Metagenome Family F090292

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090292
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	65 residues
Representative Sequence	MNERIRRFMEECFDVTVDHRGREECTADYINVQRFADLIIRECAELSTGYSGNVKLLICNHFGIEP
Number of Associated Samples	66
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.83 %
% of genes near scaffold ends (potentially truncated)	10.19 %
% of genes from short scaffolds (< 2000 bps)	70.37 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (45.370 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (38.889 % of family members)
Environment Ontology (ENVO)	Unclassified (77.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (72.222 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.23% β-sheet: 8.51% Coil/Unstructured: 54.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.144.1.6: APH phosphotransferases	d2pula_	2pul	0.58281
c.52.1.34: PA N-terminal domain	d4m5ra1	4m5r	0.58234
d.3.1.0: automated matches	d2zfya_	2zfy	0.58157
d.67.3.1: Ribosome recycling factor, RRF	d1ek8a_	1ek8	0.57951
d.2.1.7: Chitosanase	d4olta_	4olt	0.57942

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF11351	GTA_holin_3TM	26.85
PF00959	Phage_lysozyme	10.19
PF11753	DUF3310	5.56
PF04545	Sigma70_r4	1.85
PF03796	DnaB_C	0.93
PF13384	HTH_23	0.93
PF13479	AAA_24	0.93
PF00271	Helicase_C	0.93
PF13385	Laminin_G_3	0.93
PF08774	VRR_NUC	0.93
PF16510	P22_portal	0.93
PF15943	YdaS_antitoxin	0.93
PF10991	DUF2815	0.93
PF12651	RHH_3	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.93
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.63 %
Unclassified	root	N/A	45.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.37 %
cellular organisms	root	All Organisms → cellular organisms	30.56 %
Viruses	superkingdom	All Organisms → Viruses	24.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.56 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	17.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.07 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	17.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	3.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.37 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	17.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	3.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.37 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	17.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	3.70 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	1.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.37 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	17.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	3.70 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	1.85 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.93 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.37 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	3.70 %
Alishewanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alishewanella	1.85 %
Rhodospirillales bacterium 70-18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 70-18	0.93 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.37 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	3.70 %
unclassified Alishewanella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alishewanella → unclassified Alishewanella	1.85 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.93 %
Rhodospirillales bacterium 70-18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 70-18	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.37 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	3.70 %
Alishewanella sp. 34-51-39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alishewanella → unclassified Alishewanella → Alishewanella sp. 34-51-39	1.85 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.93 %
Rhodospirillales bacterium 70-18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 70-18	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10120157	Not Available	623	Open in IMG/M
3300003393\|JGI25909J50240_1117644	Not Available	524	Open in IMG/M
3300003431\|JGI25913J50563_1022160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1021	Open in IMG/M
3300005581\|Ga0049081_10039790	All Organisms → Viruses → Predicted Viral	1785	Open in IMG/M
3300005581\|Ga0049081_10074950	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1272	Open in IMG/M
3300005581\|Ga0049081_10075293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alishewanella → unclassified Alishewanella → Alishewanella sp. 34-51-39	1268	Open in IMG/M
3300005581\|Ga0049081_10121193	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	967	Open in IMG/M
3300005581\|Ga0049081_10244187	Not Available	632	Open in IMG/M
3300006641\|Ga0075471_10224907	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	971	Open in IMG/M
3300006805\|Ga0075464_10831647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	575	Open in IMG/M
3300006875\|Ga0075473_10457439	Not Available	515	Open in IMG/M
3300007559\|Ga0102828_1009004	Not Available	2015	Open in IMG/M
3300009068\|Ga0114973_10021742	Not Available	3972	Open in IMG/M
3300009068\|Ga0114973_10080980	All Organisms → Viruses → Predicted Viral	1864	Open in IMG/M
3300009068\|Ga0114973_10187428	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300009068\|Ga0114973_10222030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alishewanella → unclassified Alishewanella → Alishewanella sp. 34-51-39	1026	Open in IMG/M
3300009151\|Ga0114962_10000995	Not Available	24575	Open in IMG/M
3300009151\|Ga0114962_10004717	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10816	Open in IMG/M
3300009151\|Ga0114962_10074451	All Organisms → Viruses → Predicted Viral	2168	Open in IMG/M
3300009151\|Ga0114962_10391801	Not Available	753	Open in IMG/M
3300009154\|Ga0114963_10417426	Not Available	725	Open in IMG/M
3300009155\|Ga0114968_10124911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1550	Open in IMG/M
3300009155\|Ga0114968_10179121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1240	Open in IMG/M
3300009158\|Ga0114977_10170442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1288	Open in IMG/M
3300009161\|Ga0114966_10014543	Not Available	6141	Open in IMG/M
3300009164\|Ga0114975_10364509	Not Available	792	Open in IMG/M
3300009168\|Ga0105104_10790363	Not Available	550	Open in IMG/M
3300009180\|Ga0114979_10205798	Not Available	1190	Open in IMG/M
3300009181\|Ga0114969_10025214	All Organisms → cellular organisms → Bacteria → Proteobacteria	4145	Open in IMG/M
3300009181\|Ga0114969_10157544	All Organisms → Viruses → Predicted Viral	1422	Open in IMG/M
3300009183\|Ga0114974_10759610	Not Available	523	Open in IMG/M
3300010157\|Ga0114964_10091478	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1519	Open in IMG/M
3300010157\|Ga0114964_10112592	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1343	Open in IMG/M
3300010157\|Ga0114964_10300797	Not Available	761	Open in IMG/M
3300010157\|Ga0114964_10409906	Not Available	639	Open in IMG/M
3300010157\|Ga0114964_10591935	Not Available	521	Open in IMG/M
3300010160\|Ga0114967_10186565	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300010160\|Ga0114967_10188561	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1117	Open in IMG/M
3300010160\|Ga0114967_10340028	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	761	Open in IMG/M
3300010885\|Ga0133913_13069206	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1110	Open in IMG/M
3300011009\|Ga0129318_10012856	All Organisms → cellular organisms → Bacteria → Proteobacteria	1742	Open in IMG/M
3300011337\|Ga0153702_1363	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16114	Open in IMG/M
3300012006\|Ga0119955_1044154	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1416	Open in IMG/M
3300013372\|Ga0177922_10075262	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	505	Open in IMG/M
3300017700\|Ga0181339_1016394	Not Available	841	Open in IMG/M
3300017716\|Ga0181350_1112480	Not Available	660	Open in IMG/M
3300017777\|Ga0181357_1159355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	827	Open in IMG/M
3300017777\|Ga0181357_1231035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	649	Open in IMG/M
3300017777\|Ga0181357_1335856	Not Available	505	Open in IMG/M
3300017778\|Ga0181349_1148790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	843	Open in IMG/M
3300020048\|Ga0207193_1004487	Not Available	22765	Open in IMG/M
3300020048\|Ga0207193_1873919	Not Available	511	Open in IMG/M
3300020157\|Ga0194049_1011216	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2332	Open in IMG/M
3300020157\|Ga0194049_1142797	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	647	Open in IMG/M
3300020167\|Ga0194035_1126607	Not Available	814	Open in IMG/M
3300020205\|Ga0211731_10457438	Not Available	9436	Open in IMG/M
3300020205\|Ga0211731_10626282	Not Available	505	Open in IMG/M
3300020205\|Ga0211731_11014192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	660	Open in IMG/M
3300023184\|Ga0214919_10012671	Not Available	10335	Open in IMG/M
3300023184\|Ga0214919_10020839	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7331	Open in IMG/M
3300023184\|Ga0214919_10030868	Not Available	5589	Open in IMG/M
3300023184\|Ga0214919_10122194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2145	Open in IMG/M
3300024346\|Ga0244775_10050998	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3602	Open in IMG/M
3300024346\|Ga0244775_11435270	Not Available	530	Open in IMG/M
3300025872\|Ga0208783_10398037	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300027608\|Ga0208974_1000611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14619	Open in IMG/M
3300027608\|Ga0208974_1127390	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	661	Open in IMG/M
3300027659\|Ga0208975_1000090	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	45049	Open in IMG/M
3300027659\|Ga0208975_1007329	Not Available	3935	Open in IMG/M
3300027659\|Ga0208975_1027965	All Organisms → Viruses → Predicted Viral	1814	Open in IMG/M
3300027659\|Ga0208975_1146416	Not Available	661	Open in IMG/M
3300027710\|Ga0209599_10219095	All Organisms → Viruses	517	Open in IMG/M
3300027732\|Ga0209442_1291701	Not Available	566	Open in IMG/M
3300027734\|Ga0209087_1119658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1092	Open in IMG/M
3300027736\|Ga0209190_1064116	All Organisms → Viruses → Predicted Viral	1798	Open in IMG/M
3300027749\|Ga0209084_1000342	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	43575	Open in IMG/M
3300027749\|Ga0209084_1000968	Not Available	25494	Open in IMG/M
3300027749\|Ga0209084_1027493	Not Available	2968	Open in IMG/M
3300027749\|Ga0209084_1221947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	749	Open in IMG/M
3300027754\|Ga0209596_1032889	All Organisms → cellular organisms → Bacteria → Proteobacteria	2907	Open in IMG/M
3300027754\|Ga0209596_1049683	Not Available	2198	Open in IMG/M
3300027754\|Ga0209596_1078795	Not Available	1612	Open in IMG/M
3300027763\|Ga0209088_10171425	Not Available	945	Open in IMG/M
3300027764\|Ga0209134_10000736	Not Available	8669	Open in IMG/M
3300027764\|Ga0209134_10015137	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2389	Open in IMG/M
3300027770\|Ga0209086_10197513	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	929	Open in IMG/M
3300027777\|Ga0209829_10060266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 70-18	1964	Open in IMG/M
3300027777\|Ga0209829_10244858	Not Available	757	Open in IMG/M
3300027899\|Ga0209668_10338081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	974	Open in IMG/M
3300027972\|Ga0209079_10155298	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	784	Open in IMG/M
3300028025\|Ga0247723_1143914	Not Available	564	Open in IMG/M
3300028392\|Ga0304729_1110548	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	925	Open in IMG/M
3300031772\|Ga0315288_11271692	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	628	Open in IMG/M
3300031952\|Ga0315294_11082244	Not Available	661	Open in IMG/M
3300031952\|Ga0315294_11140276	Not Available	638	Open in IMG/M
3300034018\|Ga0334985_0771050	Not Available	511	Open in IMG/M
3300034061\|Ga0334987_0803007	Not Available	524	Open in IMG/M
3300034062\|Ga0334995_0350634	Not Available	945	Open in IMG/M
3300034066\|Ga0335019_0770036	Not Available	546	Open in IMG/M
3300034093\|Ga0335012_0016154	Not Available	4462	Open in IMG/M
3300034101\|Ga0335027_0470876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	795	Open in IMG/M
3300034104\|Ga0335031_0039640	Not Available	3419	Open in IMG/M
3300034106\|Ga0335036_0000306	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	43782	Open in IMG/M
3300034106\|Ga0335036_0000401	Not Available	38686	Open in IMG/M
3300034121\|Ga0335058_0013393	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4954	Open in IMG/M
3300034167\|Ga0335017_0217321	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1092	Open in IMG/M
3300034356\|Ga0335048_0230539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1001	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.15%
Terrestrial	Environmental → Terrestrial	1.85%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.74%
Marine	Environmental → Aquatic → Marine	7.41%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.85%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	65.74%
Lentic	Environmental → Aquatic → Freshwater → Lentic	22.22%
Coastal	Environmental → Aquatic → Marine → Coastal	4.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.85%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.93%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	61.11%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	21.30%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.63%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.93%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	38.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.81%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	11.11%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	10.19%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.63%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.70%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	1.85%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.93%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.93%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.93%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.93%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300011337	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Ilsan	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017700	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.D.D	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020157	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25m	Environmental	Open in IMG/M
3300020167	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L239-20m	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_101201572	3300003277	Freshwater Lake	MNERIRKFMQECFDVTVDHRGREECTADYINVQKFADRIVRECAELSTNYSGNVKLLICNHFGIEP*
JGI25909J50240_11176442	3300003393	Freshwater Lake	MNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFSDLIVRECAELSVNYRGNVKLLICNHFGLEP*
JGI25913J50563_10221603	3300003431	Freshwater Lake	MNERILPFMEGLFDVTVDHRGREECTADYINVQKFADRIVRECAELSTNYSGNVKLLILNHFGIEP*
Ga0049081_100397904	3300005581	Freshwater Lentic	MNERIRTFMEDCFDISIDGRGREECTADYINVQKFADRIVRECAELSVNYGGNVKLLICNHFGIEP*
Ga0049081_100749502	3300005581	Freshwater Lentic	MNERIRIFMEGYFDITVDSHGREECTADYINVQKFADLIINECAELSVGYTGNVKLLIMNHFGMEP*
Ga0049081_100752933	3300005581	Freshwater Lentic	MNERIRIFMEGCFDVTVDHRGREDFSTDYAGIERFSDLIIRECAELSTGYTGNVKLLIMNHFGMELDALAKGKK*
Ga0049081_101211931	3300005581	Freshwater Lentic	MNERVRIFMEGCFDVTVDHRGREDFSTDYAGIERFSDLIIRECAELSTGYTGNVKLLIMNHFGMELDALAKGKK*
Ga0049081_102441872	3300005581	Freshwater Lentic	MNERIRAFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSVSYPGNVKLLICNHFGVEP*
Ga0075471_102249074	3300006641	Aqueous	MNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSVGYTGNVKLLICNHFGIEP*
Ga0075464_108316471	3300006805	Aqueous	VNERIKTFINGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTGNVKLLICNHFGLEP*
Ga0075473_104574393	3300006875	Aqueous	FIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSVGYTGNVKLLICNHFGIEP*
Ga0102828_10090043	3300007559	Estuarine	MNERIKELMKGCFDVTVDHRGREECTADYANVEKFADRIIMECAELSTGYTGNVKLLIYNHFGLEP*
Ga0114973_1002174212	3300009068	Freshwater Lake	VNERIRTFINGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTGNVKLLICNHFGIEP*
Ga0114973_100809802	3300009068	Freshwater Lake	VNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTNYSGNVKLLICNHFGIEP*
Ga0114973_101874283	3300009068	Freshwater Lake	MNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTGNVKLLICNHFGIEP*
Ga0114973_102220303	3300009068	Freshwater Lake	MNERIRWFMEECFDVTVDHRGREECCADYINVQRFADLIIRECAELSAGYTGNVKLLICNHFGIEP*
Ga0114962_1000099521	3300009151	Freshwater Lake	MNERIRTFMEGYFDITVDSHGREECTADYINVQKFADLIIMECAELSTGYSGNVKLLICNHFGIEP*
Ga0114962_1000471711	3300009151	Freshwater Lake	MNERIRWFMEECFDVTVDGRGREECCADYINVEKFADLIIRECAELSTGYTGNVKLLIMNHFGMEP*
Ga0114962_100744514	3300009151	Freshwater Lake	MNERIRTFMEGYFDITVDSHGREECTADYINVQKFADLIIMECAELSTGYTGNVKLLICNHFGIEP*
Ga0114962_103918012	3300009151	Freshwater Lake	VNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSVGYTGNVKLLIMNHFGMEP*
Ga0114963_104174261	3300009154	Freshwater Lake	SNENQRTLWSNKMNERIRTFMEGYFDITVDSHGREECTADYINVQKFADLIIMECAELSTGYSGNVKLLICNHFGIEP*
Ga0114968_101249113	3300009155	Freshwater Lake	VNERIRTFINGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTGNVKMLICNHFGIEP*
Ga0114968_101791212	3300009155	Freshwater Lake	VNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIIRECAELSTGYTGNVKLLICNHFGIEP*
Ga0114977_101704422	3300009158	Freshwater Lake	VNERIRAFINGCFDSYVDHRGREDFSTDYAGIERFADLIVRECAELSTNYPGNVKLLILNHFGMEP*
Ga0114966_1001454310	3300009161	Freshwater Lake	VNERIRKFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTSNVKLLICNHFGIEP*
Ga0114975_103645093	3300009164	Freshwater Lake	MNERIRWFMEECFDVTVDGRGREECTADYINVQRFADLIIRECAELSTGYSGNVKLLICNHFGIEP*
Ga0105104_107903632	3300009168	Freshwater Sediment	MNERIRKLMDGCFDITVDHRGREECCADYINVQKFADRIVRECAELSVNYGGNVKLLILNHFGIEP*
Ga0114979_102057984	3300009180	Freshwater Lake	MNERIQKFMQECFDISFDHRGREECTADYINVQRFADLIIRECAELSTGYSGNVKLLICNHFGIEP*
Ga0114969_100252142	3300009181	Freshwater Lake	VNERIRKFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTGNVKLLICNHFGIEP*
Ga0114969_101575442	3300009181	Freshwater Lake	MNERIRTFINGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYSGNVKLLICNHFGIEP*
Ga0114974_107596102	3300009183	Freshwater Lake	MNERIRAFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYPGNVKLLICNHFGIEP*
Ga0114964_100914786	3300010157	Freshwater Lake	MHDEVRNALDSAGSYAMNERIQKFMESCFDITVDHRGREECNTDYRGIEKFADLIIRECAELSTGNVKLLICNHFGFEP*
Ga0114964_101125921	3300010157	Freshwater Lake	MEECFDVTVDGRGREECCADYINVEKFADLIIRECAELSTGYTGNVKLLIMNHFGMEP*
Ga0114964_103007972	3300010157	Freshwater Lake	MNERIRWFMEECFDISIDSRGREECCADYINVQRFADLIIRECAELSTGYSGNVKLLICNHFGIEP*
Ga0114964_104099063	3300010157	Freshwater Lake	MNERIKQFIDGCFDVTVDHRGREDFSTDYAGIERFADLIVRECAELSTDYSGNVKLLICNHFGIEP*
Ga0114964_105919352	3300010157	Freshwater Lake	MNERIRRFMEECFDVTVDHRGREECTADYINVQRFADLIIRECAELSTGYSGNVKLLICNHFGIEP*
Ga0114967_101865652	3300010160	Freshwater Lake	VNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSVGYTGNVKLLICNHFVIEP*
Ga0114967_101885611	3300010160	Freshwater Lake	RKFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTSNVKLLICNHFGIEP*
Ga0114967_103400284	3300010160	Freshwater Lake	VNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTGNVKLLICNHFGIEP*
Ga0133913_130692062	3300010885	Freshwater Lake	VNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSVGYTGNVKLLICNHFGIEP*
Ga0129318_100128563	3300011009	Freshwater To Marine Saline Gradient	MNERIRRFMEGLFDVTVDSRGREECTADYANVQKFADLIIMECAELSAGYTGNVKLLIMNHFGMEP*
Ga0153702_13639	3300011337	Freshwater	MNERIRIFMEGYFDITVDSHGREECTADYINVQKFADLIIMECAELSVGYTGNVKLLIMNHFGMEPHE*
Ga0119955_10441541	3300012006	Freshwater	VNERIRKFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSVGYTGNVKLLICNHFGIEP*
Ga0177922_100752622	3300013372	Freshwater	MNDMNERIRKLMEGLFDVTVDSRGREECTADYINVQKFADRIIMECAELSTDYPGNVKLLILNHFGMEP*
Ga0181339_10163943	3300017700	Freshwater Lake	MQECFDVTVDHRGREECTADYINVQKFADRIVRECAELSTNYSGNVKLLICNHFGIEP
Ga0181350_11124802	3300017716	Freshwater Lake	MNERIRTFMEGLFDVTVDSRGREECTADYANVQRFADLIVRECADLSTGYPGNVKLLICNHFGVEP
Ga0181357_11593551	3300017777	Freshwater Lake	MNERIRKFMQECFDVTVDHRGREECTADYINVQKFADRIVRECAELSTNYSGNVKLLILNHFGIEP
Ga0181357_12310353	3300017777	Freshwater Lake	MNERIRTFMEDCFDISIDGRGREECTADYAGIERFSDLIVRECAELSVNYGGNVKLLICNHFGIEP
Ga0181357_13358561	3300017777	Freshwater Lake	RIRKLMDGCFDVTVDSRGREECTADYANVQKFADRIIMECAELSVNYGGNVKLLICNHFGIEP
Ga0181349_11487903	3300017778	Freshwater Lake	MNERIRKFMQECFDVTVDHRGREECTADYINVQKFADRIVRECAELSVNYGGNVKLLICNHFGIEP
Ga0207193_100448725	3300020048	Freshwater Lake Sediment	MNERIRKLMDGCFDITVDHRGREECCADYINVQRFADLIVKKCAELADECYCGDTVKSLIMNHFGIEP
Ga0207193_18739192	3300020048	Freshwater Lake Sediment	MNERIKELMQECFDVTVDSRGREECTADYANVQRFADRIIMECAELSTNYPGNVKLLICNHFGIEP
Ga0194049_10112162	3300020157	Anoxic Zone Freshwater	MNERIQRFMQECFDISIDGRGREECTADYINVQRFADLIIRECAELSTGYSGNVKLLICNHFGIEP
Ga0194049_11427973	3300020157	Anoxic Zone Freshwater	VNERIRTFINGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTGNVKLLICNHFGIEP
Ga0194035_11266072	3300020167	Anoxic Zone Freshwater	MNERIRRFMEECFDVTVDHRGREECCADYINVEKFADLIIRECAELSTGYTGNVKLLILNHFGMEP
Ga0211731_104574388	3300020205	Freshwater	VNERIRIFMEGCFDVTVDSRGREECTADYINVQRFADLIIRECAELSAGYTGNVKLLIMNHFGMEP
Ga0211731_106262822	3300020205	Freshwater	MNERIRIFMEGCFDVTVDSRGREECTADYINVQKFADLIIRECAELSTGYTGNVKLLIMNHFGMEP
Ga0211731_110141922	3300020205	Freshwater	MEGCFDVTVDHRGREECTADYINVQKFADLIIRECAELSTGYTGNVKMLIMNHFGMEP
Ga0214919_1001267119	3300023184	Freshwater	MNERIRWFMEKCFDVTVDHRGREECTADYINVQRFADLIIRECAELSTNYSGNVKLLICNHFGIEP
Ga0214919_100208392	3300023184	Freshwater	MEKCFDVTVDHRGREECCADYINVEKFADLIVRECAELSTGYTGNVKLLICNHFGIEP
Ga0214919_1003086810	3300023184	Freshwater	MNERIRKFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYSGNVKLLICNHFGIEP
Ga0214919_101221946	3300023184	Freshwater	VNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTGNVKLLICNHFGIEP
Ga0244775_1005099810	3300024346	Estuarine	MNERIKELMKGCFDVTVDHRGREECTADYANVEKFADRIIMECAELSTGYTGNVKLLIYNHFGLEP
Ga0244775_114352702	3300024346	Estuarine	NGCFDVYVDHRGREDFSTDYAGIERFSDLIVRECAELSTDYPGNVKLLILNHFGLEP
Ga0208783_103980371	3300025872	Aqueous	MNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSVGYTGNVKLLICNHFGIEP
Ga0208974_100061120	3300027608	Freshwater Lentic	MNERIRIFMEGCFDVTVDHRGREDFSTDYAGIERFSDLIIRECAELSTGYTGNVKLLIMNHFGMELDALAKGKK
Ga0208974_11273903	3300027608	Freshwater Lentic	NERVRIFMEGCFDVTVDHRGREDFSTDYAGIERFSDLIIRECAELSTGYTGNVKLLIMNHFGMELDALAKGKK
Ga0208975_100009046	3300027659	Freshwater Lentic	MEGCFDVTVDHRGREDFSTDYAGIERFSDLIIRECAELSTGYTGNVKLLIMNHFGMELDALAKGKK
Ga0208975_10073296	3300027659	Freshwater Lentic	MNERIRTFMEDCFDISIDGRGREECTADYINVQKFADRIVRECAELSVNYGGNVKLLICNHFGIEP
Ga0208975_10279654	3300027659	Freshwater Lentic	MNERVRIFMEGCFDVTVDHRGREDFSTDYAGIERFSDLIIRECAELSTGYTGNVKLLIMNHFGMELDALAKGKK
Ga0208975_11464162	3300027659	Freshwater Lentic	MNERIRAFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSVSYPGNVKLLICNHFGVEP
Ga0209599_102190951	3300027710	Deep Subsurface	MNERIRIFMEGCFDLTVDHRGREECTADYINVQKFADLIIMECAELSVGYTGNVKLLIMNHFGMEPHERTN
Ga0209442_12917012	3300027732	Freshwater Lake	MNERIRKFMQECFDVTVDHRGREECTADYINVQKFADRIVRECAELSTNYSGNVKLLICNHFGIEP
Ga0209087_11196584	3300027734	Freshwater Lake	VNERIRAFINGCFDSYVDHRGREDFSTDYAGIERFADLIVRECAELSTNYPGNVKLLILNHFGMEP
Ga0209190_10641163	3300027736	Freshwater Lake	MNERIRWFMEECFDVTVDHRGREECCADYINVQRFADLIIRECAELSAGYTGNVKLLICNHFGIEP
Ga0209084_100034213	3300027749	Freshwater Lake	MNERIRWFMEECFDVTVDGRGREECCADYINVEKFADLIIRECAELSTGYTGNVKLLIMNHFGMEP
Ga0209084_10009686	3300027749	Freshwater Lake	MNERIRTFMEGYFDITVDSHGREECTADYINVQKFADLIIMECAELSTGYSGNVKLLICNHFGIEP
Ga0209084_10274935	3300027749	Freshwater Lake	MNERIRTFMEGYFDITVDSHGREECTADYINVQKFADLIIMECAELSTGYTGNVKLLICNHFGIEP
Ga0209084_12219473	3300027749	Freshwater Lake	MNERIRRFMEECFDVTVDHRGREECTADYINVQRFADLIIRECAELSTGYSGNVKLLICNHFGIEP
Ga0209596_10328895	3300027754	Freshwater Lake	VNERIRKFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTGNVKLLICNHFGIEP
Ga0209596_10496833	3300027754	Freshwater Lake	VNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFADLIIRECAELSTGYTGNVKLLICNHFGIEP
Ga0209596_10787954	3300027754	Freshwater Lake	MNERIRTFINGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYSGNVKLLICNHFGIEP
Ga0209088_101714252	3300027763	Freshwater Lake	MNERIQKFMQECFDISFDHRGREECTADYINVQRFADLIIRECAELSTGYSGNVKLLICNHFGIEP
Ga0209134_100007366	3300027764	Freshwater Lake	MNERILPFMEGLFDVTVDHRGREECTADYINVQKFADRIVRECAELSTNYSGNVKLLILNHFGIEP
Ga0209134_100151373	3300027764	Freshwater Lake	MNERIRTFIDGCFDVYVDHRGREDFSTDYAGIERFSDLIVRECAELSVNYRGNVKLLICNHFGLEP
Ga0209086_101975133	3300027770	Freshwater Lake	VNERIRKFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTGYTSNVKLLICNHFGIEP
Ga0209829_100602666	3300027777	Freshwater Lake	MNERIRWFMEECFDISIDSRGREECCADYINVQRFADLIIRECAELSTGYSGNVKLLICNHFGIEP
Ga0209829_102448583	3300027777	Freshwater Lake	MNERIRWFMEECFDVTVDGRGREECCADYINVEKFADLIIRECAELSTGYTGNV
Ga0209829_103430781	3300027777	Freshwater Lake	DSHGREECTADYINVQKFADLIIMECAELSTGYSGNVKLLICNHFGIEP
Ga0209668_103380813	3300027899	Freshwater Lake Sediment	MNERIRTFMEGLFDVTVDHRGREECCADYINVEKFADLIIRECAELSVNYGGNVKLLILNHFGMEP
Ga0209079_101552983	3300027972	Freshwater Sediment	MNERIRKLMEGLFDVTVDHRGREECTADFINVQRFSDLIVRECAELAEECYCGDTVKSLIMNHFGVEE
Ga0247723_11439141	3300028025	Deep Subsurface Sediment	DSHGREECTADFINVQKFADLIIMECAELSAGYTGNVKLLIMNHFGMEP
Ga0304729_11105481	3300028392	Freshwater Lake	NERIRWFMEECFDVTVDGRGREECCADYINVEKFADLIIRECAELSTGYTGNVKLLIMNHFGMEP
Ga0315288_112716922	3300031772	Sediment	HQATDGNMNERIRAFIDGCFDVYVDHRGREDFSTDYAGIERFSDLIVRECAELSTGCTGNVKLLILNHFGIEP
Ga0315294_110822443	3300031952	Sediment	HQATDGNMNERIRAFIDGCFDVYVDHRGREDFSTDYAGIERFADLIVRECAELSTDYPGNVKLLICNHFGLEP
Ga0315294_111402762	3300031952	Sediment	MNERIRAFIDGCFDVYVDHRGREDFSTDYAGIERFSDLIVRECAELSTGCTGNVKLLILNHFGIEP
Ga0334985_0771050_252_428	3300034018	Freshwater	MDGCFDITVDHRGREECCADYINVQRFAELVVMECAELSVNYGGNVKLLICNHFGLEP
Ga0334987_0803007_253_429	3300034061	Freshwater	MEDCFDISIDGRGREECCADYINVQRFAELVVKECAELSVNYGGNVKLLILNHFGIEP
Ga0334995_0350634_90_290	3300034062	Freshwater	MNERIKELMKGCFDVTVDHRGREECTADYANVQRFADRIIMECAELSTGYTGNVKLLICNHFGIEP
Ga0335019_0770036_156_356	3300034066	Freshwater	MNERIRKLMDGCFDVTVDHRGREECTADYINVQKFAELIVRECAELSTNYPGNVKLLICNYFGIEP
Ga0335012_0016154_557_733	3300034093	Freshwater	MDGCFDITVDHRGREECCADYINVQRFAELVVMECAELSVNYGGNVKLLICNHFGIEP
Ga0335027_0470876_19_219	3300034101	Freshwater	MNERIRKLMEGLFDVTVDSRGREECTADFINVQRFADLIVRECAELSTGYTGNVKLLICNHFGLEP
Ga0335031_0039640_1424_1624	3300034104	Freshwater	MNERIKELMKGCFDVTVDHRGREECTADYANVQRFADLIVRECAELSTGYVGNVKLLICNHFGVEP
Ga0335036_0000306_43054_43254	3300034106	Freshwater	MNERIRTFMEGLFDVTVDSRGREECCADYINVQRFADRIVRECAELSTGYTGNVKLLIMNHFGIEP
Ga0335036_0000401_22530_22736	3300034106	Freshwater	MNERIRKLMDGCFDVTVDSRGREECTADYINVEKFADRIIMECAELAEECYCGDTVKSLIMNHFGIEP
Ga0335058_0013393_3197_3373	3300034121	Freshwater	MEGLFDVTVDSRGREECTADYINVQKFADRIVRECAELSVNYGGNVKLLICNHFGLEP
Ga0335017_0217321_593_793	3300034167	Freshwater	MNERIRKFMQECFDVTVDSRGREECTADYINVQRFSDLIVRECAELSTGYPGNVKLLICNHFGIEP
Ga0335048_0230539_115_291	3300034356	Freshwater	MDGCFDVTVDHRGREECCADYINVQRFADLIVRECAELSTGYTGNVKLLICNHFGLEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090292

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences