Metagenome / Metatranscriptome Family F090361

Overview

Basic Information

• Family ID: F090361
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 108
• Average Sequence Length: 73 residues
• Representative Sequence: MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
• Number of Associated Samples: 102
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 59.05 %
• % of genes near scaffold ends (potentially truncated): 50.00 %
• % of genes from short scaffolds (< 2000 bps): 88.89 %
• Associated GOLD sequencing projects: 96
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (71.296 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.037 % of family members)
• Environment Ontology (ENVO): Unclassified (44.444 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (58.333 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 89.19%
  β-sheet: 0.00%
  Coil/Unstructured: 10.81%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF03729	DUF308	5.56
PF03358	FMN_red	2.78
PF01553	Acyltransferase	1.85
PF13586	DDE_Tnp_1_2	0.93
PF07729	FCD	0.93
PF09084	NMT1	0.93
PF13701	DDE_Tnp_1_4	0.93
PF02371	Transposase_20	0.93
PF01694	Rhomboid	0.93
PF13358	DDE_3	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	5.56
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.93
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.93
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.93
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.93
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.93
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.30 %
Unclassified	root	N/A	28.70 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.30 %
Unclassified	root	N/A	28.70 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.30 %
Unclassified	root	N/A	28.70 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	63.89 %
Unclassified	root	N/A	28.70 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.89 %
Unclassified	root	N/A	28.70 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	57.41 %
Unclassified	root	N/A	28.70 %

Level 7

Name	Rank	Taxonomy	Distribution
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	53.70 %
Unclassified	root	N/A	28.70 %

Level 8

Name	Rank	Taxonomy	Distribution
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	0.93 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	48.15 %
Unclassified	root	N/A	28.70 %

Level 9

Name	Rank	Taxonomy	Distribution
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	0.93 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	42.59 %
Unclassified	root	N/A	28.70 %

Level 10

Name	Rank	Taxonomy	Distribution
Gordonia sputi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia sputi	0.93 %
Unclassified	root	N/A	28.70 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	22.22 %

Level 11

Name	Rank	Taxonomy	Distribution
Gordonia sputi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia sputi	0.93 %
Mycobacterium sp. 155	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	22.22 %
Unclassified	root	N/A	28.70 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2189573004|GZGWRS402HC94I	Not Available	517
3300000956|JGI10216J12902_118282224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	961
3300002070|JGI24750J21931_1040534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	706
3300002245|JGIcombinedJ26739_101555049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	558
3300003219|JGI26341J46601_10003360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	5299
3300005328|Ga0070676_10175789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1388
3300005334|Ga0068869_101510281	Not Available	596
3300005337|Ga0070682_100422429	Not Available	1013
3300005347|Ga0070668_101585923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	599
3300005353|Ga0070669_100809631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	796

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.19%
Host-Associated	Host-Associated	39.81%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	3.70%
Plants	Host-Associated → Plants	39.81%
Terrestrial	Environmental → Terrestrial	56.48%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	3.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.30%
Soil	Environmental → Terrestrial → Soil	56.48%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.59%
Loam	Environmental → Terrestrial → Soil → Loam	13.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.11%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.70%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.56%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_05649710	2189573004	Grass Soil	MSETRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKDHVDR
JGI10216J12902_1182822241	3300000956	Soil	VLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
JGI24750J21931_10405341	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTXQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
JGIcombinedJ26739_1015550491	3300002245	Forest Soil	MSVPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKDRVDR*
JGI26341J46601_100033602	3300003219	Bog Forest Soil	MSVTRDILRATLLSAAAGLLAVGANTLRNALVEKRETADLTTQQIEDAISALDPSTRAAVIGRLTTDAGQQIKDRFGH*
Ga0070676_101757891	3300005328	Miscanthus Rhizosphere	RNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0068869_1015102813	3300005334	Miscanthus Rhizosphere	LLTAAAGLLAVAASVLREKKATVDLTTKQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070682_1004224291	3300005337	Corn Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0070668_1015859231	3300005347	Switchgrass Rhizosphere	VVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070669_1008096311	3300005353	Switchgrass Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTA
Ga0070671_1011726222	3300005355	Switchgrass Rhizosphere	LLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070667_1006411921	3300005367	Switchgrass Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070713_1014594561	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0070701_103765321	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	AAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0070705_1004178991	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	NILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070700_1004033601	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	WKGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070678_1022377951	3300005456	Miscanthus Rhizosphere	MSVPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKEVKDHVDR*
Ga0070662_1006944642	3300005457	Corn Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070662_1007748661	3300005457	Corn Rhizosphere	KGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070697_1005780271	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPRNILRVLLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0068853_1001153511	3300005539	Corn Rhizosphere	LRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070704_1012798021	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKD
Ga0068852_1016649941	3300005616	Corn Rhizosphere	RNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0068859_1017845172	3300005617	Switchgrass Rhizosphere	MSVPRNILRVLLLTAAAGLLAVAASVLREKKATVDLTTKQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0068862_1014468182	3300005844	Switchgrass Rhizosphere	VLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0081540_12271712	3300005983	Tabebuia Heterophylla Rhizosphere	MSVPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVHQVKDHVDR*
Ga0074055_101581511	3300006573	Soil	MSEPRTILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRL
Ga0105244_103723711	3300009036	Miscanthus Rhizosphere	RIESPWKGTEMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0105240_112878262	3300009093	Corn Rhizosphere	MSAPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0105245_128440532	3300009098	Miscanthus Rhizosphere	AAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKDHVDR
Ga0099792_107030141	3300009143	Vadose Zone Soil	VTRRRAYHRFIGLWLGSKARKGTEMSVPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKDHVDR*
Ga0105243_113658971	3300009148	Miscanthus Rhizosphere	RVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0105242_100800581	3300009176	Miscanthus Rhizosphere	ILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0105248_109386111	3300009177	Switchgrass Rhizosphere	PRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0105237_119769362	3300009545	Corn Rhizosphere	MSEPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKEVKDHVDR*
Ga0126384_115573612	3300010046	Tropical Forest Soil	MSAPRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0099796_102988202	3300010159	Vadose Zone Soil	MSVPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKEHVDR*
Ga0134125_112960342	3300010371	Terrestrial Soil	SVPRNILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0105239_109007392	3300010375	Corn Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKDHVDR*
Ga0134127_101955293	3300010399	Terrestrial Soil	MSAPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQ
Ga0134122_110255841	3300010400	Terrestrial Soil	MSAPTNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKEVKDHVDR*
Ga0134121_129517611	3300010401	Terrestrial Soil	KMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0134123_119034421	3300010403	Terrestrial Soil	DRKPRKGTEMSVPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVNAHVDR*
Ga0134123_119368991	3300010403	Terrestrial Soil	AAGWLDAAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0137397_106242641	3300012685	Vadose Zone Soil	MSVPRNILRIVLLAAAAGLLAVAASVLREEKATVDLTTQEIEDAISALDPGTRAAVIGRLTADAVQQVKDRVDR*
Ga0137397_108502761	3300012685	Vadose Zone Soil	MSVPRDILRIVLLAAAAGLLAVAASVSREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKDHVDR*
Ga0157291_101028632	3300012902	Soil	MSVPRNMLRVVLLTAAAGLLAVAASVLREKKATVDLTAQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0157289_101654312	3300012903	Soil	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGARAAVIGRLTADAVQQVKDHIDR*
Ga0157286_100038331	3300012908	Soil	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAIQQVKDHIDR
Ga0157286_101830931	3300012908	Soil	TAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVHQVKEHIDR*
Ga0157301_101039702	3300012911	Soil	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDPTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKNHIDR*
Ga0157298_101521891	3300012913	Soil	SVHWSVARIESPWKGTEMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0137394_114297431	3300012922	Vadose Zone Soil	MSAPRNILRIVLLTAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKDHVDR*
Ga0126375_114093261	3300012948	Tropical Forest Soil	MSVPRNILRIVLLAAAAGLLAVAASVIREKKMTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVHQVKDHVDR*
Ga0164300_102732561	3300012951	Soil	MSAPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0164302_118599152	3300012961	Soil	SVARIESPWKGTTMSVPRNILRVVLLTAAAGLPAVAASGLRVKKATVELTTQQSEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0157371_105123942	3300013102	Corn Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAV*
Ga0157374_126788901	3300013296	Miscanthus Rhizosphere	WSVARIESPWKGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIHR*
Ga0157377_111807842	3300014745	Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKDH
Ga0173478_106916322	3300015201	Soil	MSGPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0137412_112009772	3300015242	Vadose Zone Soil	MRVPRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKDHVDR*
Ga0163161_111502281	3300017792	Switchgrass Rhizosphere	PRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0190269_110576021	3300018465	Soil	MSVPRNILRIVLLTAAAGLLAVAASVLREKKETVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0173481_101175281	3300019356	Soil	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0173482_103336201	3300019361	Soil	MSAPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0210407_101448902	3300020579	Soil	MSVPRNTLRIVLLTAAAGLLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0193699_102533992	3300021363	Soil	MSVDRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0210393_105626582	3300021401	Soil	MSVPRNTLRILLLTAAAGLLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0210389_100208223	3300021404	Soil	MSVPRNTLRIVLLTAAAGSLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0210392_100516083	3300021475	Soil	MSVPRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0210410_118347732	3300021479	Soil	RIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKDRVDR
Ga0247752_10869671	3300023071	Soil	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDH
Ga0207697_102812281	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207656_102827813	3300025321	Corn Rhizosphere	MSVPRNILRVLLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRGAVIGRLTADAVQQVKDHIDR
Ga0207682_102642252	3300025893	Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDSGVRAAVIGRLTADAVQQVKDHIDR
Ga0207692_104788051	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVVGRL
Ga0207642_102403211	3300025899	Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0207685_101541371	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	ENPWKGTEMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207643_104147481	3300025908	Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADEVQQVKDHIDR
Ga0207663_100705232	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPRNILRVLLLTAAAGLLAVAASVLREKKATVDLTTKQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207659_104818971	3300025926	Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQ
Ga0207700_116652491	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPRNILRIVLLTAEAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0207644_116634441	3300025931	Switchgrass Rhizosphere	VVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207670_111221281	3300025936	Switchgrass Rhizosphere	KGTEMSAPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207665_104726091	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0207689_109978732	3300025942	Miscanthus Rhizosphere	LLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207640_105631141	3300025981	Corn Rhizosphere	TAAAGLLAVAASVLREKKATVDLTAQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVD
Ga0207703_103806941	3300026035	Switchgrass Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKD
Ga0207678_110540961	3300026067	Corn Rhizosphere	GVTRRRLPSVHWSVARIESPWKGTEMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207708_101590121	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AAAGLLAVAASVLREKKATADLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207641_109057741	3300026088	Switchgrass Rhizosphere	PTIVHWSVARIESPWKGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207641_112965181	3300026088	Switchgrass Rhizosphere	ILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0207675_1012916381	3300026118	Switchgrass Rhizosphere	MSEPRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKEHVDR
Ga0207698_113339711	3300026142	Corn Rhizosphere	HWSVARIESPWKGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0209656_100009686	3300027812	Bog Forest Soil	MSVTRDILRATLLSAAAGLLAVGANTLRNALVEKRETADLTTQQIEDAISALDPSTRAAVIGRLTTDAGQQIKDRFGH
Ga0209656_102709202	3300027812	Bog Forest Soil	MSVTRDILRATLLSAAAGLLAVAANTLRNALVEKRETADLTTQQIEDAISALDPSTRAAVIGRLTADAGQQIKDRFGH
Ga0209039_100189083	3300027825	Bog Forest Soil	MSVTRDILRATLLSAAAGLLAVGANTLRNALVEKRETADLTTQQIEDAISALDPSTRAAVIGRLTADAGQQIKDRFGH
Ga0247820_106965991	3300028597	Soil	MSVPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHI
Ga0247819_108465912	3300028608	Soil	MSAPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADA
Ga0170834_1061731981	3300031057	Forest Soil	MSVPRNILRIVLLAGAAGLLAVAASVLRDKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVKQVKDHVDR
Ga0170824_1223711591	3300031231	Forest Soil	SDRKPRKEAEMSVPRDILRIVLLAAAGAGLLAVAASVLREKKETVDLTTQQIEAAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0170818_1071085011	3300031474	Forest Soil	MSVPRDILRIVLLAAAGAGLLAVAASVLREKKETVDLTTQQIEAAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0307476_104752892	3300031715	Hardwood Forest Soil	MSVPRNTLRIVLLTAAAGLLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDRVDR
Ga0307474_101230141	3300031718	Hardwood Forest Soil	MSVPRNTLRIVLLTAAAGLLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKNHVDR
Ga0307468_1003440593	3300031740	Hardwood Forest Soil	MSVPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0307479_105822214	3300031962	Hardwood Forest Soil	MSVPRNTLRIVLLTAAAGLLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKKPR
Ga0307471_1035851321	3300032180	Hardwood Forest Soil	LPSVHWSVARIESPWKGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0373958_0225978_252_476	3300034819	Rhizosphere Soil	MSAPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR