Metagenome / Metatranscriptome Family F090072

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090072
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	56 residues
Representative Sequence	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Number of Associated Samples	62
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.68 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	62.96 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (48.148 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (41.667 % of family members)
Environment Ontology (ENVO)	Unclassified (75.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (77.778 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.50% β-sheet: 0.00% Coil/Unstructured: 37.50%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13481	AAA_25	5.56
PF08401	ArdcN	2.78
PF13384	HTH_23	2.78
PF01075	Glyco_transf_9	2.78
PF04002	RadC	1.85
PF00145	DNA_methylase	0.93
PF13640	2OG-FeII_Oxy_3	0.93
PF09374	PG_binding_3	0.93
PF13578	Methyltransf_24	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	2.78
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	2.78
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	1.85
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.85 %
Unclassified	root	N/A	48.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
cellular organisms	root	All Organisms → cellular organisms	44.44 %
Viruses	superkingdom	All Organisms → Viruses	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	24.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	24.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.85 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	24.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.85 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	24.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.78 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.85 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.93 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	24.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.85 %
Halieaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae	0.93 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	0.93 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.93 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.93 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.93 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.93 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	24.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.85 %
Halioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Halioglobus	0.93 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.93 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	0.93 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.93 %
Thermoactinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae	0.93 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.93 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	24.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1.85 %
Desmospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Desmospora	0.93 %
unclassified Halioglobus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Halioglobus → unclassified Halioglobus	0.93 %
Duganella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella	0.93 %
Porphyromonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae	0.93 %
Smithella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella	0.93 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	0.93 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	24.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	1.85 %
Desmospora activa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Desmospora → Desmospora activa	0.93 %
Halioglobus sp. HI00S01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Halioglobus → unclassified Halioglobus → Halioglobus sp. HI00S01	0.93 %
unclassified Smithella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella	0.93 %
unclassified Duganella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → unclassified Duganella	0.93 %
unclassified Porphyromonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae	0.93 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	0.93 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	24.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Archangium gephyra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	1.85 %
Desmospora activa DSM 45169	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Desmospora → Desmospora activa → Desmospora activa DSM 45169	0.93 %
Duganella sp. Root1480D1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → unclassified Duganella → Duganella sp. Root1480D1	0.93 %
Porphyromonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium	0.93 %
Smithella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	0.93 %
Halioglobus sp. HI00S01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Halioglobus → unclassified Halioglobus → Halioglobus sp. HI00S01	0.93 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	0.93 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10132038	Not Available	588	Open in IMG/M
3300003394\|JGI25907J50239_1091426	Not Available	595	Open in IMG/M
3300003394\|JGI25907J50239_1095076	Not Available	582	Open in IMG/M
3300003490\|JGI25926J51410_1039680	Not Available	847	Open in IMG/M
3300004448\|Ga0065861_1018515	All Organisms → cellular organisms → Bacteria	4159	Open in IMG/M
3300004790\|Ga0007758_10009727	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	897	Open in IMG/M
3300004836\|Ga0007759_11591073	All Organisms → Viruses → Predicted Viral	1047	Open in IMG/M
3300005581\|Ga0049081_10012481	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	3206	Open in IMG/M
3300005581\|Ga0049081_10055668	All Organisms → Viruses → Predicted Viral	1494	Open in IMG/M
3300005581\|Ga0049081_10237276	Not Available	643	Open in IMG/M
3300005582\|Ga0049080_10216798	Not Available	630	Open in IMG/M
3300005940\|Ga0073913_10002769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	2335	Open in IMG/M
3300006805\|Ga0075464_10014864	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3925	Open in IMG/M
3300006805\|Ga0075464_10032410	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2797	Open in IMG/M
3300006805\|Ga0075464_10046426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	2383	Open in IMG/M
3300006805\|Ga0075464_10068292	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1998	Open in IMG/M
3300006805\|Ga0075464_10805565	Not Available	584	Open in IMG/M
3300006917\|Ga0075472_10152547	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1135	Open in IMG/M
3300007734\|Ga0104986_1532	Not Available	16758	Open in IMG/M
3300008450\|Ga0114880_1041053	Not Available	2008	Open in IMG/M
3300008450\|Ga0114880_1055112	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1664	Open in IMG/M
3300009068\|Ga0114973_10026989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	3505	Open in IMG/M
3300009152\|Ga0114980_10040009	Not Available	2874	Open in IMG/M
3300009154\|Ga0114963_10000225	All Organisms → cellular organisms → Bacteria	37084	Open in IMG/M
3300009154\|Ga0114963_10365376	Not Available	789	Open in IMG/M
3300009154\|Ga0114963_10597644	Not Available	578	Open in IMG/M
3300009155\|Ga0114968_10007015	All Organisms → cellular organisms → Bacteria	8269	Open in IMG/M
3300009180\|Ga0114979_10195268	Not Available	1228	Open in IMG/M
3300009180\|Ga0114979_10819162	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	521	Open in IMG/M
3300009181\|Ga0114969_10304303	Not Available	939	Open in IMG/M
3300010885\|Ga0133913_10811348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Desmospora → Desmospora activa → Desmospora activa DSM 45169	2437	Open in IMG/M
3300010885\|Ga0133913_10977851	All Organisms → Viruses → Predicted Viral	2191	Open in IMG/M
3300011335\|Ga0153698_1822	All Organisms → cellular organisms → Bacteria	11413	Open in IMG/M
3300013372\|Ga0177922_10800772	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1135	Open in IMG/M
3300014819\|Ga0119954_1036148	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	900	Open in IMG/M
3300017701\|Ga0181364_1034740	Not Available	811	Open in IMG/M
3300017723\|Ga0181362_1052612	Not Available	845	Open in IMG/M
3300017723\|Ga0181362_1066684	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	734	Open in IMG/M
3300017736\|Ga0181365_1031947	All Organisms → Viruses → Predicted Viral	1328	Open in IMG/M
3300017761\|Ga0181356_1074130	Not Available	1138	Open in IMG/M
3300017761\|Ga0181356_1103417	Not Available	925	Open in IMG/M
3300017761\|Ga0181356_1129086	Not Available	800	Open in IMG/M
3300017761\|Ga0181356_1164967	Not Available	678	Open in IMG/M
3300017774\|Ga0181358_1226981	Not Available	598	Open in IMG/M
3300017777\|Ga0181357_1262852	Not Available	596	Open in IMG/M
3300017777\|Ga0181357_1298715	Not Available	547	Open in IMG/M
3300017778\|Ga0181349_1215297	Not Available	657	Open in IMG/M
3300017784\|Ga0181348_1040115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1944	Open in IMG/M
3300017784\|Ga0181348_1293031	Not Available	547	Open in IMG/M
3300017785\|Ga0181355_1135894	Not Available	998	Open in IMG/M
3300018790\|Ga0187842_1120084	Not Available	790	Open in IMG/M
3300019784\|Ga0181359_1001241	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	6680	Open in IMG/M
3300019784\|Ga0181359_1004120	Not Available	4572	Open in IMG/M
3300019784\|Ga0181359_1006931	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3821	Open in IMG/M
3300019784\|Ga0181359_1025034	All Organisms → Viruses → Predicted Viral	2280	Open in IMG/M
3300019784\|Ga0181359_1059597	Not Available	1462	Open in IMG/M
3300019784\|Ga0181359_1064811	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1392	Open in IMG/M
3300019784\|Ga0181359_1066554	All Organisms → Viruses → Predicted Viral	1370	Open in IMG/M
3300019784\|Ga0181359_1068033	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1352	Open in IMG/M
3300019784\|Ga0181359_1069448	Not Available	1337	Open in IMG/M
3300019784\|Ga0181359_1081725	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1210	Open in IMG/M
3300019784\|Ga0181359_1115417	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	967	Open in IMG/M
3300019784\|Ga0181359_1156185	Not Available	777	Open in IMG/M
3300019784\|Ga0181359_1198456	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	648	Open in IMG/M
3300019784\|Ga0181359_1221924	Not Available	593	Open in IMG/M
3300021962\|Ga0222713_10033684	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	4092	Open in IMG/M
3300022179\|Ga0181353_1005202	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3052	Open in IMG/M
3300022190\|Ga0181354_1108686	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	898	Open in IMG/M
3300022190\|Ga0181354_1170991	Not Available	667	Open in IMG/M
3300022190\|Ga0181354_1180689	Not Available	641	Open in IMG/M
3300022752\|Ga0214917_10009327	All Organisms → cellular organisms → Bacteria → Proteobacteria	9429	Open in IMG/M
3300022752\|Ga0214917_10019725	All Organisms → cellular organisms → Bacteria	5586	Open in IMG/M
3300022752\|Ga0214917_10030744	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	4037	Open in IMG/M
3300022752\|Ga0214917_10047067	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium	2968	Open in IMG/M
3300022752\|Ga0214917_10139638	Not Available	1305	Open in IMG/M
3300022752\|Ga0214917_10317889	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	682	Open in IMG/M
3300023174\|Ga0214921_10028317	Not Available	5601	Open in IMG/M
3300023174\|Ga0214921_10162091	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1487	Open in IMG/M
3300023179\|Ga0214923_10119811	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1720	Open in IMG/M
3300023179\|Ga0214923_10267408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → unclassified Duganella → Duganella sp. Root1480D1	951	Open in IMG/M
3300023184\|Ga0214919_10050113	All Organisms → cellular organisms → Bacteria	4007	Open in IMG/M
3300025896\|Ga0208916_10000529	All Organisms → cellular organisms → Bacteria	17758	Open in IMG/M
3300025896\|Ga0208916_10004145	Not Available	5741	Open in IMG/M
3300025896\|Ga0208916_10025688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	2348	Open in IMG/M
3300027563\|Ga0209552_1018723	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2084	Open in IMG/M
3300027644\|Ga0209356_1155662	Not Available	636	Open in IMG/M
3300027659\|Ga0208975_1002109	Not Available	8015	Open in IMG/M
3300027720\|Ga0209617_10028034	Not Available	2446	Open in IMG/M
3300027736\|Ga0209190_1014612	All Organisms → cellular organisms → Bacteria	4545	Open in IMG/M
3300027741\|Ga0209085_1000297	All Organisms → cellular organisms → Bacteria	37217	Open in IMG/M
3300027763\|Ga0209088_10001159	All Organisms → cellular organisms → Bacteria	17260	Open in IMG/M
3300027785\|Ga0209246_10226958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Halioglobus → unclassified Halioglobus → Halioglobus sp. HI00S01	726	Open in IMG/M
3300027785\|Ga0209246_10299222	Not Available	618	Open in IMG/M
3300027974\|Ga0209299_1048904	Not Available	1765	Open in IMG/M
3300031707\|Ga0315291_10508064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1116	Open in IMG/M
3300031707\|Ga0315291_11154681	Not Available	637	Open in IMG/M
3300031746\|Ga0315293_10646473	Not Available	794	Open in IMG/M
3300031952\|Ga0315294_11381385	Not Available	558	Open in IMG/M
3300032053\|Ga0315284_11869830	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	615	Open in IMG/M
3300032053\|Ga0315284_12091823	Not Available	569	Open in IMG/M
3300032092\|Ga0315905_10000747	Not Available	35449	Open in IMG/M
3300032143\|Ga0315292_10751305	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	819	Open in IMG/M
3300032143\|Ga0315292_10923996	Not Available	727	Open in IMG/M
3300032173\|Ga0315268_12420996	Not Available	539	Open in IMG/M
3300033981\|Ga0334982_0001147	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16599	Open in IMG/M
3300034355\|Ga0335039_0593736	Not Available	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.07%
Terrestrial	Environmental → Terrestrial	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	88.89%
Marine	Environmental → Aquatic → Marine	10.19%
Soil	Environmental → Terrestrial → Soil	0.93%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	47.22%
Lake	Environmental → Aquatic → Freshwater → Lake	39.81%
Coastal	Environmental → Aquatic → Marine → Coastal	9.26%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	46.30%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	31.48%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.26%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.33%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	41.67%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	13.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.04%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	8.33%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.33%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.63%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.70%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.85%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.93%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.93%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.93%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004790	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004836	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007734	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Jan	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011335	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014819	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011A	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300018790	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_41	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027720	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_101320381	3300003277	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQQTEAQASKR*
JGI25907J50239_10914261	3300003394	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYWAKYRERQTEAQASKR
JGI25907J50239_10950761	3300003394	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR*
JGI25926J51410_10396802	3300003490	Freshwater Lake	MTEDQIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQAPKR*
Ga0065861_10185157	3300004448	Marine	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYQERQTEAQASKR*
Ga0007758_100097271	3300004790	Freshwater Lake	EIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR*
Ga0007759_115910731	3300004836	Freshwater Lake	DEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR*
Ga0070374_106796631	3300005517	Freshwater Lake	MDKEKIIREYFATIGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR*
Ga0049081_100124813	3300005581	Freshwater Lentic	MTEDQIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR*
Ga0049081_100556683	3300005581	Freshwater Lentic	MDEQQIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERKQAEGQPPKPAT*
Ga0049081_102372762	3300005581	Freshwater Lentic	MTEDEIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR*
Ga0049080_102167982	3300005582	Freshwater Lentic	MTEDEIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERKQAEGRPPRPAT*
Ga0073913_100027695	3300005940	Sand	MTEDQIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR*
Ga0075464_100148643	3300006805	Aqueous	MTEDQIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASRR*
Ga0075464_100324105	3300006805	Aqueous	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQASKR*
Ga0075464_100464262	3300006805	Aqueous	MTEDEIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQASKR*
Ga0075464_100682925	3300006805	Aqueous	MTEEEIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR*
Ga0075464_108055652	3300006805	Aqueous	MTEDQIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR*
Ga0075472_101525472	3300006917	Aqueous	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR*
Ga0104986_153213	3300007734	Freshwater	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQASKR*
Ga0114880_10410531	3300008450	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERKQTEAQASKR*
Ga0114880_10551123	3300008450	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR*
Ga0114973_100269891	3300009068	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQSPKR*
Ga0114980_100400091	3300009152	Freshwater Lake	MTEEEIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERKQTEAQASKR*
Ga0114963_1000022541	3300009154	Freshwater Lake	MDEQQIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTESQASKR*
Ga0114963_103653761	3300009154	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKMRPKEHYQKAVGIRWAKYRERQQTEAQPPKR*
Ga0114963_105976442	3300009154	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYLERKQTEAQPP
Ga0114968_100070158	3300009155	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQQTEAQPPKR*
Ga0114979_101952683	3300009180	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERKQTEAQASKR*
Ga0114979_108191621	3300009180	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERKQSEGQPPKPAT*
Ga0114969_103043031	3300009181	Freshwater Lake	MTKDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERKQTEAQPPKTVA*
Ga0133913_108113482	3300010885	Freshwater Lake	MTEDEIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERKQTEAQASKR*
Ga0133913_109778516	3300010885	Freshwater Lake	MDEQQIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWARYRERQQTEAQPPKTEA*
Ga0153698_18228	3300011335	Freshwater	VDEIMGFEMNEDEIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR*
Ga0177922_108007721	3300013372	Freshwater	MTEDEIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR*
Ga0119954_10361482	3300014819	Freshwater	AYRNMTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Ga0181364_10347404	3300017701	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPRERYQRAGGSRWAKGRERLTEAQASKR
Ga0181362_10526121	3300017723	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRE
Ga0181362_10666841	3300017723	Freshwater Lake	EDKNMTEDQIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQTPKR
Ga0181365_10319472	3300017736	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQQTEAQSIRVAKKRKRSL
Ga0181356_10741302	3300017761	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKGRPREHYQKAVGIRWAKYRERQQTEAQSIRVAKKRKRSL
Ga0181356_11034173	3300017761	Freshwater Lake	MDKEKIIREYFATIGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTE
Ga0181356_11290863	3300017761	Freshwater Lake	MDKNQIIKEYFASIGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Ga0181356_11649671	3300017761	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQSPKR
Ga0181358_12269812	3300017774	Freshwater Lake	MTEEKIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASK
Ga0181357_12628523	3300017777	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQ
Ga0181357_12987151	3300017777	Freshwater Lake	MTEDEIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQQTEAQPPKR
Ga0181349_12152972	3300017778	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRER
Ga0181348_10401153	3300017784	Freshwater Lake	MDKEKIIREYFATIGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAEASKR
Ga0181348_12930312	3300017784	Freshwater Lake	MTEDQIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEA
Ga0181355_11358942	3300017785	Freshwater Lake	MTEDEIIKVYLSRLGKKGGSVKGPQKVRPREHYQNAVGIRWAKYRERQTEAQSPKR
Ga0187842_11200841	3300018790	Freshwater	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASK
Ga0181359_10012418	3300019784	Freshwater Lake	MDEQQIIKAYLSRLGKKGGSVRGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQPPKR
Ga0181359_10041203	3300019784	Freshwater Lake	MTEDQIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQTPKR
Ga0181359_10069317	3300019784	Freshwater Lake	MTEDQIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Ga0181359_10250341	3300019784	Freshwater Lake	MTEDQIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQAPKR
Ga0181359_10595972	3300019784	Freshwater Lake	MNEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQQTEAQASKR
Ga0181359_10648112	3300019784	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERKQTEAQASKR
Ga0181359_10665542	3300019784	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKFRRERQTEAQASKR
Ga0181359_10680334	3300019784	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Ga0181359_10694483	3300019784	Freshwater Lake	MTEEEIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKRKRSLSRER
Ga0181359_10817252	3300019784	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR
Ga0181359_11154172	3300019784	Freshwater Lake	MTEDQIIKAYLSRLGRNGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Ga0181359_11561853	3300019784	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQL
Ga0181359_11984561	3300019784	Freshwater Lake	GQHKNMTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQQTEAQSIRVAKKRKRSL
Ga0181359_12219242	3300019784	Freshwater Lake	KNMTEEEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR
Ga0222713_100336843	3300021962	Estuarine Water	MTKEQIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERKQTEGQPPKTEA
Ga0181353_10052024	3300022179	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Ga0181354_11086861	3300022190	Freshwater Lake	MTENEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTVAQASKR
Ga0181354_11709911	3300022190	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASN
Ga0181354_11806891	3300022190	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQAS
Ga0214917_1000932711	3300022752	Freshwater	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQPPKR
Ga0214917_100197255	3300022752	Freshwater	MGFEMNEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR
Ga0214917_100307448	3300022752	Freshwater	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPKKHYQKAVGIRWAKYRERQAEAQPPKR
Ga0214917_100470677	3300022752	Freshwater	MTENEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQQTEAQAAKR
Ga0214917_101396382	3300022752	Freshwater	MQNMTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERKQTEAQAAKR
Ga0214917_103178891	3300022752	Freshwater	MTENEIIKAYFSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQQTEAQATKR
Ga0214921_100283176	3300023174	Freshwater	MTEDEIIKAYLSRLGKKGGSAKGPQKVRPKEHYQKAVGIRWAKHRERQQTEAQPPKR
Ga0214921_101620912	3300023174	Freshwater	VDEVMGFEMNEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR
Ga0214923_101198113	3300023179	Freshwater	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQQTEAQPPKR
Ga0214923_102674082	3300023179	Freshwater	LIYNGNAAYKEHTNMTENEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQQTEAQASKR
Ga0214919_100501134	3300023184	Freshwater	MTENEIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERKQTEAQASKR
Ga0208916_1000052930	3300025896	Aqueous	MGFKMNEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVNIRWAKYRERQTEAQASKR
Ga0208916_100041459	3300025896	Aqueous	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQASKR
Ga0208916_100256882	3300025896	Aqueous	MTEDEIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQASKR
Ga0209552_10187236	3300027563	Freshwater Lake	MTEEEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR
Ga0209356_11556621	3300027644	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEARASKR
Ga0208975_100210913	3300027659	Freshwater Lentic	MTEDQIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR
Ga0209617_100280342	3300027720	Freshwater And Sediment	MTEDEIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERKQTEAQPPKTEA
Ga0209190_10146128	3300027736	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQSPKR
Ga0209085_100029740	3300027741	Freshwater Lake	MDEQQIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTESQASKR
Ga0209088_100011598	3300027763	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRTKEHYQKAVGIRWAKYRERKQTEAQASKR
Ga0209246_102269581	3300027785	Freshwater Lake	MTEEKIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQASKR
Ga0209246_102992221	3300027785	Freshwater Lake	MTEEEIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEA
Ga0209550_107024501	3300027892	Freshwater Lake	MDKEKIIREYFATIGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQTPKR
Ga0209299_10489041	3300027974	Freshwater Lake	MTEDEIIKAYLSRLGKKGGSVKGPQKVRTKEHYQKAVGIRWAKYRERKQTEAQASK
Ga0315291_105080643	3300031707	Sediment	MTENEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Ga0315291_111546811	3300031707	Sediment	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQ
Ga0315293_106464733	3300031746	Sediment	MTEEEIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKRKPSLLRER
Ga0315294_113813851	3300031952	Sediment	MTEEEIIKAYLSRLGKKGGSVSGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Ga0315284_118698301	3300032053	Sediment	AYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Ga0315284_120918233	3300032053	Sediment	MTENEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQ
Ga0315905_1000074729	3300032092	Freshwater	MTEDEIIKAYLSRLGRKGGSVKGPQKVRPREHYQKAVNIRWAKYRERQQTEAQPPKR
Ga0315292_107513052	3300032143	Sediment	YLSRLGRKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQASKR
Ga0315292_109239962	3300032143	Sediment	MTENEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTE
Ga0315268_124209961	3300032173	Sediment	DEIIKAYLSRLGKKGGSVKGPQKVRPREHYQKAVGIRWAKYRERQTEAQTSKR
Ga0334982_0001147_12478_12660	3300033981	Freshwater	MGFKMTEDEIIKAYLSRLGRKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQTEAQTPKR
Ga0335039_0593736_1_162	3300034355	Freshwater	MTEDEIIKAYLSRLGKKGGSVKGPQKVRPKEHYQKAVGIRWAKYRERQQTEAQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090072

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences