Metagenome / Metatranscriptome Family F090660

Basic Information
Family ID	F090660
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	39 residues
Representative Sequence	MATLATATEKKAQMNADEKPERKPQRGRVDDKFKIFCGT
Number of Associated Samples	102
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.74 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Most Common Taxonomy
Group	Bacteria (91.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.185 % of family members)
Environment Ontology (ENVO)	Unclassified (18.519 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.074 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.43% β-sheet: 0.00% Coil/Unstructured: 86.57%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF08544	GHMP_kinases_C	86.11
PF00781	DAGK_cat	0.93
PF01557	FAA_hydrolase	0.93
PF05875	Ceramidase	0.93
PF13419	HAD_2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.26 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.48 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.48 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ01DCDZC	Not Available	541	Open in IMG/M
3300000567\|JGI12270J11330_10151157	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300001661\|JGI12053J15887_10312765	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300001915\|JGI24741J21665_1042887	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005184\|Ga0066671_10419708	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005332\|Ga0066388_103145196	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300005434\|Ga0070709_10537735	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005439\|Ga0070711_100380974	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300005459\|Ga0068867_100291599	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005529\|Ga0070741_11089995	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005538\|Ga0070731_10418117	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005541\|Ga0070733_10861393	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005542\|Ga0070732_10301698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	962	Open in IMG/M
3300005553\|Ga0066695_10724298	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005554\|Ga0066661_10329439	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300005566\|Ga0066693_10423873	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005615\|Ga0070702_101790916	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005718\|Ga0068866_10961301	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005842\|Ga0068858_101651785	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005895\|Ga0075277_1031695	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300006028\|Ga0070717_10265093	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300006102\|Ga0075015_100513655	Not Available	691	Open in IMG/M
3300006176\|Ga0070765_100344782	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300006354\|Ga0075021_10084529	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300006354\|Ga0075021_10995719	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300007258\|Ga0099793_10291369	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300009092\|Ga0105250_10097674	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300009162\|Ga0075423_12194664	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300010043\|Ga0126380_10352782	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300010043\|Ga0126380_10802094	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300010048\|Ga0126373_10125738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2405	Open in IMG/M
3300010358\|Ga0126370_10826102	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300010359\|Ga0126376_12166158	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300010360\|Ga0126372_10449131	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300010361\|Ga0126378_11020296	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300010361\|Ga0126378_11322081	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300010373\|Ga0134128_12392251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300010373\|Ga0134128_12521894	Not Available	567	Open in IMG/M
3300010376\|Ga0126381_104103429	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010401\|Ga0134121_11921448	Not Available	622	Open in IMG/M
3300011060\|Ga0138583_1056064	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300011089\|Ga0138573_1085327	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300011090\|Ga0138579_1225587	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300011120\|Ga0150983_13915336	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300011120\|Ga0150983_16087493	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300011271\|Ga0137393_11475949	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012350\|Ga0137372_10770582	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300012357\|Ga0137384_10307429	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300012487\|Ga0157321_1031903	Not Available	542	Open in IMG/M
3300012923\|Ga0137359_10343421	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300012924\|Ga0137413_11170583	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300012925\|Ga0137419_10555365	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300012957\|Ga0164303_10685126	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300012958\|Ga0164299_10455885	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300012960\|Ga0164301_10101852	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300012975\|Ga0134110_10582594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300013105\|Ga0157369_11202058	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300015358\|Ga0134089_10185070	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300015359\|Ga0134085_10465889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300017993\|Ga0187823_10044718	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300018433\|Ga0066667_11020690	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300019275\|Ga0187798_1505002	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300019879\|Ga0193723_1052137	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300020582\|Ga0210395_11384441	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300021088\|Ga0210404_10282601	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300021151\|Ga0179584_1160144	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300021445\|Ga0182009_10216394	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300021478\|Ga0210402_10420815	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300021559\|Ga0210409_10562222	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300021861\|Ga0213853_10619289	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300022525\|Ga0242656_1085949	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300022533\|Ga0242662_10043515	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300022557\|Ga0212123_10028190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5896	Open in IMG/M
3300022720\|Ga0242672_1037511	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300025711\|Ga0207696_1110511	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300025898\|Ga0207692_10725273	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300025906\|Ga0207699_10032217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2952	Open in IMG/M
3300025906\|Ga0207699_10935742	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300025907\|Ga0207645_10001345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	20168	Open in IMG/M
3300025913\|Ga0207695_10255145	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300025914\|Ga0207671_10956134	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300025916\|Ga0207663_10085301	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300025928\|Ga0207700_10074593	All Organisms → cellular organisms → Bacteria	2625	Open in IMG/M
3300025944\|Ga0207661_11678634	Not Available	580	Open in IMG/M
3300025981\|Ga0207640_10149940	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300025987\|Ga0208906_1026724	Not Available	511	Open in IMG/M
3300026142\|Ga0207698_11249403	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300026296\|Ga0209235_1283113	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300026315\|Ga0209686_1021666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2547	Open in IMG/M
3300026523\|Ga0209808_1120873	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300027371\|Ga0209418_1034668	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300027867\|Ga0209167_10521377	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300029984\|Ga0311332_10086181	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300030545\|Ga0210271_10119973	Not Available	664	Open in IMG/M
3300030990\|Ga0308178_1063063	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300031057\|Ga0170834_105933069	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1111266	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300031446\|Ga0170820_16343852	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300031474\|Ga0170818_115405922	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300031681\|Ga0318572_10197117	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300031708\|Ga0310686_104799280	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300031754\|Ga0307475_10213862	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300031770\|Ga0318521_10018731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3184	Open in IMG/M
3300031820\|Ga0307473_10729098	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031938\|Ga0308175_100287711	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300032042\|Ga0318545_10276606	Not Available	603	Open in IMG/M
3300032119\|Ga0316051_1029803	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300032180\|Ga0307471_102732706	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.04%
Host-Associated	Host-Associated	12.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.48%
Plants	Host-Associated → Plants	12.96%
Aquatic	Environmental → Aquatic	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.48%
Sediment	Environmental → Aquatic → Sediment	2.78%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Peat	Environmental → Terrestrial → Peat	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.11%
Loam	Environmental → Terrestrial → Soil → Loam	15.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.85%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.85%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.93%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001915	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7	Host-Associated	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011060	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025987	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_203 (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_08452980	2170459024	Grass Soil	MATLGTPAEKKGQQVPEEKGERKPRPRVDDKFKIFSGTAN
JGI12270J11330_101511571	3300000567	Peatlands Soil	MATLATATEKKAQMSADEKPERKPQRSRADDKFKIFCGTAN
JGI12053J15887_103127653	3300001661	Forest Soil	MATLATVTEKKPQVGADEKTERKPQRGRVDDKFKI
JGI24741J21665_10428871	3300001915	Corn Rhizosphere	MSTVATATDKKAHMGTDEKPERKLQRARVDDKFKI
Ga0066671_104197083	3300005184	Soil	MAIATATEKKPLMSPDEKSERKPQRARVDDKFKIFCGTANEPLCD
Ga0066388_1031451961	3300005332	Tropical Forest Soil	MATLVTPPEKKGQQVTEEKPERKVRPRVDEKFKIFSGTAN
Ga0070709_105377351	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MATLATATEKKAQMSADEKPERKPQRGRVDDRFKIFCGTA
Ga0070711_1003809741	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MATVATASEKSQMTTDDKPERKPQRARVDDKFKIFCGTAN
Ga0068867_1002915993	3300005459	Miscanthus Rhizosphere	MATLATATEKKPHMGSDEKTERKPLRSRVDDRFKIFCGTANPALCDD
Ga0070741_110899951	3300005529	Surface Soil	MATLATATEKKATMSPDEKPERKPQRARVDDKFKIFCG
Ga0070731_104181173	3300005538	Surface Soil	MATLATATEKKIGAEDKRERKPQRARVDDKFKIFCGTANQP
Ga0070733_108613933	3300005541	Surface Soil	MATLATATEKKPMGPEEKTERKPQRARVDEKFKIFCGTANVP
Ga0070732_103016983	3300005542	Surface Soil	MATLVTPTEKKVPAAPEEKGDRRGRSRVDEKFKIFSGTANEP
Ga0066695_107242981	3300005553	Soil	MATFATATDKKAHMSADDKSERKPHRARVDDKFKIFC
Ga0066661_103294393	3300005554	Soil	MATLATATEKKTIGMSADEKHERKPHRVRVDDKFKIFCGTANQP
Ga0066693_104238733	3300005566	Soil	MATLATATEKKAHMGVDEKSERKPQRARVDDKFKI
Ga0070702_1017909163	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MATLATTTEKKTHVNADEKPERKPQRPRVDDRFKIFCGTAN
Ga0068866_109613011	3300005718	Miscanthus Rhizosphere	MATLATATEKKPHLGSDEKTERKPFRSRVDDRFKIFC
Ga0068858_1016517851	3300005842	Switchgrass Rhizosphere	MATLATATEKKAQMNADEKAERKPQRGRVDDKFKIFCGTA
Ga0075277_10316951	3300005895	Rice Paddy Soil	MATLATATEKKPQMSADEKPERKPVRARVDDKFKIF
Ga0070717_102650931	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATITVTAEKKMTPDEKPAHKPHRARVDDKFKIFCG
Ga0075015_1005136551	3300006102	Watersheds	MATLATPAEKKGQQVPEEKSERKPRPRVDDKFKIFCGTA
Ga0070765_1003447823	3300006176	Soil	MATLATATEKKPHTGAEEKSERKPQRGRVDDKFKIFS
Ga0075021_100845294	3300006354	Watersheds	MATLATQTEKKAPMNPDEKPERRPQRARVDDKFKIFCGTANEAL
Ga0075021_109957191	3300006354	Watersheds	MATLVTATEKKAQMSTDEKPERKPQRVRVDDKLKIFCGTA
Ga0099793_102913693	3300007258	Vadose Zone Soil	MATLATATEKKAHLGVDEKSERKPQRARVDDKLKIFCGTAN
Ga0105250_100976743	3300009092	Switchgrass Rhizosphere	MSTVATATDKKAHMGTDEKPERKLQRARVDDKFKIFC
Ga0075423_121946643	3300009162	Populus Rhizosphere	MATLATATEKKAQMNADEKAERKPQRGRVDDKFKIFCG
Ga0126380_103527821	3300010043	Tropical Forest Soil	MATLATPAEKKGQQVPEEKSERKPRPRVDEKFKIF
Ga0126380_108020941	3300010043	Tropical Forest Soil	MATTIATAEKKMTPEEKPAHKPHRARVDDKFKIFCGTANPDL
Ga0126373_101257381	3300010048	Tropical Forest Soil	MPSFAATAEKKMSADEKHERKPQRARVDDKFKIFCGT
Ga0126370_108261023	3300010358	Tropical Forest Soil	MSTLAATAEKKMSADEKHERKPQRARVDDKFKIFCGTANQP
Ga0126376_121661583	3300010359	Tropical Forest Soil	MSTVATATEKKPHMSADEKTERKPQRARVDDKFKIFCGT
Ga0126372_104491311	3300010360	Tropical Forest Soil	MATLVTPPEKKGQQVTEEKPERKVRPRVDEKFKIFSGT
Ga0126378_110202963	3300010361	Tropical Forest Soil	MATLAATAEKKMSADEKHERKPQRARVDDKFKIFCG
Ga0126378_113220813	3300010361	Tropical Forest Soil	MATLATTAEKKGRLGAEEKPERKPQRARVDDKFKIFCGTA
Ga0134128_123922511	3300010373	Terrestrial Soil	MATLATATEKKAHMSADEKSERKPQRARIDDKFKIF
Ga0134128_125218943	3300010373	Terrestrial Soil	MATLATAAEKKMIPDEKHDRKPQRARVDDKFKIFCGTANTPLAD
Ga0126381_1041034291	3300010376	Tropical Forest Soil	MATLATTAEKKGRLGAEEKPERKPQRARVDDKFKIFCGTANE
Ga0134121_119214481	3300010401	Terrestrial Soil	MSTVATATDKKAHMGTDEKTERKLQRARVDDKFKI
Ga0138583_10560641	3300011060	Peatlands Soil	MATLATATEKKPQMGAEEKSERKPQRGRVDDKFKIFS
Ga0138573_10853271	3300011089	Peatlands Soil	MATLATVTEKKAQMATEEKSERKPQRSRADDKFKIFSV
Ga0138579_12255871	3300011090	Peatlands Soil	MATLATATEKKAHMSAEEKPERKPQRSRVDDKFKIFCGTANE
Ga0150983_139153361	3300011120	Forest Soil	MATLATATEKKVQVSAEEKPERKPVRSRADDKFKIFSGTANE
Ga0150983_160874933	3300011120	Forest Soil	MATLATATEKKMSADEKPERKPHRARVDEKFKIFCGTANQPLAE
Ga0137393_114759493	3300011271	Vadose Zone Soil	MATLVTATEKKVQAGVDEKPERKPQRARVDDKFKIFCGTANESLAD
Ga0137372_107705823	3300012350	Vadose Zone Soil	MATLATATEKKPGMSPEEKHERKPHRARVDDKFKIFCGTANQP
Ga0137384_103074293	3300012357	Vadose Zone Soil	MATLATATEKKITGMSADEKHERKPHRVRVDDKFKIFCGTANQ
Ga0157321_10319031	3300012487	Arabidopsis Rhizosphere	MSTVATATDKKAHMGTDEKPERKLQRARVDDKFKIFCGTANEALA
Ga0137359_103434211	3300012923	Vadose Zone Soil	MATLATAAEKKMSSEEKHERKPHRARVDDKFKIFCG
Ga0137413_111705831	3300012924	Vadose Zone Soil	MATLATTTEKKTHVNADEKPERKPQRPRVDDKFKIFCGT
Ga0137419_105553651	3300012925	Vadose Zone Soil	MATLATATEKKAQMSADEKPERRPQRGRVDDRFKI
Ga0164303_106851261	3300012957	Soil	MATITATAEKKMTPEEKPAHKPHRARVDDKFKIFCGTAN
Ga0164299_104558853	3300012958	Soil	MATLATATEKKMSATPEEKHERKPHRARIDDKFKIFSGT
Ga0164301_101018521	3300012960	Soil	MATFVFTTATTTEKKVQQPDSKPERKPQRAKADDKFKIFS
Ga0134110_105825943	3300012975	Grasslands Soil	MATLVTATEKKVQAGVDDKPERKPQRARVDDKFKIFCGTANEALA
Ga0157369_112020581	3300013105	Corn Rhizosphere	MATLATATEKKAQMNADEKAERKPQRGRVDDKFKIF
Ga0134089_101850701	3300015358	Grasslands Soil	MATLVTATEKKVQAGVDEKPERKPQRARVDDKFKIFCGTA
Ga0134085_104658893	3300015359	Grasslands Soil	MATLATATEKKITGMSADEKHERKPHRVRVDDKFKIFCGTANQPL
Ga0187823_100447183	3300017993	Freshwater Sediment	MATLVTPAEKKGQQVPEEKSERKVRPRVDEKFKIFSGTAN
Ga0066667_110206903	3300018433	Grasslands Soil	MATLATATEKKAHMSADEKPERKPHRGRVDDKFKIFCGTAN
Ga0187798_15050021	3300019275	Peatland	MATLATATEKKSQMSPEEKPERKPARLRVDDKFKIFSGT
Ga0193723_10521371	3300019879	Soil	MATLATATEKKAHMGVDEKSERKPQRARVDDKFKIFCG
Ga0210395_113844411	3300020582	Soil	MATVATVTKAQVGTEEKSERKPQRGRADDKFKIFS
Ga0210404_102826013	3300021088	Soil	MATLATPAEKKGQQVPEEKGERSKPRPRVDDKFKIFCGTANEALADEVC
Ga0179584_11601443	3300021151	Vadose Zone Soil	MATLATATEKKAQMSADEKPERKPQRGRVDDRFKIFCGTANEPLCD
Ga0182009_102163941	3300021445	Soil	MAIATATEKKPLMSPDEKSERKPQRARVDDKFKIF
Ga0210402_104208153	3300021478	Soil	MATLATPAEKKGQQVPEDKSERKPQRPRVDDKFKIFCGTAN
Ga0210409_105622223	3300021559	Soil	MATLATPAEKKGQQVPEEKGERKPRPRVDEKFKIFCGTAN
Ga0213853_106192891	3300021861	Watersheds	MATLATATEKKSQPVSDERPERKPQRTRVDDKFKIFCGTA
Ga0242656_10859493	3300022525	Soil	MATLATVTEKKAQVGAEEKPERKPQRSRADDKFKIFSGTANEA
Ga0242662_100435153	3300022533	Soil	MATLATPAEKKGQQVPEEKSERNRPARPRVDEKFKIF
Ga0212123_100281901	3300022557	Iron-Sulfur Acid Spring	MATLATATEKKMSADEKHERKPHRARVDEKFKIFC
Ga0242672_10375111	3300022720	Soil	MATLATPAEKKGQQVPEDRAERKPRPRVDEKFKIFCGTANEALTD
Ga0207696_11105113	3300025711	Switchgrass Rhizosphere	MSTVATATDKKAHMGTDEKPERKLQRARVDDKFKIFCGTAN
Ga0207692_107252733	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MATLATATEKKAHMSADEKAERKPQRTRVDDKFKIFCGT
Ga0207699_100322175	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MATLATPAEKKGQQVPEEKSERNRPARPRVDEKFKIFSGTAN
Ga0207699_109357423	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MATLATATEKKAQMNADEKPERKPQRGRVDDKFKIFCG
Ga0207645_1000134523	3300025907	Miscanthus Rhizosphere	MSTVATATDKKAHMGTDEKPERKLQRARVDDKFKIFCG
Ga0207695_102551453	3300025913	Corn Rhizosphere	MATLATATEKKMSPDEKHDRKPHRARVDDKFKIFC
Ga0207671_109561343	3300025914	Corn Rhizosphere	MATLATATEKKAQMNADEKAERKPQRGRVDDKFKIFC
Ga0207663_100853014	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MATLATPAEKKGQQVPEEKSERNRPARPRVDEKFKIFSGTANE
Ga0207700_100745935	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MATLATAAEKKMSADEKHDRKPQRVRVDDKFKIFCG
Ga0207661_116786341	3300025944	Corn Rhizosphere	MATLATAAEKKMSADEKHDRKPQRVRVDDKFKIFCGMANMP
Ga0207640_101499404	3300025981	Corn Rhizosphere	MATLATAAEKKMNADEKHDRKPQRVRVDDKFKIFCGTANM
Ga0208906_10267243	3300025987	Rice Paddy Soil	MATVAPAAEGKMQQSEPKVDRRPQRARVDEKFKIFCGTANPQLAE
Ga0207698_112494033	3300026142	Corn Rhizosphere	MAIATATEKKPLMSPDEKSERKPQRARVDDKFKIFCGTA
Ga0209235_12831133	3300026296	Grasslands Soil	MATLVTATEKKVQAGVDEKPERKPQRARVDDKFKIFCGTAN
Ga0209686_10216661	3300026315	Soil	MATLATTADKKAPVSPEEKPERKPQRSRVDDKFKIFCGT
Ga0209808_11208733	3300026523	Soil	MATLATATDKKMSPDEKHERKPHRARVDEKFKIFCGTAN
Ga0209418_10346681	3300027371	Forest Soil	MATLATPAEKKGQQVPEEKSERKPVRARVDDKFKIFCGTANEP
Ga0209167_105213773	3300027867	Surface Soil	MATLATVTEKKAQVGADEKSERKPQRGRVDDKFKIFSG
Ga0311332_100861811	3300029984	Fen	MATLATATEKKAQMTPDEKPERKVQRGRVDDKFKIFCGTANEPLC
Ga0210271_101199731	3300030545	Soil	MATLATATEKAADKKAPAGPDDKPERKPQRARVDDKFKIFC
Ga0308178_10630631	3300030990	Soil	MATLATATEKKPHMSSDEKAERKPQRSRVDDRFKIF
Ga0170834_1059330691	3300031057	Forest Soil	MATLATATEKKVAISPDEKTERKPQRGRVDDKFKIFCGTANE
(restricted) Ga0255312_11112661	3300031248	Sandy Soil	MATLATATEKKAQMNADEKPERKPQRGRVDDKFKIFCGT
Ga0170820_163438523	3300031446	Forest Soil	MATLVTTTEKKTGVSAEEKHERKPHRGRVDDKLKKKE
Ga0170818_1154059223	3300031474	Forest Soil	MATLATATEKKMIPDDKHERKPHRARVDDKFKVFCGTANQPLAD
Ga0318572_101971173	3300031681	Soil	MATLATPAEKKGQQVPEEKSERKARPRVDEKFKIFSGT
Ga0310686_1047992803	3300031708	Soil	MATLATATDKKALMGAEEKPERKPQRGRVDDKFKIFSGT
Ga0307475_102138621	3300031754	Hardwood Forest Soil	MATLATPAEKKGQQVPEEKSERKARPRVDDKFKIFCGTAN
Ga0318521_100187316	3300031770	Soil	MATLATPAEKKGQQVPEEKSERKARPRVDEKFKIFSGTANEALA
Ga0307473_107290981	3300031820	Hardwood Forest Soil	MATLATATEKKAHMSADEKPERKPHRGRVDDKFKIFCGTA
Ga0308175_1002877111	3300031938	Soil	MATLATAVEKKMSPDEKHAKPQRSRVDDKFKIFCGTA
Ga0318545_102766063	3300032042	Soil	MATLATPAEKKGQQVPEEKSERKARPRVDEKFKILSGTANEALADEV
Ga0316051_10298031	3300032119	Soil	MATLATVTEKKAQTVADDKSERKPQRSRADDKFKIF
Ga0307471_1027327061	3300032180	Hardwood Forest Soil	MATLATATDKKAQMSPDEKPERKPQRGRVDDRFKIFCG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters