	KTKNCSTAHVLTYLGEKGKTPASVEYWMSYPLMIGCPACGKTYDYADSEETFQQKELPLAPPTGYANRLAGPGENETCSSG
Ga0209698_109269301	3300027911	Watersheds	MHLYIVVGCKTKNCSTAHVLIYLGGKGKTPASVEYWMSYPLMIGCPACGKTYDYADSEGTFQQKELRLAPPTGYANRLAGIGENETFSSGCLQN
Ga0137415_105558081	3300028536	Vadose Zone Soil	NCGTAHILKYLGEKGKTSASVEYWMSYPLMIDCPTCGLSYDYSDSEEKFRQRELPLAPPYEYFNRLAVAPLVNGSPTAGS
Ga0170834_1037687782	3300031057	Forest Soil	LEMTHNVVDCKTQGCRTVHVLMHLGEKRKTPPKVAYWMSYPLMIDCPTCGNTYDYSNTEEAFWQKELPPPPPEYSNRLAAP
Ga0307477_100042043	3300031753	Hardwood Forest Soil	MHLYIVVDCKTHNCRTVHVLLHLGEKEKMPAQVEYWMSYPLMVDCPTCGKTYDYSDAEDTFWQKELPAPPPGFFSRLAGPALNESLAEEN
Ga0310917_105759881	3300031833	Soil	VVNCKTASCRTAHVLTYLGEKEKTPASVEYWLSYPLMIACPACGQTYDYSDSEATFTQKELPLAPPSEYLNRLACPISPD
Ga0310917_106794342	3300031833	Soil	VMHLYIVVHCKTVNCRTAHVLTYLGEKQTASVSVEYWMPYPLMIACPTCGHTYDYSDSEATFTQKELPFPPPSEYLDRLALPSAPSRFPRQGD
Ga0306925_108970031	3300031890	Soil	MHLYIVVHCKTVNCRTAHVLTYLGERQTASVSVEYWMPYPLMIACPTCGHTYDYSDSEATFTQKELPFPPPSEYLDRLALPSAPSRFPRQGGLMRTH
Ga0306921_101617252	3300031912	Soil	MHLYIVVHCKTVNCRTAHVLTYLGERQTASVSVEYWMPYPLMIACPTCGHTYDYSDSEATFTQKELPFPPPSEYLDRLALPSAPSRFPRQGD
Ga0306921_102878044	3300031912	Soil	MHLYIVVNCKTASCRTAHVLTYLGEKEKTPASVEYWLSYPLMIACPACGQTYDYSDSEATFTQKELPLAPPSEYLNRLACPISPD
Ga0306924_113979672	3300032076	Soil	MNLYIVVDCQTPNCGTTHVLRHLGEKGAAPSKVEYWMSYPLIIECPSCGWSYDYSNSETQFRQAELPAPPPGHLDRLAPPSFSKGSENRSDEEN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090778

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with PDB biological assemblies

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences