Metagenome Family F089822

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089822
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	42 residues
Representative Sequence	MVKDINKIIRVYDEERNGDEIFFDVYELILTKLDSESLVKET
Number of Associated Samples	72
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.52 %
% of genes near scaffold ends (potentially truncated)	16.67 %
% of genes from short scaffolds (< 2000 bps)	72.22 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (26.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (32.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.57% β-sheet: 0.00% Coil/Unstructured: 61.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00239	Resolvase	39.81
PF07508	Recombinase	19.44
PF13408	Zn_ribbon_recom	1.85
PF13443	HTH_26	0.93
PF12833	HTH_18	0.93
PF13367	PrsW-protease	0.93
PF08241	Methyltransf_11	0.93
PF13683	rve_3	0.93
PF04909	Amidohydro_2	0.93
PF00076	RRM_1	0.93
PF13551	HTH_29	0.93
PF00528	BPD_transp_1	0.93
PF02780	Transketolase_C	0.93
PF00005	ABC_tran	0.93
PF00589	Phage_integrase	0.93
PF01048	PNP_UDP_1	0.93
PF01842	ACT	0.93
PF00596	Aldolase_II	0.93
PF08531	Bac_rhamnosid_N	0.93
PF00072	Response_reg	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	59.26
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	39.81
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.93
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.93
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.93 %
Unclassified	root	N/A	49.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.93 %
Unclassified	root	N/A	49.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	49.07 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.19 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	33.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %
Nanoarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota	0.93 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	32.41 %
unclassified Nanoarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
unclassified Clostridia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia	32.41 %
Nanoarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	32.41 %
Nanoarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908028\|beta3_all_NODE_107988_len_823_cov_6_058323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
2124908038\|B3_all_c_ConsensusfromContig71675	All Organisms → cellular organisms → Bacteria	6536	Open in IMG/M
3300001335\|ML8_10001223	All Organisms → cellular organisms → Bacteria	24438	Open in IMG/M
3300001335\|ML8_10001628	All Organisms → cellular organisms → Bacteria	18241	Open in IMG/M
3300001335\|ML8_10024036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	3862	Open in IMG/M
3300001335\|ML8_10060177	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1726	Open in IMG/M
3300001335\|ML8_10102498	Not Available	913	Open in IMG/M
3300001335\|ML8_10200885	Not Available	546	Open in IMG/M
3300004149\|Ga0066632_10224569	Not Available	586	Open in IMG/M
3300004212\|Ga0066631_10161098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1041	Open in IMG/M
3300005077\|Ga0071116_1060352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2265	Open in IMG/M
3300005254\|Ga0068714_10061819	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300005613\|Ga0074649_1020118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	3842	Open in IMG/M
3300005645\|Ga0077109_1014958	All Organisms → cellular organisms → Bacteria	3383	Open in IMG/M
3300005645\|Ga0077109_1026295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2277	Open in IMG/M
3300005645\|Ga0077109_1059568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1198	Open in IMG/M
3300005645\|Ga0077109_1067741	Not Available	1078	Open in IMG/M
3300005947\|Ga0066794_10130307	Not Available	755	Open in IMG/M
3300008516\|Ga0111033_1143319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1461	Open in IMG/M
3300009127\|Ga0118724_1072679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2220	Open in IMG/M
3300009149\|Ga0114918_10189641	Not Available	1200	Open in IMG/M
3300009149\|Ga0114918_10204792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1144	Open in IMG/M
3300009149\|Ga0114918_10331010	Not Available	844	Open in IMG/M
3300009320\|Ga0117909_1156162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2041	Open in IMG/M
3300009499\|Ga0114930_10362194	Not Available	679	Open in IMG/M
3300009529\|Ga0114919_10970573	Not Available	572	Open in IMG/M
3300010319\|Ga0136653_10055229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1984	Open in IMG/M
3300011118\|Ga0114922_10615427	Not Available	894	Open in IMG/M
3300011118\|Ga0114922_10879051	Not Available	730	Open in IMG/M
3300011118\|Ga0114922_11261197	Not Available	597	Open in IMG/M
3300013090\|Ga0163209_1000685	All Organisms → cellular organisms → Bacteria	14868	Open in IMG/M
3300013090\|Ga0163209_1087611	Not Available	1073	Open in IMG/M
3300013091\|Ga0163210_1090662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1105	Open in IMG/M
3300013091\|Ga0163210_1098525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1054	Open in IMG/M
3300013091\|Ga0163210_1147775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	837	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10589449	Not Available	636	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10491868	Not Available	777	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10875194	Not Available	551	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10406678	Not Available	882	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10828564	Not Available	575	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10714044	Not Available	672	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10934686	Not Available	573	Open in IMG/M
(restricted) 3300013136\|Ga0172370_10300251	Not Available	929	Open in IMG/M
(restricted) 3300013138\|Ga0172371_10164350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1936	Open in IMG/M
(restricted) 3300013138\|Ga0172371_10221234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1574	Open in IMG/M
3300014490\|Ga0182010_10074405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1662	Open in IMG/M
3300014494\|Ga0182017_10088308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2037	Open in IMG/M
3300014494\|Ga0182017_10824317	Not Available	559	Open in IMG/M
3300017989\|Ga0180432_10008874	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	12386	Open in IMG/M
3300017990\|Ga0180436_10394864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1016	Open in IMG/M
3300020074\|Ga0194113_10894362	Not Available	600	Open in IMG/M
3300020074\|Ga0194113_11070257	Not Available	534	Open in IMG/M
3300020083\|Ga0194111_10116754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2103	Open in IMG/M
3300020084\|Ga0194110_10134610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1971	Open in IMG/M
3300020084\|Ga0194110_10800051	Not Available	571	Open in IMG/M
3300022556\|Ga0212121_10001138	All Organisms → cellular organisms → Bacteria	29337	Open in IMG/M
3300022556\|Ga0212121_10100806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2198	Open in IMG/M
3300022556\|Ga0212121_10301189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1083	Open in IMG/M
3300022556\|Ga0212121_10435432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	852	Open in IMG/M
(restricted) 3300024054\|Ga0233425_10002745	All Organisms → cellular organisms → Bacteria	33795	Open in IMG/M
3300024262\|Ga0210003_1004238	All Organisms → cellular organisms → Bacteria	11416	Open in IMG/M
3300024262\|Ga0210003_1109190	Not Available	1244	Open in IMG/M
3300024353\|Ga0209979_1200454	Not Available	701	Open in IMG/M
3300025036\|Ga0210049_1336619	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	560	Open in IMG/M
3300025279\|Ga0208047_1100442	Not Available	729	Open in IMG/M
3300025314\|Ga0209323_10116550	Not Available	1801	Open in IMG/M
3300025807\|Ga0208828_1000871	All Organisms → cellular organisms → Bacteria	12639	Open in IMG/M
3300025868\|Ga0210051_1134107	Not Available	1266	Open in IMG/M
3300027690\|Ga0209164_1047316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2043	Open in IMG/M
3300028162\|Ga0268278_1044982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1154	Open in IMG/M
3300028193\|Ga0265594_1265363	Not Available	524	Open in IMG/M
3300028298\|Ga0268280_1071251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	969	Open in IMG/M
3300028299\|Ga0268276_1066697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1290	Open in IMG/M
(restricted) 3300029268\|Ga0247842_10495853	Not Available	622	Open in IMG/M
(restricted) 3300029286\|Ga0247841_10390393	Not Available	921	Open in IMG/M
3300031255\|Ga0315554_1029946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2344	Open in IMG/M
3300031255\|Ga0315554_1203655	Not Available	657	Open in IMG/M
3300031257\|Ga0315555_1046163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2276	Open in IMG/M
3300031275\|Ga0307437_1004040	Not Available	8185	Open in IMG/M
3300031278\|Ga0307431_1005223	All Organisms → cellular organisms → Bacteria	5801	Open in IMG/M
3300031278\|Ga0307431_1013993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3016	Open in IMG/M
3300031278\|Ga0307431_1023905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	2051	Open in IMG/M
3300031278\|Ga0307431_1047300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1266	Open in IMG/M
3300031278\|Ga0307431_1084599	Not Available	839	Open in IMG/M
3300031278\|Ga0307431_1126751	Not Available	629	Open in IMG/M
3300031331\|Ga0307432_1043622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1467	Open in IMG/M
3300031331\|Ga0307432_1138345	Not Available	630	Open in IMG/M
3300031337\|Ga0307430_1082883	Not Available	941	Open in IMG/M
3300031351\|Ga0307427_1000035	All Organisms → cellular organisms → Bacteria	133008	Open in IMG/M
3300031355\|Ga0307421_1166269	Not Available	672	Open in IMG/M
3300031355\|Ga0307421_1224307	Not Available	553	Open in IMG/M
3300031357\|Ga0307435_1026828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1598	Open in IMG/M
3300031365\|Ga0307443_1146760	Not Available	605	Open in IMG/M
3300031368\|Ga0307429_1093873	Not Available	855	Open in IMG/M
3300031369\|Ga0307422_1084627	Not Available	980	Open in IMG/M
3300031369\|Ga0307422_1219501	Not Available	502	Open in IMG/M
3300031539\|Ga0307380_10027805	All Organisms → cellular organisms → Bacteria	6601	Open in IMG/M
3300031539\|Ga0307380_10216514	Not Available	1836	Open in IMG/M
3300031553\|Ga0315547_1000009	All Organisms → cellular organisms → Bacteria	322358	Open in IMG/M
3300031554\|Ga0315544_1194073	Not Available	551	Open in IMG/M
3300031586\|Ga0315541_1060721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1432	Open in IMG/M
3300031624\|Ga0315545_1159432	Not Available	912	Open in IMG/M
3300031651\|Ga0315543_1152377	Not Available	665	Open in IMG/M
3300031654\|Ga0315549_1160259	Not Available	934	Open in IMG/M
3300031952\|Ga0315294_11019173	Not Available	689	Open in IMG/M
3300032020\|Ga0315296_10452064	Not Available	688	Open in IMG/M
3300032029\|Ga0315546_1061917	Not Available	1026	Open in IMG/M
3300032156\|Ga0315295_10415323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1369	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Engineered	Engineered	1.85%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	89.81%
Terrestrial	Environmental → Terrestrial	8.33%
Lab Enrichment	Engineered → Lab Enrichment	1.85%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	44.44%
Freshwater	Environmental → Aquatic → Freshwater	35.19%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	10.19%
Soil	Environmental → Terrestrial → Soil	8.33%
Defined Media	Engineered → Lab Enrichment → Defined Media	1.85%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	30.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	25.93%
Oceanic	Environmental → Aquatic → Marine → Oceanic	10.19%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	8.33%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.70%
Coastal	Environmental → Aquatic → Marine → Coastal	2.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.78%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	1.85%
Clay	Environmental → Terrestrial → Soil → Clay	1.85%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	25.93%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	21.30%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	10.19%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	9.26%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	7.41%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.70%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.85%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	1.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.85%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.85%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.93%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.93%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	16.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.04%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	10.19%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	9.26%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	9.26%
Wetlands Benthic	Environmental → Aquatic → Marine → Wetlands → Unclassified → Wetlands Benthic	5.56%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.63%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	4.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	3.70%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	3.70%
Brackish Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Brackish Water	3.70%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.78%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.85%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.85%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	1.85%
Sinkhole	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Sinkhole	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.93%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908028	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300001335	Wetlands benthic microbial communities from British Columbia, Canada - ML8	Environmental	Open in IMG/M
3300004149	Groundwater microbial communities from aquifer - Crystal Geyser CG03_land_8/20/14_0.80	Environmental	Open in IMG/M
3300004212	Groundwater microbial communities from aquifer - Crystal Geyser CG02_land_8/20/14_3.00	Environmental	Open in IMG/M
3300005077	Water filled karst sinkhole microbial communities from Little Salt Spring, North Port, Florida - Phototrophic mat 2014	Environmental	Open in IMG/M
3300005254	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG	Engineered	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300005645	Brackish water microbial communities from Lake Sakinaw in Canada: eDNA_2 (120m)	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300009127	Combined Assembly of Gp0137036, Gp0137038	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009320	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 900m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300009499	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300010319	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaG	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300013090	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_160m	Environmental	Open in IMG/M
3300013091	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_220m	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300013133 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2	Environmental	Open in IMG/M
3300013136 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.5m	Environmental	Open in IMG/M
3300013138 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12m	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300017989	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_2 metaG	Environmental	Open in IMG/M
3300017990	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_S_2 metaG	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300022556	Kivu_combined assembly	Environmental	Open in IMG/M
3300024054 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_140_MG	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300024353	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG (SPAdes)	Environmental	Open in IMG/M
3300025036	Groundwater microbial communities from aquifer - Crystal Geyser CG06_land_8/20/14_3.00 (SPAdes)	Environmental	Open in IMG/M
3300025279	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_220m (SPAdes)	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025807	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_160m (SPAdes)	Environmental	Open in IMG/M
3300025868	Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_all (SPAdes)	Environmental	Open in IMG/M
3300027690	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300028162	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_55m	Environmental	Open in IMG/M
3300028193	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_80m	Environmental	Open in IMG/M
3300028298	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_40m	Environmental	Open in IMG/M
3300028299	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_45m	Environmental	Open in IMG/M
3300029268 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_19m	Environmental	Open in IMG/M
3300029286 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18m	Environmental	Open in IMG/M
3300031255	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70	Environmental	Open in IMG/M
3300031257	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-80	Environmental	Open in IMG/M
3300031275	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-90	Environmental	Open in IMG/M
3300031278	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-170	Environmental	Open in IMG/M
3300031331	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-150	Environmental	Open in IMG/M
3300031337	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-130	Environmental	Open in IMG/M
3300031351	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-190	Environmental	Open in IMG/M
3300031355	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-70	Environmental	Open in IMG/M
3300031357	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-70	Environmental	Open in IMG/M
3300031365	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1601-220	Environmental	Open in IMG/M
3300031368	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-230	Environmental	Open in IMG/M
3300031369	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-90	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031553	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-240	Environmental	Open in IMG/M
3300031554	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-130	Environmental	Open in IMG/M
3300031586	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-190	Environmental	Open in IMG/M
3300031624	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-10	Environmental	Open in IMG/M
3300031651	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-210	Environmental	Open in IMG/M
3300031654	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-200	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032029	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-170	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
beta3_all_00492520	2124908028	Soil	MVEEINKIIRVYDKEKNNDEIFFDVYELILAKLDNE
B3_all_c_02396050	2124908038	Soil	MVEEINKIIRVYDKEKNNDEIFFDVYELILAKLDNESLVKET
ML8_1000122320	3300001335	Wetlands Benthic	MRHKIDKTIRVYNEERNGDEIFFDIYELILEKLDSESLVKET*
ML8_1000162824	3300001335	Wetlands Benthic	MDEDINRIIRIYNEEGNDDDIFIDIYELILSKLDSELLVKDT*
ML8_100240362	3300001335	Wetlands Benthic	MAQEIKKITRFYNNENNGDEIFFDAYELILSKLEEELLVKDT*
ML8_100601771	3300001335	Wetlands Benthic	MAQEIKKISRFYDKESSGDEIFFDVYELILSKLDDELLVKEP*
ML8_101024981	3300001335	Wetlands Benthic	MAQEIEKITRSYNKENDGDEIFFDVYELILSKLEDELLVKET*
ML8_102008852	3300001335	Wetlands Benthic	MVQEIKKITRSYNKENDGDEIFFDVYELILSKLEDELLVKET*
Ga0066632_102245691	3300004149	Groundwater	MIQKTNKIIRVYNEEMNGDEIIFDIYEIILEKLDSESLVNET*
Ga0066631_101610982	3300004212	Groundwater	MIQKTNKIIRVYNEEMNGDEIIFDIYEIILEKLDSESLVKET*
Ga0071116_10603524	3300005077	Sinkhole	MAQEIKRISRFYNKENSGDEIFYDVYELILSKLDDELLVKEP*
Ga0068714_100618192	3300005254	Enrichment Culture	MAQEIKKISRLYNKENSGDEIFYDVYELILSKLDDELLVKKP*
Ga0074649_10201184	3300005613	Saline Water And Sediment	MAQEIKKITRSYDKENNGDEIFFDVYELILSKLEDELLVKEP*
Ga0077109_10149582	3300005645	Brackish Water	MRTRINKIIRVYDEERNNDEIIFDVYEVILEKLDNESLVKKS*
Ga0077109_10262952	3300005645	Brackish Water	VLTVIQGINKINRIYKKDRENDEVIFDVYDMILEKLDNESLVNKS*
Ga0077109_10595681	3300005645	Brackish Water	MVKDTNKIIRVYEEERSSDEIFFDVYELILAKLDSESLVKET*
Ga0077109_10677412	3300005645	Brackish Water	MVQEINKVTRFYEKENNGDEILFDVYELILAKLDDELLVKET*
Ga0066794_101303072	3300005947	Soil	MVEEINKIIRVYDKEKNNDEIFFDVYELILAKIDNESLVKET*
Ga0111033_11433192	3300008516	Marine Sediment	MVKDTNKIIRVYDEERNGDEIFFDVYELILTKLDSESLVKET*
Ga0118724_10726791	3300009127	Marine	MAQEIKKITRSYDKENNGDEIFFDVYELILSKLEDELLVKES*
Ga0114918_101896412	3300009149	Deep Subsurface	MRTRINKIIRVYDEERNNDEIIFDVYEMILEKLDNESLVKKS*
Ga0114918_102047921	3300009149	Deep Subsurface	MIQKTNKIIRVYNEERNGDEIIFDIYEIILEKLGSESLVKET*
Ga0114918_103310102	3300009149	Deep Subsurface	MIKDTNKIIRVYEEKKNGDEIFFDVYELILAKLDSEPLVKET*
Ga0117909_11561621	3300009320	Marine	MAQEIKKITRSYDNENNGDEIFFDVYELILSKLEDELLVKES*
Ga0114930_103621942	3300009499	Deep Subsurface	MIKDANKIIRVYEEEKNGDEIFFDVYELILAKLDSETLVKET*
Ga0114919_109705731	3300009529	Deep Subsurface	MRPEINKIIRIYDEEKGSYDEIIFDIYEIILEKLDSESLVKET*
Ga0136653_100552291	3300010319	Anoxic Lake Water	MVQEINKITRFYDKENNGDEIFFDVYELILAKLDDELLVKEP*
Ga0114922_106154271	3300011118	Deep Subsurface	MVKDTNKIIRVYNEERNGDEIIFDIYEIILEKLDSESLVKET*
Ga0114922_108790512	3300011118	Deep Subsurface	MVKDINKIIRVYDEERNGDEIFFDVYELILTKLDSESLVKET*
Ga0114922_112611971	3300011118	Deep Subsurface	MVKDTNKIIRVYEEERSSDEIFFDVYELILTKLDSESLVKET*
Ga0163209_100068511	3300013090	Freshwater	MKQEIKRIIRIYDEERDGDGIFFDVYELILAKLDSELLVKDT*
Ga0163209_10876112	3300013090	Freshwater	MAQEIKKISRFYNKENSGDEIFYDVYELILSKLDDELLVKEP*
Ga0163210_10906621	3300013091	Freshwater	MVQEINKITRIYNKENNADEIFFDVYELILAKLDDELLVKEP*
Ga0163210_10985252	3300013091	Freshwater	MAQEIKKISRFYNKENSGDEIFYDAYELILSKLDDELLVKEP*
Ga0163210_11477751	3300013091	Freshwater	FKMAQEIKKISRFYNKENSGDEIFYDVYELILSKLDDELLVKEP*
(restricted) Ga0172365_105894491	3300013127	Sediment	MKKEIKKIIRIYDEEVDGDGIFFEVYELILAKLDSELLVKDT*
(restricted) Ga0172364_104918681	3300013129	Sediment	MIQKTNKIIRVYNEERNGDEIIFDIYEIILEKLDSESLVKET*
(restricted) Ga0172364_108751942	3300013129	Sediment	MKQEIKKIIRVYDEERNSNEIFFDIYELILTKLDCELLVKDT*
(restricted) Ga0172363_104066782	3300013130	Sediment	MKQEIKKIIRVYDEEGDGDGIFFDVYELILAKLDSELLVKDT*
(restricted) Ga0172363_108285641	3300013130	Sediment	MAQEIKKISRFYNKENNGDEIFYDVYELILSKLDDELLVKEP*
(restricted) Ga0172362_107140441	3300013133	Sediment	MKQEIKKIIRVYDEEEDGDGIFFDVYELILAKLDSELLVKDT*
(restricted) Ga0172362_109346862	3300013133	Sediment	MIQKTNKIIRVYNEERNGDEIIFDIYEIILEKLDSESLVKDT*
(restricted) Ga0172370_103002512	3300013136	Freshwater	MVQEINKVTRSYDKENNGDEIFFDVYELILAKLDDELLVKKT*
(restricted) Ga0172371_101643503	3300013138	Freshwater	MVQEINKVTRSYDKENNGDEIFFDVYELILAKLDDELLVKK
(restricted) Ga0172371_102212341	3300013138	Freshwater	MVQEINKITRIYNKENNADEIFFDVYELILAKLDGELLVKEP*
Ga0182010_100744053	3300014490	Fen	MVQEINKVTRSYDKENNGDEIFFDVYELILAKLDDELFVKET*
Ga0182017_100883081	3300014494	Fen	MVQEINKVIRFYDKENNGDEIFFDVYELILAKLDDELLVKET*
Ga0182017_108243171	3300014494	Fen	MVEEINKIIRVYDKEKNSDEVFFDVYELILTKLDNEPLVKET*
Ga0180432_100088742	3300017989	Hypersaline Lake Sediment	MAQEIKKITRSYDKENNGDEIFFDVYELILSKLEDELLVKES
Ga0180436_103948643	3300017990	Hypersaline Lake Sediment	MDQEIKKITRSYDKENNGDEIFFDVYELILSKLEDELLVKES
Ga0194113_108943621	3300020074	Freshwater Lake	MAQEIKKISRFYNKENSGDEIFYDVYELILSKLDDELLVK
Ga0194113_110702571	3300020074	Freshwater Lake	LLIMAQEIKKISRFYNKENSGDEIFYDVYELILSKLDDELLVKEP
Ga0194111_101167542	3300020083	Freshwater Lake	MVQEIKKITRFYNEESNGDEIFFDVYELILSKLDEELLVKES
Ga0194110_101346102	3300020084	Freshwater Lake	MRQEINKIIRVYNEEKNGDEIIFDIYEIILEKLDSESLVKDT
Ga0194110_108000511	3300020084	Freshwater Lake	SFKMAQEIKKISRFYNKENSGDEIFYDVYELILSKLDDELLVKEP
Ga0212121_1000113817	3300022556	Anoxic Lake Water	MKQEIKRIIRIYDEERDGDGIFFDVYELILAKLDSELLVKDT
Ga0212121_101008062	3300022556	Anoxic Lake Water	MAQEIKKISRFYNKENSGDEIFYDVYELILSKLDDELLVKEP
Ga0212121_103011892	3300022556	Anoxic Lake Water	MVQEINKITRIYDKENNADEIFFDVYELILAKLDDELLVKEP
Ga0212121_104354322	3300022556	Anoxic Lake Water	KKISRFYNKENSGDEIFYDAYELILSKLDDELLVKEP
(restricted) Ga0233425_1000274532	3300024054	Freshwater	MVQEIKKISRFYNKENSGDEIFFDVYELILSKLDNGLLVKQA
Ga0210003_10042382	3300024262	Deep Subsurface	MRTRINKIIRVYDEERNNDEIIFDVYEMILEKLDNESLVKKS
Ga0210003_11091901	3300024262	Deep Subsurface	MRTRINKIIRVYDEERNNDEIIFDVYEVILEKLDNESLVKKS
Ga0209979_12004541	3300024353	Deep Subsurface	MIKDANKIIRVYEEEKNGDEIFFDVYELILAKLDSETLVKET
Ga0210049_13366192	3300025036	Groundwater	MIQKTNKITRIYNEERNGDEIIFDIYEIILEKLDSESLVKET
Ga0208047_11004421	3300025279	Freshwater	FKMAQEIKKISRFYNKENSGDEIFYDVYELILSKLDDELLVKEP
Ga0209323_101165502	3300025314	Soil	MVKDTNKIIRVYNEERNGDEIIFDVYELILAKLDSESLVKET
Ga0208828_100087110	3300025807	Freshwater	LDFMKQEIKRIIRIYDEERDGDGIFFDVYELILAKLDSELLVKDT
Ga0210051_11341072	3300025868	Groundwater	MIQKTNKIIRVYNEEMNGDEIIFDIYEIILEKLDSESLVNET
Ga0209164_10473162	3300027690	Enrichment Culture	MAQEIKKISRLYNKENSGDEIFYDVYELILSKLDDELLVKKP
Ga0268278_10449822	3300028162	Saline Water	VLTVIQEINKINRIYKKDRENDEVIFDVYDMILEKLDNESLVNKS
Ga0265594_12653632	3300028193	Saline Water	INRIYKTDRENDEVIFDVYDMILEKLDNESLVNKS
Ga0268280_10712511	3300028298	Saline Water	MVQEINKVTRFYDKEINGDEIFFDVYELILAKLDDELLVKET
Ga0268276_10666972	3300028299	Saline Water	MAQEIKKISRFYDKESSGDEIFFDVYELILSKLDDELLVKEP
(restricted) Ga0247842_104958532	3300029268	Freshwater	MVQEINKVTRFYDKENNGDEIFFDVYELILAKLDDELLVKET
(restricted) Ga0247841_103903931	3300029286	Freshwater	MVQEINKVTRFYDKENNGDEIFFDVYELILAKLDDELLVKE
Ga0315554_10299462	3300031255	Salt Marsh Sediment	MKKEINKIIRVYDEEGSSDKIFFDIYELILLKLDSELLVKDT
Ga0315554_12036552	3300031255	Salt Marsh Sediment	MVKDTNKIIRVYNEERNGDEIIFDIYEIILEKLDSESLVKET
Ga0315555_10461632	3300031257	Salt Marsh Sediment	MVKDTNKIIRVYEEERSSDEIFFDVYELILAKLDSESLVKET
Ga0307437_10040403	3300031275	Salt Marsh	MVKDDNKIIRVYDEERNGDEIFFDVYELILAKLDSESLVKET
Ga0307431_10052232	3300031278	Salt Marsh	MRHKIYRTIRVYNEERNGDEIFFDIYELILEKLDSESLVKET
Ga0307431_10139932	3300031278	Salt Marsh	MDKDINRTIRVYNEERNGDEIFFDIYELILEKLDSESLVKET
Ga0307431_10239052	3300031278	Salt Marsh	MVKDTNKIIRVYEEERISDEIFFDVYELILAKLDSESLVKET
Ga0307431_10473001	3300031278	Salt Marsh	MDDSNNRIIRIYNEKRNNDDIFIDVYELILTKLDIKSLVKDT
Ga0307431_10845992	3300031278	Salt Marsh	MRHKIDRTIRVYNEERNGDEIFYDIYELILEKLDSESLVKET
Ga0307431_11267511	3300031278	Salt Marsh	MKKEINKIVRVYDEEGSDDKIFFDIYELILSKLDSELLVKDT
Ga0307432_10436222	3300031331	Salt Marsh	VFPMVKDTNKIIRVYNEEKNGDEIIFDVYELILAKLDSESLVKET
Ga0307432_11383452	3300031331	Salt Marsh	PMDDSNNRIIRIYNEKRNNDDIFIDVYELILTKLDIKSLVKDT
Ga0307430_10828831	3300031337	Salt Marsh	MKKEIKKIVRVYDEEGSSDEIFFVIYELILLKLDSELLVKDT
Ga0307427_1000035127	3300031351	Salt Marsh	MDDNNNRIIRIYNEKRNDDDIFIDVYELILAKLDSKSLVKDT
Ga0307421_11662691	3300031355	Salt Marsh	NKIIRVYDEERNGDEIFFDVYELILAKLDSESLVKET
Ga0307421_12243072	3300031355	Salt Marsh	MVKDTNKIIRVYDEERNGDEIFFDVYELILTKLDSESLVKET
Ga0307435_10268281	3300031357	Salt Marsh	MKKEINKIIRVYDEEGNGDEIFFDIYELILSKLDSELLVKDT
Ga0307443_11467602	3300031365	Salt Marsh	NKIIRVYEEERSSDEIFFDVYELILAKLDSESLVKET
Ga0307429_10938731	3300031368	Salt Marsh	MAQEIKKITRSYDKGNNGDEIFFDVYELILSKLDDE
Ga0307422_10846272	3300031369	Salt Marsh	MDDDNNRIIRIYNEKRNDDDIFIDVYELILAKLDIKSLVKDT
Ga0307422_12195012	3300031369	Salt Marsh	MVQEINKITRIYNKENNADEIFFDVYELILAKLDDELLVKEP
Ga0307380_100278051	3300031539	Soil	MIQKTNKIIRVYDEERDSDEIFFDVYELILAKLDSESLVKET
Ga0307380_102165143	3300031539	Soil	MIQKTNKIIRVYEEEKNGDEIFFDVYELILAKLDSETLVKET
Ga0315547_100000992	3300031553	Salt Marsh Sediment	MIKDTNKIIRVYEVEKNGDGIFFDVYELILTKLDSESLVKEN
Ga0315544_11940732	3300031554	Salt Marsh Sediment	MVNDTNKIIRVYNEERNGDEIIFDIYEIILEKLDSESLVKET
Ga0315541_10607212	3300031586	Salt Marsh Sediment	MVQKTNKIIRIYDEERNSDEIFFDVYELILAKLDSESLVKET
Ga0315545_11594322	3300031624	Salt Marsh Sediment	MKQEISKIIRVYDEERSSDEIFFDVYELILSKFDSELLVKDT
Ga0315543_11523772	3300031651	Salt Marsh Sediment	MLKKKFLMKKEINKILRVYDEEGSSDEIFFDIYELILLKLDSELLVKDT
Ga0315549_11602591	3300031654	Salt Marsh Sediment	MVKDTNKIIRVYDEERNGDEIFFDVYELILTKLDSESLVKE
Ga0315294_110191731	3300031952	Sediment	NKIIRVYDKEKNKDEIFFDVYELILAKLDNESLVKET
Ga0315296_104520642	3300032020	Sediment	MIKDTNKIIRVYEEEKNGDEIFFDVYELILAKLDSETLVKET
Ga0315546_10619172	3300032029	Salt Marsh Sediment	MVQKTNKIIRIYDEERNSDEIFFDVYKLILTKLDSESLVKET
Ga0315295_104153231	3300032156	Sediment	MVQEINKVTRFYEKENNGDEIFFDVYELILAKLDDELLVKET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters