Metagenome / Metatranscriptome Family F090731

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090731
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	50 residues
Representative Sequence	VSMAPSTNGFLLLDAGLNLIAANDPALQILCFPSGADRIKQPKVFLADRVRTTLLD
Number of Associated Samples	89
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	94.44 %
% of genes from short scaffolds (< 2000 bps)	85.19 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.074 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (67.593 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (53.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.14% β-sheet: 8.33% Coil/Unstructured: 84.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF03400	DDE_Tnp_IS1	3.70
PF13185	GAF_2	1.85
PF00072	Response_reg	0.93
PF13340	DUF4096	0.93
PF01103	Omp85	0.93
PF00075	RNase_H	0.93
PF13462	Thioredoxin_4	0.93
PF14534	DUF4440	0.93
PF12840	HTH_20	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	3.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.07 %
All Organisms	root	All Organisms	25.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.07 %
cellular organisms	root	All Organisms → cellular organisms	25.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.07 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.48 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	3.70 %
Geothrix	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3.70 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.93 %
unclassified Geothrix	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3.70 %
Geothrix sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp.	0.93 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10815317	Not Available	534	Open in IMG/M
3300004598\|Ga0068975_1120910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	505	Open in IMG/M
3300004602\|Ga0068960_1126633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	523	Open in IMG/M
3300006052\|Ga0075029_100205854	Not Available	1230	Open in IMG/M
3300006052\|Ga0075029_100924648	Not Available	599	Open in IMG/M
3300006059\|Ga0075017_100373099	Not Available	1066	Open in IMG/M
3300006102\|Ga0075015_100333087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	842	Open in IMG/M
3300006174\|Ga0075014_100967270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	514	Open in IMG/M
3300009518\|Ga0116128_1006197	All Organisms → cellular organisms → Bacteria	4465	Open in IMG/M
3300009518\|Ga0116128_1013701	Not Available	2845	Open in IMG/M
3300009519\|Ga0116108_1198758	Not Available	589	Open in IMG/M
3300009521\|Ga0116222_1217042	Not Available	824	Open in IMG/M
3300009523\|Ga0116221_1032845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp.	2551	Open in IMG/M
3300009552\|Ga0116138_1052705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300009617\|Ga0116123_1166170	Not Available	566	Open in IMG/M
3300009629\|Ga0116119_1047241	Not Available	1121	Open in IMG/M
3300009632\|Ga0116102_1005690	All Organisms → cellular organisms → Bacteria	4743	Open in IMG/M
3300009636\|Ga0116112_1170837	Not Available	604	Open in IMG/M
3300009638\|Ga0116113_1074590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	801	Open in IMG/M
3300009639\|Ga0116122_1047425	Not Available	1459	Open in IMG/M
3300009643\|Ga0116110_1071020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1216	Open in IMG/M
3300009672\|Ga0116215_1065958	Not Available	1634	Open in IMG/M
3300009839\|Ga0116223_10383727	Not Available	828	Open in IMG/M
3300009839\|Ga0116223_10875098	Not Available	513	Open in IMG/M
3300010379\|Ga0136449_102967152	Not Available	664	Open in IMG/M
3300012927\|Ga0137416_11117330	Not Available	707	Open in IMG/M
3300014155\|Ga0181524_10052946	Not Available	2554	Open in IMG/M
3300014156\|Ga0181518_10229902	Not Available	951	Open in IMG/M
3300014162\|Ga0181538_10168225	Not Available	1247	Open in IMG/M
3300014164\|Ga0181532_10273585	Not Available	963	Open in IMG/M
3300014167\|Ga0181528_10481015	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300014495\|Ga0182015_10869033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300014638\|Ga0181536_10056703	All Organisms → cellular organisms → Bacteria	2516	Open in IMG/M
3300017925\|Ga0187856_1012036	All Organisms → cellular organisms → Bacteria	4882	Open in IMG/M
3300017925\|Ga0187856_1091224	Not Available	1229	Open in IMG/M
3300017925\|Ga0187856_1164568	Not Available	826	Open in IMG/M
3300017931\|Ga0187877_1025659	All Organisms → cellular organisms → Bacteria	3056	Open in IMG/M
3300017935\|Ga0187848_10426096	Not Available	545	Open in IMG/M
3300017940\|Ga0187853_10004754	Not Available	9759	Open in IMG/M
3300017940\|Ga0187853_10199409	Not Available	937	Open in IMG/M
3300017940\|Ga0187853_10398477	Not Available	609	Open in IMG/M
3300017943\|Ga0187819_10139155	Not Available	1447	Open in IMG/M
3300017955\|Ga0187817_11131313	Not Available	503	Open in IMG/M
3300017995\|Ga0187816_10278138	Not Available	732	Open in IMG/M
3300017995\|Ga0187816_10492587	Not Available	551	Open in IMG/M
3300018001\|Ga0187815_10378626	Not Available	602	Open in IMG/M
3300018002\|Ga0187868_1088573	Not Available	1220	Open in IMG/M
3300018005\|Ga0187878_1079332	All Organisms → cellular organisms → Bacteria → Acidobacteria	1386	Open in IMG/M
3300018006\|Ga0187804_10104393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300018008\|Ga0187888_1023539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3181	Open in IMG/M
3300018012\|Ga0187810_10092313	Not Available	1182	Open in IMG/M
3300018014\|Ga0187860_1341035	Not Available	572	Open in IMG/M
3300018018\|Ga0187886_1110342	Not Available	1135	Open in IMG/M
3300018019\|Ga0187874_10102409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1246	Open in IMG/M
3300018019\|Ga0187874_10161355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300018020\|Ga0187861_10089052	Not Available	1509	Open in IMG/M
3300018020\|Ga0187861_10104575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1360	Open in IMG/M
3300018025\|Ga0187885_10064930	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300018025\|Ga0187885_10211374	Not Available	896	Open in IMG/M
3300018037\|Ga0187883_10545297	Not Available	599	Open in IMG/M
3300018038\|Ga0187855_10825914	Not Available	541	Open in IMG/M
3300018040\|Ga0187862_10023920	All Organisms → cellular organisms → Bacteria	4726	Open in IMG/M
3300018040\|Ga0187862_10468126	Not Available	763	Open in IMG/M
3300018042\|Ga0187871_10860448	Not Available	506	Open in IMG/M
3300018043\|Ga0187887_10698521	Not Available	599	Open in IMG/M
3300018047\|Ga0187859_10265514	Not Available	924	Open in IMG/M
3300018062\|Ga0187784_10742158	Not Available	785	Open in IMG/M
3300018088\|Ga0187771_11734362	Not Available	530	Open in IMG/M
3300018090\|Ga0187770_11112481	Not Available	637	Open in IMG/M
3300019082\|Ga0187852_1339960	Not Available	592	Open in IMG/M
3300021168\|Ga0210406_10297811	Not Available	1312	Open in IMG/M
3300021405\|Ga0210387_11246460	Not Available	644	Open in IMG/M
3300021432\|Ga0210384_10656306	Not Available	940	Open in IMG/M
3300023259\|Ga0224551_1025343	Not Available	1015	Open in IMG/M
3300025320\|Ga0209171_10362929	Not Available	753	Open in IMG/M
3300025448\|Ga0208037_1021309	Not Available	1517	Open in IMG/M
3300025453\|Ga0208455_1052550	Not Available	863	Open in IMG/M
3300025477\|Ga0208192_1037418	Not Available	1023	Open in IMG/M
3300025498\|Ga0208819_1119658	Not Available	544	Open in IMG/M
3300025498\|Ga0208819_1129047	Not Available	517	Open in IMG/M
3300025507\|Ga0208188_1035709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1332	Open in IMG/M
3300025507\|Ga0208188_1093100	Not Available	688	Open in IMG/M
3300026514\|Ga0257168_1084919	Not Available	702	Open in IMG/M
3300027625\|Ga0208044_1011232	Not Available	3422	Open in IMG/M
3300027674\|Ga0209118_1056519	Not Available	1151	Open in IMG/M
3300027696\|Ga0208696_1124830	Not Available	844	Open in IMG/M
3300027737\|Ga0209038_10027248	Not Available	1691	Open in IMG/M
3300027745\|Ga0209908_10069618	Not Available	818	Open in IMG/M
3300027767\|Ga0209655_10187528	Not Available	681	Open in IMG/M
3300027826\|Ga0209060_10103289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1333	Open in IMG/M
3300027889\|Ga0209380_10285987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	969	Open in IMG/M
3300027905\|Ga0209415_10604298	Not Available	812	Open in IMG/M
3300027905\|Ga0209415_10880701	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300027905\|Ga0209415_10905987	Not Available	599	Open in IMG/M
3300028047\|Ga0209526_10972835	Not Available	510	Open in IMG/M
3300028806\|Ga0302221_10301429	Not Available	698	Open in IMG/M
3300028808\|Ga0302228_10469753	Not Available	555	Open in IMG/M
3300029817\|Ga0247275_1043860	Not Available	1285	Open in IMG/M
3300029817\|Ga0247275_1064325	Not Available	1014	Open in IMG/M
3300029817\|Ga0247275_1093246	Not Available	802	Open in IMG/M
3300030041\|Ga0302274_10027308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3725	Open in IMG/M
3300030509\|Ga0302183_10397434	Not Available	528	Open in IMG/M
3300031028\|Ga0302180_10251929	Not Available	927	Open in IMG/M
3300031234\|Ga0302325_10411059	Not Available	2102	Open in IMG/M
3300031234\|Ga0302325_10430229	Not Available	2037	Open in IMG/M
3300031344\|Ga0265316_10523604	Not Available	845	Open in IMG/M
3300034125\|Ga0370484_0189421	Not Available	561	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	62.04%
Terrestrial	Environmental → Terrestrial	37.04%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	56.48%
Soil	Environmental → Terrestrial → Soil	29.63%
Peat	Environmental → Terrestrial → Peat	7.41%
Sediment	Environmental → Aquatic → Sediment	4.63%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	56.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.63%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	32.41%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	17.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.41%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	25.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	17.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004598	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 72 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004602	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_108153172	3300001593	Forest Soil	MATSNSGFLLLDARLDLXAANDSALQILCFPSAADRIKQPKVFLAD
Ga0068975_11209101	3300004598	Peatlands Soil	MAPSENGFLLLDGGLNLIASNEPALQILCFPSRPDRIKQPRVFLADRIRTALLDHQRT
Ga0068960_11266331	3300004602	Peatlands Soil	MAPSENGFLLLDGGLNLIASNEPALQILCFPSRPDRIKQPRVFLADRIRTALLDHQRTGGLAFV
Ga0075029_1002058543	3300006052	Watersheds	MVPSNNGFLLLDAGLNLIASNDPALQILCFPSGAERIKQPKIFL
Ga0075029_1009246482	3300006052	Watersheds	VSMAPSNNGFLLLDGELNLIASNDPALQILCFPSEANRIKQPKVFLADRVRTTLLD
Ga0075017_1003730991	3300006059	Watersheds	VSMAPSSNGFLLLDGELNLIASNDPALQILCFPSEATRIKQPRVFLADRVRTTLLDH
Ga0075015_1003330872	3300006102	Watersheds	MSMAPGVCGFLLLDPGWNLIAANAPARQILCFPGEADRIRQPEVF
Ga0075014_1009672701	3300006174	Watersheds	MVPSDSGFLLLDADLNLLASNDPALQILCFPSEASRIKQPKVLLADRVRTALLDHQH
Ga0116128_10061972	3300009518	Peatland	MSMAPSNDGFLLLDAGLNLIAANDPALQILCFPSGAGRIKQPKVFLADRVRTTLLLSIA*
Ga0116128_10137011	3300009518	Peatland	MMAPSTNGFLLLDAGLNLIASNDPALQILCFPSGANRIKQPKVFLADRVRTTLL
Ga0116108_11987581	3300009519	Peatland	MMAPSTNGFLLLDAGLNLIASNDPALQILCFPSGANRIKQPKVFLADRVRTTLLGNV*
Ga0116222_12170421	3300009521	Peatlands Soil	MAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKV
Ga0116221_10328451	3300009523	Peatlands Soil	MSMAPSTNGFLLLDGGWNLIAANDPALQILCFPSEAGRIKQSKVFLADRVRTTLLDHNRESGTAFV
Ga0116138_10527053	3300009552	Peatland	MSMAPSKSGFLLLDAGWNLIASNDPALQILCFPSGAGRIKQPKVFLADRVRTTLLLSIA*
Ga0116123_11661701	3300009617	Peatland	MAPSTNGFLLLDGGLNLIAANNPALQILCFPNGEKIKQPK
Ga0116119_10472412	3300009629	Peatland	MAPSDNGFLLLDAGLNLIASNDPALQILCFPSGADRIKQPK
Ga0116102_100569011	3300009632	Peatland	MSMAPSNDGFLLLDAGLNLIASNDPALQVLCFPSGADRIKQPKVFLADRVRTTLLD
Ga0116117_11841081	3300009635	Peatland	LLNDNKLVQTGENIVTMAPSNNGFLLLDAGFNLIASNGPALQILCFPSGADRIKQPKVFLADRVRTALIDHRN
Ga0116112_11708371	3300009636	Peatland	MAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKVFLA
Ga0116113_10745901	3300009638	Peatland	MAASDNGSLLLDAGLNLIASNAPALQILCFPSGPDRIKQPKVFLADRVRTSL
Ga0116122_10474253	3300009639	Peatland	MAPSINGFLLLDGGWNLIAANDLALQILCFPSRADRIKQTKVFLADRVRTTLLDN
Ga0116110_10710201	3300009643	Peatland	MSMAPSKSGFLLLDAGWNLIASNDPALQILCFPSGADRIKQPKVFLADRVRTTLLDHNRQ
Ga0116215_10659581	3300009672	Peatlands Soil	MAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKVF
Ga0116223_103837272	3300009839	Peatlands Soil	MAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKVFLADRVR
Ga0116223_108750981	3300009839	Peatlands Soil	MAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKVFLADRVRTTLLD
Ga0136449_1029671521	3300010379	Peatlands Soil	MAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKVFLADRV
Ga0137416_111173301	3300012927	Vadose Zone Soil	MAPSNSGFLLLDDRLNLIAANDCALQILCFPSVADRIKQPRVFLADRVRTT
Ga0181524_100529462	3300014155	Bog	MAPSNNGFLLLDGELNLIASNDPALQILCFPSEANRIKQPKVFL
Ga0181518_102299021	3300014156	Bog	MAPSTNGFLLLDGGLNLIAANDPALQILSFPGGEKIKQP
Ga0181538_101682251	3300014162	Bog	MSMAPSNSGFLLLDAGWNLIASNDPALQILCFPSGADRIKQPKVFLADRVRTTLLDH
Ga0181532_102735851	3300014164	Bog	MAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKVFLADRVRTT
Ga0181528_104810151	3300014167	Bog	MSLALSTNGFLLLDTALNVLAANQQALEILSFPTAADQIKQPKVFLADRVRITLVD
Ga0182015_108690332	3300014495	Palsa	MAPSNNGFLLLDAGLNLIASNDPALQILCFPSAADRI
Ga0181536_100567031	3300014638	Bog	MVPSHSGFLLLDNELNLLASNDPALQIFCFPNDVSRIKQPKVLLAD
Ga0187856_10120362	3300017925	Peatland	MSMAPSNDGFLLLDAGLNLIAANDPALQILCFPSGAGRIKQPKVFLADRVRTTLLLSIA
Ga0187856_10912241	3300017925	Peatland	MAPSTNGFLLLDAGLNLIAANDPALQILCFPSRADRIKQPKVFLADRVRTA
Ga0187856_11645682	3300017925	Peatland	VTMAPSTNGFLLLDAGLNLIAANDPALQILCFPSRADRIKQPKVFLADRVRTA
Ga0187877_10256591	3300017931	Peatland	MSMAPSKSGFLLLDAGWNLIASNDPALQILCFPSGADRIKQPKVFLADRVRTTLLDHNRQGGT
Ga0187848_104260961	3300017935	Peatland	VAITPSYKGFLLLDGGCNLVAANDAALQILCFPRAPDQIK
Ga0187853_100047541	3300017940	Peatland	MMAPSTNGFLLLDAGLNLIASNDPALQILCFPSGANRIKQPKVFLADRVRTTLLGNV
Ga0187853_101994092	3300017940	Peatland	VSMAPSNNGFLLLDGELNLIASNDPALQILCFPSEANRIKQPKVFLADRVRTTLLDQQNEQKAF
Ga0187853_103984771	3300017940	Peatland	VSMAPSTNGFLLLDSGWNLIAANDPALQILCFPSGADRIKQPKVLLADRVRTTLL
Ga0187819_101391552	3300017943	Freshwater Sediment	VSMAPSTNGFLLLDAGLNLIAANDPALQILCFPSGADRIKQPKVFLADRVRTTLLD
Ga0187817_111313131	3300017955	Freshwater Sediment	MSMAPSNDGFLLLDAGLNLIASNDLALQVLCFPSGASRIKQPKV
Ga0187816_102781381	3300017995	Freshwater Sediment	MAPSTNGFLLLDAGLNLIAANDPALQILCFPSGADRIKQPKVFLADRVRTTLLDHGNQD
Ga0187816_104925872	3300017995	Freshwater Sediment	VSMAPSNNGFLLLDGELNLIASNDPALQILCFPSEANRIKQPRVFLADRVRTTLLDHQQN
Ga0187815_103786261	3300018001	Freshwater Sediment	VSMAPSTNGFLLLDAGLNLIAANDPALQILCFPSGADRI
Ga0187868_10885731	3300018002	Peatland	MAPSTNGFLLLDAGLNLIAANDPALQILCFPSRADRIKQPKVFLADRV
Ga0187878_10793323	3300018005	Peatland	MMAPSTNGFLLLDAGLNLIASNDPALQILCFPSGANRIKQPKVFLA
Ga0187804_101043932	3300018006	Freshwater Sediment	MSMAPSNDGFLLLDAGLNLIASNDLALQVLCFPSG
Ga0187888_10235391	3300018008	Peatland	MSMAPSKSGFLLLDAGWNLIASNDPALQILCFPSGADRIKQPKVFLADRVRTTLLDHNRQRGTAF
Ga0187810_100923132	3300018012	Freshwater Sediment	MMAPSKSGFLLLDAGLNLIASNDPALQVLCFPSEAGRIKQPRVFLADRVRTTLL
Ga0187860_13410351	3300018014	Peatland	VSMAPSINGFLLLDGGWNLIAANDPALQILCFPSGADRIKQP
Ga0187886_11103421	3300018018	Peatland	MAPSTNGFLLLDAGLNLIAANDPALQILCFPSRAD
Ga0187874_101024094	3300018019	Peatland	MSMAPSNDGFLLLDAGLNLIAANDPALQILCFPSGAGRIK
Ga0187874_101613551	3300018019	Peatland	MSMAPSKSGFLLLDAGWNLIASNDPALQILCFPSGADRIKQPKVFLADRVRTTLLDH
Ga0187861_100890521	3300018020	Peatland	VSMASSTNGFLLLDSGWNLIAANDPALQILCFPSGADRIKQPKVFLADRVRTTLLDHNRQGGTA
Ga0187861_101045751	3300018020	Peatland	MSMAPSKSGFLLLDAGWNLIASNDPALQILCFPSGADRIKQPKVFLADRVRTTLLDHNRQGGTA
Ga0187885_100649301	3300018025	Peatland	MAPSNSGFLLLDAGLNLIASNDRALQILCFPSGAD
Ga0187885_102113741	3300018025	Peatland	VSMAPSNNGFLLLDGELNLIASNDPALQILCFPSEANRIKQPKVFL
Ga0187883_105452971	3300018037	Peatland	MSASNNGFLLFDAGLNLIASNEQALQILSFSSEADRIKQPKVSRADRVRISLLDHRRQGGTAFVKDFT
Ga0187855_108259141	3300018038	Peatland	MVPSNSGFLLLDARLNLIASNDPALQILCFPSEVNRIKQPRVFLADRVRTTILD
Ga0187862_100239201	3300018040	Peatland	MSMAPSNDGFLLLDAGLNLIAANDPALQILCFPSGAGRIKQP
Ga0187862_104681261	3300018040	Peatland	MSMAPSKSGFLLLDAGWNLIASNDPALQILCFPSGADRIKQPKVFLADRVRTTLLDHNRQGGTAFVKEFK
Ga0187871_108604481	3300018042	Peatland	VSMAPSTNGFLLLDGGLNLIAANDPALQILSFPGGEKIKQPKVFLADRVRTTLLDHGTQN
Ga0187887_106985211	3300018043	Peatland	MAPSNNGFLLLDAGFNLIASNGPALQILCFPSGADRIKQPKVFL
Ga0187859_102655141	3300018047	Peatland	VSMVPSANGFLLLDSSLNLIAANQPALQILCYPSQADRIKQPK
Ga0187784_107421581	3300018062	Tropical Peatland	MSIAPNNEGFLLLDAGLNLIASNDLALQVLCFPSGASRIKQPKVFLA
Ga0187771_117343621	3300018088	Tropical Peatland	VSMAPSNSGFLLLDADLNLLASNEPAVQILCFPSD
Ga0187770_111124811	3300018090	Tropical Peatland	VSIVPSNSGFLLLDADLNLLASNDSALQILCFPSEVSRIKQPKVLLADRVRTTLVDHQHR
Ga0187852_13399601	3300019082	Peatland	VSMAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKAFLADRVRTTLLDHGNQ
Ga0210406_102978111	3300021168	Soil	MAPGANGFLLLDTGFNLIAANEPALQILCFPSHADRIKQPKVFIADRVRTALV
Ga0210387_112464601	3300021405	Soil	MAPGANGFLLLDTGFNLIAANEPALQILCFPSHADR
Ga0210384_106563061	3300021432	Soil	VPMAPSNSGFLLLDDKLNLIAANDPALQILCFPSGADRIKQPKVF
Ga0224551_10253432	3300023259	Soil	MSMAPSNNGFLLLDAGLNLIASNDPALQILCFPSAADRIKQPKVFLGDCVRTTLLDHKHQGGLAF
Ga0209171_103629291	3300025320	Iron-Sulfur Acid Spring	VPMAASNSGFLLLDARLNLIAANDSALQILCFPSAADRIKQPKVFLADRVRTTLLDHRTR
Ga0208037_10213094	3300025448	Peatland	MMAPSTNGFLLLDAGLNLIASNDPALQILCFPSGANRI
Ga0208455_10525502	3300025453	Peatland	VSMAPSNNGFLLLDGELNLIASNDPALQILCFPSEAN
Ga0208192_10374181	3300025477	Peatland	VSMAPSTNGFLLLDGGLNLIAANNPALQILCFPNGEKI
Ga0208819_11196581	3300025498	Peatland	VSMAPSTNGFLLLDGGLNLIAANNPALQILCFPNGEKIKQPKVLLADR
Ga0208819_11290471	3300025498	Peatland	MMAPSTNGFLLLDAGLNLIASNDPALQILCFPSGANRIKQPKVFLADRVRTTLLDHN
Ga0208188_10357094	3300025507	Peatland	MSMAPSNDGFLLLDAGWNLIAANDPALQILCFPSGADRIKQPEVFLA
Ga0208188_10931001	3300025507	Peatland	MMAPSTNGFLLLDAGLNLIASNDPALQILCFPSGANRIKQPKVFLADRVRTTLLD
Ga0257168_10849192	3300026514	Soil	VSMATSDSGFLLLDARLDLIAANDSALQILCFPSAADRIKHPKV
Ga0208044_10112321	3300027625	Peatlands Soil	VSMAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKVFLADRVRTTLLDHGN
Ga0209118_10565192	3300027674	Forest Soil	VPMAASNSGFLLLDARLNLIAANDSALQILCFPSAADRIKQ
Ga0208696_11248301	3300027696	Peatlands Soil	VSMAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKVFLADRVRT
Ga0209038_100272483	3300027737	Bog Forest Soil	VTMAPSTNGFLLLDGELNLIASNDPALQILCFPSEVNRIKQPR
Ga0209908_100696181	3300027745	Thawing Permafrost	MAPSNNGFLLLDSGLNLIASNDPALQILCFPSGAD
Ga0209655_101875281	3300027767	Bog Forest Soil	MAPSNNGFLLLDAGLNLIASNAPALQILCFPSGADR
Ga0209060_101032891	3300027826	Surface Soil	MSVVASNNGFLLLDAGLNPIASNDPALQILGFPSE
Ga0209380_102859871	3300027889	Soil	MAASNSGFLLLDARLDLIAANDSALQILCFPSAADRIKQPKVFLADRVRTTLLDHRNRDRSAFVK
Ga0209415_106042981	3300027905	Peatlands Soil	VSMAPSTNGFLLLDGGFNLIAANDPALQILSFPSGADRIKQPKVFLADRVRTTLLD
Ga0209415_108807011	3300027905	Peatlands Soil	MMAPSESGFLLLDGGWNLIAANDPALQILCFPSGADRIKQPKVFLADRVR
Ga0209415_109059871	3300027905	Peatlands Soil	VSMVPSNNGFLLLDAGLNLIAANNPALQILCFPSEADRIKHPKVFLGDRVRTTLLDHKHQGGLAFVK
Ga0209526_109728351	3300028047	Forest Soil	VPMAASNSGFLLLDARLNLIAANDSALQILCFPSA
Ga0302221_103014291	3300028806	Palsa	MAPSNNGFLLLDAGLNLIASNDPALQILCFPSEADRIKQPKVFLSDR
Ga0302228_104697531	3300028808	Palsa	MAPSNNGFLLLDAGLNLIASNDPALQILCFPSEADRIKQPKVFL
Ga0247275_10438601	3300029817	Soil	MSMAPSNSGFLLLDAGLNLIASNDRALQILCFPSGADRIKQPKVFLADRVRITLLDHE
Ga0247275_10643252	3300029817	Soil	VSMAPSINGFLLLDGGWNLIAANDPALQILCFPSGADRIKQPKVLLADRVRTTLLGHNRQGGPA
Ga0247275_10932461	3300029817	Soil	MMAPSTNGFLLLDAGLNLIASNDPALQILCFPSGANRIKQPKVFLADRVRTTLLDHNRQG
Ga0302274_100273081	3300030041	Bog	MAASDNGFLLLDAGLNLIASNAPALQILCFPSGPDRIKQPKVFLADRVRTSLLDHRNQDSPNFVSE
Ga0302183_103974341	3300030509	Palsa	MAPSNNGFLLLDAGLNLIASNGPALQILCFPSGADRIKQ
Ga0302180_102519292	3300031028	Palsa	VSMAPSNNGFLLLDGELNLIASNDPALQILSFPSEANRIKQPRVFLAD
Ga0302325_104110591	3300031234	Palsa	MVPSNNGFLLLDAGLNLIASNGPALQILCFPSGADRIKQPKVFLADR
Ga0302325_104302291	3300031234	Palsa	VSMAPSNNGFLLLDSGLNLIASNDPALQILCFPSGADRIKQPK
Ga0265316_105236041	3300031344	Rhizosphere	VPMVPSHSGFLLFDAEFNLIASNDPALQILCFPSKASRIKQPKVLLADRVRTALLDFRHR
Ga0370484_0189421_403_561	3300034125	Untreated Peat Soil	MVPSNNGFLLVDAGLNLIASNAPALQILGFSSEANRIKQPKLSLADRVRTTLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090731

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences