Metagenome Family F089963

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089963
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	117 residues
Representative Sequence	IWSGYMRLGSRDLERFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQTLEQIEATKG
Number of Associated Samples	100
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.77 %
% of genes near scaffold ends (potentially truncated)	87.96 %
% of genes from short scaffolds (< 2000 bps)	82.41 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.296 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (28.704 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (28.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.90% β-sheet: 0.00% Coil/Unstructured: 18.10%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00501	AMP-binding	47.22
PF13487	HD_5	19.44
PF13193	AMP-binding_C	4.63
PF00990	GGDEF	1.85
PF12710	HAD	0.93
PF01206	TusA	0.93
PF00512	HisKA	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0425	Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	87.96 %
Unclassified	root	N/A	3.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	87.96 %
Unclassified	root	N/A	3.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	87.96 %
Unclassified	root	N/A	3.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	82.41 %
Unclassified	root	N/A	3.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	82.41 %
Unclassified	root	N/A	3.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10744389	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300002124\|C687J26631_10108954	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	937	Open in IMG/M
3300003152\|Ga0052254_1007382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300004020\|Ga0055440_10108251	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300004024\|Ga0055436_10194358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	633	Open in IMG/M
3300004025\|Ga0055433_10048698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	854	Open in IMG/M
3300005176\|Ga0066679_10386463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	916	Open in IMG/M
3300005406\|Ga0070703_10292441	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	676	Open in IMG/M
3300005445\|Ga0070708_100027821	All Organisms → cellular organisms → Bacteria	4856	Open in IMG/M
3300005445\|Ga0070708_101556338	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300005450\|Ga0066682_10410939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	866	Open in IMG/M
3300005468\|Ga0070707_101911374	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	561	Open in IMG/M
3300005536\|Ga0070697_100291371	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1402	Open in IMG/M
3300005546\|Ga0070696_101430370	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300005553\|Ga0066695_10245680	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1129	Open in IMG/M
3300005575\|Ga0066702_10806295	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300005829\|Ga0074479_10773362	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300005833\|Ga0074472_11508565	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300005842\|Ga0068858_100963814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	835	Open in IMG/M
3300006904\|Ga0075424_102830615	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300007258\|Ga0099793_10502856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	602	Open in IMG/M
3300009088\|Ga0099830_11468902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300009090\|Ga0099827_10046148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3253	Open in IMG/M
3300009101\|Ga0105247_11478571	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300009147\|Ga0114129_12511502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300009792\|Ga0126374_10046888	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2163	Open in IMG/M
3300010043\|Ga0126380_10031415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2688	Open in IMG/M
3300010043\|Ga0126380_10557655	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	893	Open in IMG/M
3300010047\|Ga0126382_11034956	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	722	Open in IMG/M
3300010358\|Ga0126370_11169178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	713	Open in IMG/M
3300010359\|Ga0126376_12283627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300010360\|Ga0126372_10573283	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1077	Open in IMG/M
3300010362\|Ga0126377_12744856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300010366\|Ga0126379_10112571	All Organisms → cellular organisms → Bacteria	2451	Open in IMG/M
3300010366\|Ga0126379_10926934	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	974	Open in IMG/M
3300010391\|Ga0136847_11654795	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300011414\|Ga0137442_1055887	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300011419\|Ga0137446_1093829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	709	Open in IMG/M
3300011444\|Ga0137463_1366401	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300012189\|Ga0137388_11965501	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300012201\|Ga0137365_10576803	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	825	Open in IMG/M
3300012208\|Ga0137376_10773631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	827	Open in IMG/M
3300012211\|Ga0137377_10031826	All Organisms → cellular organisms → Bacteria	4787	Open in IMG/M
3300012226\|Ga0137447_1033854	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	860	Open in IMG/M
3300012356\|Ga0137371_11026415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	624	Open in IMG/M
3300012358\|Ga0137368_10161803	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1639	Open in IMG/M
3300012359\|Ga0137385_10672237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	866	Open in IMG/M
3300012363\|Ga0137390_11376551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	651	Open in IMG/M
3300012363\|Ga0137390_11733638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300012685\|Ga0137397_10165413	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1641	Open in IMG/M
3300012922\|Ga0137394_10257260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1493	Open in IMG/M
3300012948\|Ga0126375_10062450	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2047	Open in IMG/M
3300012948\|Ga0126375_10842699	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	730	Open in IMG/M
3300012975\|Ga0134110_10178019	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	886	Open in IMG/M
3300012976\|Ga0134076_10432145	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300014269\|Ga0075302_1091923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	672	Open in IMG/M
3300014881\|Ga0180094_1101724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300014883\|Ga0180086_1131682	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	650	Open in IMG/M
3300015256\|Ga0180073_1126839	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300015371\|Ga0132258_10057472	All Organisms → cellular organisms → Bacteria	8942	Open in IMG/M
3300018074\|Ga0184640_10198670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	905	Open in IMG/M
3300018084\|Ga0184629_10312949	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	827	Open in IMG/M
3300018482\|Ga0066669_10280470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1338	Open in IMG/M
3300021081\|Ga0210379_10401366	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	605	Open in IMG/M
3300021437\|Ga0213917_1043790	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	522	Open in IMG/M
3300025119\|Ga0209126_1153345	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300025146\|Ga0209322_10169037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	958	Open in IMG/M
3300025318\|Ga0209519_10443153	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	736	Open in IMG/M
3300025326\|Ga0209342_11341067	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300025569\|Ga0210073_1067911	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	755	Open in IMG/M
3300025979\|Ga0210078_1037751	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	655	Open in IMG/M
3300026318\|Ga0209471_1154068	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	946	Open in IMG/M
3300026326\|Ga0209801_1029079	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2630	Open in IMG/M
3300026328\|Ga0209802_1288031	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300026532\|Ga0209160_1051165	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300026538\|Ga0209056_10147412	All Organisms → cellular organisms → Bacteria → Proteobacteria	1809	Open in IMG/M
3300027643\|Ga0209076_1180614	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300027645\|Ga0209117_1132746	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	659	Open in IMG/M
3300027862\|Ga0209701_10237148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1072	Open in IMG/M
3300027862\|Ga0209701_10474936	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	684	Open in IMG/M
3300027882\|Ga0209590_10108018	All Organisms → cellular organisms → Bacteria → Proteobacteria	1673	Open in IMG/M
3300028047\|Ga0209526_10553124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	743	Open in IMG/M
3300031720\|Ga0307469_11727789	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300031736\|Ga0318501_10018554	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2876	Open in IMG/M
3300031765\|Ga0318554_10687694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	574	Open in IMG/M
3300031798\|Ga0318523_10188845	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1028	Open in IMG/M
3300031820\|Ga0307473_10589581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	765	Open in IMG/M
3300031832\|Ga0318499_10008880	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3195	Open in IMG/M
3300031845\|Ga0318511_10015916	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2664	Open in IMG/M
3300031873\|Ga0315297_10338723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1258	Open in IMG/M
3300031965\|Ga0326597_10510801	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1306	Open in IMG/M
3300031997\|Ga0315278_10575594	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1154	Open in IMG/M
3300031997\|Ga0315278_12255254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300032055\|Ga0318575_10192983	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1021	Open in IMG/M
3300032180\|Ga0307471_103421074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	562	Open in IMG/M
3300032205\|Ga0307472_102640644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300032397\|Ga0315287_12725427	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300032401\|Ga0315275_10823654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1028	Open in IMG/M
3300032829\|Ga0335070_10019044	All Organisms → cellular organisms → Bacteria → Proteobacteria	7952	Open in IMG/M
3300033433\|Ga0326726_10275615	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1572	Open in IMG/M
3300033813\|Ga0364928_0118851	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	633	Open in IMG/M
3300034125\|Ga0370484_0238352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300034164\|Ga0364940_0248653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300034178\|Ga0364934_0428118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.37%
Host-Associated	Host-Associated	4.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.22%
Aquatic	Environmental → Aquatic	23.15%
Plants	Host-Associated → Plants	4.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.52%
Sediment	Environmental → Aquatic → Sediment	10.19%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Marine	Environmental → Aquatic → Marine	4.63%
Floodplain	Environmental → Terrestrial → Floodplain	2.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.85%
Peat	Environmental → Terrestrial → Peat	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.63%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.19%
Lake	Environmental → Aquatic → Freshwater → Lake	5.56%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Creek	Environmental → Aquatic → Freshwater → Creek	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.19%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.56%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.26%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.63%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.78%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021437	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 1-17 MG	Environmental	Open in IMG/M
3300025119	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_1 (SPAdes)	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025979	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_107443892	3300001593	Forest Soil	GRRDIVAFELEAALRPLFRALHLKDLDLGLERKTRELLARTIERISDGAGERIERLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAHAFGRARQMLEQIEAKKG*
C687J26631_101089542	3300002124	Soil	MRLGRRDIVGFELEAALRPLFRALHLRDLDLGLERRTRELLARTIERISDGAGETIDRLLXAGDRDAAMQRWQEXRGIIQKARDQGLSHEELAHAFGRARQXLEQIEATKG*
Ga0052254_10073821	3300003152	Sediment	WNGYMRLARRQIEGFELESAVRPLLRALHLRDLDMTLERKTRDLLARTIERIADRAGETITRLLKGGDRDGAMQRWQDVRGLIQKARDQGLSHEELAQAFSRARQMLEQIEAVKR*
Ga0055440_101082512	3300004020	Natural And Restored Wetlands	LVATSVESIAPGRWHAVNRRIWSGYMRLARRQIEGFDLEAAVRPLLRALQVRDLDLGLERRTRELLSRTIERIADGAGETIARLLKAGDREAAMQRWQDVRGLIQKARDQGMSHEELGQAFGRARQMLEQIEAVKR*
Ga0055436_101943582	3300004024	Natural And Restored Wetlands	IVAFELEAALWPLFGALHLRDLDPGLERKTRELLSRTIERISDGAGERIERLLEAGDRDGAMQRWQDVRGIIQEARDQGLSHEELASAFGRARQVLERIEAAKG*
Ga0055433_100486982	3300004025	Natural And Restored Wetlands	LVATSVESIAPGRWHAVNRRIWSGYMRLARRQIEGFDLEAAVRPLLRALQVRDLDLGLERRTRELLSRTIERIADGAGETIARLLKAGDREAAMQRWQDVRGLIQKARDQGMSHEELAQAFGRARQMLEQIEAVKR*
Ga0066679_103864632	3300005176	Soil	PEGPGPSRWHAANRRIWRGYTRLAQRHLEAFELEAALPPLFRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEVSP*
Ga0070703_102924411	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	RRWHAANRRIWNGYMRLARRQIEGFELEEAVRPLLRALLIRDLDLGLERRTRELLARTIERIADRAGETIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGLSHEELAQAFSRARQMLEQIEAVKR*
Ga0070708_1000278211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LAGAPPEGLGPSRWHGANRRIWRGYTRLAQRHLEAFELEAALPPLFRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKEGDRQAAMERWQDVRSLIQKARDQGLSHEQLAVAFARARQMLEQIEEVSP*
Ga0070708_1015563381	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	HLEAFELEAALPPLFRALHLGDLDLGLDRQTRELLARTIERVTEKAGESISRLLKEGNREAAMERWQYVRSVIQKARDQGLSHEQLAVAFARARQMLEQIEEVNP*
Ga0066682_104109391	3300005450	Soil	YMRLGSRDLERFELETALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQTLEQIEATKG*
Ga0070707_1019113741	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ALTPGRWHAANRRIWSGYMRLGRRSIEAFELEAALRPLFRALHLRDLDLGLERRTRELLARTIERISDGAAETIGRLLESGSREAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQLLEQIEATKG*
Ga0070697_1002913711	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LGPSRWHAANRRIWRGYTRLAQRHLEAFELEAALPPLFRALHLRDLDLELDRRTRELLARTIERVTDKAGETIGRLLKEGDRQTAMVRWQDVRSLIQKARDQGFSHEQLAVAFARARQMLEQIEEVAP*
Ga0070696_1014303702	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GFELEEAVRPLLRALLIRDLDLGLERKTRELLARTIERIADRAGETIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGLSHEELAQAFSRARQMLEQIEAVKR*
Ga0066695_102456801	3300005553	Soil	NRRIWRGYTRLAQRHLEAFELEAALPPLFCALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEVSP*
Ga0066703_108203731	3300005568	Soil	LFRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKEGDRQAAMERWQDARSVIQKARDQGLSHEQLAVAFARARQMLEQIEEVSP*
Ga0066702_108062951	3300005575	Soil	EAFELEAALPPLFRELHLRDLDLGLDRRTRQLLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEASP*
Ga0074479_107733621	3300005829	Sediment (Intertidal)	AIVAFELEAALRPLFRALHLRDLDLGLERKTREVLARTIERISDGAGERIGRLLEAGDRDAAMQRWQDVRGIIQQARDQGLSHEELAHAFGRARQMLEQIEAAKG*
Ga0074472_115085653	3300005833	Sediment (Intertidal)	REILAATSVDAVTPARWHAANRRIWSGYMRLGRRDIEGFELEAALRPLFRALHLSDLDVGLDRRTRELLARTIERISDGAGETIDRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAHAFGRARQMLEQIEATKG*
Ga0068858_1009638141	3300005842	Switchgrass Rhizosphere	IAPRRWHAANRRIWNGYMRLARRQIEGFELEEAVRPLLRALLIRDLDLGLERRTRELLARTIERIADRAGETIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGLSHEELAQAFSRARQMLEQIEAVKR*
Ga0075424_1028306152	3300006904	Populus Rhizosphere	ESIAPRRWHAANRRIWNGYMRLARRQIEGFELEEAVRPLLRALLIRDLDLGLERRTRELLARTIERIADRAGETIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGLSHEELAQAFSRVRLMLEQIEAVKR*
Ga0099793_105028562	3300007258	Vadose Zone Soil	WSGYMRLGSRDLERFELESALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQTLEQIEATKG*
Ga0099830_114689021	3300009088	Vadose Zone Soil	EAALRPLFRALHLRDLDLGLERRTRELLARTIERISDGAAETIGRLLESGSREAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQLLEHIEATKG*
Ga0099827_100461484	3300009090	Vadose Zone Soil	WHAANRRIWSGYMRLGRRSIEAFELEAALRPLFRALHLRDLDLGLERRTRELLARTIERISDGAAETIGRLLESGSREAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQLLEQIEATKG*
Ga0105247_114785712	3300009101	Switchgrass Rhizosphere	EILVATSVESIAPRRWHAANRRIWNGYMRLARRQIEGFELEEAVRPLLRALLIRDLDLGLERKTRELLARTIERIADRAGAPTGRLLNAGGRDAALQPRQQVSGLIQKARDRPVP*
Ga0114129_125115022	3300009147	Populus Rhizosphere	RIWNGYMRLARRQIEGFELEEAVRPLLRALLIRDLDLGLERRTRELLARTIERIADRAGETIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGMSHEELAQAFSRARQMLEQIEAVKR*
Ga0126374_100468882	3300009792	Tropical Forest Soil	SNQRIWNGYMRLARRQIESFELEAAVRPLLRALHLRDLELGLERRTRDLLARTIERIADRAGETVGRLLKNGDRDAAMQRWQDVRGLIQKARDQGMSHEELAQAFNRARQMLEQIEAVKR
Ga0126380_100314151	3300010043	Tropical Forest Soil	WHASNQRIWNGYMRLARRQIESFELEAAVRPLLRALHLRDLELGLERRTRDLLARTIERIADRAGETIGRLLKNGDRDAAMQRWQDVRGLIQKARDQGMSHEELAQAFNRARQMLEQIEAVKR*
Ga0126380_105576551	3300010043	Tropical Forest Soil	NQRIWNGYMRLARRQIESFELEAAVRPLLRALHLRDLELGLERRTRELLGRTIERIADRAGETIGRLLKGGDREAAMQRWQDVRGLIQRARDQGMSHEELAQAFNRARQMLEQIEAVNR*
Ga0126382_110349562	3300010047	Tropical Forest Soil	LESALRPLLRALHLRDLDMSLERRTRELLARTIERIADRAGETIVRLLKAGDRDGAMQLWQDVRGLIQKARDQGMSHEELAQAFSRARQMLEQIEAVKR*
Ga0126370_111691781	3300010358	Tropical Forest Soil	SFELEAAVRPLLRALHLRDLELGLERRTRDLLARTIERIADRAGETIGRLLKTGDRDAAMQRWQDVRGLIQKARDQGMSHEELAEAFSRARQMLEQIEAVKR*
Ga0126376_122836271	3300010359	Tropical Forest Soil	VRPLLRALHLRDLELGLERRTRDLLARTIERIADRAGETIGRLLKTGDRDAAMQRWQDVRGLIQKARDQGMSHEELAEAFSRARQMLEQIEAVKR*
Ga0126372_105732831	3300010360	Tropical Forest Soil	IWNGYMRLARRQIESFELEAAVRPLFRALHLRDLELGLERRTRELLARTIERIADRAGETIGRLLKGGDREAAMQRWQDVRGLIQKARDQGMSHEELAQAFNRARQMLEQIEAAKR*
Ga0126377_117719381	3300010362	Tropical Forest Soil	PLLRALHLRDLELGLERRTRDLLARTIERIADRAGETIGRLLKTGDRDAAMQRWQDVRGLIQKARDQGMSHEELAEAFSRARQMLEQIEAVKR*
Ga0126377_127448562	3300010362	Tropical Forest Soil	SNQRIWNGYMRLARRQIESFELEAAVRPLFRALHLRDLELGLERRTRELLARTIERIADRAGETIGRLLKGGDREAAMQRWQDVRGLIQKARDQGMSHEELAQAFNRARQMLEQIEEVKQ
Ga0126379_101125713	3300010366	Tropical Forest Soil	LESAVRPLLRALHLRDLDMSLERRTRELLARTIERIADRAGETIVRLLKAGDRDGAMQRWQDVRGLIQKARDQGMSHEELAQAFSRARQMLEQIEAVKR*
Ga0126379_109269341	3300010366	Tropical Forest Soil	LARRQIESFELEAAVRPLLRALHLRDLELGLERRTRDLLARTIERIANSAGETIGRLLKNGDRDAAMQRWQDVRGLIQKARDQGMSHEELAQAFNRARQMLEQIEAVKR*
Ga0136847_116547952	3300010391	Freshwater Sediment	ASSVDAVTPGRWHGANRRIWNGYMQRGRRDIVAFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGERIDRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAHAFGRARQMLEQIEATKE*
Ga0137442_10558872	3300011414	Soil	GYMRLGRRDIVGFELEGALRPLFRALHLRDLDLGLERRTRELLARTIERISDGAGERIDRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAHAFGRARQMLEQIEARKG*
Ga0137446_10938291	3300011419	Soil	RRDIVAFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGERIDRLLEAGDRDAATQRWQDVRGIIQQARDQGLSHEELAHAFGRARQMLEQIEATTG*
Ga0137463_13664011	3300011444	Soil	HGANRRIWNGYMRLGRREIVAFELEAALRPLFRALHLKDLDLGLERKTRELLARTIERISDGASERIDRLLEAGDLDAAMQRWQDVRGIIQKARDQGLSHEELAHAFGRARQMLEQIEATKPR*
Ga0137388_119655011	3300012189	Vadose Zone Soil	IAPRRWHAANRRIWNGYMRLARRQIEAFELEEAVRPLLRAPLIRDLDPGLERRTRELLARTIERIADSAGESIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGMSHEELAQAFSRARQMLEQIEAMKR*
Ga0137365_105768032	3300012201	Vadose Zone Soil	MRLGSRALERFELEPALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQTLEQIEATKG*
Ga0137376_107736312	3300012208	Vadose Zone Soil	ANRRIWRGYTRLAQRHLETFELEAALPPLFRALHLRDLDLGLDRRTRQLLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEVSA
Ga0137377_100318261	3300012211	Vadose Zone Soil	IWSGYMRLGSRDLERFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQTLEQIEATKG*
Ga0137447_10338541	3300012226	Soil	SVDAVTPGQWHGANRRIWNGYMQRGRRDIVAFELELALRPLFRALHLRDLDLGLERKTRALLARTIERISDGAGERIDRLLEAGDRDAAMQRWQDVRGIIQQARDQGLSHEELAHAFGRARQMLEQIEATKG*
Ga0137371_110264152	3300012356	Vadose Zone Soil	AQRHLEAFELEAALPPLFRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEVSP*
Ga0137368_101618032	3300012358	Vadose Zone Soil	MRLAQRHIEAFELEAALPPLFYALHLRDLDLGLDRHTRELLARTVERLADKAGEAVGRLLKDGDRQGAMERWQDVRAIIQKARDQGLSHEQLAVAFARARQMLEQIEEIQA*
Ga0137385_106722372	3300012359	Vadose Zone Soil	MRLARRQIEGFELEEAVRPLLRALLIRDLDLGLERRTRELLARTIERIADRAGESIGRLLKAGDREAAMQRWQDVRGLIQKARDQGMSHEELAQAFSRARQMLEQIEAVKR*
Ga0137390_113765512	3300012363	Vadose Zone Soil	NGYMRLARRQIEGFELEEAVRPLLRALLIRDLDPGLERRTRELLARTIERIADRAGESIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGMSHEELAQAFSRARQMLEQIEAMKR*
Ga0137390_117336382	3300012363	Vadose Zone Soil	LAQRHIEAFELEAALPPLFRALHLRDLDLGLDRQTRELLARSIERVTDKAGETISRLLKEGNRQAAMERWQDVRSLIQKARDQGLSHEQLAVAFARVRQMLEQIEEVSP*
Ga0137397_101654133	3300012685	Vadose Zone Soil	SGYLRLGSRDLERFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQTLEQIEATKG*
Ga0137394_102572602	3300012922	Vadose Zone Soil	AANRRIWSGYMRLGGLDIERFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQEVRGIIQKARDQGLSHEELGLAFSRARHTLEQIEATKG*
Ga0126375_100624501	3300012948	Tropical Forest Soil	NRRIWNGYMRLARRQIEGFELESALRPLLRALHLRDLDMSLERRTRELLARTIERIADRAGETIVRLLKAGDRDGAMQRWQDVRGLIQKARDQGMSHEELAQAFSRARQMLEQIEAVKR*
Ga0126375_108426992	3300012948	Tropical Forest Soil	RWHASNQRIWNGYMRLARRQIESFELEAAVRPLLRALHLRDLELGLERRTRDLLARTIERIADRAGETIGRLLKNGDRDAAMQRWQDVRGLIQKARDEGMSHEELAQAFSRARQMLEQIEAVKR*
Ga0134110_101780191	3300012975	Grasslands Soil	AANRRIWRGYRRLAQRHLEAFELEAALPPLFRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEVSP*
Ga0134076_104321451	3300012976	Grasslands Soil	EGLGPSRWHAANRRIWRGYTRLAQRHLEGFELEAALPPLFRALHMRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEVSP*
Ga0075302_10919232	3300014269	Natural And Restored Wetlands	AREILAASSVDAVTPGRWHAANRRIWSGYMRRGRRHIVAFELEAALWPLFGALHLRDLDPGLERKTRELLSRTIERISDGAGERIERLLEAGDRDGAMQRWQDVRGIIQEARDQGLSHEELASAFGRARQVLERIEAAKG*
Ga0180094_11017242	3300014881	Soil	VDAVTPGRWHGANRRIWNGYMQRGRRAIVAFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAAERIDRLLEAGDRDAAMQRWQDVRGIIQQARDQGLSHEELAHAFGRARQMLEQIEAKKG*
Ga0180086_11316822	3300014883	Soil	GANRRIWNSYMRRGRRDIVAFELEAALRPLFSALHLRDLDLVLERKTRELLARTIERISDGAGERVDRLIEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAHAFGRARQMLEQIEAKKG*
Ga0180073_11268391	3300015256	Soil	EAALRPLFRALHLRDLDLGLEGRTRELLTRTIERISDGAGETIDRLLEAGDRDAAMQRWQEVRGIIQKARDQGLSHEELAHAFGRARQILEQIEATKG*
Ga0132258_100574721	3300015371	Arabidopsis Rhizosphere	IAPRRWHAANRRIWNGYMRLARRQIEGFELEEAVRPLLRALLIRDLDLGLERRTRELLARTIERIADRAGESIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGLSHEELAQAFSRARQMLEQIEAVKR*
Ga0134069_11202912	3300017654	Grasslands Soil	LPPLFRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEVSP
Ga0184640_101986701	3300018074	Groundwater Sediment	PGQWHGANRRIWNGYMRRGRRDIVAFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGERIDRLLKAGDGAAAMQRWQDVRGIIQKARDQGLSHEELEHAFGRARQMLEHIEATKG
Ga0184629_103129491	3300018084	Groundwater Sediment	PVDAVTPGRWHGADRRIWNGYMRRGRRDIVAFELEAALRPLFRALHLRDLDLGLERKTRELLTRTIERIADGAGERIARLLEAGDRDAAMQRWQDVRGIIQQARDQGLSHEELAHAFGRARQMLEQIEATKG
Ga0066669_102804701	3300018482	Grasslands Soil	RWHAANRRIWRGYTRLAQRHLEAFELEAALPPLFCALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQLLEQIEEVSP
Ga0210379_104013662	3300021081	Groundwater Sediment	RRDIVAFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGERIDRLLEAGDREAAMQRWQEVRGIIQKARDQGLSHEELTQAFGRARQMLDQIEATKA
Ga0213917_10437901	3300021437	Freshwater	DALTPGRWHAVNRRIWGGYMRLGRRDLVGFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERIADVAGETIDRLLEAGDRNAAMQRWQDVRGIIQKARDQGLSHEELAHSFGRARRMLEQIEATKG
Ga0209126_11533452	3300025119	Soil	IVGFELEAALRPLFRALHIRDLDLGLERKTRELLARTIERISDGAGETIDRLLEAGDRDAAMQRWQEVRGIIQKARDQGLSHEELAHAFGRARQILEQIEATKG
Ga0209322_101690371	3300025146	Soil	YMRLGRRDIVGFELEAALRPLFRALHIRDLDLGLERKTRELLARTIERISDGAGETIDRLLEAGDRDAAMQRWQEVRGIIQKARDQGLSHEELAHAFGRARQILEQIEATKG
Ga0209519_104431532	3300025318	Soil	IWSGYMRLGRRDIVGFELEAALRPLFRALHIRDLDLGLERKTRELLARTIERISDGAGETIDRLLEAGDRDAAMQRWQEVRGIIQKARDQGLSHEELAHAFGRARQILEQIEATKG
Ga0209342_113410672	3300025326	Soil	FRALHIRDLDLGLERKTRELLARTIERISDGAGETIDRLLEAGDRDAAMQRWQEVRGIIQKARDQGLSHEELAHAFGRARQILEQIEATKG
Ga0210073_10679111	3300025569	Natural And Restored Wetlands	AANRRIWSGYMRLARRQIEGFDLEAAVRPLLRALQVRDLDLGLERRTRELLSRTIERIADGAGETIARLLKAGDREAAMQRWQDVRGLIQKARDQGMSHEELGQAFGRARQMLEQIEAVK
Ga0210078_10377512	3300025979	Natural And Restored Wetlands	EAALWPLFGALHLRDLDPGLERKTRELLSRTIERISDGAGERIERLLEAGDRDGAMQRWQDVRGIIQEARDQGLSHEELASAFGRARQVLERIEAAKG
Ga0209471_11540681	3300026318	Soil	APPEGPGPSRWHAANRRIWRGYTRLAQRHLEAFELEAALPPLFRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEVSP
Ga0209801_10290793	3300026326	Soil	ERAGELLAGAPPEGLGPSRWHAANRRIWRGYTRLAQRHLEAFELEAALPPLFRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEASP
Ga0209802_12880311	3300026328	Soil	ELLAGAPPEGLGPSRWHAANRRIWRGYTRLAQRHLEGFELEAALPPLLRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQDVRSLIQKARDQGLSHEQLAAAFARARQMLEQIEEVSP
Ga0257165_10177992	3300026507	Soil	PPLFRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKEGDRQAAMERWQDVRSVIQKARDQGLSHEQLAVAFARARQMLEQIEEVSP
Ga0209160_10511651	3300026532	Soil	LAQRHLETFELEAALPPLFRALHLRDLDLGLDRRTRELLARTIERVTDKAGETISRLLKDGDREAAMQRWQEVRSLIQKARDQGLSHEQLAAAFVRARQMLEQIEEVSP
Ga0209056_101474123	3300026538	Soil	AREILASTSVDALTPGRWHAANRRIWSGYMRLGSRDLERFELESALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQTLEQIEATKG
Ga0209076_11806141	3300027643	Vadose Zone Soil	SGYMRLGSRDLERFELESALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQTLEQIEATKG
Ga0209117_11327461	3300027645	Forest Soil	SLAASSVDAVTPARWHSANRRIWNGYMRRGRRDIVAFELEAALRPLFRALHLKDLDLGLERKTRELLARTIERISDGAGESIERLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAHAFGRARQMLEQIEAKKG
Ga0209701_102371481	3300027862	Vadose Zone Soil	GYTRLAQRHLEAFELEAALPPLFRALHLRDLDLGFDRRTRELLARTIERVTDKAGETISRVLKEGDRQAAMERWQDVRSLIQKARDQGLSHEQLAVAFARARQMLEQIEEVSP
Ga0209701_104749362	3300027862	Vadose Zone Soil	EAALRPLFRALHLRDLDLGLERRTRELLARTIERISDGAAETIGRLLESGSREAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQLLEHIEATKG
Ga0209590_101080183	3300027882	Vadose Zone Soil	ELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQTLEQIEATKG
Ga0209526_105531242	3300028047	Forest Soil	FDLESAVRPLLRALRLRDLDLGLERKTRELLARTIERIADGAGETIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGMSHEELAQAFGRARQMLEQIEAVKR
Ga0307469_117277891	3300031720	Hardwood Forest Soil	SVESIAPRRWHAANRRIWNGYMRLARRQIQGFELEEAVRPLLRALLIRDLDLGLERKTRELLARTIERIADRAGETIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGLSHEELAQAFSRARQMLEQIEAVKR
Ga0318501_100185541	3300031736	Soil	RIWNGYMRLARRQIESFELEAAVRPLLRALHLRDLELGLERRTRELLVRTIERIADRAGETIGRLLKGGDREAAMQRWQDVRGLIQKARDQGVSHEELAQAFNRARQMLEQIEAVKQ
Ga0318554_106876941	3300031765	Soil	SIAPRRWHASNQRIWNGYMRLARRQIESFELEAAVRPLLWALHLRDLELGLERRTRDLLARTIERIADRAGETIGRLLKNGDRDAAMQRWQDVRGLIQKARDQGMSHEELAQAFSRARQMLEQIEAVKR
Ga0318523_101888451	3300031798	Soil	AESIAPPRWHASNQRIWNGYMRLARRQIESFELEAAVRPLLRALHLRDLELGLERRTRELLVRTIERIADRAGETIGRLLKGGDREAAMQRWQDVRGLIQKARDQGVSHEELAQAFNRARQMLEQIEAVKQ
Ga0307473_105895812	3300031820	Hardwood Forest Soil	IWNGYMRLARRQIEGFELEEAVRPLLRALLIRDLDLGLERRTRELLARTVERIADRAGETIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGLSHEELAQAFGRARLMLEQIEAVKR
Ga0318499_100088801	3300031832	Soil	RWHASNQRIWNGYMRLARRQIESFELEAAVRPLLRALHLRDLELGLERRTRELLVRTIERIADRAGETIGRLLKGGDREAAMQRWQDVRGLIQKARDQGVSHEELAQAFNRARQMLEQIEAVKQ
Ga0318511_100159161	3300031845	Soil	YMRLARRQIESFELEAAVRPLLRALHLRDLELGLERRTRELLVRTIERIADRAGETIGRLLKGGDREAAMQRWQDVRGLIQKARDQGVSHEELAQAFNRARQMLEQIEAVKQ
Ga0315297_103387231	3300031873	Sediment	PGRWHGANRRIWNGYMQRGRRDIVAFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGERIGRLLEAGDRDAAMQRWQEVRGIIQQARDQGLSHEELAHAFGRARQMLEQIEATKG
Ga0326597_105108011	3300031965	Soil	FELEAALRPLFRALHIRDLDLGLERKTRELLARTIERISDGAGETIDRLLEAGDRDAAMQRWQEVRGIIQKARDQGLSHEELAHAFGRARQILEQIEATKG
Ga0315278_105755941	3300031997	Sediment	QRGRRDIVAFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGERIGRLIEAGDRDAAMQRWQEVRGIIQQARDQGLSHEELAHAFGRARQMLEQIEATKG
Ga0315278_122552542	3300031997	Sediment	PLFRALRLRDLDPGLERKTRELLTRTIERIADGAGERIARLLEAGDRDAAMQRWQDVRGIIQQARDQGLSHEELAPAFGRARQMLEQIEATKG
Ga0318575_101929831	3300032055	Soil	AREILAATSAESIAPPRWHASNQRIWNGYMRLARRQIESFELEAAVRPLLRALHLRDLELGLERRTRELLVRTIERIADRAGETIGRLLKGGDREAAMQRWQDVRGLIQKARDQGVSHEELAQAFNRARQMLEQIEAVKQ
Ga0307471_1034210741	3300032180	Hardwood Forest Soil	YMRLGRRSIEGFDLEAALRPLFRALHLRDLDLGLERRTRELLARTIERISDGAAETIGRQLQGGERDAAMQRWQDVRAIIQKARDQGLSHEELAQAFSRARQLLEQIEATKG
Ga0307472_1026406441	3300032205	Hardwood Forest Soil	RFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGETIGRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAQAFSRARQTLEQIEATKG
Ga0315287_127254271	3300032397	Sediment	AVTPGRWHGANRRIWNGYMQRGRRDIVTFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGERIGRLLEAGDRDAAMQRWQEVRGIIQQARDQGLSHEELAHAFGRARQMLEQIEATKG
Ga0315275_108236542	3300032401	Sediment	VAFELEAALRPLFRALHLRDLDLGLERKTRELLARTIERISDGAGERIGRLIEAGDRDAAMQRWQEVRGIIQQARDQGLSHEELAHAFGRARQMLEQIEATKG
Ga0335070_1001904410	3300032829	Soil	EILAATSVESIAPGRWHAANRRIWNGYMRLARRQIEGFELEAAVRPLLRALHLRDLDLSLERRTRDLLARTIERIADRAGETIARLLKAGDRDGAMQRWQDVRGLIQKARDQGMSHEELAQAFNRARQMLEQIEAVKR
Ga0326726_102756152	3300033433	Peat Soil	MRLARRQIESFDLEAGVRPLLRALHVRDLDLGLERRTRELLARTIERIADGAGETIGRLLKAGDREAAMQRWQDVRGLIQKARDQGMSHEELAQAFGRARQMLEQIEAVKR
Ga0364928_0118851_7_342	3300033813	Sediment	MRRGRRDIEAFELEAALRPLFRALHLRELDLGLERKTRELLARTIERISDGAGERIDRLLEAGDRDAAMQRWQDVRGIIQKGRDQGLSHEELAHAFGRARQMLEKIEATKG
Ga0370484_0238352_35_370	3300034125	Untreated Peat Soil	MRLARRQIEGFDLEAGVRPLLRALHVRDLDLGLERKTRELLARTIERIADGAGETIGRLLKAGDRDAAMQRWQDVRGLIQKARDQGMSHEELAQAFGRARQMLEQIEAVKR
Ga0364940_0248653_92_427	3300034164	Sediment	MRRGRRDIAAFELEAALLPLFRALHLKDLDLGLERKTRELLARTIERISDGAGERIDRLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELTHAFGRARQMLEKIEATKG
Ga0364934_0428118_14_349	3300034178	Sediment	MRRGHRHIVAFELEEALPPLFCALQLRDLDPGLERKTREILGRTIERISDGAGERIERLLEAGDRDAAMQRWQDVRGIIQKARDQGLSHEELAHAFGRAQQMLEQIEATKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089963

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences