Metagenome / Metatranscriptome Family F090572

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090572
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	68 residues
Representative Sequence	MKRHTVILPFLLPRLTDKAAAQLVELLHALIAGIEHHYADQVHRYHKRQQEIRSDRQPPASRLTDTPF
Number of Associated Samples	78
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.81 %
% of genes near scaffold ends (potentially truncated)	16.67 %
% of genes from short scaffolds (< 2000 bps)	69.44 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (95.370 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (29.630 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (36.111 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84. 1JGI1357J11328_100358783 2JGI1357J11328_100960812 3C687J26621_100728622 4Ga0031654_100172053 5Ga0055461_102076091 6Ga0062383_100484182 7Ga0062380_100437503 8Ga0068993_101231302 9Ga0079490_1008653 10Ga0074476_15503112 11Ga0074472_107088422 12Ga0074472_109380812 13Ga0074470_100025931 14Ga0066789_101208772 15Ga0079037_1017454053 16Ga0105107_101781631 17Ga0114966_106698261 18Ga0129287_100759193 19Ga0129287_103808702 20Ga0137447_10825681 21Ga0153916_105198092 22Ga0180078_10588182 23Ga0180084_10343293 24Ga0180104_10454892 25Ga0132258_103452095 26Ga0187855_104939222 27Ga0190272_106067762 28Ga0193751_10191925 29Ga0206227_10127993 30Ga0206225_10004475 31Ga0206225_10005505 32Ga0206225_10006165 33Ga0206225_10759762 34Ga0206225_10770961 35Ga0206225_10936972 36Ga0194056_100264301 37Ga0210339_13976962 38Ga0194060_100176084 39Ga0194060_100439721 40Ga0194060_100488884 41Ga0194060_100532422 42Ga0210334_101964592 43Ga0224510_102129712 44Ga0233392_10382831 45Ga0209317_10198083 46Ga0209109_101662871 47Ga0209521_100822134 48Ga0209642_101661062 49Ga0209343_102908701 50Ga0209343_107027381 51Ga0209343_107919092 52Ga0209321_101304152 53Ga0209431_101681203 54Ga0209519_104235892 55Ga0209641_106627992 56Ga0209640_100462922 57Ga0209341_104203952 58Ga0210098_10023955 59Ga0210073_11396761 60Ga0209890_100850442 61Ga0209682_100751222 62Ga0209464_100831812 63Ga0209726_100709073 64Ga0209726_101120892 65Ga0209706_104361561 66Ga0209797_101482671 67Ga0209683_105375251 68Ga0209253_101247482 69Ga0265334_102214981 70Ga0307497_100543723 71Ga0307375_100158129 72Ga0307375_105292522 73Ga0307374_100738553 74Ga0307377_111300791 75Ga0315290_100293194 76Ga0315290_100659561 77Ga0315290_102258143 78Ga0315290_106997832 79Ga0315290_108780901 80Ga0315290_114030161 81Ga0315290_114107211 82Ga0315297_100933051 83Ga0315297_101356723 84Ga0214473_100772421 85Ga0214473_117605101 86Ga0326597_100875431 87Ga0315278_116890242 88Ga0315284_113775092 89Ga0315277_102754721 90Ga0315295_103904921 91Ga0315295_122303462 92Ga0315281_100902645 93Ga0315281_114460382 94Ga0315268_100485554 95Ga0315268_101598791 96Ga0315271_100278704 97Ga0315271_100280804 98Ga0315271_101748953 99Ga0315271_105916242 100Ga0315270_102308243 101Ga0315287_128806341 102Ga0315275_110517942 103Ga0315275_120959022 104Ga0335070_114420361 105Ga0334722_111173012 106Ga0316622_1009724021 107Ga0326726_100533344 108Ga0370484_0063479_683_889
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84. 1JGI1357J11328_100358783 2C687J26621_100728622 3Ga0031654_100172053 4Ga0055461_102076091 5Ga0062383_100484182 6Ga0062380_100437503 7Ga0079490_1008653 8Ga0074476_15503112 9Ga0074472_109380812 10Ga0079037_1017454053 11Ga0114966_106698261 12Ga0180084_10343293 13Ga0206227_10127993 14Ga0194056_100264301 15Ga0194060_100176084 16Ga0209343_107919092 17Ga0209519_104235892 18Ga0209706_104361561 19Ga0209797_101482671 20Ga0209683_105375251 21Ga0209253_101247482 22Ga0307497_100543723 23Ga0307375_105292522 24Ga0315290_100293194 25Ga0315290_114107211 26Ga0315268_100485554 27Ga0315268_101598791
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68 1Ga0066789_101208772 2JGI1357J11328_100358783 3C687J26621_100728622 4Ga0031654_100172053 5Ga0055461_102076091 6Ga0062380_100437503 7Ga0068993_101231302 8Ga0079490_1008653 9Ga0074472_109380812 10Ga0079037_1017454053 11Ga0105107_101781631 12Ga0114966_106698261 13Ga0129287_100759193 14Ga0129287_103808702 15Ga0153916_105198092 16Ga0180104_10454892 17Ga0132258_103452095 18Ga0187855_104939222 19Ga0193751_10191925 20Ga0206225_10004475 21Ga0206225_10005505 22Ga0206225_10006165 23Ga0206225_10936972 24Ga0194056_100264301 25Ga0194060_100176084 26Ga0224510_102129712 27Ga0209521_100822134 28Ga0209343_102908701 29Ga0209343_107919092 30Ga0209321_101304152 31Ga0209641_106627992 32Ga0209640_100462922 33Ga0209464_100831812 34Ga0209726_101120892 35Ga0209797_101482671 36Ga0209683_105375251 37Ga0209253_101247482 38Ga0265334_102214981 39Ga0307497_100543723 40Ga0307375_100158129 41Ga0307375_105292522 42Ga0315290_100293194 43Ga0315290_100659561 44Ga0315290_108780901 45Ga0315290_114107211 46Ga0315297_101356723 47Ga0326597_100875431 48Ga0315278_116890242 49Ga0315281_100902645 50Ga0315281_114460382 51Ga0315268_100485554 52Ga0315268_101598791 53Ga0335070_114420361 54Ga0334722_111173012 55Ga0316622_1009724021 56Ga0326726_100533344 57Ga0370484_0063479_683_889
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.67% β-sheet: 0.00% Coil/Unstructured: 58.33%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13401	AAA_22	35.19
PF01695	IstB_IS21	9.26
PF13683	rve_3	8.33
PF07929	PRiA4_ORF3	8.33
PF09299	Mu-transpos_C	5.56
PF02195	ParBc	1.85
PF00535	Glycos_transf_2	0.93
PF08483	Obsolete Pfam Family	0.93
PF13565	HTH_32	0.93
PF00665	rve	0.93

Showing 1 to 10 of 13 entries

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COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	9.26
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.93
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.93
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.93
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.93
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.37 %
Unclassified	root	N/A	4.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.37 %
Unclassified	root	N/A	4.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.37 %
Unclassified	root	N/A	4.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.30 %
Unclassified	root	N/A	4.63 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	59.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.85 %
Unclassified	root	N/A	4.63 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	57.41 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.93 %
Mariprofundales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales	2.78 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.93 %
Unclassified	root	N/A	4.63 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	34.26 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23	0.93 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %
Mariprofundaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales → Mariprofundaceae	2.78 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.93 %
Unclassified	root	N/A	4.63 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	34.26 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23	0.93 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.93 %
Herbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum	0.93 %
Mariprofundus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales → Mariprofundaceae → Mariprofundus	2.78 %
Pelomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas	0.93 %
Thauera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera	0.93 %
Unclassified	root	N/A	4.63 %

Name	Rank	Taxonomy	Distribution
Azohydromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	12.96 %
Azohydromonas lata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas lata	18.52 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23	0.93 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.93 %
Mariprofundus ferrooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales → Mariprofundaceae → Mariprofundus → Mariprofundus ferrooxydans	2.78 %
Pelomonas saccharophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas saccharophila	0.93 %
Thauera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera	0.93 %
Unclassified	root	N/A	4.63 %
unclassified Herbaspirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum	0.93 %

Name	Rank	Taxonomy	Distribution
Azohydromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	12.96 %
Azohydromonas lata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas lata	18.52 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23	0.93 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.93 %
Herbaspirillum sp. RV1423	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. RV1423	0.93 %
Mariprofundus ferrooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales → Mariprofundaceae → Mariprofundus → Mariprofundus ferrooxydans	2.78 %
Pelomonas saccharophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas saccharophila	0.93 %
Thauera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera	0.93 %
Unclassified	root	N/A	4.63 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000574\|JGI1357J11328_10035878	All Organisms → cellular organisms → Bacteria → Proteobacteria	2142	Open in IMG/M
3300000574\|JGI1357J11328_10096081	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300002104\|C687J26621_10072862	Not Available	1159	Open in IMG/M
3300003861\|Ga0031654_10017205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	2106	Open in IMG/M
3300003991\|Ga0055461_10207609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	532	Open in IMG/M
3300004778\|Ga0062383_10048418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	1662	Open in IMG/M
3300004779\|Ga0062380_10043750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	1483	Open in IMG/M
3300005183\|Ga0068993_10123130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	852	Open in IMG/M
3300005794\|Ga0079490_100865	All Organisms → cellular organisms → Bacteria → Proteobacteria	1895	Open in IMG/M
3300005825\|Ga0074476_1550311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	2068	Open in IMG/M

Showing 1 to 10 of 108 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	67.59%
Plants	Host-Associated → Plants	1.85%
Terrestrial	Environmental → Terrestrial	30.56%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	7.41%
Freshwater	Environmental → Aquatic → Freshwater	51.85%
Marine	Environmental → Aquatic → Marine	6.48%
Peat	Environmental → Terrestrial → Peat	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%
Sediment	Environmental → Aquatic → Sediment	7.41%
Soil	Environmental → Terrestrial → Soil	22.22%
Unclassified	Environmental → Aquatic → Unclassified	1.85%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	3.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	8.33%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.85%
Lake	Environmental → Aquatic → Freshwater → Lake	30.56%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.85%
Loam	Environmental → Terrestrial → Soil → Loam	4.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.78%
Sediment	Environmental → Aquatic → Marine → Sediment	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	9.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.41%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	7.41%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.63%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.70%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	3.70%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	25.00%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.41%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	7.41%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	4.63%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	4.63%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.85%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	4.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	1.85%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	7.41%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.85%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.93%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.93%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	3.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	3.70%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.70%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	25.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.93%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.93%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.70%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	4.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.85%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	5.56%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300002104	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300003991	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005794	Subglacial sediment microbial community from Lake Whillans, Antarctica - at 0-2 cm depth	Environmental	Open in IMG/M
3300005825	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.184_BBB	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M

Showing 1 to 10 of 78 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1357J11328_100358783	3300000574	Groundwater	MKRYTVILPFVLPRLTDKAAAQFIELLHELIGGIEHHYAAQVHRYHKHQQEIRQNRLWGRSPLSTPTDPPF*
JGI1357J11328_100960812	3300000574	Groundwater	MKRHTVILPFVLPRLTDKAAAQFLELLHEIIAGIEHHYAEQVHLYRKRQQEIRQDRLYRRSPLSTPTDPAF*
C687J26621_100728622	3300002104	Groundwater	MKRHTVIMPFNLPRLTDKAAAQFIELLQQLFADIEHHYAEQAHRYRKHQQEIQYHRQAPSSRPTDPPF*
Ga0031654_100172053	3300003861	Freshwater Lake Sediment	MKRXTVVLPFLLPRLSDHAAAQLVELLHALIAAIEHHYAEQAHRYHKRQCNRRLDRQSPPADFSDPPF*
Ga0055461_102076091	3300003991	Natural And Restored Wetlands	MKRHTVILPFLLPRLTDKAAAQLVDLLNALLTGIEHHYAEQVHRYHHRRRQIRQDRRSPPSNLTDPPF*
Ga0062383_100484182	3300004778	Wetland Sediment	MKRHTIIPPLLLPRLSDPAAARLVEWLRALLAGIEHHYAGQVQRYQKRQQQIRQDRIYRRSPLSTTDDPPF*
Ga0062380_100437503	3300004779	Wetland Sediment	MKRHTVILPFLLPRLSDKAAAQFLGLLHEIIAGIEHHYADQVHRYHKRQQEIRYDQPPPPSRLTDTPF*
Ga0068993_101231302	3300005183	Natural And Restored Wetlands	MKRHTVILPFLLPHLTDKAAAQLVALLHELLVGIEHHYAEQVHRYQKRRRTLRLDRQPPTSNFSDPPF*
Ga0079490_1008653	3300005794	Sediment	MKRQTVILPFNLPRLTDKAAAQLLDLLHELIEGIEHHYAAQIHRYRKRQREMHQHRQSPPSTLTDSPF*
Ga0074476_15503112	3300005825	Sediment (Intertidal)	VLPRLTDKAAAQLVELLYEISEGIEHYYAAQIHRYHNHQREIRHDRQSPPSQLTDPPF*
Ga0074472_107088422	3300005833	Sediment (Intertidal)	MKRHTVILPFLLPRLSDKAAAQLLGLLHEIIAGIEHHYADQVHRYHKRQQEIRYDQPPPPSRLTDTPF*
Ga0074472_109380812	3300005833	Sediment (Intertidal)	MKRHTVILPLVLPRLTDQTAAQFIELLHELIGGIEHHYAAQVHRYHKRQRNIQIDRKPQPSIFSDPPF*
Ga0074470_100025931	3300005836	Sediment (Intertidal)	MKRHTVILPFLLPHLTDKAAAQLVALLHELLVGIEHHYAEQVHRYQKRRRNLRLDRQPPTSNFSDPPF*
Ga0066789_101208772	3300005994	Soil	MKRHTVILPFLLPRLTDKAAAQLVELLHALIAGIEHHYADQVHRYHKRQQEIRSDRQPPASRLTDTPF*
Ga0079037_1017454053	3300006224	Freshwater Wetlands	MKPHTVILPFLLPRLSDHAAAQLVELLHQLLVGIEHHYAEQVHRYHKRQRNIRLDRQPPPSDL
Ga0105107_101781631	3300009087	Freshwater Sediment	MKRHTIILPFLLPRLTDQAAAQLVELLHAILAGIEHHYADQVHRYHKRQQEIRQDRLYRRSPLSTPTDPPF*
Ga0114966_106698261	3300009161	Freshwater Lake	MKRYTVILPLLLPRLSDPAAVRLIELLRAILAAIEHHYARQVQRYHKRQQQIRQDRLYRHHPPSTSNDSLF*
Ga0129287_100759193	3300009538	Beach Aquifer Porewater	MKRHTVILPFLVPRLTDKAASQFVELLHVILAGIEHHYAAPVHRYHKRQREIRQDRLYRRAPLSTPTDPPF*
Ga0129287_103808702	3300009538	Beach Aquifer Porewater	MKRHTVILPFVLPRLTDKAAAQLVELLHELIEGIEHHYAQQVHRYHHRQREIRYDRTAPPSTLTDNPF*
Ga0137447_10825681	3300012226	Soil	MKRHTIIPPLLLPRLSDPAAARLVEWLRALLAGIEHHYAGQVQRYQKRQQQIRQDR
Ga0153916_105198092	3300012964	Freshwater Wetlands	MKRHTVVLPLRLPRLTDKTAAQLVELLHELIEGIEHHYAQQVHRYHQRQREIRYDRQSPSSTLTDVPF*
Ga0180078_10588182	3300014865	Soil	MKRHTVILPFVLPRLTDKAAAQLLELLHLILAGIEHHYAAQVHRYHQRQREIRQDRPYRQSPLSTPTDHPF*
Ga0180084_10343293	3300014874	Soil	MKHHTVILPFVLPRLTDKAAAPLVELLYEIIEGIEHYYAAQIHRYHNRQREIRHARQSPPSQ
Ga0180104_10454892	3300014884	Soil	MKRHTVILPFVLPRLTDKAAAQLLELLHLILAGIEHHYAAQVHRYHQRQREIRQDRPYRQSPLSTPTDPPF*
Ga0132258_103452095	3300015371	Arabidopsis Rhizosphere	MKRHTVILPFLLPRLSDKAAAQLIELLNALLAGVEHHYAEQAHRYHQRQREIRQDRQSPPSTLIDPPF*
Ga0187855_104939222	3300018038	Peatland	MKHHTVILPFLLPRLSDKAASQFIELLHQLIAGIEHHYAVQVHRHRKRQRETRQNRLWERSPLSTPTDPPF
Ga0190272_106067762	3300018429	Soil	MKRHTVILPFLLPRLNDKAAAQLVELPHALIAGIEHHYADQVHRYHKRQRQIRYDRQPPTSRLTDTPF
Ga0193751_10191925	3300019888	Soil	MKRHTVILPLLLPRLTDHAAAQLVELLHELIAAIEHHYAEQVHRYHKRQRNIRLDRQPPPSTFSDPPF
Ga0206227_10127993	3300021063	Deep Subsurface Sediment	MKRHTVLTFVLPPLTDQAAAQFIELLHELIGGIEHHYAEQVHQHRKRQQEIRYHRQ
Ga0206225_10004475	3300021064	Deep Subsurface Sediment	MKRHTVILPFVLPRLTDKTAAQLIELLHELIGGIEHHYAEQVHRYRKHQQEIQYHQQSPSSQRSDPPF
Ga0206225_10005505	3300021064	Deep Subsurface Sediment	MKRHTVILPFNFPRLTDKAAAQFIELLHQLFANVEHHYAEQAHRYRKHQQQIQYRQQSPHSRPTDPPF
Ga0206225_10006165	3300021064	Deep Subsurface Sediment	MKRHTVIIPFNLPRLTDKAAAQFIELLHQLFANIEHHYAEQAHRYRKHQHKIQYRRQSPSSRPTDPPF
Ga0206225_10759762	3300021064	Deep Subsurface Sediment	MKRHTVIMPFNLPRLTDKAAAQFIALLHQLFADIEHHYAEQAHRYRKHQQEIQYRRQSPSSRPTDPPF
Ga0206225_10770961	3300021064	Deep Subsurface Sediment	MKRHTVILPFNLPRLTDKAAAQFIELLHQLFANIEHHYAEQAHRYRKHQQEIQYRRQSPSSRPTDPPF
Ga0206225_10936972	3300021064	Deep Subsurface Sediment	MKRRTVLTFVLPPLTDKAAAQFIELLHELIDGIEHHYAEQVHQHRKHQQEIRYRRQSPSSRLTDPPF
Ga0194056_100264301	3300021070	Anoxic Zone Freshwater	MKPHTVILPFLLPRLSDPAAAQLVALLQALLAGIEHHYADQVHRHHKRQANRRYDRATARDPPSDPLF
Ga0210339_13976962	3300021332	Estuarine	MKRHTVILPFVLPRLTDKAAAQLVELLYEISEGIEHYYAAQIHRYHNHQREIRHDRQSPPSQLTDP
Ga0194060_100176084	3300021602	Anoxic Zone Freshwater	VKRRTVIIPFNFPCLTDKAAAQVIEVLHELIANIEHHYAEQAHQYRKHQQEIQCRRKSPASRLTDPPF
Ga0194060_100439721	3300021602	Anoxic Zone Freshwater	MKPHTVILPFLLPRLSDPAAAQLVALLQALFTAIEHHYADQVHRHHKRQANRRYDRATARDPPSDPPF
Ga0194060_100488884	3300021602	Anoxic Zone Freshwater	FLLPRLTDKAAAQFIELLHELIGGIEHHYATQVHRYHKRQQETRQNRLWERSPLSTPTDPPF
Ga0194060_100532422	3300021602	Anoxic Zone Freshwater	MKRHTVILPFLLPRLTDKAAAQFIELLHELIGGIEHHYAAQVHRYRKRQQETRQNRLWGRSPLSTPTDPPF
Ga0210334_101964592	3300021859	Estuarine	VLPRLTDKAAAQLVELLYEISEGIEHYYAAQIHRYHNHQREIRHDRQSPPSQLTDPPF
Ga0224510_102129712	3300022309	Sediment	AMRRHTVILPLLLPRLSDPAAARLVELLRAILAGIEHHYAGQVQRYHKRQQQIRQDRLYRRSPPSTPSDPPF
Ga0233392_10382831	3300024241	Deep Subsurface Sediment	MKRRTVLTFVLPPLTDQAAAQFIELLHELIGGIEHHYAEQVHQHRKRQQEIRYRRQSPSSRLTDPPF
Ga0209317_10198083	3300025013	Soil	MKRHTVIMPFNLPRLTDKAAAQFIELLHQLFANIEHHYAEQAHRYRKHQHEIQYRRQSPSSRPTDPPF
Ga0209109_101662871	3300025160	Soil	MKRHTVILPLRLPRLTDKTAAQLVELLHELIEGIEHHYAQQVHRYHNRQREIRQDRRYRQSPLSTPTDPP
Ga0209521_100822134	3300025164	Soil	MKRHTVILPFVLPRLTDKTAAQFLELLHELIGGIEHHYAEQLHRYRKHQQAIRYHRQSPSARLTDPPF
Ga0209642_101661062	3300025167	Soil	MKRHTVILPLRLPRLTDKTAAQLVELLHELIEGIEHHYAQQVHRYHNRQREIRQDRRYRQSPLSTPTDPPF
Ga0209343_102908701	3300025311	Groundwater	MKRHTVILPFVLPRLTDKAAAQLLELLHELIGGIQHHYAEQVHRYRKRQQEIRYHRQSPS
Ga0209343_107027381	3300025311	Groundwater	MKRHTVIIPFNLPRLTDKAAAQFIELLHQLFTNIEHHYAEQAHRYRKHQQEIQYRRQSPSSRPTDPPF
Ga0209343_107919092	3300025311	Groundwater	MKRHTVILPFVLPRLTDKAASQFIELLRAILDATEHHYAAQVHRYHQRQREIRYDRTAPPSTLTDNPF
Ga0209321_101304152	3300025312	Soil	MKRHTVILPFVLPRLTDKTAAQLVELLHELIEGIEHHYAQQVHRYHNRQREIRQDRRYRQSPLSTPTDPPF
Ga0209431_101681203	3300025313	Soil	MKRHTVVLPFVLPRLTDKTAAQLVELLHELIEGIEHHYAQQVRRYHQRQREIRYDRQSPSSTLTDVPF
Ga0209519_104235892	3300025318	Soil	MKRHTVILPLRLPRLTDKTAAQLVELLHELIEGIEHHYAQQVHRYHNRQREIRHDRQSPPSQLTDPPFGTTRYARLH
Ga0209641_106627992	3300025322	Soil	MKRHTVIIPLNFPRLTDQAAAQFIELLHQLFANVEHHYAEQAHRYRKHQQEIQYRRKSPSSRLTHPPF
Ga0209640_100462922	3300025324	Soil	MKRHTVILPFVLPRLTDKAASQLVELLYKIIEGIEHYYAAQIQRYHNRQREIRHDRQSPPSQLTDPPFGTTRYARLH
Ga0209341_104203952	3300025325	Soil	MKRHTVIMPFNLPRLTDKAAAQFIELLQQLFADIEHHYAEQAHRYRKHQQEIQYRRQSPSSRPTDPPF
Ga0210098_10023955	3300025550	Natural And Restored Wetlands	MKRHTVILPFLLPRLTDKAAAQLVDLLNALLTGIEHHYAEQVHRYHHRRRQIRQDRRSPPSNLTDPPF
Ga0210073_11396761	3300025569	Natural And Restored Wetlands	MKRHTVILPFLLPHLTDKAAAQLVALLHELLVGIEHHYAEQVHRYQKRRRNLRLDRQPPTSNFS
Ga0209890_100850442	3300026291	Soil	MKRHTVILPFLLPRLTDKAAAQLVELLHALIAGIEHHYADQVHRYHKRQQEIRSDRQPPASRLTDTPF
Ga0209682_100751222	3300027716	Wetland Sediment	MKRHTVILPFLLPRLSDKAAAQFLGLLHEIIAGIEHHYADQVHRYHKRQQEIRYDQPPPPSRLTDTPF
Ga0209464_100831812	3300027778	Wetland Sediment	MKRHTIIPPLLLPRLSDPAAARLVEWLRALLAGIEHHYAGQVQRYQKRQQQIRQDRIYRRSPLSTTDDPPF
Ga0209726_100709073	3300027815	Groundwater	MKRYTVILPFVLPRLTDKAAAQFIELLHELIGGIEHHYAAQVHRYHKHQQEIRQNRLWGRSPLSTPTDPPF
Ga0209726_101120892	3300027815	Groundwater	MKRHTVILPFVLPRLTDKAAAQFLELLHEIIAGIEHHYAEQVHLYRKRQQEIRQDRLYRRSPLSTPTDPAF
Ga0209706_104361561	3300027818	Freshwater Sediment	MKRHTIILPFLLPRLTDQAAAQLVELLHAILAGIEHHYADQVHRYHKRQQEIRQDRLYRRSPLS
Ga0209797_101482671	3300027831	Wetland Sediment	MKRHTVILPLLLPRLTDHAAAYLVALLRALLAGIEHHYADQVHRYHKHQAERSLRRSAPPANRDDPPF
Ga0209683_105375251	3300027840	Wetland Sediment	TVILPLLLPRLTDKAAAQFIELLHLLVAAVEHHYAAQIHRHHKSRREIRQDRPYRRHPISTPTEPPF
Ga0209253_101247482	3300027900	Freshwater Lake Sediment	MKHQSHPVIVRLSLPCLTDKAAAQFVELLYEIIEGIEHHYAQQVHRYHQRQREIRYDRQSPSSTLTDVPF
Ga0265334_102214981	3300028573	Rhizosphere	MKRHTVILPFLLPRLTDQAAAQLVELLHALLAGIEHHYAEQVHRYHKRQCNIRLDRQPPTSDLSDPPF
Ga0307497_100543723	3300031226	Soil	MKRQTVILPLSLPRLTDKSAAQFIELLHEFVMTIEHHYSKQAHRHRKHQQEIQYRRKSPPSPFTDPLF
Ga0307375_100158129	3300031669	Soil	MKRHTVILPFLLPHLTDKAAAQFIELLHELIGGIEHHYAEQVHRYHKRQRETRQNRLWGRSPLSTPTDPPF
Ga0307375_105292522	3300031669	Soil	MKRHTVILPFALPHLTDKAAAQFIDLLHELIGGIEHHYAAQAHRYHKRQKERLQEIQYQHSLSSQFNDPPF
Ga0307374_100738553	3300031670	Soil	MKRHTVIVPFNLPHLTDKAAAQFIELLHQLFADIEHHYAEQAHRYRKHQQEIHYRRQSPSSRPTDPPF
Ga0307377_111300791	3300031673	Soil	MKRHTIILPFALPHLTDKAAAQFIDLLHELIGGIEHHYAVQIHRYRKRQRETRQNRLWGRSPLSTPTDPPF
Ga0315290_100293194	3300031834	Sediment	MKYHNVILPFMLPRLSDKAAAQLVALLHELITSIEHHYAEQVHRYHKRQQEIRQHRRDRAYQSPTSTLADPPF
Ga0315290_100659561	3300031834	Sediment	MKRHTVIRPFLLPRLSDHAAAQLVELLHQLVAGIEHHYAEQVHRYHKRQRNLHLDRQPPPSSFSDPPF
Ga0315290_102258143	3300031834	Sediment	MKRHTVILPFLLPRLTDKAAAQLVELLHALLAGIAHHYAEQVHRYHKRQRNIRLDRQPPTSDRSDTPF
Ga0315290_106997832	3300031834	Sediment	MKRHTVILPFLLPRLTDHAAAQLVELLHQLLAGIEHHYAEQVHRYHKRQRNIHLDRQPPPSRFSDPPF
Ga0315290_108780901	3300031834	Sediment	MKRHTVILPFLLPRLTDKAATQLVELLHQLIAGIEHHYAEQVHRYHKRQRNIHFDQQPPPSLFSDPPF
Ga0315290_114030161	3300031834	Sediment	MKRHTVILPFLLPHLTDHAAAQLVELLHQLVAGIEHHYAEQVHRYHKRQRNLHLDRQPPPSIFNDPPF
Ga0315290_114107211	3300031834	Sediment	MKRHSVLLPFVLPRLTDKAAAQLVEVLHELLASIEHHYAEQAFRYNKRQLEIPLQRQSPPSEQTDTPF
Ga0315297_100933051	3300031873	Sediment	MNRHTVILPFLLPRLSDHAAAQLVELLHQLVAGIEHHYAEQVHRYHKRQRNLHLDRQPPPSIFSDPPF
Ga0315297_101356723	3300031873	Sediment	MKRHTVILPFLLPRLSDHAAAQFVELLHQLLAGIEHHYAEQVHRYHQRQRNLRLDRQPPPSIFDDPPF
Ga0214473_100772421	3300031949	Soil	MKRHTVIMPFNVPRLTDKAAAQFIELLHQLFANIEHHYAEQAHRYRKHQQEIQYRRQSPASRPTDPPF
Ga0214473_117605101	3300031949	Soil	MKHHTVILPFVLPRLTDKAASQFIELLRAILDATEHHYAAQVHRYHQRQREIRYDRTAPPSTLTDNPF
Ga0326597_100875431	3300031965	Soil	MKRHSVILPFNLPHLTDKAAAQFIELLHELFANIEHHYAEQAHQYRKHQQEIRYRRKSPPAHSTDPLF
Ga0315278_116890242	3300031997	Sediment	MKRHSVLLPFVLPRLTDKAAAQLVELLHELLAGIEHHYAAQAHRYHKRQPEIRQHPPSASPTRTDSPF
Ga0315284_113775092	3300032053	Sediment	MKRHTVILPFLLPRLTDKAATQLVELLHELIAGIEHYYAEQVHRYHKRQRNIHFDQQPP
Ga0315277_102754721	3300032118	Sediment	MKRHTVILPFLLPRLSDHAAAQFVELLHQLLAGIEHHYAEQVHRYHKRQRNLHLDRQPPPSIFNDPPF
Ga0315295_103904921	3300032156	Sediment	MKRHSVLLPFVLPRLTDKAAAQLLEVLHELLAGIEHHYAEQAFRYNKRQLEIPLQRQSPPSEQTDTPF
Ga0315295_122303462	3300032156	Sediment	MKHHTVILPFLLPRLTDHAAAQLVELLHQLVAGIEHHYAEQVHRYHKRQRNLHLDRQPPPSIFSDPPF
Ga0315281_100902645	3300032163	Sediment	MKRHTVVLPFVLPRLTDKAAAQLVELLYEIIEGIEHYYAAQIHRYHNHQREIRQDRQSPPSQPTDPPF
Ga0315281_114460382	3300032163	Sediment	MKRHTVILPFVLPRLTDKAAAQLVELLYEIIEGIEHHYAQQVHRYHQHQREIRYDRQSPTSQLTDPPF
Ga0315268_100485554	3300032173	Sediment	MKRHTVILPFVLPRLTDKAAAQLLDLLHAILAGIEHHYATPLHRYHQHQREIRQARRCRRSPLATPTDPPF
Ga0315268_101598791	3300032173	Sediment	MKHQSHPVIVRLSLPCLTDKAAVQFVDLLHQLIERIEFHYSIQIHRYNERQQNIFYARQSRVSKPTDPPF
Ga0315271_100278704	3300032256	Sediment	MKRHTVILPFLLPRLTDHAAAQLVELLHQLLAGIEHHYAEQVHRYHKRQRNIHLDRQPPPSIFSDPPF
Ga0315271_100280804	3300032256	Sediment	MKRHTVILPFLLPRLSDHAAAQLVELLHQLVAGIEHHYAEQVHRYHKRQRNLHLDRQPPPSIFSDPPF
Ga0315271_101748953	3300032256	Sediment	MKRHTVILPFLLPRLTDKAATQLVELLHELIAGIEHHYAEQVHRYHKRQRNIHFDQQPPPSLFSDPPF
Ga0315271_105916242	3300032256	Sediment	MKRHTVILPFLLPRLSDHAAAQFVELLHQLLAGIEHHYAEQAHRYHKRQRNIHLDRQPPPSIFSDPPF
Ga0315270_102308243	3300032275	Sediment	MKRHTVILPFLLPRLSDHAAAQLVELLHQLVAGIEHHYAEQVHRYHKRQRNLHLDRQPPPSIFSD
Ga0315287_128806341	3300032397	Sediment	MKRHTVILPFLLPRLSDHAAAQLVELLHQLLAGIEHHYAEQVHRYHKRQRNIHLDR
Ga0315275_110517942	3300032401	Sediment	MKRHTVILPFLLPRLTDKAATQLVELLHELIAGIEHYYAEQVHRYHKRQRNIHFDQQPPPSLFSDPPF
Ga0315275_120959022	3300032401	Sediment	ILPFLLPRLTDHAAAQLVELLHQLLAGIEHHYAEQVHRYHKRQRNIHLDRQPPPSRFSDPPF
Ga0335070_114420361	3300032829	Soil	MKRHTVILPFVLPRLTDKAAAQFVEMLHELIAGIEHHYADQVHRYHKRQREIRYDRQPPTSRLTDTPF
Ga0334722_111173012	3300033233	Sediment	MKRHTVILPFVLPRLTDKTAAQFIDLLHELIGGIEHHYAAQVHRYRKRQQQIQQNRPWGRSALPSPIDPPF
Ga0316622_1009724021	3300033416	Soil	MKRHTVILPFLLPRLTDKAAAQLLELLHALLAGIEHHYAEQVHHYHQRRRQIRQDRRSPPSNLSDPPF
Ga0326726_100533344	3300033433	Peat Soil	MKRHSVILPFDLPRLTDKAAAQLIELLHELFAGIEHHYAEQAFRYNKRQLEIRLQRQSPPSDQTNTPF
Ga0370484_0063479_683_889	3300034125	Untreated Peat Soil	MKRHTVILPFLLPRLTDKAAAQFIELLHELIGGIEHHYATQVHRYHKRQQEIRYHRQSQFPRLGDPPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters