Basic Information | |
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Family ID | F090764 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 108 |
Average Sequence Length | 102 residues |
Representative Sequence | VATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK |
Number of Associated Samples | 92 |
Number of Associated Scaffolds | 108 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 53.70 % |
% of genes near scaffold ends (potentially truncated) | 35.19 % |
% of genes from short scaffolds (< 2000 bps) | 97.22 % |
Associated GOLD sequencing projects | 84 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (73.148 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.889 % of family members) |
Environment Ontology (ENVO) | Unclassified (37.037 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (47.222 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 68.69% β-sheet: 0.00% Coil/Unstructured: 31.31% | Feature Viewer |
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Pfam ID | Name | % Frequency in 108 Family Scaffolds |
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PF13560 | HTH_31 | 43.52 |
PF01381 | HTH_3 | 9.26 |
PF00561 | Abhydrolase_1 | 3.70 |
PF00108 | Thiolase_N | 2.78 |
PF07167 | PhaC_N | 1.85 |
PF01965 | DJ-1_PfpI | 1.85 |
PF00557 | Peptidase_M24 | 0.93 |
PF07478 | Dala_Dala_lig_C | 0.93 |
PF00887 | ACBP | 0.93 |
PF00005 | ABC_tran | 0.93 |
COG ID | Name | Functional Category | % Frequency in 108 Family Scaffolds |
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COG0183 | Acetyl-CoA acetyltransferase | Lipid transport and metabolism [I] | 2.78 |
COG3243 | Poly-beta-hydroxybutyrate synthase | Lipid transport and metabolism [I] | 1.85 |
COG4281 | Acyl-CoA-binding protein | Lipid transport and metabolism [I] | 0.93 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 73.15 % |
Unclassified | root | N/A | 26.85 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2124908044|A5_c1_ConsensusfromContig92094 | All Organisms → cellular organisms → Bacteria | 738 | Open in IMG/M |
3300002568|C688J35102_118036939 | All Organisms → cellular organisms → Bacteria | 524 | Open in IMG/M |
3300002568|C688J35102_120544473 | All Organisms → cellular organisms → Bacteria | 1164 | Open in IMG/M |
3300004006|Ga0055453_10217107 | Not Available | 603 | Open in IMG/M |
3300004081|Ga0063454_100239708 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales | 1074 | Open in IMG/M |
3300004643|Ga0062591_100612299 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales | 965 | Open in IMG/M |
3300005093|Ga0062594_100156714 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales | 1504 | Open in IMG/M |
3300005159|Ga0066808_1014710 | All Organisms → cellular organisms → Bacteria | 732 | Open in IMG/M |
3300005162|Ga0066814_10036662 | All Organisms → cellular organisms → Bacteria | 759 | Open in IMG/M |
3300005168|Ga0066809_10018090 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1403 | Open in IMG/M |
3300005169|Ga0066810_10011322 | All Organisms → cellular organisms → Bacteria | 1328 | Open in IMG/M |
3300005439|Ga0070711_101209978 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales | 654 | Open in IMG/M |
3300005548|Ga0070665_101231379 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 759 | Open in IMG/M |
3300005577|Ga0068857_101150209 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 750 | Open in IMG/M |
3300005614|Ga0068856_100510584 | All Organisms → cellular organisms → Bacteria | 1223 | Open in IMG/M |
3300005617|Ga0068859_103010908 | Not Available | 515 | Open in IMG/M |
3300005640|Ga0075035_1471617 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155 | 647 | Open in IMG/M |
3300005646|Ga0075040_1765553 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium | 732 | Open in IMG/M |
3300005764|Ga0066903_100620992 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1880 | Open in IMG/M |
3300006173|Ga0070716_101567811 | Not Available | 540 | Open in IMG/M |
3300006175|Ga0070712_100411694 | All Organisms → cellular organisms → Bacteria | 1119 | Open in IMG/M |
3300006572|Ga0074051_11737489 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 722 | Open in IMG/M |
3300006575|Ga0074053_11631352 | All Organisms → cellular organisms → Bacteria | 607 | Open in IMG/M |
3300006575|Ga0074053_11896576 | All Organisms → cellular organisms → Bacteria | 821 | Open in IMG/M |
3300006576|Ga0074047_12056249 | All Organisms → cellular organisms → Bacteria | 1171 | Open in IMG/M |
3300006606|Ga0074062_12646548 | All Organisms → cellular organisms → Bacteria | 776 | Open in IMG/M |
3300006755|Ga0079222_11055314 | All Organisms → cellular organisms → Bacteria | 707 | Open in IMG/M |
3300006881|Ga0068865_101172957 | All Organisms → cellular organisms → Bacteria | 679 | Open in IMG/M |
3300006954|Ga0079219_11272901 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 644 | Open in IMG/M |
3300009012|Ga0066710_103529721 | Not Available | 591 | Open in IMG/M |
3300009098|Ga0105245_10183586 | All Organisms → cellular organisms → Bacteria | 2000 | Open in IMG/M |
3300009098|Ga0105245_10500541 | All Organisms → cellular organisms → Bacteria | 1231 | Open in IMG/M |
3300009098|Ga0105245_11734593 | Not Available | 677 | Open in IMG/M |
3300009148|Ga0105243_10359794 | All Organisms → cellular organisms → Bacteria | 1339 | Open in IMG/M |
3300009148|Ga0105243_11514913 | All Organisms → cellular organisms → Bacteria | 695 | Open in IMG/M |
3300009411|Ga0115017_1021768 | All Organisms → cellular organisms → Bacteria | 522 | Open in IMG/M |
3300009551|Ga0105238_11644245 | Not Available | 673 | Open in IMG/M |
3300009553|Ga0105249_11845832 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 677 | Open in IMG/M |
3300009840|Ga0126313_10463645 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium | 1011 | Open in IMG/M |
3300010039|Ga0126309_10615812 | All Organisms → cellular organisms → Bacteria | 685 | Open in IMG/M |
3300010403|Ga0134123_10518056 | All Organisms → cellular organisms → Bacteria | 1127 | Open in IMG/M |
3300010856|Ga0126358_1108751 | All Organisms → cellular organisms → Bacteria | 601 | Open in IMG/M |
3300010861|Ga0126349_1214206 | All Organisms → cellular organisms → Bacteria | 837 | Open in IMG/M |
3300010862|Ga0126348_1009199 | All Organisms → cellular organisms → Bacteria | 937 | Open in IMG/M |
3300010862|Ga0126348_1209801 | Not Available | 505 | Open in IMG/M |
3300012014|Ga0120159_1177160 | Not Available | 577 | Open in IMG/M |
3300012212|Ga0150985_103514167 | All Organisms → cellular organisms → Bacteria | 593 | Open in IMG/M |
3300012212|Ga0150985_109297601 | All Organisms → cellular organisms → Bacteria | 672 | Open in IMG/M |
3300012212|Ga0150985_113555746 | Not Available | 533 | Open in IMG/M |
3300012212|Ga0150985_122566481 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 769 | Open in IMG/M |
3300012356|Ga0137371_10480533 | All Organisms → cellular organisms → Bacteria | 960 | Open in IMG/M |
3300012360|Ga0137375_10950853 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 679 | Open in IMG/M |
3300012371|Ga0134022_1130682 | All Organisms → cellular organisms → Bacteria | 597 | Open in IMG/M |
3300012469|Ga0150984_111015897 | All Organisms → cellular organisms → Bacteria | 977 | Open in IMG/M |
3300012469|Ga0150984_112872979 | All Organisms → cellular organisms → Bacteria | 621 | Open in IMG/M |
3300012469|Ga0150984_116279562 | All Organisms → cellular organisms → Bacteria | 804 | Open in IMG/M |
3300012955|Ga0164298_11061488 | All Organisms → cellular organisms → Bacteria | 603 | Open in IMG/M |
3300012955|Ga0164298_11285451 | Not Available | 559 | Open in IMG/M |
3300012960|Ga0164301_11443381 | Not Available | 564 | Open in IMG/M |
3300012960|Ga0164301_11465133 | Not Available | 561 | Open in IMG/M |
3300012984|Ga0164309_10533950 | All Organisms → cellular organisms → Bacteria | 904 | Open in IMG/M |
3300012986|Ga0164304_10477162 | All Organisms → cellular organisms → Bacteria | 905 | Open in IMG/M |
3300012987|Ga0164307_11486239 | Not Available | 572 | Open in IMG/M |
3300012988|Ga0164306_10750728 | All Organisms → cellular organisms → Bacteria | 781 | Open in IMG/M |
3300012989|Ga0164305_11387875 | All Organisms → cellular organisms → Bacteria | 618 | Open in IMG/M |
3300013306|Ga0163162_10431860 | All Organisms → cellular organisms → Bacteria | 1449 | Open in IMG/M |
3300013308|Ga0157375_11192284 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 893 | Open in IMG/M |
3300013766|Ga0120181_1087298 | Not Available | 684 | Open in IMG/M |
3300013772|Ga0120158_10339479 | Not Available | 711 | Open in IMG/M |
3300014058|Ga0120149_1071864 | All Organisms → cellular organisms → Bacteria | 898 | Open in IMG/M |
3300014326|Ga0157380_11560934 | All Organisms → cellular organisms → Bacteria | 715 | Open in IMG/M |
3300014326|Ga0157380_13290468 | Not Available | 517 | Open in IMG/M |
3300014745|Ga0157377_10908957 | All Organisms → cellular organisms → Bacteria | 659 | Open in IMG/M |
3300014969|Ga0157376_11440605 | All Organisms → cellular organisms → Bacteria | 721 | Open in IMG/M |
3300015371|Ga0132258_10030230 | All Organisms → cellular organisms → Bacteria | 12089 | Open in IMG/M |
3300015371|Ga0132258_13013375 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales | 1167 | Open in IMG/M |
3300015373|Ga0132257_100494358 | All Organisms → cellular organisms → Bacteria | 1500 | Open in IMG/M |
3300018476|Ga0190274_10151965 | All Organisms → cellular organisms → Bacteria | 1956 | Open in IMG/M |
3300019263|Ga0184647_1017428 | Not Available | 509 | Open in IMG/M |
3300020076|Ga0206355_1558742 | Not Available | 534 | Open in IMG/M |
3300021947|Ga0213856_1115535 | All Organisms → cellular organisms → Bacteria | 584 | Open in IMG/M |
3300025464|Ga0208076_1013456 | All Organisms → cellular organisms → Bacteria | 1390 | Open in IMG/M |
3300025509|Ga0208848_1054032 | Not Available | 853 | Open in IMG/M |
3300025556|Ga0210120_1091345 | Not Available | 604 | Open in IMG/M |
3300025625|Ga0208219_1045525 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1115 | Open in IMG/M |
3300025905|Ga0207685_10256959 | Not Available | 847 | Open in IMG/M |
3300025927|Ga0207687_10865909 | Not Available | 772 | Open in IMG/M |
3300025927|Ga0207687_11719573 | Not Available | 538 | Open in IMG/M |
3300025934|Ga0207686_10793219 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 759 | Open in IMG/M |
3300025939|Ga0207665_11099187 | Not Available | 634 | Open in IMG/M |
3300025944|Ga0207661_12076353 | Not Available | 514 | Open in IMG/M |
3300025949|Ga0207667_11564704 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 629 | Open in IMG/M |
3300025961|Ga0207712_10866546 | All Organisms → cellular organisms → Bacteria | 797 | Open in IMG/M |
3300026041|Ga0207639_11980584 | All Organisms → cellular organisms → Bacteria | 543 | Open in IMG/M |
3300026075|Ga0207708_11216326 | All Organisms → cellular organisms → Bacteria | 659 | Open in IMG/M |
3300027523|Ga0208890_1009175 | All Organisms → cellular organisms → Bacteria | 1280 | Open in IMG/M |
3300027560|Ga0207981_1010583 | All Organisms → cellular organisms → Bacteria | 1644 | Open in IMG/M |
3300028379|Ga0268266_12128200 | Not Available | 534 | Open in IMG/M |
3300028712|Ga0307285_10092800 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 792 | Open in IMG/M |
3300028754|Ga0307297_10314209 | Not Available | 568 | Open in IMG/M |
3300028812|Ga0247825_11356237 | Not Available | 521 | Open in IMG/M |
3300030785|Ga0102757_11369625 | Not Available | 521 | Open in IMG/M |
3300030997|Ga0073997_11924715 | All Organisms → cellular organisms → Bacteria | 608 | Open in IMG/M |
3300030998|Ga0073996_12351716 | All Organisms → cellular organisms → Bacteria | 543 | Open in IMG/M |
3300031366|Ga0307506_10000926 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 4488 | Open in IMG/M |
3300033502|Ga0326731_1068641 | All Organisms → cellular organisms → Bacteria | 823 | Open in IMG/M |
3300034643|Ga0370545_097958 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 634 | Open in IMG/M |
3300034681|Ga0370546_076662 | All Organisms → cellular organisms → Bacteria | 555 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 13.89% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 10.19% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 7.41% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.56% |
Permafrost | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost | 3.70% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 3.70% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 3.70% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 3.70% |
Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 3.70% |
Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 2.78% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 2.78% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.78% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.78% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 2.78% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 1.85% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.85% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 1.85% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.85% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.85% |
Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 1.85% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.85% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.85% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.85% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.93% |
Watersheds | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds | 0.93% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.93% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.93% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.93% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil | 0.93% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.93% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.93% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.93% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.93% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.93% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.93% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.93% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.93% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.93% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2124908044 | Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5 | Environmental | Open in IMG/M |
3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
3300004006 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 | Environmental | Open in IMG/M |
3300004081 | Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2) | Environmental | Open in IMG/M |
3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005159 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPB | Environmental | Open in IMG/M |
3300005162 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAB | Environmental | Open in IMG/M |
3300005168 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC | Environmental | Open in IMG/M |
3300005169 | Soil and rhizosphere microbial communities from Laval, Canada - mgHPA | Environmental | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005640 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300005646 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_057 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006572 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006575 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006576 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006606 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009411 | Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
3300010039 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300010856 | Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300010861 | Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300010862 | Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300012014 | Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
3300012360 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG | Environmental | Open in IMG/M |
3300012371 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300013766 | Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M | Environmental | Open in IMG/M |
3300013772 | Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M | Environmental | Open in IMG/M |
3300014058 | Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M | Environmental | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300019263 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) | Environmental | Open in IMG/M |
3300021947 | Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - G-2016_32 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300025464 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes) | Environmental | Open in IMG/M |
3300025509 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes) | Environmental | Open in IMG/M |
3300025556 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes) | Environmental | Open in IMG/M |
3300025625 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes) | Environmental | Open in IMG/M |
3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027523 | Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes) | Environmental | Open in IMG/M |
3300027560 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes) | Environmental | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028712 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139 | Environmental | Open in IMG/M |
3300028754 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157 | Environmental | Open in IMG/M |
3300028812 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48 | Environmental | Open in IMG/M |
3300030785 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030997 | Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030998 | Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031366 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S | Environmental | Open in IMG/M |
3300033502 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction | Environmental | Open in IMG/M |
3300034643 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034681 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
A5_c1_01742010 | 2124908044 | Soil | MTTYLELSKTYQEQVLGMIEQNQKVTVDSVSAWAKATQPLAKTTPGVAAIPGVSSPKELIDNAFGFATKLMSAQHQYLTEVFAAAEPAMPKAPATK |
C688J35102_1180369392 | 3300002568 | Soil | PDMATPTSYLELSKTYQEQVLGLIEQSQKLAVEGVSAWTKAVQPIAKNAPAAPIAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVLAAAAPVLPKTAPAAK* |
C688J35102_1205444731 | 3300002568 | Soil | MATATPSYLELSKNYQDQVLSLIEQSQKLAVESVSAWTKAVQPLAKNAPATPVAGVPSPKEIVDNQYAFAAKLLDAQHEYFTAVLTAAAPVLPKTAPAAR* |
Ga0055453_102171071 | 3300004006 | Natural And Restored Wetlands | MSTYLDVSKTYQEQLLSMIEQSQKLTVDGVSAWAKATQPLAKAAPATPAVEGAVSPKELLDNSYSFATKLLHAQHEYLSAVLTAAEPAVPKPTPAAK* |
Ga0063454_1002397081 | 3300004081 | Soil | MATATPSYLELSKTYQDQVLSLIEQSQKLAVESVSAWTKAVQPIAKNAPAAPIAGVPSPKEIVDNQYAFAAKLLDAQHEYFTAVLTAAAPVLPKTAPAAR* |
Ga0062591_1006122992 | 3300004643 | Soil | MAVNTPTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPATGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPAAK* |
Ga0062594_1001567142 | 3300005093 | Soil | MSTYLDLSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPVTPAVPGVVSPKELLDNSYKFATKLLHAQHEYLSAVLDAAEPVVPKATPAAK* |
Ga0066808_10147102 | 3300005159 | Soil | MSTYLDLSKTYQDQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPATPAVEGAVSPKELLDNSYSFATKLLHAQHEYMSAVLAAAEPVVPKATP |
Ga0066814_100366621 | 3300005162 | Soil | MSTYLDLSKTYQEQLLSMMEQSQKLTVDGVSAWAKAAQPLAKAAPATPAVEGAVSPMELLDNSYSFATKLLHAQHEYLSAVLTAAEPVVPKPTPAAKPAAK* |
Ga0066809_100180901 | 3300005168 | Soil | MSTYLDLSKTYQEQLLGMIEQNQKLTVDSVSAWAKAAQPLAKAAPATPAVEGAVSPMELLDNSYSFATKLLHAQHEYLSAVLTAAEPVVPKPTPAAKPAAK* |
Ga0066810_100113222 | 3300005169 | Soil | MSTYLDLSKTYQEQLLGMIEQNQKLTVDSVSAWAKAAQPLAKAAPATPAVEGAVSPKELLDNSYSFATKLLHAQHEYLSAVLTAAEPVVPKPTPAAKPAAK* |
Ga0070711_1012099782 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | VATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAR* |
Ga0070665_1012313792 | 3300005548 | Switchgrass Rhizosphere | FWTPSCLKNRAVGTIVRIVSDPKDSTIVATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPASR* |
Ga0068857_1011502092 | 3300005577 | Corn Rhizosphere | SKNYQEQVLSLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLGAAAPALPKTAPAAK* |
Ga0068856_1005105842 | 3300005614 | Corn Rhizosphere | VATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK* |
Ga0068859_1030109082 | 3300005617 | Switchgrass Rhizosphere | MAVTTPTTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLGAAAPALPKTAPAAK* |
Ga0075035_14716171 | 3300005640 | Permafrost Soil | YQEQVLGMIEQSQKLTVDSVSAWAKAAQPIAKAAPVTPAIPGAPSPKELVDNAYGFATKLLGAQHEYLTAVFAAAEPGVVKTPPAAK* |
Ga0075040_17655532 | 3300005646 | Permafrost Soil | YQEQVLGMIEQSQKLTVDSVSAWAKAAQPIAKTAPVTPAIPGASSPKELVDNAYGFATKLLGAQHEYLTAVLTAAEPVVVKTPPAAK* |
Ga0066903_1006209921 | 3300005764 | Tropical Forest Soil | MATTPTYLELSKTYQDQVLGLIEQSQKLAVESVTAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK* |
Ga0070716_1015678112 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | VSSTVPGTFWTPSCLKNRAVGTIVRTVSDPKDCTTVATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK* |
Ga0070712_1004116942 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAR* |
Ga0074051_117374892 | 3300006572 | Soil | MSTYLDLSKTYQEQVLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPVTPALPGVVSPKELIDNSYGFATKLLHAQHEYMSAVLAAAEPVVPKATPAAKPAAK* |
Ga0074053_116313522 | 3300006575 | Soil | MATTPSYLELSKTYQDQVLGLIEQSQKLAVESVSAWTKAVQPVAKNAPAVPAGVPTPKEIVDNQYAFAAKLLDAQHEYFTAVLTAAAPALPKAAPATK* |
Ga0074053_118965762 | 3300006575 | Soil | MSTYLDLSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPATPAVEGAVSPKELLDNSYSFATKLLHAQHEYLSAVLTAAEPVVPKPTPAAKPAAK* |
Ga0074047_120562492 | 3300006576 | Soil | MSTYLDVSKTYQEQLLGMIEQSQKLTVDSVAAWAKAAQPLAKAAPATPTVEGAVSPKELLDNSYSFATKLLHAQHEYLSAVLTAAEPVVPKPTPAAKPAAK* |
Ga0074062_126465482 | 3300006606 | Soil | MSTYLDLSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPVTPALPGVVSPKELIDNSYGFATKLLHAQHEYMSAVLAAAEPVVPKATPAAK* |
Ga0079222_110553141 | 3300006755 | Agricultural Soil | MAVNTPTYLELSKSYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQ |
Ga0068865_1011729572 | 3300006881 | Miscanthus Rhizosphere | MAVNTPTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPATGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPASR* |
Ga0079219_112729011 | 3300006954 | Agricultural Soil | MAVNTPTYLELSKSYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHAYLTAVLNAAAPALPKSAPAAK* |
Ga0066710_1035297211 | 3300009012 | Grasslands Soil | MSTYLDLSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPITPAVPGVVLPKELLDNSYSFATKLLHAQHEYLSAVLAAAEPVVPKAAPAAK |
Ga0105245_101835863 | 3300009098 | Miscanthus Rhizosphere | VRRARGVRAGALSERFLLEESPTAYYSTQRKAIEGTAFMAVNTPTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPATGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPASR* |
Ga0105245_105005413 | 3300009098 | Miscanthus Rhizosphere | MEERPMSTYLDLSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPVTPAVPGVVSPKELLDNSYKFATKLLHAQHEYLSAVLDAAEPVVPKATPAAK* |
Ga0105245_117345931 | 3300009098 | Miscanthus Rhizosphere | MAIATPSYLELSKNYQEQVLSLIEQSQKLAVESVSAWSKAVQPLAKNAPAAPVAGLPTPKEIVDNQYGFAAKLLEAQHEYLTAVLNAAAPALPKTAPVSK* |
Ga0105243_103597942 | 3300009148 | Miscanthus Rhizosphere | VRGARGVRAGALSERFLLEESPTAYYSTQRKAIEGTAFMAVNTPTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPATGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPASR* |
Ga0105243_115149131 | 3300009148 | Miscanthus Rhizosphere | MAIATPSYLELSKNYQEQVLSLIEQSQKLAVESVSAWSKAVQPLAKNAPAAPVAGLPTPKEIVDNQYGFAAKLLEAQHEYLTAVLNAAAPALPKTAPV |
Ga0115017_10217681 | 3300009411 | Soil | YQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGVPSPKELVDNQYGFATKLLEAQHEYFTAVLTAAAPVLPKTAPAAK* |
Ga0105238_116442452 | 3300009551 | Corn Rhizosphere | LKNRAVGTIVRTVSDPKDCTTVATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPASR |
Ga0105249_118458321 | 3300009553 | Switchgrass Rhizosphere | KEPDMATTPTSYLELSKTYQEQVLGLIEQSQKLAVESVSAWSKAVQPLAKNAPAAPVAGLPTPKEIVDNQYGFAAKLLEAQHEYLTAVLNAAAPALPKTAPVSK* |
Ga0126313_104636452 | 3300009840 | Serpentine Soil | MATTTPTSYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAAPIAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVLTAAAPVLPKTAPAAK* |
Ga0126309_106158122 | 3300010039 | Serpentine Soil | MATPTSYLELSKTYQDQVLGLIEQSQKLAVESVAAWTKAVQPLAKNAPAAPIAGVPSPKELVDNQYGFATKLLEAQHEYFSAVLAAAAPVLPKTAPAAK* |
Ga0134123_105180562 | 3300010403 | Terrestrial Soil | MAVNTPTYLELSKNYQEQVLGLIEQSQKLAVDSVSAWTKAGQPLAKNAPAVPVAGLPTPKEIIDNQYGFAAKLLEAQHEYVSAVLGAAAPALPKTAPAAK* |
Ga0126358_11087511 | 3300010856 | Boreal Forest Soil | MKERTMSTTYLELSKKYQEQVLGMIEQSQKLTVDSVSAWAKAAQPIAKTAPMTPVIPGASSPKELIDNAYGFATKLLGAQHEYLTAVLTAAEPGVVKTPPAAK* |
Ga0126349_12142061 | 3300010861 | Boreal Forest Soil | MKPMKERTVSTTYLELSKKYQEQVLGMIEQSQKLTVDSVSAWAKAAQPIAKTAPMTPVIPGASSPKELIDNAYGFATKLLGAQHEYLTAVLTAAEPGVVKTPPAAK* |
Ga0126348_10091991 | 3300010862 | Boreal Forest Soil | KERTVSTTYLELSKKYQEQVLGMIEQSQKLTVDSVSAWAKAAQPIAKTAPMTPVIPGASSPKELIDNAYGFATKLLGAQHEYLTAVLTAAEPGVVKTPPAAK* |
Ga0126348_12098012 | 3300010862 | Boreal Forest Soil | DEGAHMSTYLELSKTYQEQVLGMIEQSQKVTVDSVSAWAKAAQPIAKATPVTPTIPGVSNPKELIDNAYGFATKLLGAQHQYLTAVLTAAEPVVAKTPPAAK* |
Ga0120159_11771602 | 3300012014 | Permafrost | VTTYLELSKTYQAQVLSMIEQNQKVTVDSVSAWAKATQPLAKTTPSATAIPGVSSPKELIDNAFGFATKLMSAQHQYLTEVFAAAEPAMPKAPATK* |
Ga0150985_1035141671 | 3300012212 | Avena Fatua Rhizosphere | TMATATPSYLELSKTYQDQVLSLIEQSQKLAVESVSAWTKAVQPLAKNAPATPVAGVPSPKEIVDNQYAFAAKLLDAQHEYFTAVLTAAAPVLPKTAPAAK* |
Ga0150985_1092976011 | 3300012212 | Avena Fatua Rhizosphere | RNPTMATATPSYLELSKTYQDQVLSLIEQSQKLAVESVSAWTKAVQPIAKNAPAAPIAGVPSPKEIVDNQYAFAAKLLDAQHEYFTAVLTAAAPVLPKAAPATR* |
Ga0150985_1135557461 | 3300012212 | Avena Fatua Rhizosphere | MATTPTSYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPTAPVAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVLTAAAPVLPKTAPAAK* |
Ga0150985_1225664811 | 3300012212 | Avena Fatua Rhizosphere | KEPDMATPTSYLELSKTYQEQVLGLIEQSQKLAVEGVSAWTKAVQPIAKNAPAAPIAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVLAAAAPVLPKTAPAAK* |
Ga0137371_104805332 | 3300012356 | Vadose Zone Soil | MKERLMSTYLDLSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPVTPAVPGVVSPKELIDNSYGFATKLLHAQHEYLSAVLTAAEPVVPKTPAAK* |
Ga0137375_109508531 | 3300012360 | Vadose Zone Soil | TYLDLSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPITPAVPGVVSPKELLDNSYGFATKLLHAQHGYLSAVLTAAEPVVPKAAPAAK* |
Ga0134022_11306821 | 3300012371 | Grasslands Soil | QDQVLGMIEQGQKLTVDSVSAWAKAAQPLAKAAPATPLVDGIATPKELVDNAYGFATRLIDVQHKYLSAVLAAAEPAAPKAPTSAK* |
Ga0150984_1110158972 | 3300012469 | Avena Fatua Rhizosphere | MATPTSYLELSKTYQEQVLGLIEQSQKLAVEGVSAWTKAVQPIAKNAPAAPIAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVLAAAAPVLPKTAPAAK* |
Ga0150984_1128729791 | 3300012469 | Avena Fatua Rhizosphere | KEPDMATTTPTSYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAAPVAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVLTAAAPVLPKTAPAAK* |
Ga0150984_1162795621 | 3300012469 | Avena Fatua Rhizosphere | MKERTMATATPSYLELSKNYQDQVLSLIEQSQKLAVESVSAWTKAVQPLAKNAPATPVAGVPSPKEIVDNQYAFAAKLLDAQHEYFTAVLTAAAPVLPKTAPAAR* |
Ga0164298_110614882 | 3300012955 | Soil | SKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK* |
Ga0164298_112854511 | 3300012955 | Soil | MSTYLDLSKTYQEQLLGMIEQGQQLTVDSVSAWAKAAQPLAKAAPVTPAAPGVVSPKELLDNSYKFATKLLHAQHEYLSAVLDAAEPVVPKATPAAK* |
Ga0164301_114433812 | 3300012960 | Soil | VGTIVRTVSDPKDCTTVATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK* |
Ga0164301_114651332 | 3300012960 | Soil | CHEGRDPPGPAWGAVLEESRSAYYSTQGKQSKERTMAIATPSYLELSKNYQEQVLSLIEQSQKLAVESVSAWSKAVQPLAKNAPAAPVAGLPTPKEIVDNQYGFAAKLLEAQHEYLTAVLNAAAPALPKTAPVSK* |
Ga0164309_105339502 | 3300012984 | Soil | MEERPMSTYLDLSKTYQEQLLGMIEQSQKLTVDSVPAWAKAAQPLAKAAPMTPAVPGVVSPKELLDNSYSFATKLLHAQHEYLSAVLAAAEPVVPKPKPAAK* |
Ga0164304_104771621 | 3300012986 | Soil | CTTVATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK* |
Ga0164307_114862391 | 3300012987 | Soil | MAIATPSYLELSKNYQEQVLSLIEQSQKLAVESVSAWSKAVQPLAKNAPAAPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLTAAAPVLPKTAPAAK* |
Ga0164306_107507281 | 3300012988 | Soil | MGTIVRIVSDPKDCTTVATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK* |
Ga0164305_113878751 | 3300012989 | Soil | MSTYLDVSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPMTPAVPGVVSPKELLDNSYKFATKLLHAQHEYLSAVLDAAEPVVPKATPAAK* |
Ga0163162_104318603 | 3300013306 | Switchgrass Rhizosphere | VLEESRSAYYSTQGKQSKERTMAIATPSYLELSKNYQEQVLSLIEQSQKLAVESVSAWSKAVQPLAKNAPAAPVAGLPTPKEIVDNQYGFAAKLLEAQHEYLTAVLNAAAPALPKTAPVSK* |
Ga0157375_111922843 | 3300013308 | Miscanthus Rhizosphere | AYYSTQRKAIEGTAFMAVNTPTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK* |
Ga0120181_10872981 | 3300013766 | Permafrost | MTTYLELSKTYQEQVLGMIEQNQKVTVDSVSAWAKATQPLAKTTPGATAIPGVSSPKELIDNAFGFATKLMSVQHQYLTEVFAAAEPAMPKAPATK* |
Ga0120158_103394792 | 3300013772 | Permafrost | VTTYLELSKTYQAQVLSMIEQNQKVTVDSVSAWAKATQPLAKTTPGATAIPGVSSPKELIDNAFGFATKLMSAQHQYLTEVFAAAEPAMPKAPATK* |
Ga0120149_10718642 | 3300014058 | Permafrost | VTTYLELSKTYQAQVLSMIEQNQKVTVDSVSAWAKATQPLAKTAPSATAIPGVSSPKELIDNAFGFATKLMSAQHQYLTEVFAAAEPAMPKAPATK* |
Ga0157380_115609343 | 3300014326 | Switchgrass Rhizosphere | MAVNTPTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPATGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLGAAAPALPKTAPAAK* |
Ga0157380_132904682 | 3300014326 | Switchgrass Rhizosphere | MEERLMSTYLDLSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPVTPAVPGVVSPKELLDNSYKFATKLLHAQHEYLSAVLDAAEPVVPKATPAAK* |
Ga0157377_109089572 | 3300014745 | Miscanthus Rhizosphere | MAVTTPTYLELSKNYQEQVLSLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLGAAAPALPKTAPAAK* |
Ga0157376_114406052 | 3300014969 | Miscanthus Rhizosphere | MAVNTPTYLELSKNYQEQVLSLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLGAAAPALPKTAPAAK* |
Ga0132258_1003023013 | 3300015371 | Arabidopsis Rhizosphere | MEERLMSTYLDLSKTYQEQVLGMIGQSQKLTVESVSAWAKAAQPLAKAAPVTPAIPGIVSPKELIDNSYAFATKLLHAQHEYMSAVLTAAEPVVPKTTPAK* |
Ga0132258_130133752 | 3300015371 | Arabidopsis Rhizosphere | MEERLMSTYLDVSKTYQEQLLGMIEQSQKLTVDSVAAWAKAAQPLAKAAPATPAVEGAVSPKELLDNSYGFATKLLQAQHEYLSAVLTAAEPVVPKPKPAAK* |
Ga0132257_1004943581 | 3300015373 | Arabidopsis Rhizosphere | MEERLMSTYLDLSKTYQEQVLGMIEQSQKLTVESVSAWAKAAQPLAKAAPVTPAIPGIVSPKELIDNSYAFATKLLHAQHEYMSAVLTAAEPVVPKTTPAK* |
Ga0190274_101519653 | 3300018476 | Soil | MATTTPTSYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVLTAAAPVLPKTAPATK |
Ga0184647_10174281 | 3300019263 | Groundwater Sediment | MATTTPTSYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPVAPVAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVLTAAAPVLPKTAPATK |
Ga0206355_15587422 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | LGMIEQSQKLTVDSVSAWAKAAQPLAKAAPVTPAVPGVVSPKELLDNSYKFATKLLHAQHEYLSAVLDAAEPVVPKATPAAK |
Ga0213856_11155352 | 3300021947 | Watersheds | MATTTPTSYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVLTAAAPVLPKTAPAAK |
Ga0208076_10134562 | 3300025464 | Arctic Peat Soil | MSTSTPTYLELSKTYQEQMLGMIEQSQKMAVESVTAWAKAAQPLAKTAPTATAIPGMASPKDLVDNTFGFATKLLGAQHEYLTAVFTAAEPAMPKTPAAAK |
Ga0208848_10540322 | 3300025509 | Arctic Peat Soil | MSTSTPTYLELSKTYQEQMLGMIEQSQKMAVESVTAWAKAAQPLAKTAPTATAIPGMASPKDLVDNTFGFATKLLGAQHEYLTAVFAAAEPAMPKTPAAAK |
Ga0210120_10913452 | 3300025556 | Natural And Restored Wetlands | MSTYLDVSKTYQEQLLSMIEQSQKLTVDGVSAWAKATQPLAKAAPATPAVEGAVSPKELLDNSYSFATKLLHAQHEYLSAVLTAAEPAVPKPTPAGK |
Ga0208219_10455251 | 3300025625 | Arctic Peat Soil | MSTSTPTYLELSKTYQEQMLGMIEQSQKVAVDSVSAWAKATQPLAKNAPVATAIPGMTSPKDLVDNAFGFATKLMDAQHQYLTAVFAAAEPAMPKTPAAAK |
Ga0207685_102569592 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | VATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK |
Ga0207687_108659092 | 3300025927 | Miscanthus Rhizosphere | MAIATPSYLELSKNYQEQVLSLIEQSQKLAVESVSAWSKAVQPLAKNAPAAPVAGLPTPKEIVDNQYGFAAKLLEAQHEYLTAVLNAAAPALPKTAPVSK |
Ga0207687_117195731 | 3300025927 | Miscanthus Rhizosphere | LEESPTAYYSTQRKAIEGTAFMAVNTPTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPATGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPAS |
Ga0207686_107932192 | 3300025934 | Miscanthus Rhizosphere | MAVNTPTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPATGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPASR |
Ga0207665_110991872 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | VSSTVPGTFWTPSCLKNRAVGTIVRTVSDPKDCTTVATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYFTAVLNAAAPALPKTAPAAK |
Ga0207661_120763532 | 3300025944 | Corn Rhizosphere | MAVTTPTYLELSKNYQEQVLSLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLGAAAPALPKTAPAAK |
Ga0207667_115647042 | 3300025949 | Corn Rhizosphere | YQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPATGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPASR |
Ga0207712_108665461 | 3300025961 | Switchgrass Rhizosphere | RAGALSERFLLEESPTAYYSTQRKAIEGTAFMAVNTPTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPATGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPASR |
Ga0207639_119805841 | 3300026041 | Corn Rhizosphere | ERPMSTYLDLSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPVTPAVPGVVSPKELLDNSYKFATKLLHAQHEYLSAVLDAAEPVVPKATPAAK |
Ga0207708_112163261 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTYLDLSKTYQEQLLGMIEQSQKLTVDSVSAWAKAAQPLAKAAPVTPAVPGVVSPKELLDNSYKFATKLLHAQHEYLSAVLDAA |
Ga0208890_10091752 | 3300027523 | Soil | MSTYLDVSKTYQEQLLGMIEQNQKLTVDSVSAWAKAAQPLAKAAPATPAVEGAVSPKELLDNSYSFATKLLHAQHEYLSAVLTAAEPVVPKPKPAAK |
Ga0207981_10105832 | 3300027560 | Soil | MSTYLDLSKTYQEQLLGMIEQNQKLTVDSVSAWAKAAQPLAKAAPATPAVEGAVSPKELLDNSYSFATKLLHAQHEYLSAVLTAAEPVVPKPTPAAKPAAK |
Ga0268266_121282002 | 3300028379 | Switchgrass Rhizosphere | VGTIVRIVSDPKDCTTVATTPTYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGLPTPKEIVDNQYGFAAKLLEAQHEYVTAVLAAAAPALPKTAPASR |
Ga0307285_100928001 | 3300028712 | Soil | MATTTPTSYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPAVPVAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVL |
Ga0307297_103142092 | 3300028754 | Soil | MATTTPTSYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKNAPTAPVAGVPSPKEIVDNQYGFATKLLEAQHEYFTAVLTAAAPVLPKTAPATK |
Ga0247825_113562371 | 3300028812 | Soil | STQRKAIEGTAFMAVNTPTYLELSKNYQEQVLGLIEQSQKLAVESVSAWTKAVQPLAKTAPAVPVAGLPTPKEIIDNQYGFAAKLLEAQHEYVTAVLGAAAPALPKTAPAAK |
Ga0102757_113696251 | 3300030785 | Soil | PASYLELSKTYQDQVLGLIEQSQKLAVESVAAWTKAVQPLAKNAPAAPIAGVPSPKELVDNQYGFATKLLEAQHEYFSAVLAAAAPVLPKTAPAAK |
Ga0073997_119247151 | 3300030997 | Soil | MATPTSYLELSKTYQDQVLGLIEQSQKLAVESVSAWTKAVQPIAKNAPAAPIAGVPSPKELVDNQYGFATKLLEAQHEYFSAVLAAAAPVLPKTAPATK |
Ga0073996_123517162 | 3300030998 | Soil | PVMATPTSYLELSKTYQDQVLGVIEQSQKLAVESVSAWTKAVQPVAKNAPIAPIAGVPSPKELVDNQYGFATKLLEAQHEFFSAVLAAAAPVLPKAAPTTK |
Ga0307506_100009266 | 3300031366 | Soil | MATPTSYLELSKTYQEQVLGIIEQSQKLAVEGVSAWTKAVQPIAKNAPAAPIAGVPSPKEIVDNQYGFATKLLEAQHEYFSAVLAAAAPVLPKAAPAAK |
Ga0326731_10686411 | 3300033502 | Peat Soil | MSTYLDLSKTYQEQLLGMIEQSQKLTVDGVSAWAKAAQPLAKAAPVAPAVEGVVSPKELLDNSYSFATKLLHAQHEYLSAVLTAAEPVVPKATPAAKPAAK |
Ga0370545_097958_3_290 | 3300034643 | Soil | TSYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPIAKNAPAAPIAGVPSPKEIVDNQYGFATKLLEAQHEYFSAVLAAAAPVLPKTAPATK |
Ga0370546_076662_8_307 | 3300034681 | Soil | MATPTSYLELSKTYQEQVLGLIEQSQKLAVESVSAWTKAVQPIAKNAPAAPIAGVPSPKEIVDNQYGFATKLLEAQHEYFSAVLAAAAPVLPKTAPATK |
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