Basic Information | |
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Family ID | F090237 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 108 |
Average Sequence Length | 49 residues |
Representative Sequence | MGTIGTFRVWDRDLGDDGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWSE |
Number of Associated Samples | 77 |
Number of Associated Scaffolds | 108 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.93 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 65 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.33 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (42.593 % of family members) |
Environment Ontology (ENVO) | Unclassified (77.778 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (86.111 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 10.26% β-sheet: 7.69% Coil/Unstructured: 82.05% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.33 |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Sediment Marine Seawater Microbial Mat Aqueous Seawater Sackhole Brine Freshwater To Marine Saline Gradient Marine Estuarine Salt Marsh Marine Seawater Pond Water Soil Macroalgal Surface |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_100581171 | 3300000101 | Marine | SLASDFMGTIGKFRVWSDDLTDTGIATASAPSTEPSLQLTFDGSSTSSFTVLDWSE* |
DelMOSum2010_100664452 | 3300000101 | Marine | FMGTIGKFRVWSDDLTDTGIATASAPSTEPSLQLTFDGSSTSSFTVLDWSE* |
DelMOSum2010_102803321 | 3300000101 | Marine | GYDYMGNIGKFRVWSQDIGDDGIAAVTAPSLEPSLSLTFDSTESSFIVEDWT* |
BBAY92_101325892 | 3300000947 | Macroalgal Surface | YMGTIGTFRVWDRDLGDDGIVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE* |
Ga0066223_10166641 | 3300004461 | Marine | GQFRMWSDDLTDTGITEATLPSTEPSLSLTFDGSENSFIVLDWSE* |
Ga0098048_11329991 | 3300006752 | Marine | WDKDLGDTGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWSE* |
Ga0098054_11127763 | 3300006789 | Marine | VWDRDLGDDGIVEATNPSLEPSLSLTFEGTGTNSFVVNNWAE* |
Ga0070749_101448491 | 3300006802 | Aqueous | IKSFRVWNQDLGDSGIVTATAPSLEPSLSLTFDGSGSSFTVLDWSE* |
Ga0070749_104671481 | 3300006802 | Aqueous | LSLGYDYMGTIRTFRVWNKDLGDTGIAEATLPSLEPSLSLTFDGTEGSFTVLNWSE* |
Ga0070749_105304822 | 3300006802 | Aqueous | RFRVWGVDLGDGGIELASAPSLEPSLSLTFDSSESSFVVDDWSA* |
Ga0070754_100543531 | 3300006810 | Aqueous | GDAGLVEATEPSLEPSLSLTFEGVGTNSFVVNDWSE* |
Ga0070754_102065361 | 3300006810 | Aqueous | YMGTVERFRVWGVDLGDGGIELASAPSLEPSLSLTFDSSESSYIVDDWSA* |
Ga0070754_102464072 | 3300006810 | Aqueous | YMGTINQFRVWSQDLGDTGIVDATEPSLEPSLSLTFDGSEGSFIVEDWT* |
Ga0070754_102717761 | 3300006810 | Aqueous | LDLAFDYMGTIKTFRIWDKDLGDTGLVAATAPSLEPSLSLSFDSTESSFIDLGWSE* |
Ga0070754_103343781 | 3300006810 | Aqueous | DKDLGDAGLVEATEPSLEPSLSLTFEGVGTNSFVVNDWSE* |
Ga0075475_104403881 | 3300006874 | Aqueous | TIGTFRVWDQDLGDDGIVTASAPSLEPSLSLTFDGSGLSFTVLDWSE* |
Ga0070750_100874591 | 3300006916 | Aqueous | MGTIGTFRVWDKDLGDDGIVTASAPSLEPSLSLTFDGSGSSFTVLDWSE* |
Ga0070750_103458471 | 3300006916 | Aqueous | GTFRVWNQDLGDDGIVTATAPSLEPSLSLTFDGSGSSFTVLDWSE* |
Ga0070746_101862411 | 3300006919 | Aqueous | TYMGTIGTFRVWDKDLGDDGIVTASAPSLEPSLSLTFDGSGSSFTVLDWSE* |
Ga0098045_10985621 | 3300006922 | Marine | DTGLVEATNPSLEPSLSLDFIGTGTTSFTVSDWSE* |
Ga0098051_10911511 | 3300006924 | Marine | SEFRVWDKDIGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWSE* |
Ga0098051_10969571 | 3300006924 | Marine | LAYDYMGTISEFRVWDKDLGDDGLVEATNPSLEPSLSLTFEGTGTNSFTVSEWSE* |
Ga0098050_10407892 | 3300006925 | Marine | STDLDLAYDYMGTISEFRIWDKDLGDAGLVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE |
Ga0098050_11052792 | 3300006925 | Marine | SDLDIALQYMGTIGTFRVWDKDLGDTGIVEATNPSLEPSLSLTFEGTGTSSFVVNDWSE* |
Ga0098046_10891191 | 3300006990 | Marine | DDGIVEATNPSLEPSLSLTFEGVGTNSFVVNNWSE* |
Ga0075460_101989202 | 3300007234 | Aqueous | SATDLDLGFDYMGTIGTFRVWDQDLGDDGIVTASAPSLEPSLSLTFDGSGLSFTVLDWSE |
Ga0075463_100953621 | 3300007236 | Aqueous | VWDKDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE* |
Ga0070753_10503771 | 3300007346 | Aqueous | LGYDYMGTINQFRVWSQDLGDAGIVDATEPSLEPSLSLTFDSTDSSFIVRDFT* |
Ga0070753_11894891 | 3300007346 | Aqueous | YNGTISTFRVWSQDLGDTGIVEATEPSLEPSLSLTFDGSESSFIVDDWT* |
Ga0070753_13309821 | 3300007346 | Aqueous | NQFRVWSQDLGDTGIVDATEPSLEPSLSLTFDGSEGSFIVEDWT* |
Ga0099849_10412101 | 3300007539 | Aqueous | FRVWDRDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWAE* |
Ga0099849_12205101 | 3300007539 | Aqueous | ISEFRVWDRDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWSQ* |
Ga0099849_13687761 | 3300007539 | Aqueous | KDITDAGLVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE* |
Ga0070751_11349712 | 3300007640 | Aqueous | LDLAPTYMGTINQFRVWSQDLGDTGIVEATEPSLEPSLSLTFDGSEGSFIVEDWT* |
Ga0075480_100867201 | 3300008012 | Aqueous | ATAYMGTINQFRVWSQDLGDTGIVDATEPSLEPSLSLTFDSTDSSFVVRDFT* |
Ga0102963_12209271 | 3300009001 | Pond Water | IKTFRVWNVDLTDSGLIAATAPSLEPSLSLSFDSTESSFTVLDWSE* |
Ga0102810_10728562 | 3300009002 | Estuarine | MGTIGKFRVWSDDLTDTGIATASAPSTEPSLQLTFDGSSTSSFTVLDWSE* |
Ga0114994_104771241 | 3300009420 | Marine | NLGYDFMGTIAQFRVWNEDLTDAGIVEATLPSTEPSLSLTFDGSETSFTVLDWSE* |
Ga0098049_10717482 | 3300010149 | Marine | MGTIGTFRVWDRDLGDDGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWSE* |
Ga0098049_11136751 | 3300010149 | Marine | KDIGDDGIVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE* |
Ga0098049_11350472 | 3300010149 | Marine | DLNFAYDFQGTIGTFRVWDKDLGDTGLVEATNPSLEPSLSLDFIGTGTTSFTVSDWSE* |
Ga0098056_11324391 | 3300010150 | Marine | AYDYMGTISEFRVWDKDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE* |
Ga0098061_11623422 | 3300010151 | Marine | DLGDDGIVEATNPSLEPSLSLTFEGTGTNSFTVSDWSE* |
Ga0129345_10570391 | 3300010297 | Freshwater To Marine Saline Gradient | MGTVERFRVWGVDLGDGGIELASAPSLEPSLSLTFDSSESSFVVDDWSA* |
Ga0129345_10988541 | 3300010297 | Freshwater To Marine Saline Gradient | MGTISEFRVWDRDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWAE* |
Ga0129345_11691891 | 3300010297 | Freshwater To Marine Saline Gradient | RDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWAE* |
Ga0129345_12033082 | 3300010297 | Freshwater To Marine Saline Gradient | DRDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWAE* |
Ga0129345_12712172 | 3300010297 | Freshwater To Marine Saline Gradient | FRVWDRDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWSQ* |
Ga0129345_13483592 | 3300010297 | Freshwater To Marine Saline Gradient | YDYMGTIKTFRVWDKDLGDTGIAEATAPSLEPSLSLSFDSTESSFVDKGWSE* |
Ga0129342_11410112 | 3300010299 | Freshwater To Marine Saline Gradient | FRVWGVDLGDGGIELASAPSLEPSLSLTFDSSESSFVVDDWSA* |
Ga0129351_10488611 | 3300010300 | Freshwater To Marine Saline Gradient | IGTFRVWDQDLGDDGIVTATAPSLEPSLSLTFDGSGSSFTVLDWSE* |
Ga0129351_10921372 | 3300010300 | Freshwater To Marine Saline Gradient | MGTIGTFRVWDRDITDAGLVEATNPSLEPSLSLTFEGTGTNSFTVSRWSE* |
Ga0129351_14036822 | 3300010300 | Freshwater To Marine Saline Gradient | RVWDRDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE* |
Ga0136656_10355031 | 3300010318 | Freshwater To Marine Saline Gradient | QTYMGTIGTFRVWDQDLGDDGIVTATAPSLEPSLSLTFDGSGSSFTVLDWSE* |
Ga0181381_10848292 | 3300017726 | Seawater | GTFRIWDKDIADTGLVEATNPSLEPSLSLTFEGVGTNSFVVNDWSE |
Ga0181433_10026091 | 3300017739 | Seawater | GDTGIVEATNPSLEPSLSLTFEGVGTNSFTVSDWSE |
Ga0181380_10149191 | 3300017782 | Seawater | IDLKLAYDYMGTIGTFRVWDKDLGDDGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWAE |
Ga0181380_10251281 | 3300017782 | Seawater | MGTISTFRVWDKDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE |
Ga0181380_11480321 | 3300017782 | Seawater | IDLKLAYDYMGTIGTFRVWDKDLGDDGIVEATNPSLEPSLSLDFVGTGTTSFTVSDWSE |
Ga0181577_101130943 | 3300017951 | Salt Marsh | YKYMGTISEFRVWDKDLGDAGIVEATNPSLEPSLSLTFESGTNSFVVNNWSE |
Ga0193999_10568842 | 3300019718 | Sediment | FRVWDKDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE |
Ga0194002_10486661 | 3300019745 | Sediment | TFRVWDKDLGDTGIVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE |
Ga0194000_10443952 | 3300019750 | Sediment | SSTDLNLAYDYMGTISEFRVWDKDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNNWS |
Ga0181602_103107092 | 3300020173 | Salt Marsh | TIKTFRMWADDIGDAGIEEATEPSLEPSLSLTFDGSSTSFTVFDWSE |
Ga0181556_12372981 | 3300020176 | Salt Marsh | GYDFMGTIGLFRVWANDIGDAGIVEATAPSLEPSLSLTFDGTGTSFTVDDWSE |
Ga0213858_105624262 | 3300021356 | Seawater | STDLGLAYDYNGTISSFRVWDRDITDDGLVEATNPSLEPSLSLTFEGTGTNSFVVNNWSE |
Ga0213859_102953181 | 3300021364 | Seawater | GTISEFRVWDKDLGDAGIVEATNPSLEPSLSLTFEGAGTTSFTVSDWSE |
Ga0213860_102521461 | 3300021368 | Seawater | DYMGTVSSFRVWDRDITDDGLVEATNPSLEPSLSLTFEGIGTNSFVVNDWSE |
Ga0213866_100006361 | 3300021425 | Seawater | GTISEFRVWDKDLGDDGLEEATNPSLEPSLSLTFEGIGTNSFVVNDWAE |
Ga0224906_12154791 | 3300022074 | Seawater | DLGDAGIVEATNPSLEPSLSLTFEGTGTSSFTVSEWSE |
Ga0212020_10056481 | 3300022167 | Aqueous | FRVWDQDLGDDGIVTATAPSLEPSLSLTFDGSGLSFTVLDWSE |
Ga0196891_10586782 | 3300022183 | Aqueous | SATDLELGQTYMGTIGTFRVWDKDLGDDGIVTASAPSLEPSLSLTFDGSGLSFTVLDWSE |
Ga0196891_10653501 | 3300022183 | Aqueous | GFDYMGTIGTFRVWNQDLGDDGIVTASAPSLEPSLSLTFDGSGLSFTVLDWSE |
Ga0196905_10397442 | 3300022198 | Aqueous | MGTIGTFRVWDQDLGDDGIVTASAPLLEPSLSLTFDGSGSSFTVLDWSE |
Ga0196905_11390471 | 3300022198 | Aqueous | DYMGTIGTFRVWDQDLGNDGIVTASAPSLEPSLSLTFDGSGLSFTVLDWSE |
Ga0196901_11105812 | 3300022200 | Aqueous | IRTFRVWSQDITDAGLVEATEPSLVPSLSLTFDGTENSFVVTDWSE |
Ga0255752_100687293 | 3300022929 | Salt Marsh | YMGTIRTFRIWDKDLGDTGIIAATAPSLEPTLSLSFDETQASYINKNWSV |
(restricted) Ga0233410_101343202 | 3300023276 | Seawater | LGYNFMGTIGEFRMWSDDLGDVGITEATLPSTEPSLSLTFDGSENSFIVLDWSE |
Ga0228662_10191431 | 3300024415 | Seawater | GTIGTFRVWDKDIADTGLVEATNPSLEPSLSLTFEGVGTNSFVVNDWSE |
Ga0208667_10190702 | 3300025070 | Marine | RVWDKDLGDTGLVEATNPSLEPSLSLTFEGVGTNSFTVSDWSE |
Ga0208298_10523991 | 3300025084 | Marine | SEFRVWDKDIGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWSE |
Ga0209645_12453452 | 3300025151 | Marine | AYDYMGTIGTFRVWDKDLGDTGIVEATNPSLEPSLSLDFIGTGTTSFTVSDWSE |
Ga0208148_11314962 | 3300025508 | Aqueous | GSDFMGTIKLFRVWADDLTDAGIEEATLPSLEPSLSLTFDGSETSFTVLDWSA |
Ga0208004_11128962 | 3300025630 | Aqueous | LGFDYMGTIGTFRVWDQDLGDDGIVTASAPSLEPSLSLTFDGSGLSFTVLDWSE |
Ga0208161_11064351 | 3300025646 | Aqueous | LGYDYMGTIGTFRVWNQDLGNDGIVTATAPSLEPSLSLIFDGSGLSFTVLDWSE |
Ga0208160_10992521 | 3300025647 | Aqueous | YDYMGTLSSFRVWDRDLGDAGIVEATNPSLEPSLSLTFEGTGTNSFVVNDWAE |
Ga0208428_12028361 | 3300025653 | Aqueous | LDLATAYMGTINQFRVWSQDLGDTGIVDATEPSLEPSLSLTFDSTDSSFVVRDFT |
Ga0208162_10448361 | 3300025674 | Aqueous | MGTIGTFRVWDKDLGDDGIVTATAPSLEPSLSLTFDGSGLSFTVLDWSE |
Ga0208162_11154302 | 3300025674 | Aqueous | YMGTISEFRVWDKDITDAGLVEATNPSLEPSLSLTFEGTGTNSFVVNDWSE |
Ga0208019_10571671 | 3300025687 | Aqueous | LGFDYNGTIRTFRVWSQDITDAGLVEATEPSLVPSLSLTFDGTENSFVVTDWSE |
Ga0208019_11063651 | 3300025687 | Aqueous | TFRVWNQDLGDDGIVTASAPSLEPSLSLTFDGSGSSFTVLDWSE |
Ga0208427_11707712 | 3300025771 | Aqueous | MGTIGTFRVWNQDLGDSGIETASAPSLEPSLSLTFDGSGLSFTVLDWSE |
Ga0208543_11340671 | 3300025810 | Aqueous | AYMGTINQFRVWSQDLGDTGIVDATEPSLEPSLSLTFDSTDSSFIVRDFT |
Ga0208785_11356311 | 3300025815 | Aqueous | AYMGTIGTFRVWDQDLGDDGIVTATAPSLEPSLSLTFDGSGLSFTVLDWSE |
Ga0208547_11287592 | 3300025828 | Aqueous | LSATDLDLATAYMGTIGTFRVWNQDLGDDGIVTATAPSLEPSLSLTFDGSGLSFTVLDWS |
Ga0208645_11065362 | 3300025853 | Aqueous | GTFRVWDQDLGDDGIVTATAPSLEPSLSLTFDGSGLSFTVLDWSE |
Ga0208644_11974731 | 3300025889 | Aqueous | AFDYMGTIKTFRMFDKDIGDTGLVSATEPSLEPSLSLSFDSTETSFIDKGWSE |
Ga0208644_12174982 | 3300025889 | Aqueous | DYMGTIRTFRIWDKDLGDTGIAAATAPSLEPTLSLSFDETQASYINKNWSV |
Ga0209929_10210651 | 3300026187 | Pond Water | LGYDFMGTIKTFRMWAEDIGDTGIEEATEPSLEPSLSLTFDGSSTSFTVFDWSE |
Ga0247599_10862451 | 3300026470 | Seawater | FRIWDKDIADTGLVEATNPSLEPSLSLTFEGVGTNSFVVNDWSE |
Ga0307488_101903031 | 3300031519 | Sackhole Brine | MGTIGEFRMWSDDLGDVGITEATLPSTEPSLSLTFDGSENSFIVLDWSE |
Ga0307380_109577551 | 3300031539 | Soil | NLTIGSRGANKYMGTIRTFRIWAQDIGDAGLVEATEPSLVPSLSLTFDGTENSFVVLDWS |
Ga0307379_102283183 | 3300031565 | Soil | GTIRTFRIWAQDIGDAGLVEATEPSLVPSLSLTFDGTENSFIVEDWSE |
Ga0307376_104927272 | 3300031578 | Soil | HIYMGTIRTFRIWAQDIGDAGLVEATEPSLVPSLSLTFDGTENSFVVLDWSE |
Ga0307377_108075572 | 3300031673 | Soil | SATDLQLGYDYMGTVKTLRMWAQDIGDAGLVEATEPSLVPSLSLTFDGTENSFIVEDWSE |
Ga0316202_101850361 | 3300032277 | Microbial Mat | LDYMGTISEFRIWDRDIGEDGIVEVTEPSYEPSLSLDFTASEDSFVVLNWSE |
Ga0348335_035875_2_136 | 3300034374 | Aqueous | NQFRVWSQDLGDTGIVDATEPSLEPSLSLTFDSTDSSFVVRDFT |
Ga0348336_161078_90_239 | 3300034375 | Aqueous | MGTIGTFRVWDQDLGDDGIVTATAPSLEPSLSLTFDGSGLSFTVLDWSE |
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