Metagenome / Metatranscriptome Family F090360

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090360
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	102 residues
Representative Sequence	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFLELGYTFERLLSDLELAGVERSLVMEKLF
Number of Associated Samples	83
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.37 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	89.81 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (38.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.037 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.52% β-sheet: 30.30% Coil/Unstructured: 43.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.58.4.18: YbaA-like	d2okqa1	2okq	0.76282
d.58.4.17: SOR-like	d6m35a_	6m35	0.75107
d.58.4.0: automated matches	d3qmqa1	3qmq	0.751
d.58.4.0: automated matches	d4dpoa1	4dpo	0.74738
d.58.4.5: PG130-like	d1iuja_	1iuj	0.74361

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00115	COX1	7.41
PF02518	HATPase_c	2.78
PF13442	Cytochrome_CBB3	1.85
PF13478	XdhC_C	0.93
PF00072	Response_reg	0.93
PF00486	Trans_reg_C	0.93
PF01263	Aldose_epim	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.93
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.30 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.30 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101854362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2129	Open in IMG/M
3300002568\|C688J35102_119000950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300003321\|soilH1_10113101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1699	Open in IMG/M
3300003321\|soilH1_10365122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1276	Open in IMG/M
3300004479\|Ga0062595_100528709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	895	Open in IMG/M
3300004479\|Ga0062595_101201306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	673	Open in IMG/M
3300005175\|Ga0066673_10436034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300005178\|Ga0066688_10342017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M
3300005179\|Ga0066684_10257793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1147	Open in IMG/M
3300005179\|Ga0066684_10750992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300005180\|Ga0066685_10615380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300005181\|Ga0066678_10362048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300005186\|Ga0066676_10102592	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300005327\|Ga0070658_10003427	All Organisms → cellular organisms → Bacteria	13038	Open in IMG/M
3300005435\|Ga0070714_102210662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300005445\|Ga0070708_100376720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1338	Open in IMG/M
3300005454\|Ga0066687_10806913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300005458\|Ga0070681_11989861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300005540\|Ga0066697_10779681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300005552\|Ga0066701_10524240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300005555\|Ga0066692_10272151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300005556\|Ga0066707_10158926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1437	Open in IMG/M
3300005560\|Ga0066670_10823576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300005561\|Ga0066699_10632908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	768	Open in IMG/M
3300005561\|Ga0066699_10947735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300005576\|Ga0066708_10046647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2409	Open in IMG/M
3300005598\|Ga0066706_10254456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1368	Open in IMG/M
3300005874\|Ga0075288_1069384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300005893\|Ga0075278_1077457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300006032\|Ga0066696_10229669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1194	Open in IMG/M
3300006046\|Ga0066652_101186140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300006573\|Ga0074055_10648456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300006794\|Ga0066658_10064349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1621	Open in IMG/M
3300006800\|Ga0066660_10820908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300006800\|Ga0066660_11156649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300009012\|Ga0066710_101380876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1092	Open in IMG/M
3300009012\|Ga0066710_102139009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	820	Open in IMG/M
3300009090\|Ga0099827_11370947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300009090\|Ga0099827_11689730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300009137\|Ga0066709_101728135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300009137\|Ga0066709_104623178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300009147\|Ga0114129_13502646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300010147\|Ga0126319_1272536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300010147\|Ga0126319_1273934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1488	Open in IMG/M
3300010147\|Ga0126319_1549117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300010303\|Ga0134082_10172002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	881	Open in IMG/M
3300012011\|Ga0120152_1131913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300012198\|Ga0137364_10425540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	995	Open in IMG/M
3300012200\|Ga0137382_10259197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1206	Open in IMG/M
3300012200\|Ga0137382_10407688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300012200\|Ga0137382_10980423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300012201\|Ga0137365_10318602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1151	Open in IMG/M
3300012201\|Ga0137365_10485421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	909	Open in IMG/M
3300012203\|Ga0137399_10732455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300012204\|Ga0137374_10016180	All Organisms → cellular organisms → Bacteria	8576	Open in IMG/M
3300012208\|Ga0137376_10293297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1411	Open in IMG/M
3300012208\|Ga0137376_10351300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1280	Open in IMG/M
3300012208\|Ga0137376_10473232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1087	Open in IMG/M
3300012211\|Ga0137377_10060454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3526	Open in IMG/M
3300012356\|Ga0137371_10040233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3609	Open in IMG/M
3300012356\|Ga0137371_10054125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3104	Open in IMG/M
3300012361\|Ga0137360_10858882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300012683\|Ga0137398_10888111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300012930\|Ga0137407_10825977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300012955\|Ga0164298_10447104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300012975\|Ga0134110_10237057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300013772\|Ga0120158_10086029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1952	Open in IMG/M
3300013772\|Ga0120158_10389342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	644	Open in IMG/M
3300014157\|Ga0134078_10164986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	881	Open in IMG/M
3300014157\|Ga0134078_10418600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300014166\|Ga0134079_10215342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300015164\|Ga0167652_1020980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1331	Open in IMG/M
3300015242\|Ga0137412_10958281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300015264\|Ga0137403_10771175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300015358\|Ga0134089_10109902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1063	Open in IMG/M
3300018061\|Ga0184619_10246312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300018071\|Ga0184618_10030813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1842	Open in IMG/M
3300018431\|Ga0066655_10263084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1108	Open in IMG/M
3300018433\|Ga0066667_10333857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1197	Open in IMG/M
3300018433\|Ga0066667_12075915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300018482\|Ga0066669_10314976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300018482\|Ga0066669_10440080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1116	Open in IMG/M
3300019789\|Ga0137408_1071110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300019888\|Ga0193751_1252838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300021080\|Ga0210382_10478013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300021344\|Ga0193719_10313193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300021363\|Ga0193699_10043524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1718	Open in IMG/M
3300021363\|Ga0193699_10212829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300021363\|Ga0193699_10319254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300025909\|Ga0207705_10150224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1745	Open in IMG/M
3300025944\|Ga0207661_10964463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300026523\|Ga0209808_1125381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300026550\|Ga0209474_10033939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3791	Open in IMG/M
3300026550\|Ga0209474_10090574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2080	Open in IMG/M
3300026552\|Ga0209577_10017025	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6491	Open in IMG/M
3300026552\|Ga0209577_10268095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300027815\|Ga0209726_10012929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7976	Open in IMG/M
3300028710\|Ga0307322_10091894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300028714\|Ga0307309_10017014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1374	Open in IMG/M
3300028718\|Ga0307307_10264699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300028784\|Ga0307282_10365378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300028784\|Ga0307282_10441970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300028802\|Ga0307503_10518817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300028803\|Ga0307281_10243949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300028807\|Ga0307305_10332434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300028811\|Ga0307292_10351396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300028828\|Ga0307312_10768178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300028884\|Ga0307308_10539750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.22%
Host-Associated	Host-Associated	2.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.74%
Aquatic	Environmental → Aquatic	6.48%
Plants	Host-Associated → Plants	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.74%
Freshwater	Environmental → Aquatic → Freshwater	4.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.78%
Sediment	Environmental → Aquatic → Sediment	1.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.33%
Loam	Environmental → Terrestrial → Soil → Loam	5.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.56%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.85%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1018543622	3300000364	Soil	MAAAPPFVSYATMSEAVVANADWPMLYASLQAHKAHVQEYPGCQRMEVYVAVDDEGSMRLHCYTTWDTPEQLEVFVDRGYTFERLLADVGVSAAERSLVMEKLF*
C688J35102_1190009502	3300002568	Soil	MAAAPPFVSYSTMSEATVPASEWTYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLDLGYTFERLLADLEL
soilH1_101131013	3300003321	Sugarcane Root And Bulk Soil	MAAAPPFVSYSTVSEAIVPAGEWPFLYASMQAYKAHVQEYPGCQTMEAFVGVRDDEAIQILCVTTWDTPEQLDVFLDRGYTFERLLADVGETLPERSLVMEKVF*
soilH1_103651223	3300003321	Sugarcane Root And Bulk Soil	MAAAPPFVSYSTMSEAVVPLSQWSFLYASLQAHKAHVQEYPGCQRMEVWAALDDDGGMRLHCYTTWDTPEQLEVFLERGYTFERLLADVGSPAAERSLVMEKLF*
Ga0062595_1005287093	3300004479	Soil	HRQRADLLMAAAPPFVSYSTMSETTVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLEIGYTFERLLADLELQGVERSLVMEKLF*
Ga0062595_1012013062	3300004479	Soil	MAVAPPFVSYSSMSETVVSADEWSYLYASLQAFKAHVQEYPGCQRMEVWAALDDDGGMRLHCYTTWDTPEQLEAYLELGYTFERLLADV
Ga0066673_104360341	3300005175	Soil	MAAAPPYVAYSSMSEAVAPASEWPYLYASLQAYKAHVQEYPGCQRMELFASVDDDGGMRIHCYTVWDTPEQLDAFVELGYTFERLLSDLELPAVDRSLVMEKLF*
Ga0066688_103420171	3300005178	Soil	PPFVSYSTMSEAVVPLEDWPHLYASLQAHKAHVQEYPGCQRFEAWVDVEETGVRVHCYTTWDTVEQLEVFVERGYTFERLLVDVGVPAAERSLVMEKLF*
Ga0066684_102577932	3300005179	Soil	MIAAPPFAAYSTMTEAVVPSAEWPYVYASLQAFKAHVQEYPGCQRLEVFVFVEDDVGIRVHCYSTWDTLDQLEAFLERGYTFERMLADTADGAVERSLVMEKLF*
Ga0066684_107509922	3300005179	Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQDYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFVELGYTFERLLSDLELPAVDRSLVMEKLF*
Ga0066685_106153802	3300005180	Soil	MAAPPFVSYSTLTEAVVPADEWSFLYASLQAQKAHVQEYPGCQRFEVWIDPEEAGVRVHCYTTWDTAEQLDAFVERGYTVERLLSDAGLPAAERSLVMEKVF*
Ga0066678_103620483	3300005181	Soil	YSTLTEAVVPADEWSFLYASLQAQRAHVQEYPGCQRFEVWIDPEEAGVRVHCYTTWDTAEQLDAFVERGYTVERLLSDAGLPAAERSLVMEKVF*
Ga0066676_101025921	3300005186	Soil	MAVGVAPPFVSYSSMTEAVVPASEWSYLYASLQALKAHVQEYPGCQRMEVWAALDDDGNMRLHCYTTWDTPEQLEAFLERGYTFERMLHDVAGITAQPTLVMEKVF*
Ga0070658_100034273	3300005327	Corn Rhizosphere	MAAAPPFVSYSSMSEAIVSSTDWPFLYASLQAFKAHVQEYPGCQRTEAFAALQDDGSMRIHCYTTWDTPEQLDVYLEYGYTFERLLGDVGLPSQARTLLMEKLF*
Ga0070714_1022106621	3300005435	Agricultural Soil	MAAAPPFVSYSKMSETTVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLEIGYTFERLLADLELQGVERSLVMEKLF*
Ga0070708_1003767203	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAAAPPFVSYSTMSETTVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLEIGYTFERLLADLELQGVERSLVMEKLF*
Ga0066687_108069131	3300005454	Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFLELGYTFERLLSDLELAGVERSLVMEKLF*
Ga0070681_119898611	3300005458	Corn Rhizosphere	MAAAPPFVSYSSMSEAIVSSTDWPFLYASLQAFKAHVQEYPGCQRTEAFAAFQDDGSMRIHCYTTWDTPEQLDVYLEYGYTFERLLGDVGLPSQARTLLMEKLF*
Ga0066697_107796812	3300005540	Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQRMELFASVDDDGGMRIHCYTVWDTPEQLDAFVELGYTFERLLLDLELPAVDRSLVMEKLF*
Ga0066701_105242403	3300005552	Soil	MAAAPPFVSYSTMSEAVVPLEDWPHLYASLQAHKAHVQEYPGCQRFEAWVDVEENGVRVHCYTTWDTVEQLEVFVERGYTFERLLADVGMPAAQRSLVMEKLF*
Ga0066692_102721512	3300005555	Soil	MAAAPPFVAYSTMSDAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDGGGGGMRIHCYTVWDTPEQLDAFLELGYTFERLVADLELAGVERSLVMEKLF*
Ga0066707_101589263	3300005556	Soil	MGVAPPFVSYSTMSEAVVPLEDWPHLYASLQAHKAHVQEYPGCQRFEAWVDVEDAGMRVHCYTTWDTVEQLEVFLERGYTFERLLADVGMPAAQRSLVMEKLF*
Ga0066670_108235761	3300005560	Soil	MAAAPPYVAYSSMSEAVAPASEWPYLYASLQAYKAHVQEYPGCQRMELFASVDDDGGMRIHCYTVWDTPEQLDAFLELGYTFERLLADLELTEVERSLSMEKLF*
Ga0066699_106329083	3300005561	Soil	MAAAPPFVSYSTMSEAVVPATDWAYLYASLQAHKAHVQEYPGCQHLEVWAALDDDGSMRLHCYTTWDTPEQLEVFLERGYTFERLLADVGLPAAERSLVMEKLF*
Ga0066699_109477352	3300005561	Soil	MAAAPPFVAYSTMSEAVAPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAIDDDGGMRIHCYTVWDTPEQLDAFLELGYTFERLLSDLELAGVERSLVMEKLF*
Ga0066708_100466473	3300005576	Soil	MAAAPPYVAYSSMSEAVAPASEWPYLYASLQAYKAHVQEYPGCQRMELFASVDDDGGMRIHCYTVWDTPEQLEVFLDLGYTFERLLADLDLAGVERSLVMEKLF*
Ga0066706_102544562	3300005598	Soil	MAAAPPFVAYSVMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFLELGYTFERLLADLELTEVERSLSMEKLF*
Ga0075288_10693841	3300005874	Rice Paddy Soil	TGLLMAAAPPFVSYSTMSEAVVPASQWSFLYGSLQAYKAHVQEYPGCQRFEVWAGLEDDAAMRIHCYSTWDTPEQLEAFLERGYTFERLLVDVGVPPVERSLVMEKLF*
Ga0075278_10774572	3300005893	Rice Paddy Soil	MAAAPPFVSYSTMSEAVVPASQWSFLYGSLQAYKAHVQEYPGCQRFEVWAGLEDDAAMRIHCYSTWDTPEQLEAFLERGYTFERLLVDVGVPPVERSLVMEKLF*
Ga0066696_102296691	3300006032	Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFLELGYTFERLLADLELTEVERSLSMEKLF*
Ga0066652_1011861402	3300006046	Soil	MAAAPPFVSYSSMSEAVVPASEWEYLYASLQAQKAHVQEYPGCQRFEVFAAVDDDGSMRLHCYTTWDTPEQLDVYLERGYTFERLLADVGLQPAERSLVMEKLF*
Ga0074055_106484561	3300006573	Soil	RPHRQRADLLMASPAAPPFVSYSSMSEAVVPASEWPYLYASLQAHKAHVQEYPGCQHLEAWVAVDDDGSMRIHCYTTWDTPEQLEVFLELGYTFERLLSDVGVARAERSLVMEKLF*
Ga0066658_100643492	3300006794	Soil	MAAAPPFVAYSTMSEAVAPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFVELGYTFERLLLDLELPAVDRSLVMEKLF*
Ga0066660_108209082	3300006800	Soil	MAAAPPFVSYSTMSEAVVPLEDWPHLYASLQAHKAHVQEYPGCQRFEAWVDVEETGVRVHCYTTWDTVEQLEVFVERGYTFERLLVDVGVPAAERSLVMEKLF*
Ga0066660_111566492	3300006800	Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFVELGYTFERLLSDLELPAVDRSLAMEKLF*
Ga0066710_1013808762	3300009012	Grasslands Soil	MAAPPFVSYSTLTEAVVSADEWSFLYASLQAQKAHVQEYPGCQRFEVWIDPEEAGVRVHCYTTWDTAEQLDAFVERGYTVERLLSDAGLPAAERSLVMEKVF
Ga0066710_1021390093	3300009012	Grasslands Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDDDGGMRIQCYTVWDTPEQLDAFLEIGYTFERLLTDLELTEVERSLVMEKLF
Ga0099827_113709471	3300009090	Vadose Zone Soil	MAAAPPFVSYSTMSEATVSAADWPTLYTSLQAHKAHVQEYPGCQRMEVFATVDEDGSMRLHCYTTWDTPEQLEAFLERGYTFERLLKDVGVPGVERSL
Ga0099827_116897301	3300009090	Vadose Zone Soil	MAAAPPFVAYSSMSDARVPSDEWPFVYASLQAHKAHVQEYPGCQRLEVWVAVEDDGGVRLHCYTTWDTPDELEAFLDRGYTFERMLADASSDARVERSLVMEK
Ga0066709_1017281352	3300009137	Grasslands Soil	MAAAPPYVAYSSMSEAVAPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDDDDGMRIHCYTVWDTPEQLDAFVELGYTFERLLSDLELPAVDRSLVMEKLF*
Ga0066709_1046231782	3300009137	Grasslands Soil	VVPLEDWPHLYASLQAHKAHVQEYPGCQRFEAWVDVEENGVRVHCYTTWDTVEQLEVFVERGYTFERLLVDVGVPAAERSLVMEKLF*
Ga0114129_135026462	3300009147	Populus Rhizosphere	MAAAPPFVSYSTLTEAVVPAAEWSFVYASLQAHKAHVQEYPGCQRFEVWVDVEDAAVRMHCYTTWDTPEQLEAFLERGYTVERLLADVGLRGAERSLVMEKVF*
Ga0126319_12725362	3300010147	Soil	MAAAPPFVSYATMSEAVVPSDDWPLLYASLQAHKAHVQEYPGCQRMEVYVAVDGDGSMRLHCYTTWDTPEELEVFVDRGYTFERLLADVGASGVERSLVMEKLF*
Ga0126319_12739344	3300010147	Soil	MAAAPPFVSYSTMSETVVAADDWPMLYASLQAHKAHVQEYPGCQRMEVYVAVDDEGSMRLHCYTTWDTPEQLEVFVDRGYTFERLLADVGVSPAERSLVMEKLF*
Ga0126319_15491171	3300010147	Soil	MAAAPPFASYATMSEAVVPAADWTFVYASLQAHKAHVQEYPGCQRMEVYVAVDDDGAMRLHCYTTWDTPEQLEVFLERGYTFERMVADAGVVGVERSLVMEKVF*
Ga0134082_101720021	3300010303	Grasslands Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLEAFLERGYTFERML
Ga0120152_11319132	3300012011	Permafrost	MAAAPPFVSYSTMSEATVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRIHCYTVWDTPEQLEVFLEIGYTFERLLADLDLAGAERSLVMEKLF*
Ga0137364_104255402	3300012198	Vadose Zone Soil	MAAAPPFVSYSTMSEASVPSSEWSYLYGSLQAYKAHVQEYPGCQKMELFASIDDDGAMRVHCYTVWDTPEQLEIFLEIGYTFERLLADLELQGVERSLVMEKLF*
Ga0137382_102591973	3300012200	Vadose Zone Soil	MAAAPPFVSYSTMSEATVPASEWTYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLELGYTFERLLADLELAGVERSLVMEKLF*
Ga0137382_104076882	3300012200	Vadose Zone Soil	MAAAPPFVSYSSMSDVVLSAADWPYLYSSLQAYKAHVQEYPGCQRMEAFAALEDDGSMRIHCYTVWDTPEQLDVFLEQGYTFERLLADVGIPGAERSLVMEKLF*
Ga0137382_109804232	3300012200	Vadose Zone Soil	MAAAPPYVAYSSMSEAVAPASEWPYLYASLQAYKAHVQEYPGCQRMELFASVDDDGGMRIHCYTVWDTPEQLEVFLDLGYTFERLLADL
Ga0137365_103186021	3300012201	Vadose Zone Soil	MAAAPPFVSYSTMTEAVVPAADWPSLYSSMQAQKAHVQEYPGAQRYEVFVAVEGEDVHIHCYTTWDTPEQLDIYVERGYTFERLLADVGAPAAERSLVMEKIF*
Ga0137365_104854212	3300012201	Vadose Zone Soil	MIAAPPFAAYSTMTEAVVRSAEWPYVYASLQAFKAHVQEYPGCQRLEVFVFVEDDVGIRVHCYSTWDTLDQLEAFLERGYTFERMLADTADGAVERSLVMEKLF*
Ga0137399_107324551	3300012203	Vadose Zone Soil	TVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLEIGYTFERLLADLELQGVERSLVMEKLF*
Ga0137374_100161804	3300012204	Vadose Zone Soil	MSSAAAPPFVSYSSMSEAVVPASEWPYLYASLQALKAHVQEYPGCQRMEAWVAVDDDGSMRIHCYTTWDTAEQLDVFLELGYTFDRLLSDVGLSRAERSLVMEKLF*
Ga0137376_102932972	3300012208	Vadose Zone Soil	MAAAPPFVSYSTMSEASVPSSEWSYLYGSLQAYKAHVQEYPGCQKMELFASIDDDGAMRVHCYTVWDTPEQLEIFLEIGYTFERLLADLDLAGVERSLVMEKLF*
Ga0137376_103513003	3300012208	Vadose Zone Soil	MAAAPPFVSYSTMSEATVPASEWTYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLDLGYTFERLLADLELAGVERSLVMEKLF*
Ga0137376_104732323	3300012208	Vadose Zone Soil	MAVGVAPPFVSYSSMTEAVVPASEWSYLYASLQALKAHVQEYPGCQRMEVWAALDDDGNMRLHCYTTWDTPEQLEVFLERGYTFDRLLADVGLSGIERSLTMEKLF*
Ga0137377_100604543	3300012211	Vadose Zone Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDDDGGMRIHCYTVWDTPEQLDAFVELGYTFERLLLDLELPAVDRSLVMEKLF*
Ga0137371_100402333	3300012356	Vadose Zone Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFVELGYTFERLILDLELPAVDRSLVLEKLF*
Ga0137371_100541252	3300012356	Vadose Zone Soil	MSSAAAPPSVSYSSMSEAVVPASEWPYLYASLQALKAHVQEYPGCQRMEAWVAVDDDGSMRIHCYTTWDTAEQLDVFLELGYTFDRLLSDVGLSRAERSLVMEKLF*
Ga0137360_108588822	3300012361	Vadose Zone Soil	MAAAPPFVSYSTMSEATVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLEIGYTFERLLADLELQGVERSLVMEKLF*
Ga0137398_108881113	3300012683	Vadose Zone Soil	AAPPFVSYSTMSEATVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLEIGYTFERLLADLELQGVERSLVMEKLF*
Ga0137407_108259773	3300012930	Vadose Zone Soil	MAAAPPFVSYSSMSEVVISAADWPFLYASLQAYKAHVQEYPGCQRMEAFVAVQDDGSMRVHCYTTWDTPEQLDAFIEWGYTFERLLGDVGLRHSERTLVMEKLF*
Ga0164298_104471043	3300012955	Soil	MAAAPPFVSYSTMSETTVPASEWSYLYGSLQAYKEHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLEIGYTFERLLADLELQGVERSLVMEKLF*
Ga0134110_102370572	3300012975	Grasslands Soil	MAAPPFVSYSTLTEAVVPAGEWSFLYASLQAQKAHVQEYPGCQRFEVWIDPEEAGVRVHCYTTWDTAEQLDAFVERGYTVERLLSDAGLPAAERSLVMEKVF*
Ga0120158_100860292	3300013772	Permafrost	MAAAPPFVSYSTMSEASVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRIHCYTVWDTPEQLEVFLEIGYTFERLLADLDLAGAERSLVMEKLF*
Ga0120158_103893422	3300013772	Permafrost	MAAAPPFVSYSTMSEATVPASEWSYLYGSLQAYKAHVQEYPGCQKLEAFVEPSGEDGSVHVHCYTIWDTPEQLEAFLERGYTFERMLADVAQVTPEQTRIMEKVF*
Ga0134078_101649861	3300014157	Grasslands Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLEVFLELGYTFERLLADLD
Ga0134078_104186002	3300014157	Grasslands Soil	MGVAPPFVSYSTMSEAVVPLEDWPHLYASLQAHKAHVQEYPGCQRFEAWVDVEDAGMRVHCYTTWDTVEQLEVFLERGYTFERMLADVAEIVPEETRVLEKIF*
Ga0134079_102153421	3300014166	Grasslands Soil	MAAAPPFVAYSSMSQALIPASDWAYVYASLQAHKAHVQEYPGCQRMEVWAAVDDDGSMRLHCYTTWDTPEQLDVFLERGYTFERMLADVGVAAAERTLVMEKLF*
Ga0167652_10209803	3300015164	Glacier Forefield Soil	MAAAPPFVSYSSMSEVVLSAADWPYLYSSLQAYKAHVQEYPGCQRMDAFAALEDDGSMRIHCYTVWDTPEQLEVFLERGYTFERLLVDVGIPGVERSLVMEKLF*
Ga0137412_109582811	3300015242	Vadose Zone Soil	MAAAPPFVSFSTMSEAVVTEADWPSLYASLQAHKAHVQEYPGCQRMEVFAALDDDGAMRLHCYTTWDTPEQLEAFLERGYTFERLLHDCSIAGLERSLVMEKLF*
Ga0137403_107711753	3300015264	Vadose Zone Soil	MAAAPPFVSYSSMSEVVISAADWPFLYASLQAYKAHVQEYPGCQRMEAFVAVQDDGSMRVHCYTTWDTPEQLDAFFEWGYTFERLLGDVGLRHSERTLVMEKLF*
Ga0134089_101099023	3300015358	Grasslands Soil	MSVAVAPPFVSFSSMTEAVVPASEWQYLYASLQALKAHVQEYPGCQRMEVWVAVDDDGSMRIHCYTTWDTPEQLEVYLERGYTFERLLADVGLTGVERSMTMEKLF*
Ga0184619_102463122	3300018061	Groundwater Sediment	MAAAPPFVSYSTMSEASVPSSEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEIFLEIGYTFERMLADASSDARVERSLVMEKLF
Ga0184618_100308133	3300018071	Groundwater Sediment	MAAAPPFVSYSTMSEASVPSSEWSYLYGSLQAYKAHVQEYPGCQKMELFASIDDGGAMRVHCYTVWDTPEQLEIFLEIGYTFERLLADLELQGVERSLVMEKLF
Ga0066655_102630843	3300018431	Grasslands Soil	MIAAPPFAAYSTMTEAVVPSAEWPYVYASLQAFKAHVQEYPGCQRLEVFVFVEEDVGIRIHCYSTWDTLDQLEAFLERGYTFERMLADTADGAVERSLVMEKLF
Ga0066667_103338572	3300018433	Grasslands Soil	MAAAPPYVAYSSMSEAVAPASEWPYLYASLQAYKAHVQEYPGCQRMELFASVDDDGGMRIHCYTVWDTPGQLEGFLDLGYTFERLLADLDLAGVERSLVMEKLF
Ga0066667_120759152	3300018433	Grasslands Soil	AAPPFVSYSTMSEAVVPLEDWAHLYASLQAHKAHVQEYPGCQRFEAWVDVEDAGVRIHCYTTWDTVEQLEVFVERGYTFERLLVDVGVPAAERSLVMEKLF
Ga0066669_103149763	3300018482	Grasslands Soil	MIAAPPFAAYSTMTEAVVPSAEWPYVYASLQAFKAHVQEYPGCQRLEVFVFVEDDVGIRVHCYSTWDTLDQLEAFLERGYTFERMLADTADGAVERSLVMEKLF
Ga0066669_104400802	3300018482	Grasslands Soil	MGAVQPFVVYSSCSEALVPGEDWPTLYASLQALKAHVQEYPGCQRFDAFADVLEDGVWVHVYTTWDTPDQLEVYLERGYTFERMLADVGVPAVERTLVMEKLF
Ga0137408_10711102	3300019789	Vadose Zone Soil	MAAAPPFVSYSSMSEVVISAADWPFLYASLQAYKAHVQEYPGCQRMEAFVAVQDDGSMRVHCYTTWDTPEQLDAFIEWGYTFERLLGDVGLRHSERTLVMEKLF
Ga0193751_12528382	3300019888	Soil	MAAAPPFVSYSTMSEATVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRIHCYTVWDTPEQLEVFLEIGYTFERLLADLDLAGAERSLVMEKLF
Ga0210382_104780133	3300021080	Groundwater Sediment	STMSEAVVPLEDWPHLYASLQAHKAHVQEYPGCQRFEAWVDVEDAAMRIHCYTTWDTVEQLEVFLERGYTFERLLADVGMPVAERSLVMEKLF
Ga0193719_103131931	3300021344	Soil	MAVAAAPPFVSYSTMSEAVVPASEWPFLYASLQALKAHTQEYPGCQRMEVWVAVDDDGSVRIHCYTTWDTPEQLEVYLERGYTFERGLADAADLRPERSLVME
Ga0193699_100435244	3300021363	Soil	MAAAPPFVSYATMSEAVVPSDDWPLLYASLQAHKAHVQEYPGCQRMEVYVAVDDDGSMRLHCYTTWDTPEELEVFVDRGYTFERLLADVGASGVERSLVMEKLF
Ga0193699_102128291	3300021363	Soil	ATMSEAVVASDDWPILYASLQAHKAHVQEYPGCQRMEVYVAVDDDGSMRLHCYTTWDTPEQLEVFVDRGYTFERLLADVGASEVARSLVMEKLF
Ga0193699_103192541	3300021363	Soil	MSAADWPFLYASLQAYKAHVQEYPGCQRMEAFVAVQDDGSMRVHCYTTWDTPEQLDAFVEWGYTFERLLGDVGLRHSERTLVMEKLF
Ga0207705_101502243	3300025909	Corn Rhizosphere	MAAAPPFVSYSSMSEAIVSSTDWPFLYASLQAFKAHVQEYPGCQRTEAFAALQDDGSMRIHCYTTWDTPEQLDVYLEYGYTFERLLGDVGLPSQARTLLMEKLF
Ga0207661_109644633	3300025944	Corn Rhizosphere	SSTDWPFLYASLQAFKAHVQEYPGCQRTEAFAALQDDGSMRIHCYTTWDTPEQLDVYLEYGYTFERLLGDVGLPSQARTLLMEKLF
Ga0209808_11253811	3300026523	Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFLELGYTFERLLA
Ga0209474_100339393	3300026550	Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFLELGYTFERLLADLELTEVERSLSMEKLF
Ga0209474_100905743	3300026550	Soil	MAAAPPYVAYSSMSEAVAPASEWPYLYASLQAYKAHVQEYPGCQRMELFASVDDDGGMRIHCYTVWDTPEQLEVFLDLGYTFERLLADLDLAGVERSLVMEKLF
Ga0209577_100170259	3300026552	Soil	MAAAPPFVAYSTMSEAVVPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAVDEDDGMRIHCYTVWDTPEQLDAFVELGYTFERLLSDLELPAVDRSLVMEKLF
Ga0209577_102680952	3300026552	Soil	MAAAPPFVAYSTMSEAVAPASEWPYLYASLQAYKAHVQEYPGCQKMELFAAIDDDGGMRIHCYTVWDTPEQLDAFLELGYTFERLLSDLELAGVERSLVMEKLF
Ga0209726_100129293	3300027815	Groundwater	MAAAPPFVSYATMSEAIVAIADWPVLYASLQTHKAHVQEYPGCQRLEVYVAVDDDGSMRLHCYTTWDTPEQLEVFVERGYTFERMLADVGVTGVERSLVMEKLF
Ga0307322_100918943	3300028710	Soil	AVMSAADWPFLYASLQAYKAHVQEYPGCQRMEAFVAVQDDGSMRVHCYTTWDTPEQLDAFLEWGYTFERLLGDVGLRHSERTLVMEKLF
Ga0307309_100170143	3300028714	Soil	MSAADWPFLYASLQAYKAHVQEYPGCQRMEAFVAVQDDGSMRVHCYTTWDTPEQLDAFLEWGYTFERLLGDVGLRHSERTLVMEKLF
Ga0307307_102646992	3300028718	Soil	MAAAPPFVSYSTMSEASVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFASIDDGGAMRVHCYTVWDTPEQLEIFLEIGYTFDRLLADLELQGVERSLVME
Ga0307282_103653782	3300028784	Soil	MAAAPPFVSYSTMSEASVPSSEWSYLYGSLQAYKAHVQEYPGCQKMELFASIDDGGAMRVHCYTVWDTPEQLEIFLEIGYTFDRLLADLELQGVERSLVMEKLF
Ga0307282_104419703	3300028784	Soil	AGLLMAVAAAPPFVSYSTMSEAVVPASEWPFLYASLQALKAHTQEYPGCQRMEVWVAVDDDGSVRIHCYTTWDTPEQLEVYLERGYTFERGLADAADLRPERSLVMEKIF
Ga0307503_105188171	3300028802	Soil	HRERTDLLMAAAPPFVSYATMSEAVVASDDWPMLYASLQAHKAHVQEYPGCQRMEVYVAVDDDGSMRLHCYTTWDTPEQLDVFIERGYTFERLLADVGTSGLERSLVMEKVF
Ga0307281_102439492	3300028803	Soil	MASAAAPPFVSYSSMSEAVVPASEWPYLYASLQAHKAHVQEYPGCQHMEVWVAVDDDGSMRIHCYTTWDTPEQLEVFLEIGYTFERLLSDVGLARAERSLVMEKLF
Ga0307305_103324341	3300028807	Soil	MAAAPPFVSYSSMSEAVMSAADWPFLYASLQAYKAHVQEYPGCQRMEAFVAVQDDGSMRVHCYTTWDTPEQLDAFLEWGYTFERLLGDVGLRHSERTLVMEKLF
Ga0307292_103513961	3300028811	Soil	EAVVPASEWPFLYASLQALKAHTQEYPGCQRMEVWVAVDDDGGVRIHCYTTWDTPEQLEVYLERGYTFERGLADAADMRPERSLVMEKIF
Ga0307312_107681782	3300028828	Soil	MAAAPPFVSYSTMSEATVPASEWSYLYGSLQAYKAHVQEYPGCQKMELFAAIDDDGAMRVHCYTVWDTPEQLEVFLEIGYTFERLLADLELQGVERSLVMEKLF
Ga0307308_105397501	3300028884	Soil	SSMSEAVMSAADWPFLYASLQAYKAHVQEYPGCQRMEAFVAVQDDGSMRVHCYTTWDTPEQLDAFLEWGYTFERLLGDVGLRHSERTLVMEKLF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090360

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences