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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F090680 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 108 |
| Average Sequence Length | 68 residues |
| Representative Sequence | MLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP |
| Number of Associated Samples | 88 |
| Number of Associated Scaffolds | 108 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 65.42 % |
| % of genes near scaffold ends (potentially truncated) | 50.93 % |
| % of genes from short scaffolds (< 2000 bps) | 92.59 % |
| Associated GOLD sequencing projects | 85 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.53 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (78.704 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.556 % of family members) |
| Environment Ontology (ENVO) | Unclassified (37.963 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (57.407 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 28.09% β-sheet: 20.22% Coil/Unstructured: 51.69% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.53 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 108 Family Scaffolds |
|---|---|---|
| PF01068 | DNA_ligase_A_M | 8.33 |
| PF03401 | TctC | 1.85 |
| PF13505 | OMP_b-brl | 1.85 |
| PF05532 | CsbD | 1.85 |
| PF00027 | cNMP_binding | 0.93 |
| PF07690 | MFS_1 | 0.93 |
| PF03480 | DctP | 0.93 |
| PF13670 | PepSY_2 | 0.93 |
| COG ID | Name | Functional Category | % Frequency in 108 Family Scaffolds |
|---|---|---|---|
| COG1423 | ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family | Replication, recombination and repair [L] | 8.33 |
| COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 8.33 |
| COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 1.85 |
| COG3237 | Uncharacterized conserved protein YjbJ, UPF0337 family | Function unknown [S] | 1.85 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 78.70 % |
| All Organisms | root | All Organisms | 21.30 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 30.56% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 6.48% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.63% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 4.63% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 4.63% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.70% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.70% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 3.70% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 2.78% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.78% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 2.78% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.78% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.78% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 2.78% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.85% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.85% |
| Soil | Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil | 1.85% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.85% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.85% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.85% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.93% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 0.93% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 0.93% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.93% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.93% |
| Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 0.93% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.93% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.93% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.93% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001991 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 | Host-Associated | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
| 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
| 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
| 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
| 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300006038 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Host-Associated | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006575 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006579 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006581 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300006953 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
| 3300010147 | Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300010999 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015 | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012908 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1 | Environmental | Open in IMG/M |
| 3300012939 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015 | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300017965 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T | Environmental | Open in IMG/M |
| 3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300019875 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2 | Environmental | Open in IMG/M |
| 3300021078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027401 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes) | Environmental | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028708 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152 | Environmental | Open in IMG/M |
| 3300028716 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198 | Environmental | Open in IMG/M |
| 3300028744 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367 | Environmental | Open in IMG/M |
| 3300028754 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157 | Environmental | Open in IMG/M |
| 3300028768 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119 | Environmental | Open in IMG/M |
| 3300028784 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121 | Environmental | Open in IMG/M |
| 3300028787 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381 | Environmental | Open in IMG/M |
| 3300028796 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141 | Environmental | Open in IMG/M |
| 3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
| 3300028810 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151 | Environmental | Open in IMG/M |
| 3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
| 3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
| 3300028876 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140 | Environmental | Open in IMG/M |
| 3300028884 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195 | Environmental | Open in IMG/M |
| 3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
| 3300031184 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S | Environmental | Open in IMG/M |
| 3300031198 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI24743J22301_101256592 | 3300001991 | Corn, Switchgrass And Miscanthus Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKTFPTRAAAAAERRKLQVKLDLAKEQILRRRPKAATRPQKYRTS |
