Metagenome / Metatranscriptome Family F090485

Overview

Basic Information

• Family ID: F090485
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 108
• Average Sequence Length: 45 residues
• Representative Sequence: MSEVSDLEIGKLIQKVDSLEVMVREQNDRLDKLDQQLERTRG
• Number of Associated Samples: 64
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 97.22 %
• % of genes near scaffold ends (potentially truncated): 98.15 %
• % of genes from short scaffolds (< 2000 bps): 82.41 %
• Associated GOLD sequencing projects: 52
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (71.296 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (46.296 % of family members)
• Environment Ontology (ENVO): Unclassified (97.222 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (81.481 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 83.33%
  β-sheet: 0.00%
  Coil/Unstructured: 16.67%

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
All Organisms	root	All Organisms	28.70 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
cellular organisms	root	All Organisms → cellular organisms	14.81 %
Viruses	superkingdom	All Organisms → Viruses	13.89 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.89 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.48 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.56 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.63 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.89 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.56 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.63 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.78 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → environmental samples	0.93 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.89 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	5.56 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	4.63 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.78 %
uncultured Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → environmental samples → uncultured Gammaproteobacteria bacterium	0.93 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.89 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	5.56 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	4.63 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.78 %
uncultured Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → environmental samples → uncultured Gammaproteobacteria bacterium	0.93 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.89 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	5.56 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	4.63 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.78 %
uncultured Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → environmental samples → uncultured Gammaproteobacteria bacterium	0.93 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.89 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	5.56 %
Flavobacteriales bacterium TMED123	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED123	4.63 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.78 %
uncultured Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → environmental samples → uncultured Gammaproteobacteria bacterium	0.93 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001727|JGI24529J20061_106089	Not Available	602
3300001735|JGI24520J20079_1009994	Not Available	546
3300001743|JGI24515J20084_1019890	Not Available	602
3300002231|KVRMV2_101263960	All Organisms → Viruses → Predicted Viral	1308
3300002511|JGI25131J35506_1037508	Not Available	669
3300002514|JGI25133J35611_10163762	Not Available	603
3300002760|JGI25136J39404_1000859	All Organisms → Viruses → Predicted Viral	4729
3300002760|JGI25136J39404_1030700	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED123	984
3300002760|JGI25136J39404_1091895	Not Available	570
3300002760|JGI25136J39404_1112853	Not Available	514
3300005408|Ga0066848_10048301	Not Available	1179
3300005604|Ga0066852_10319196	Not Available	520
3300006090|Ga0082015_1066795	Not Available	564
3300006341|Ga0068493_10793772	Not Available	581
3300006736|Ga0098033_1094368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → environmental samples → uncultured Gammaproteobacteria bacterium	853
3300006988|Ga0098064_139784	Not Available	602
3300007756|Ga0105664_1063319	Not Available	514
3300007758|Ga0105668_1082695	Not Available	1380
3300008050|Ga0098052_1303454	Not Available	603
3300008216|Ga0114898_1026645	All Organisms → Viruses → Predicted Viral	1964
3300008217|Ga0114899_1241712	Not Available	559
3300008218|Ga0114904_1005359	All Organisms → Viruses → Predicted Viral	4960
3300008218|Ga0114904_1077906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	829
3300008219|Ga0114905_1106573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	967
3300008219|Ga0114905_1113575	Not Available	928
3300008220|Ga0114910_1003484	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	6712
3300008220|Ga0114910_1160525	Not Available	635
3300009412|Ga0114903_1064364	Not Available	839
3300009412|Ga0114903_1075620	Not Available	761
3300009412|Ga0114903_1126750	Not Available	560
3300009412|Ga0114903_1128734	Not Available	555
3300009412|Ga0114903_1143288	Not Available	522
3300009413|Ga0114902_1049601	Not Available	1223
3300009414|Ga0114909_1012457	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED123	2988
3300009418|Ga0114908_1024429	All Organisms → Viruses → Predicted Viral	2333
3300009418|Ga0114908_1211060	Not Available	600
3300009604|Ga0114901_1088613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	993
3300009604|Ga0114901_1119108	Not Available	815
3300010155|Ga0098047_10197375	Not Available	772
3300010155|Ga0098047_10384108	Not Available	526
3300011013|Ga0114934_10225826	Not Available	860
3300017775|Ga0181432_1242194	Not Available	568
3300021342|Ga0206691_1042381	Not Available	576
3300022227|Ga0187827_10828978	Not Available	508
(restricted) 3300024518|Ga0255048_10050571	All Organisms → Viruses → Predicted Viral	2084
(restricted) 3300024518|Ga0255048_10175657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1048
(restricted) 3300024520|Ga0255047_10005857	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	7232
(restricted) 3300024520|Ga0255047_10073016	All Organisms → Viruses → Predicted Viral	1770
(restricted) 3300024520|Ga0255047_10504199	Not Available	608
3300025046|Ga0207902_1009721	All Organisms → Viruses → Predicted Viral	1027
3300025046|Ga0207902_1036817	Not Available	606
3300025049|Ga0207898_1019326	Not Available	862
3300025049|Ga0207898_1050676	Not Available	508
3300025050|Ga0207892_1020516	Not Available	736
3300025052|Ga0207906_1001608	All Organisms → Viruses → Predicted Viral	4402
3300025052|Ga0207906_1003495	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED123	2430
3300025052|Ga0207906_1006876	All Organisms → Viruses → Predicted Viral	1633
3300025052|Ga0207906_1039436	Not Available	643
3300025069|Ga0207887_1014095	Not Available	1246
3300025069|Ga0207887_1025301	Not Available	945
3300025069|Ga0207887_1031023	Not Available	859
3300025069|Ga0207887_1038972	Not Available	771
3300025069|Ga0207887_1047916	Not Available	696
3300025072|Ga0208920_1048226	Not Available	854
3300025082|Ga0208156_1012439	All Organisms → Viruses → Predicted Viral	2030
3300025125|Ga0209644_1010136	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1955
3300025125|Ga0209644_1130749	Not Available	598
3300025125|Ga0209644_1180942	Not Available	502
3300025128|Ga0208919_1206445	Not Available	587
3300025131|Ga0209128_1010376	All Organisms → Viruses → Predicted Viral	4670
3300025131|Ga0209128_1138165	Not Available	742
3300025141|Ga0209756_1015245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	4727
3300025251|Ga0208182_1043256	Not Available	965
3300025251|Ga0208182_1045903	Not Available	925
3300025270|Ga0208813_1014025	Not Available	2173
3300025270|Ga0208813_1092748	Not Available	611
3300025277|Ga0208180_1076148	Not Available	793
3300025277|Ga0208180_1139263	Not Available	500
3300025286|Ga0208315_1015827	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED123	2473
3300025293|Ga0208934_1066659	Not Available	637
3300025305|Ga0208684_1009777	All Organisms → Viruses → Predicted Viral	3438
3300025305|Ga0208684_1013650	Not Available	2742
3300025305|Ga0208684_1074414	Not Available	885
3300025305|Ga0208684_1135652	Not Available	587
3300025305|Ga0208684_1148244	Not Available	551
3300025873|Ga0209757_10075674	Not Available	1012
3300025873|Ga0209757_10162722	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED123	701
3300025873|Ga0209757_10179287	Not Available	668
3300025873|Ga0209757_10182083	Not Available	663
3300025873|Ga0209757_10244681	Not Available	569
3300025873|Ga0209757_10255846	Not Available	556
3300025873|Ga0209757_10308413	Not Available	504
3300026191|Ga0208523_1057323	Not Available	508
3300026268|Ga0208641_1175872	Not Available	569
(restricted) 3300027881|Ga0255055_10600162	Not Available	589
3300028039|Ga0256380_1022340	Not Available	1028
3300028039|Ga0256380_1040423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	728
3300031801|Ga0310121_10039072	All Organisms → Viruses → Predicted Viral	3263
3300031801|Ga0310121_10461679	Not Available	710
3300031801|Ga0310121_10706324	Not Available	534
3300031804|Ga0310124_10608597	Not Available	629
3300031886|Ga0315318_10565070	Not Available	646
3300032146|Ga0315303_1128459	Not Available	522
3300032278|Ga0310345_10046667	All Organisms → Viruses → Predicted Viral	3676
3300032360|Ga0315334_11844774	Not Available	513
3300032820|Ga0310342_100105077	All Organisms → cellular organisms → Bacteria	2628
3300034629|Ga0326756_049067	Not Available	524
3300034656|Ga0326748_036374	Not Available	683

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	86.11%
Inlet	Environmental → Aquatic → Marine → Inlet	5.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.85%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.85%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.93%
Strait	Environmental → Aquatic → Marine → Strait	0.93%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.93%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	83.33%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	5.56%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	1.85%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.85%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.93%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.93%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	46.30%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	29.63%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	5.56%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.70%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.78%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	1.85%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.85%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	1.85%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.85%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.93%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.93%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.93%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.93%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300001727	Marine viral communities from the Pacific Ocean - LP-55	Environmental
3300001735	Marine viral communities from the Pacific Ocean - LP-45	Environmental
3300001743	Marine viral communities from the Pacific Ocean - LP-38	Environmental
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental
3300006988	Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl	Environmental
3300007756	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assembly	Environmental
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental
3300021342	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015 (Metagenome Metatranscriptome)	Environmental
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental
3300024518 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2	Environmental
3300024520 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1	Environmental
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental
3300025049	Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)	Environmental
3300025050	Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)	Environmental
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental
3300025270	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)	Environmental
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental
3300025293	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)	Environmental
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental
3300026191	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF82A (SPAdes)	Environmental
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental
3300027881 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27	Environmental
3300028039	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300m	Environmental
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental
3300032146	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_Tmax_316 (Metagenome Metatranscriptome)	Environmental
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental
3300034629	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600	Environmental
3300034656	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24529J20061_1060893	3300001727	Marine	MSEVSDLEIGKLIQKVDSLQVMVREQNDRLDRLDQQLERTR
JGI24520J20079_10099942	3300001735	Marine	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDRLDKQLERTRGIGIGVVLG*
JGI24515J20084_10198903	3300001743	Marine	MSDVSDLEIGKLIQKVDSLEVMVREQNDRLDKLDQQLERTRGIGIGVVLATV
KVRMV2_1012639601	3300002231	Marine Sediment	MSEVSDVELGKLIQQISTLEVMVKEQNIRLDKLDQQLERTRGIGI
JGI25131J35506_10375083	3300002511	Marine	MSEVTDLEIGKLIQKVDSLEVMVREQNDRLDRLDHQLERTRGIGIGVVLATVG*
JGI25133J35611_101637621	3300002514	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLERTRGIGIGVVLAT
JGI25136J39404_10008591	3300002760	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLERT
JGI25136J39404_10307001	3300002760	Marine	MSEVSDLEIGKLIQKVDNLQIMVSEQNDRLDKLDKQLERTRGIGI
JGI25136J39404_10918952	3300002760	Marine	MGDVSDLEIGKLIQKVDSLEVMVREQNDRLDKLDKQLERTRGIGI
JGI25136J39404_11128531	3300002760	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLERTRGIGIGVVLATVGLG
Ga0066848_100483011	3300005408	Marine	MSEVSDVEIGRLIEKVNSLEEAVRSSNERLDKLDYQLERTR
Ga0066852_103191961	3300005604	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDKLDQQ
Ga0082015_10667952	3300006090	Marine	MSEVSDVEIGRLIEKVNSLEEAVRSSNERLDKLDYQLERTRGI
Ga0068493_107937721	3300006341	Marine	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDKQLERTRG
Ga0098033_10943681	3300006736	Marine	MSEVSDVELGKLIQQISTLEVMVKEQNSRLDKLDQQLERTRGIGIGIVLATVG
Ga0098064_1397843	3300006988	Marine	MSEVSDVELGKLIQQISTLETMVKEQNIRLDKLDQQLERTRGI
Ga0105664_10633191	3300007756	Background Seawater	MSDVSDLEIGKLIQKVDSLEVMVREQNNRLDKLDQQLERTRGIGIGVVLATVGL
Ga0105668_10826953	3300007758	Background Seawater	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDKQLERTRGIGIGVVL
Ga0098052_13034543	3300008050	Marine	MMSEVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQQLER
Ga0114898_10266451	3300008216	Deep Ocean	VSEVSDVEIGKLIQKVSSLEEMVREQNSRLDKLDQQLERTRGIGIGVVLA
Ga0114899_12417122	3300008217	Deep Ocean	MSEVSDVELGKLIQQISTLEVMVKEQNVRLDKLDQQLERTRGIGIGIVLATVGL
Ga0114904_10053594	3300008218	Deep Ocean	MSEVSDVEIGKLIQKVESLEVMVRGQNDRLDKLDQQLERTRGI
Ga0114904_10779061	3300008218	Deep Ocean	MMSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDKQLERTRGIG
Ga0114905_11065733	3300008219	Deep Ocean	MSEVSDLEIGRLIQKVESLESMVREQNNRLDKLDQQL
Ga0114905_11135751	3300008219	Deep Ocean	MSEVSDVELGKLIQQISTLEVMVKEQNIRLDKLDQQLERTR
Ga0114910_10034846	3300008220	Deep Ocean	MSEVSDVEIGKLIQKVDSLECMVREQNNRLDKLDQQLERTRG
Ga0114910_11605251	3300008220	Deep Ocean	MSEVSDVEIGKLIQKVDSLECMVREQNNRLDKLDQQLERTRGIGIGVVLATVGLS
Ga0114903_10643645	3300009412	Deep Ocean	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLERTRG
Ga0114903_10756203	3300009412	Deep Ocean	MSDVSDLEIGKLIQKVDSLQVMVREQNDRLDKLDKQLERTRGIGIGVVLATVGLS
Ga0114903_11267502	3300009412	Deep Ocean	MSEVSDLEIGRLIQKVENLQVMVKEQNDRLDKLDQQLERTRGIG
Ga0114903_11287341	3300009412	Deep Ocean	MSEVSDLEIGRLIQKVESLESMVREQNNRLDKLDQQLERTRGIGIGVILATIGLS
Ga0114903_11432881	3300009412	Deep Ocean	MSEVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQQLERTRGI
Ga0114902_10496014	3300009413	Deep Ocean	MSEVSDVEIGKLIQKVDSLECMVREQNNRLDKLDQQ
Ga0114909_10124571	3300009414	Deep Ocean	MSEVSDLEIGKFIQNGDSLEVMVREQNDRVDRLDQQLERTRGIGIG
Ga0114908_10244291	3300009418	Deep Ocean	MSEVSDVELGKLIQQISTLEVMVKEQNIRLDKLDQQ
Ga0114908_12110602	3300009418	Deep Ocean	MSEVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQQLERTRGIGIGVVLATVG
Ga0114901_10886131	3300009604	Deep Ocean	MSEVSDLEIGRLIQKVESLESMVREQNNRLDKLDQQLERTRGIGIG
Ga0114901_11191081	3300009604	Deep Ocean	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDKLDQQLERTRGIGI
Ga0098047_101973751	3300010155	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDKLDQQLER
Ga0098047_103841081	3300010155	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDKLDQQLERTRGIGIGVVLATV
Ga0114934_102258265	3300011013	Deep Subsurface	MSEVSDVELGKLIQQISTLETMVKEQNIRLDKLDQQLE
Ga0181432_12421942	3300017775	Seawater	MSDVSDLEIGKLIQKVDNLQIMVSEQNDRLDKLDKQLERTRGIGIGVVLATVGLS
Ga0206691_10423811	3300021342	Seawater	MMSEVSDLEIGKLIQKVDNLQIMVSEQNDRLDKLDKQLERTR
Ga0187827_108289781	3300022227	Seawater	MSEVSDVEIGRLIEKVNSLEEAVRSSNERLDKLDYQL
(restricted) Ga0255048_100505713	3300024518	Seawater	MSEVSDVELGKLIQQISTLEGMVKEQNTRLDKLDQQLERTRGIGIGIV
(restricted) Ga0255048_101756571	3300024518	Seawater	MSDVSDLEIGKLIQKVDNLEVMVREQNDRLDRLDQQLERT
(restricted) Ga0255047_100058577	3300024520	Seawater	MSDVSDLEIGKLIQKVDNLEAMVREQNDRLDRLDQQLERTRGIGIGVVLA
(restricted) Ga0255047_100730163	3300024520	Seawater	MSEVSDVELGKLIQQISTLEGMVKEQNTRLDKLDQQLERTRGIGIGIVLA
(restricted) Ga0255047_105041991	3300024520	Seawater	VSEVSDVELGKLIQQISTLEVMVKEQNIRLDKLDQQLERTRGIGIGIVLATV
Ga0207902_10097211	3300025046	Marine	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDRLDKQLERTRGIGIGVVLAT
Ga0207902_10368172	3300025046	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLERTRGIGIGVVLATVGL
Ga0207898_10193261	3300025049	Marine	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDKQL
Ga0207898_10506761	3300025049	Marine	MSEVSDLEIGKLIQKVDSLQVMVREQNDRLDRLDQQLE
Ga0207892_10205163	3300025050	Marine	MSEVSDLEIGKLIQKVDNLQIMVSEQNDRLDKLDKQLERTRGIGIGVVLATVGLS
Ga0207906_10016081	3300025052	Marine	MGDVSDLEIGKLIQKVDSLEVMVREQNNRLDKLDQQLERTRGIGIGVV
Ga0207906_10034954	3300025052	Marine	MSDVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQQLERTRGI
Ga0207906_10068761	3300025052	Marine	MSDVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQQLERTRGIGI
Ga0207906_10394361	3300025052	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLERTRGIGIGVVLATVGIS
Ga0207887_10140953	3300025069	Marine	MSDVSDLEIGKLIQKVDSLEVMVREQNDRLDKLDQQL
Ga0207887_10253013	3300025069	Marine	MSEVSDLEIGKLIQKVDNLQIMVSEQNDRLDKLDKQ
Ga0207887_10310231	3300025069	Marine	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDKQLERTRGIGI
Ga0207887_10389722	3300025069	Marine	MSEVSDLEIGKLIQKVDNLQIMVSEQNDRLDKLDKQLERTRGIG
Ga0207887_10479163	3300025069	Marine	MSEVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQQLERTRGIGIGVVLATVGLS
Ga0208920_10482261	3300025072	Marine	MSEVSDLEIGKLIQKVNNLEIMVREQNDRLDRLDQQLERTR
Ga0208156_10124395	3300025082	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLE
Ga0209644_10101363	3300025125	Marine	MSEVSDLEIGKLIQKVDSLEVMVREQNDRLDKLDQQLERTRG
Ga0209644_11307491	3300025125	Marine	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDKQLERTR
Ga0209644_11809421	3300025125	Marine	VSDVSDLEIGKLIQKVDSLEVMVREQNDRLDKLDQQLERTRGI
Ga0208919_12064451	3300025128	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQ
Ga0209128_10103761	3300025131	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLERTRGIGI
Ga0209128_11381653	3300025131	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLERTRGIGIGVVLA
Ga0209756_10152451	3300025141	Marine	MSEVSDLEIGKLIQKVNNLEIMVREQNDRLDRLDQQLERTRGIGIGVVLATV
Ga0208182_10432563	3300025251	Deep Ocean	VSEVSDVELGKLIQQISTLEVMVKEQNVRLDKLDQQLERTR
Ga0208182_10459033	3300025251	Deep Ocean	MSEVSDVEIGKLIQKVDSLECMVREQNNRLDKLDQQLER
Ga0208813_10140251	3300025270	Deep Ocean	MSEVSDVEIGKLIQKVESLEVMVRGQNDRLDKLDQQLERTRGIGI
Ga0208813_10927481	3300025270	Deep Ocean	MSEVSDVEIGKLIQKVESLEVMVRGQNDRLDKLDQQLERTRGIGIG
Ga0208180_10761482	3300025277	Deep Ocean	MSEVSDVEIGKLIQKVESLEVMVRGQNDRLDKLDQQLERTRGIGIGVVLATVGL
Ga0208180_11392632	3300025277	Deep Ocean	VSEVSDVELGKLIQQISTLEVMVKEQNVRLDKLDQQLERTRGIGIGIVLATVGL
Ga0208315_10158275	3300025286	Deep Ocean	MSEVSDLEIGKLIQKVESLEVMVREQNDRLDKLDQQLERTRGIGIGVVLATVG
Ga0208934_10666591	3300025293	Deep Ocean	MSEVSDVEIGKLIQKVESLEVMVRGQNDRLDKLDQQLE
Ga0208684_10097774	3300025305	Deep Ocean	MSEVSDVEIGKLIQKVESLEVMVRGQNDRLDKLDQQLERTRGIGIGVVLAT
Ga0208684_10136503	3300025305	Deep Ocean	MSEVSDVEIGKLIQKVDSLECMVREQNNRLDKLDQQLERTR
Ga0208684_10744142	3300025305	Deep Ocean	MSEVSDVEIGKLIQKVESLEVMVRGQNDRLDKLDQQLERTRGIGIGVVLATVGLS
Ga0208684_11356521	3300025305	Deep Ocean	MSDVSDLEIGKLIQKVDSLQVMVREQNDRLDKLDKQLERTRGIGIGVVLATVGL
Ga0208684_11482441	3300025305	Deep Ocean	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQL
Ga0209757_100756741	3300025873	Marine	MSEVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQQLERTRGIGIGVV
Ga0209757_101627221	3300025873	Marine	MSEVSDLEIGKLIQKVDNLQIMVSEQNDRLDKLDKQLE
Ga0209757_101792872	3300025873	Marine	MSEVSDLEIGKLIQKVDNLQIMVSEQNDRLDKLDKQLERT
Ga0209757_101820831	3300025873	Marine	MGDVSDLEIGKLIQKVDSLEVMVREQNDRLDKLDKQLERTRGIGIGV
Ga0209757_102446811	3300025873	Marine	MSEVSDLEIGKLIQKVDNLQIMVSEQNDRLDKLDKQL
Ga0209757_102558462	3300025873	Marine	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDKQLER
Ga0209757_103084131	3300025873	Marine	MGDVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQQLERTRGIGIGVVL
Ga0208523_10573231	3300026191	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLERTRGIGIG
Ga0208641_11758722	3300026268	Marine	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDKLDQQLERTRGIGIGV
(restricted) Ga0255055_106001621	3300027881	Seawater	MSEVSDVELGKLIQQISTLEGMVKEQNTRLDKLDQQLERTRGIGI
Ga0256380_10223403	3300028039	Seawater	MSEVSDVEIGKLIQKVESLEVMVREQNNRLDKLDQQLERTRGIGIGV
Ga0256380_10404233	3300028039	Seawater	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDK
Ga0310121_100390723	3300031801	Marine	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDKQLE
Ga0310121_104616791	3300031801	Marine	MSDVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQQLERTRGIGIGVVL
Ga0310121_107063241	3300031801	Marine	MSDVSDLEIGKLIQKVDSLEVMVREQNNRLDKLDQQLERTRGIGIG
Ga0310124_106085971	3300031804	Marine	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDKQ
Ga0315318_105650701	3300031886	Seawater	MSDVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQ
Ga0315303_11284591	3300032146	Marine	VSDVSDLEIGKLIQKVDSLEVMVREQNNRLDKLDQQLERTRGIGIGVV
Ga0310345_100466671	3300032278	Seawater	MSDVSDLEIGKLIQKVDSLEVMVREQNNRLDKLDQQ
Ga0315334_118447741	3300032360	Seawater	MSEVSDVELGKLIQKITTLEEAVREQNGRLDKLDQQ
Ga0310342_1001050771	3300032820	Seawater	MSEVSDLEIGKLIQKVDSLETMVREQNDRLDRLDQQLERTRGIGIGVVLATVGLS
Ga0326756_049067_395_523	3300034629	Filtered Seawater	MSEVSDLEIGKLIQKVDNLQVMVSEQNDRLDKLDKQLERTRGI
Ga0326748_036374_1_120	3300034656	Filtered Seawater	MSEVSDLEIGKLIQKVDSLEVMVREQNDRLDRLDQQLERT