NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F090624

Metagenome / Metatranscriptome Family F090624

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F090624
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 50 residues
Representative Sequence MSARIMSARNMSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID
Number of Associated Samples 95
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.93 %
% of genes from short scaffolds (< 2000 bps) 1.85 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (96.296 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.815 % of family members)
Environment Ontology (ENVO) Unclassified
(51.852 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(67.593 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84
1E41_11173930
2JGI24743J22301_101243052
3JGI24750J21931_10058372
4JGI24751J29686_101168422
5C688J35102_1181082972
6C688J35102_1202953782
7C688J35102_1209519345
8Ga0063454_1019395551
9Ga0066814_100393261
10Ga0066815_100768191
11Ga0066869_101115571
12Ga0070683_1002034942
13Ga0070690_1000651551
14Ga0070682_1006306902
15Ga0068868_1000268418
16Ga0070687_1000057478
17Ga0070692_105525021
18Ga0070671_1007890152
19Ga0070688_1000894033
20Ga0070678_1001905553
21Ga0070678_1012179042
22Ga0068867_1012584472
23Ga0070684_1014372491
24Ga0070702_1001617221
25Ga0068864_1014740662
26Ga0068851_101892573
27Ga0068863_1021542811
28Ga0075364_107726592
29Ga0075369_100432632
30Ga0075422_105253251
31Ga0075370_107481822
32Ga0074055_100040941
33Ga0074056_100136501
34Ga0074054_100194432
35Ga0074048_134974591
36Ga0074063_100848691
37Ga0074063_129167742
38Ga0105245_100706982
39Ga0105247_113192802
40Ga0105241_101558711
41Ga0105242_107592471
42Ga0105249_124547681
43Ga0126313_115441451
44Ga0126305_100848394
45Ga0151490_15750101
46Ga0150985_1197715855
47Ga0150985_1203268503
48Ga0150984_1106957291
49Ga0157349_10219232
50Ga0137394_114818752
51Ga0137413_107286601
52Ga0164300_103878112
53Ga0164299_110237112
54Ga0164304_115846441
55Ga0164306_101159874
56Ga0164306_102485622
57Ga0164305_100437823
58Ga0157374_109056111
59Ga0163162_114902361
60Ga0157377_100404634
61Ga0157377_110268232
62Ga0157379_100234618
63Ga0132258_102374395
64Ga0132256_1006303103
65Ga0132256_1010613523
66Ga0132257_1024639821
67Ga0132257_1041079552
68Ga0132255_1062731141
69Ga0184621_101233522
70Ga0184624_101154792
71Ga0190272_124654521
72Ga0190273_114382261
73Ga0173482_104825801
74Ga0193696_10958512
75Ga0247790_100829441
76Ga0207656_101949672
77Ga0207682_104743462
78Ga0207642_102123651
79Ga0207642_107005912
80Ga0207688_100038859
81Ga0207671_113605471
82Ga0207662_100085597
83Ga0207657_103777213
84Ga0207687_100667364
85Ga0207687_110522022
86Ga0207644_112876472
87Ga0207690_101656054
88Ga0207690_102810431
89Ga0207691_101226324
90Ga0207711_106276191
91Ga0207689_104998211
92Ga0207651_104342963
93Ga0207712_100078253
94Ga0207658_101299621
95Ga0207658_103997353
96Ga0207708_100020508
97Ga0207702_123739902
98Ga0207641_100495955
99Ga0207674_109988681
100Ga0179593_11361753
101Ga0268264_100278315
102Ga0307311_101554712
103Ga0307297_103827352
104Ga0307306_100712882
105Ga0307310_100902672
106Ga0307304_100543323
107Ga0307498_100009672
108Ga0307468_1017434492
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 61.54%    β-sheet: 0.00%    Coil/Unstructured: 38.46%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550MSARIMSARNMSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAIDExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
3.7%96.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Serpentine Soil
Unplanted Soil
Soil
Grass Soil
Hardwood Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Endosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
14.8%9.3%2.8%3.7%2.8%2.8%3.7%3.7%3.7%3.7%4.6%3.7%2.8%3.7%3.7%2.8%4.6%2.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_111739302170459005Grass SoilMSSRNVSSRNMSAGITSAHIVALLASPVARATFRQSRMRLCRRVRPPTGS
JGI24743J22301_1012430523300001991Corn, Switchgrass And Miscanthus RhizosphereMRARIMSARNMSAGIVSAQIIARLASLVAGLRATFRXSRMRLRRRVAHHGLAAID*
JGI24750J21931_100583723300002070Corn, Switchgrass And Miscanthus RhizosphereMSAGIVSAQIIARLASLVAGLRATFRXSRMRLRRRVAHHGLAAID*
JGI24751J29686_1011684223300002459Corn, Switchgrass And Miscanthus RhizospherePPACVRAGVGAQAMRARIMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
C688J35102_11810829723300002568SoilMRARMINARNMSAYIMPAHIIARLVSLAAELRATFRQSRMRLCRRVARHGLAAID*
C688J35102_12029537823300002568SoilMSAQIVNARIMSGHIVVLLVSLAAGLRAAFGRSRMRLCRRLAHHGLAAID*
C688J35102_12095193453300002568SoilMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0063454_10193955513300004081SoilMSAHVMSARCTSAHVVARLVSLAAGLRATFRRSRLRLCRRVARHGLAAID*
Ga0066814_1003932613300005162SoilMSARNMSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID*
Ga0066815_1007681913300005164SoilMSSRNVSSRNMSAGITSAHIVALLASPVARATFRQSRMRLCRRVAHHGLAAIG
Ga0066869_1011155713300005165SoilRPPACVRAGVGAQAMRARIMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0070683_10020349423300005329Corn RhizosphereMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0070690_10006515513300005330Switchgrass RhizosphereMRARIMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0070682_10063069023300005337Corn RhizosphereMSARNMSARNMSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0068868_10002684183300005338Miscanthus RhizosphereMSARNMSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0070687_10000574783300005343Switchgrass RhizosphereMSARNMSAGIVSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID*
Ga0070692_1055250213300005345Corn, Switchgrass And Miscanthus RhizosphereARIMSARNMSARNMSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0070671_10078901523300005355Switchgrass RhizosphereMSAGIVSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID*
Ga0070688_10008940333300005365Switchgrass RhizosphereRLVPRPPACVRAGVGAQAMRARIMSAGIVSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID*
Ga0070678_10019055533300005456Miscanthus RhizosphereMSARVMRAQVVALLVSVVAGLGAAFRQSRTRLCRRLARHGLAAIE*
Ga0070678_10121790423300005456Miscanthus RhizosphereMSARIMSARNMSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID*
Ga0068867_10125844723300005459Miscanthus RhizosphereMRARIMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0070684_10143724913300005535Corn RhizosphereNMSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0070702_10016172213300005615Corn, Switchgrass And Miscanthus RhizosphereMSAHLVSVRVMRAHVVGLLVSVVAGLGAAFRQSRTRLCRRLARHGLAAIE*
Ga0068864_10147406623300005618Switchgrass RhizosphereMSARVMRAHVVALLVSVVAGLGAAFRQSRTRLCRRLARHGLAAID*
Ga0068851_1018925733300005834Corn RhizosphereMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHYGLAAID*
Ga0068863_10215428113300005841Switchgrass RhizosphereSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID*
Ga0075364_1077265923300006051Populus EndosphereMRANVVALLVSVVAGLRAAFRQSRTRLYRRLARHGSQAID*
Ga0075369_1004326323300006186Populus EndosphereMRANVVALLVSVVAGLRAAFRQSRTRLYRRLARHGSQRID*
Ga0075422_1052532513300006196Populus RhizosphereAHVMRTRIVSAHVVTRLVPLVAGLRAAFRRSRIRLCRRVARHGLAAID*
Ga0075370_1074818223300006353Populus EndosphereMRAHSISARRMSARRMSARIVSAHIASAQIIARLAALAAGLRASFRRSRLRLCRRAAHNGLAAID*
Ga0074055_1000409413300006573SoilMSAGITGAHIVALLASPVARATFRQSCMRLCRRVAHHGLAAIG*
Ga0074056_1001365013300006574SoilRSGRITSAHIMRAHVVARLVSLAAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0074054_1001944323300006579SoilMSAGITSAHIVALLASPVARATFRQSRMRLCRRVAHHGLAAIG*
Ga0074048_1349745913300006581SoilMSARIMSARNMSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0074063_1008486913300006953SoilMSSRNVSSRNMSAGITSAHIVALLASPVARATFRQPRMRLCRRVAHHGLTAIG*
Ga0074063_1291677423300006953SoilMSARNMSSRTMTARANSARITRAHIMRAHVVARLVSLAAGLRATFRQSRTRLCRRLAHHGL*
Ga0105245_1007069823300009098Miscanthus RhizosphereMKAHTMRAHIARAHVVVRLVSLVAGLRAAFGQSRMRLCRRLARHGLAAID*
Ga0105247_1131928023300009101Switchgrass RhizosphereMTSRNMKAHTMRAHIARAHVVVRLVSLVAGLRAAFGQSRMRLCRRLARHGLAAID*
Ga0105241_1015587113300009174Corn RhizosphereMSARIMSARNMSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGL
Ga0105242_1075924713300009176Miscanthus RhizosphereMRAHNVSAHMSAHILTSRIVPLLASLVAALRASFRRSRLRLCRRASHHGLAAID*
Ga0105249_1245476813300009553Switchgrass RhizosphereKAHTMRAHIARAHVVVRLVSLVAGLRAAFGQSRMRLCRRLARHGLAAID*
Ga0126313_1154414513300009840Serpentine SoilMSAGILSAHIIARLASLVAGVRAAFRQSRTRLCRRMARHGLGAID*
Ga0126305_1008483943300010036Serpentine SoilSSRHVSARIVSAHVVTRLVPLVAGLRAAFRRSRMRLCRRVARHGLAAID*
Ga0151490_157501013300011107SoilMSANNMSSRNVSSRNMSAGITSAHIVALLASPVARATFRQSRMRLCRRVAHHGLAAIG*
Ga0150985_11977158553300012212Avena Fatua RhizosphereMINARNMSAYIMPAHIIARLVSLAAELRATFRQSRMRLCRRVARHGLAAID*
Ga0150985_12032685033300012212Avena Fatua RhizosphereMSAHLVSVRVMRAHVVGLLVSVVAGLGAAFRQSRTRLCRRLARHGLAAID*
Ga0150984_11069572913300012469Avena Fatua RhizosphereMTARIMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0157349_102192323300012489Unplanted SoilACVRAGVGAQAMRARIMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0137394_1148187523300012922Vadose Zone SoilMSADITSAHIVALLASPVARATFRQSRMRRRVAHHGLAAIG*
Ga0137413_1072866013300012924Vadose Zone SoilMTEHVMSAHFTARLASLMAGLRAAFRQSRMRLCRRLARHGL
Ga0164300_1038781123300012951SoilMSARAKSGRITSAHIMRAHVVARLVSLAAGLRAAFRQSRTRLCRRLAHHGL*
Ga0164299_1102371123300012958SoilMTAGANSARITRAHIMRAHVVARLVSLAAGLRAAFRQSRTRLCRRLAHHGL*
Ga0164304_1158464413300012986SoilMSARTMSAHIASAHIVALLVSLAARLRAAFRQSRMRLCRRVAHHGLAAIG
Ga0164306_1011598743300012988SoilMTAGANSARITRAHIMRAHVVARLVSLAAGLRATFRQSRTRLCRRLAHHGL*
Ga0164306_1024856223300012988SoilMSAGIVSAQIIARLASLVAGFRATFRQSRMRLRRRVAHHGLAAID*
Ga0164305_1004378233300012989SoilMTARANSARITRAHIMRAHVVARLVSLAAGLRAAFRQSRTRLCRRLAHHGL*
Ga0157374_1090561113300013296Miscanthus RhizosphereMSAQIIARLASLVAGLRATFRRSRMRLRRRVVHHGLAAID*
Ga0163162_1149023613300013306Switchgrass RhizosphereMKAHTMRAHIARAHVVVRLVSLVAGLRAAFGQSRMRLCRRLARHGLA
Ga0157377_1004046343300014745Miscanthus RhizosphereGVGAQAMSARIMSARNMSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID*
Ga0157377_1102682323300014745Miscanthus RhizosphereMSAGIVSAHIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0157379_1002346183300014968Switchgrass RhizosphereVGAQAMSARIMSARNMSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID*
Ga0132258_1023743953300015371Arabidopsis RhizosphereMSARAKSGRITSAHIMRAHVVARLVSLAAGLRATFRQSRTRLCRRLAHHGL*
Ga0132256_10063031033300015372Arabidopsis RhizosphereMSARIMSARNMSAGIVSAQIIARLVSLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0132256_10106135233300015372Arabidopsis RhizosphereMTARANSARITRAHIMRAHVVARLVSLAAGLRATFRQSRTRLCRRLAHHGL*
Ga0132257_10246398213300015373Arabidopsis RhizosphereQAMRARIMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID*
Ga0132257_10410795523300015373Arabidopsis RhizosphereMSARVMRAHVVALLVSVVAGLGAAFRQSRTRLCRRLARHGLAAIE*
Ga0132255_10627311413300015374Arabidopsis RhizosphereANNMSSRNASSRNMSAGITGAHIVALLASPVARATFRQSCMRLCRRVAHHGLAAIG*
Ga0184621_1012335223300018054Groundwater SedimentMSAHIVSARIMLAHIVALLVSLVAGLRAAFGQSRMRLCRR
Ga0184624_1011547923300018073Groundwater SedimentMTSCNMTSRHMSAHIVSARIMLAHIVALLVSLVAGLRAAFGQSRMRLCRRLARHGLAAID
Ga0190272_1246545213300018429SoilMNTHVMSARSMSAHVVVRLVSLAAGLRATFRRSRMRLCRRAARH
Ga0190273_1143822613300018920SoilNVSSSHRSAHIVSARSMSAHVVVRLVSLAAGLRATFRRSRMRLCRRVARHGLAAID
Ga0173482_1048258013300019361SoilMRARIMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID
Ga0193696_109585123300020016SoilMQHDLTSHAHIVALLVSLVAGLRAAFGQSRMRLCRRLARHGLAAID
Ga0247790_1008294413300022915SoilMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHG
Ga0207656_1019496723300025321Corn RhizosphereMSAGIVSAQIIARLASLVAGLRATFRQSRVRLRRRVAHHGLAAID
Ga0207682_1047434623300025893Miscanthus RhizosphereHVVGLLVSVVAGLGAAFRQSRTRLCRRLARHGLAAIE
Ga0207642_1021236513300025899Miscanthus RhizosphereMRARIMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRR
Ga0207642_1070059123300025899Miscanthus RhizosphereVGAQAMRARIMSARNMSAGIVSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID
Ga0207688_1000388593300025901Corn, Switchgrass And Miscanthus RhizosphereMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHYGLAAID
Ga0207671_1136054713300025914Corn RhizosphereMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHH
Ga0207662_1000855973300025918Switchgrass RhizosphereMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRL
Ga0207657_1037772133300025919Corn RhizosphereRAGVGAQAMRARIMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID
Ga0207687_1006673643300025927Miscanthus RhizosphereMRARIMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID
Ga0207687_1105220223300025927Miscanthus RhizosphereMRAHIARAHVVVRLVSLVAGLRAAFGQSRMRLCRRLARHGLAAID
Ga0207644_1128764723300025931Switchgrass RhizosphereRNMSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID
Ga0207690_1016560543300025932Corn RhizosphereMSARNMSAGIVSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID
Ga0207690_1028104313300025932Corn RhizosphereAMSARIMSARNMSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID
Ga0207691_1012263243300025940Miscanthus RhizosphereMSARIMSARNMSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID
Ga0207711_1062761913300025941Switchgrass RhizosphereMSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID
Ga0207689_1049982113300025942Miscanthus RhizosphereRIMSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID
Ga0207651_1043429633300025960Switchgrass RhizospherePRPPACVRAGVGAQAMRARIMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID
Ga0207712_1000782533300025961Switchgrass RhizosphereMSAGIVSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID
Ga0207658_1012996213300025986Switchgrass RhizosphereQAMRARIMSARNMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID
Ga0207658_1039973533300025986Switchgrass RhizosphereMRARIMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGL
Ga0207708_1000205083300026075Corn, Switchgrass And Miscanthus RhizosphereMSARNMSARNMSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID
Ga0207702_1237399023300026078Corn RhizosphereSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID
Ga0207641_1004959553300026088Switchgrass RhizosphereMSARNMSAQIIARLASLVAGLRATFRRSRMRLRRRVAHHGLAAID
Ga0207674_1099886813300026116Corn RhizospherePPACVRAGVGAQAMRARIMSAGIVSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID
Ga0179593_113617533300026555Vadose Zone SoilMRGRITSARIMTEHVMSAHFTARLASLMAGLRAAFRQSRMRLCRRLARHGLAAID
Ga0268264_1002783153300028381Switchgrass RhizosphereMSARIMSARNMSAQIIARLASLVAGLRATFRQSRMRLRRRVAHHGLAAID
Ga0307311_1015547123300028716SoilMSAQIVNARIMSGHIVVLLVSLAAGLRAAFGRSRMRLCRRLAHHGLAAID
Ga0307297_1038273523300028754SoilMSSRNMSAGILSAHIIARLASLVAGVRAAFRQSRTRL
Ga0307306_1007128823300028782SoilMNTHVMSARSMSAHVVVRLVSLAAGLRATFRRSRMRLCRRAARHGLAAID
Ga0307310_1009026723300028824SoilMTSRNMKAHTMRAYIARAHIMSARSMSAHVVVRLVSLVAGLRAAFGQSRMRLCRRLARHGLAAID
Ga0307304_1005433233300028885SoilMSARIVARLASLAAGLRATFQQSRMRLCRRVARHGLAAID
Ga0307498_1000096723300031170SoilMSANNMSSRNVSSRNMSAGITSAHIVALLASPVARATFRQPRMRLCRRVAHHGLTAIG
Ga0307468_10174344923300031740Hardwood Forest SoilMSSGIMGSRIMSARIMSARIARGHIVARLASLAAGLRAAFGQSHMRLCRRLARHGLAAID


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.