| Ga0062595_1014987371 | 3300004479 | Soil | MLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERGEVAGEARVAKEQVLKRTP* |
| Ga0062594_1004621913 | 3300005093 | Soil | VKEGLFYVRRHTCADGSFEWYVLNVHTRRRASKFFPTRAAAAAERAKLQVKLDLAKEQVLRRTPKGSAVMPTRAERHSSR* |
| Ga0070670_1000541532 | 3300005331 | Switchgrass Rhizosphere | MLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP* |
| Ga0068869_1005766831 | 3300005334 | Miscanthus Rhizosphere | VKEGLFYVRRHRCADGSFEWYVLNGHTRRRASKFFPTRAAAAAERAKLQVKLDLAKEQVLRRTPKGSAVMPTRAERHSSR* |
| Ga0070666_102525252 | 3300005335 | Switchgrass Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKTFPTRAAAAAERRKLQVKLDLAKEQILRRRPKAATRPQKYRTSGPR* |
| Ga0070689_1003904881 | 3300005340 | Switchgrass Rhizosphere | IRAALAGGGEMLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAVAERGEVQVKLELAKEQVLKRTLTRTGPQKYRTSGPR* |
| Ga0070689_1018322641 | 3300005340 | Switchgrass Rhizosphere | IRAALAGGGEMLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTP* |
| Ga0070687_1002583921 | 3300005343 | Switchgrass Rhizosphere | FYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAVAERGEVQVKLELAKEQVLKRTLTRTGPQKYRTSGPR* |
| Ga0070687_1006099731 | 3300005343 | Switchgrass Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASNFFPTRAAAAAEREKLQTRLDLAKAKVLRRAPKGARPTPGPQK* |
| Ga0070661_1009961261 | 3300005344 | Corn Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKTFPTRAAAAAERRKLQVKLDLAKEQILRRRPKA |
| Ga0070668_1017663031 | 3300005347 | Switchgrass Rhizosphere | IRAALAGGGEMLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP* |
| Ga0070674_1004691873 | 3300005356 | Miscanthus Rhizosphere | GGEMLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTP* |
| Ga0070667_1001642512 | 3300005367 | Switchgrass Rhizosphere | MLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTLTRTGPQKYRTSGPR* |
| Ga0070701_113649701 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | FYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTP* |
| Ga0070685_100086031 | 3300005466 | Switchgrass Rhizosphere | HTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTP* |
| Ga0070695_1017239992 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | FAAIRRRINCNDGRTVKAGLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP* |
| Ga0068864_1002836711 | 3300005618 | Switchgrass Rhizosphere | VRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTP* |
| Ga0068858_1004315861 | 3300005842 | Switchgrass Rhizosphere | MLFYVRRHTCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERAKLQVKLELAKEQVLKRT |
| Ga0068860_1025121341 | 3300005843 | Switchgrass Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKTFPTRAAAAAERRKLQVKLDLAKEQVLRRTPKGSAVKPTR |
| Ga0075365_100970922 | 3300006038 | Populus Endosphere | LGAVKQLFYVRRHTCADGSFGWYVLNGHTLRRVGKPFPTRAKAEAERAILQAKLDLAKAQVLRRTPKG* |
| Ga0070712_1020448091 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKFFPTRAAAAAERAKLQVKLDLAKEQVLRRTPKGAGPTPGPQK* |
| Ga0074053_117755432 | 3300006575 | Soil | PAQDQPHDGRAVKEGLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP* |
| Ga0074054_121685152 | 3300006579 | Soil | FYVRRHTCADGSFEWYVLNGHTRRPASKHFPTRAAAVAERAKLQVKLELAKEQVLKRTLTRTGPQKYRTSGPR* |
| Ga0074048_134918871 | 3300006581 | Soil | LFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP |
| Ga0068865_1020267361 | 3300006881 | Miscanthus Rhizosphere | MLFYVRRHTGADGSFERYVLNGHTRRRASRSFPTRAAAAAQRTKLQARLDLAMAKVLRRAPEGFKIT |
| Ga0074063_142864762 | 3300006953 | Soil | MLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAVAERGELQVKLELAKEQVLKRTLTRTGPQKYRTSGPR* |
| Ga0105240_123318931 | 3300009093 | Corn Rhizosphere | AIRRRINCNDGRTVKAGLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP* |
| Ga0111539_103442544 | 3300009094 | Populus Rhizosphere | MLFYVRRHTCADGSFEWYVLNGDTRRPASKLFRTRAAAAAARRKLQTNRDIAKAKVLRRTPNSPSDAGGAKGGPR* |
| Ga0105245_109887673 | 3300009098 | Miscanthus Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKFFPTRAAAAAERAKLQVKLDLAKEQVLRRTPKGSAVMPTRAERHSSR* |
| Ga0111538_121861503 | 3300009156 | Populus Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASRSFPTRAAAAAERAKLQVKLDLAKAKVLRRLPEG |
| Ga0126311_107836821 | 3300010045 | Serpentine Soil | MLLLFYVRRQMGADGSFEWYVLNGHTRRRASKFFPTRAAAAAERAKLQVKLDLAKEQVLRRTPKAPL* |
| Ga0126319_11013102 | 3300010147 | Soil | VKEGLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP* |
| Ga0105239_112521212 | 3300010375 | Corn Rhizosphere | MLFYVRRHTGADDSFEWYVLNGHMRRRASKFFPTRVAAAAEREKLQARLDLAKAKVLRASAGRLRSG* |
| Ga0134122_120354401 | 3300010400 | Terrestrial Soil | MLFYVRRHTGADGSFEWYVLNGHTRRRASNFFPTRAAAAAERAKLQVKLDLAKEQVLRRTPKGSAVKPTRAGR* |
| Ga0134123_115582281 | 3300010403 | Terrestrial Soil | VKEGLFYVRRHTCADGFEWYVLNGHIRRPASKLFRTRAAAAAERTRLQVKLELAKEQVLK |
| Ga0138505_1000404301 | 3300010999 | Soil | VRRHTCADGSFEWYVLNGHTLRRVGKPFPTRAKAEAERAILQAKLDLAKAQVLKGPKKSL |
| Ga0150985_1016805791 | 3300012212 | Avena Fatua Rhizosphere | MLFHVRRHTCADGSFEWYVLNGTRRPASKFFPNRVQAAAERRKLQVRLDLAKAKVLRRTPAVGS* |
| Ga0150985_1081595162 | 3300012212 | Avena Fatua Rhizosphere | LFYVRRHTCADGSFEWFVLNGHTRRRASKPFPTRAAAVAELRKLQAKVELAKAKVLKRTPKV* |
| Ga0150985_1125302423 | 3300012212 | Avena Fatua Rhizosphere | VKEELFYVRRHTSADGSFEWYVLNGHTRRPASKFFLTRARAAAERRKLHVRLDLAKAEVLRRAPRGLQRPARKK* |
| Ga0150985_1153280701 | 3300012212 | Avena Fatua Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKSFSTREAAAAERRKLQVKLDLAKEQVLRRTPKGSAVKPTRAGP* |
| Ga0150985_1216110701 | 3300012212 | Avena Fatua Rhizosphere | VGEVMLFYVRRHTCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKLQLRLDLAKAKVLRTTPTGAKRLRP* |
| Ga0150984_1063819341 | 3300012469 | Avena Fatua Rhizosphere | MLFYVRRHTCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKLQLRLDLAKAKVLRTTPTGAKRLRP* |
| Ga0150984_1090087712 | 3300012469 | Avena Fatua Rhizosphere | MLFYVRRHTCADGSFEWYVLNGHTRRRASKTFPTRAAAVAERAKLQVKLDLAKEQVLRRTPKGSAVKPTRAGP* |
| Ga0150984_1124227361 | 3300012469 | Avena Fatua Rhizosphere | VKEELFYVRRHTSADGSFEWYVLNGHTRRPASKFFPTRARAAAERRKLHVRLDLAKAEVLRRAPRGLQRPARKK* |
| Ga0157286_102230312 | 3300012908 | Soil | RAVKEGLFYVRRHTCADGFEWYVLNGHIRRPASKLFRTRAAAAAERTRLQVKLELAKEQVLKRTP* |
| Ga0162650_1000513051 | 3300012939 | Soil | LEAVKKLFYVRRHTCADGSFEWYVLNGHTLRRVGKPFPTRAKAEAERAILQAKLDLAKAQVLRRTPKG* |
| Ga0164300_101520601 | 3300012951 | Soil | RINRNDGRAVKEGLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTP* |
| Ga0164303_104731033 | 3300012957 | Soil | FYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP* |
| Ga0164302_100930231 | 3300012961 | Soil | RHTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTP* |
| Ga0164302_103039902 | 3300012961 | Soil | MLFYVRRHTGADGSFEWYVLNGHTRRRASKSFSTREAAAAERRKLQVKLDLAKEQVLRRTPKGPAVKPTRAGP* |
| Ga0164308_121953862 | 3300012985 | Soil | MLFYVRRHTGADGSFEWYVLNGHARRRGSTTFPTRAAAAAERQKLQVKLDLAKTKVLRGAPKGAGPTPGPQK* |
| Ga0164307_107390313 | 3300012987 | Soil | TRRGINRNDGRAVKEGLFYVRRHTCADGSFEWYVLNGNTRRAESKLFRTRAAERARLQVKLELAKEQVLKRTP* |
| Ga0157378_105130202 | 3300013297 | Miscanthus Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKTFPTRAAAAAERRKLQVKLDLAKEQILRRRPKAATRPQKYRTSGRR* |
| Ga0163162_118589682 | 3300013306 | Switchgrass Rhizosphere | VKEGLFYVRRHTCADGFEWYVLNGHIRRPASKLFRTRAAAAAERTRLQVKLELAKEQVLKRTP* |
| Ga0163163_131816212 | 3300014325 | Switchgrass Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASNFFPTRAAAAAEREKLQTRLDLAKAKVLRRAPEGR* |
| Ga0132256_1002717514 | 3300015372 | Arabidopsis Rhizosphere | MLFYVRRHTCADGSFEGYVLNGHTRRPESNLFRTRAAAAAERARLQVKLELAREQVLKRTP* |
| Ga0132257_1006595952 | 3300015373 | Arabidopsis Rhizosphere | VRRHTCADGSFEWYVLNGHTRRRASKFFPTRAAAAAERAKLQVKLDLAQEQVLRRTP |
| Ga0163161_107708752 | 3300017792 | Switchgrass Rhizosphere | MLFYVRRHTGADDSFEWFVLNGHMRRRASKFFPTRVAAAAEREKLQARLDLAKAKVLRA |
| Ga0190266_102348141 | 3300017965 | Soil | VKDEIFYVRRHTCADGSFEWYVLNGHTRRRASKLFRTRAAAAAARRKLQTKRDIAKAKVLRRVSNSPSDAGGAKGGPR |
| Ga0190266_108159372 | 3300017965 | Soil | MLFYVRRHTCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERAKLQVKLELAKEQVLKRTLTRTGPQKYRTSGPR |
| Ga0190266_113383961 | 3300017965 | Soil | GGGGLGAVKEGLFYVRRHDCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKLQLRLDLAKAKVLRTTPTGAKRLRP |
| Ga0184624_101733342 | 3300018073 | Groundwater Sediment | VKEGLFYLRRHDCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKLQLRLDLAKAKVLRRTPTGAKGLGP |
| Ga0184624_102810402 | 3300018073 | Groundwater Sediment | VKEGLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP |
| Ga0184624_102855782 | 3300018073 | Groundwater Sediment | VKEGVFYVRRHTCADGTFEWYILNGHTRRRASKFFPTRAAAVAERAKLEVKLSLAKEQVLRRTPKGSAVKPTRAGR |
| Ga0190270_111721581 | 3300018469 | Soil | VKQELFYVRRHTSGDGLFEWYVLNGNTRRRASRLFNTRTAAAAERRKLQARLNLAKLKVLRRR |
| Ga0190274_102071302 | 3300018476 | Soil | VKDEIFYVRRHTCADGSFEWYVLNGHTRRRASKLFRTRAAAAAARRKLQTKRDIAKAKVLRRTPNSPSDAGGAKGGPR |
| Ga0190274_119196421 | 3300018476 | Soil | MLFYVRRSTCADGSVEWYVLNGHTRRLASRTFPTREEAAAERERLQARLDLAKAEVLITRVPSTWPPK |
| Ga0193701_10292841 | 3300019875 | Soil | TCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERAKLQVKFELAKEQVLKRTLTRTGPQKYRTSGPR |
| Ga0210381_100809965 | 3300021078 | Groundwater Sediment | MLFYVRRHTCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERAKLQVKFELAKEQVLKRTLTRTGPQKYRTSGPR |
| Ga0222622_100568613 | 3300022756 | Groundwater Sediment | LGAVKEGLFYVRRHDCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKLQLRLDLAKAKVLRTTPTGAKRLRP |
| Ga0222622_102436821 | 3300022756 | Groundwater Sediment | MLFYVRRHTCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERAKLQVKFELAKEQVLKRTLTR |
| Ga0207688_100601852 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTP |
| Ga0207688_101726481 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | VKEGLFYGRRRDCADGSFEWYVLNGHTRRRTSKFFRTRAKAAAERRKLQLRLDLAK |
| Ga0207644_104265961 | 3300025931 | Switchgrass Rhizosphere | CADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP |
| Ga0207706_103176423 | 3300025933 | Corn Rhizosphere | MLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKR |
| Ga0207686_109236041 | 3300025934 | Miscanthus Rhizosphere | VKEGLFYVRRHTGADGSFEWYVLNGHTRRRASKFFPTRAAAVAERAKLQVKLELAQEQVLKRT |
| Ga0207709_107550661 | 3300025935 | Miscanthus Rhizosphere | VKAGLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP |
| Ga0207669_119491351 | 3300025937 | Miscanthus Rhizosphere | MLFYVRRHTGADDSFEWFVLNGHMRRRASKFFPTRVAAAAEREKLQARLDLAKAKVLRASAGRLRSG |
| Ga0207651_114627311 | 3300025960 | Switchgrass Rhizosphere | GLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTP |
| Ga0207668_110264672 | 3300025972 | Switchgrass Rhizosphere | VKEGLFYVRRHDCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKLQLRLDLAKAKVLRTPTGAKGLRR |
| Ga0207678_105227751 | 3300026067 | Corn Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHARRRASKFFPTRAAAAAERAKLQVKLDLAQEQVLRRTPKGGRADPGPQK |
| Ga0207678_107270141 | 3300026067 | Corn Rhizosphere | RRHTCADGSFEWYVLNGHTRRPASKLFRTRAAERARLQVKLELAKEQVLKRTP |
| Ga0207702_117975623 | 3300026078 | Corn Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKTFPTRAAAAAERRKLQVKLDLAKEQILRRRPKAATRPQKY |
| Ga0207648_120537281 | 3300026089 | Miscanthus Rhizosphere | DGSFEWYDVLNGHTRRPASKSFRTRAAAAAERARLQVKLELAKEQVLKRTP |
| Ga0207648_120989321 | 3300026089 | Miscanthus Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKTFPTRAAAAAERRKLQVKLDLAKEQILRRRPKAAT |
| Ga0208637_10113951 | 3300027401 | Soil | CNDGRTVKAGLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP |
| Ga0209382_116620421 | 3300027909 | Populus Rhizosphere | LGAVKQLFYVRRHTCADGSFEWYVLNGHTLRRVGKPFPTRAKAEAERAILQAKLDLAKAQVLRR |
| Ga0268264_111263021 | 3300028381 | Switchgrass Rhizosphere | MLFYVRRHTGADGSFEWYVLNGHTRRRASKTFPTRAAAAAERRKLQVKLDLAKEQILRRRPKAATRPQKYRTSGPRSV |
| Ga0307295_100128052 | 3300028708 | Soil | VKEGLFYVRRHDCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKLQLRLDLAKAKVLRTTPTGAKRLRP |
| Ga0307311_100064874 | 3300028716 | Soil | RHTCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERAKLQVKFELAKEQVLKRTLTRTGPQKYRTSGPR |
| Ga0307318_101412611 | 3300028744 | Soil | AGGGEMLFYVRRHTCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERAKLQVKFELAKEQVLKRTLTRTGPQKYRTSGPR |
| Ga0307297_100834671 | 3300028754 | Soil | MLFYVRRHTCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERAKQVKFELAKEQVLKRTLTRTGPQKYRTSGPR |
| Ga0307280_103010373 | 3300028768 | Soil | DGSFEWYVLNGHTRRRTSKFFPTRAKAAAELRKLQLRLDLAKAKVLRRTPTGAKGLGP |
| Ga0307282_102671641 | 3300028784 | Soil | VKEGVFYVRRNTCAEGSFEWYVLNGHTRRRASNFFLTRAAAAAERAKLQAKLDLAKAQVPPGERRKVEC |
| Ga0307323_103441982 | 3300028787 | Soil | FRAAPAGGGEMLFYVRRHTCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERAKLQVKFELAKEQVLKRTLTRTGPQKYRTSGPR |
| Ga0307287_100281698 | 3300028796 | Soil | MLFYVRRHTCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERANLQVKLELAKEQVL |
| Ga0307287_102256952 | 3300028796 | Soil | PHDERAVKGGLFYVRRHTCADGSFEWYVLNGHTRRPASKLFRTRAAAAAERARLQVKLELAKEQVLKRTP |
| Ga0307503_105226202 | 3300028802 | Soil | VNQGLFYVRRHTCTDGSFEWYVLNGHTRRRASNFFPTRPAAVAERRKLQGKVDLAKAKVLKRTPKV |
| Ga0307294_101298201 | 3300028810 | Soil | VKEGLFYVRRHDCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKSQLRLDLAKAKLFRRT |
| Ga0307302_101360494 | 3300028814 | Soil | VKEGVFYVRRNTCAEGSFEWYVLNGHTRRRASNFFLTRAAAAAERAKLQAKLYLAKAQVPPGERRKVEC |
| Ga0307312_104068602 | 3300028828 | Soil | VKEGLFYVRRHDCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKLQLRLDLAKAKVLRTTPTGAKRL |
| Ga0307286_100809062 | 3300028876 | Soil | VKEGLFYVRRHDCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAELRKLQLRLDLAKAKVLRRTPTGAKGLGP |
| Ga0307308_103011091 | 3300028884 | Soil | TCAEGSFEWYLLNDHTRRRASNFFLTRAAAAAERAKLQAKLDLAKAQVPPGERRKVEC |
| Ga0307304_104455022 | 3300028885 | Soil | VKEGLFYVRRHDCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKSQLRLDLAKAKLLRRTLKGAKGLRP |
| Ga0307499_101438982 | 3300031184 | Soil | VRRHTCADGAFEWYVMNGHTRRRASKHFPTRAAAVAERAKLQVKLELAKEQVLKRTLTRTGPQKYRTSGPR |
| Ga0307500_102285461 | 3300031198 | Soil | LGAVKEGLFYVRRHDCADGSFEWYVLNGHTRRRTSKFFPTRAKAAAERRKLQLRLDLVKAKVLRTTPTGAKRLRP |
| Ga0307500_102865332 | 3300031198 | Soil | MLFYVRRHTCADGSFEWYVLNGHTRRRTSKIFPTRAKAAAERRKLQVRLDLNRPGF |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |