NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F089525

Metagenome Family F089525

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F089525
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 45 residues
Representative Sequence MNKKTWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK
Number of Associated Samples 81
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 72.48 %
% of genes near scaffold ends (potentially truncated) 34.86 %
% of genes from short scaffolds (< 2000 bps) 72.48 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (43.119 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(53.211 % of family members)
Environment Ontology (ENVO) Unclassified
(95.413 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(98.165 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 70.21%    β-sheet: 0.00%    Coil/Unstructured: 29.79%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF06378DUF1071 28.44
PF04404ERF 18.35
PF13155Toprim_2 3.67
PF16786RecA_dep_nuc 2.75
PF11348DUF3150 1.83
PF13481AAA_25 0.92
PF01541GIY-YIG 0.92
PF13662Toprim_4 0.92
PF13203DUF2201_N 0.92
PF00565SNase 0.92



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.82 %
UnclassifiedrootN/A20.18 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10005700All Organisms → cellular organisms → Bacteria8724Open in IMG/M
3300000101|DelMOSum2010_c10010196All Organisms → cellular organisms → Bacteria6083Open in IMG/M
3300001450|JGI24006J15134_10028907All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → unclassified Puniceicoccaceae → Puniceicoccaceae bacterium TMED1492456Open in IMG/M
3300001450|JGI24006J15134_10063360All Organisms → Viruses → Predicted Viral1452Open in IMG/M
3300001450|JGI24006J15134_10175371Not Available677Open in IMG/M
3300001460|JGI24003J15210_10011992All Organisms → Viruses → Predicted Viral3477Open in IMG/M
3300001460|JGI24003J15210_10150192All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → unclassified Puniceicoccaceae → Puniceicoccaceae bacterium TMED149597Open in IMG/M
3300001460|JGI24003J15210_10154662All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.583Open in IMG/M
3300001472|JGI24004J15324_10135773Not Available585Open in IMG/M
3300005514|Ga0066866_10285115Not Available566Open in IMG/M
3300005521|Ga0066862_10009799All Organisms → Viruses → Predicted Viral3680Open in IMG/M
3300006029|Ga0075466_1001394All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae → unclassified Rhodobiaceae → Rhodobiaceae bacterium9033Open in IMG/M
3300006735|Ga0098038_1003955All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae → unclassified Rhodobiaceae → Rhodobiaceae bacterium6140Open in IMG/M
3300006735|Ga0098038_1026771All Organisms → Viruses → Predicted Viral2168Open in IMG/M
3300006735|Ga0098038_1122288Not Available884Open in IMG/M
3300006735|Ga0098038_1127907All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.859Open in IMG/M
3300006735|Ga0098038_1264596All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300006737|Ga0098037_1002063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae → unclassified Rhodobiaceae → Rhodobiaceae bacterium8979Open in IMG/M
3300006737|Ga0098037_1018408All Organisms → Viruses → Predicted Viral2624Open in IMG/M
3300006737|Ga0098037_1248399All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300006737|Ga0098037_1305588Not Available501Open in IMG/M
3300006749|Ga0098042_1039218All Organisms → Viruses → Predicted Viral1315Open in IMG/M
3300006751|Ga0098040_1071436All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300006752|Ga0098048_1183460All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.620Open in IMG/M
3300006754|Ga0098044_1000442All Organisms → cellular organisms → Bacteria21951Open in IMG/M
3300006802|Ga0070749_10095300All Organisms → Viruses → Predicted Viral1764Open in IMG/M
3300006922|Ga0098045_1010812All Organisms → Viruses → Predicted Viral2585Open in IMG/M
3300006925|Ga0098050_1042235All Organisms → Viruses → Predicted Viral1216Open in IMG/M
3300006928|Ga0098041_1017825All Organisms → Viruses → Predicted Viral2327Open in IMG/M
3300006928|Ga0098041_1294760Not Available515Open in IMG/M
3300006929|Ga0098036_1101543All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300008218|Ga0114904_1052475All Organisms → Viruses → Predicted Viral1063Open in IMG/M
3300009071|Ga0115566_10168929All Organisms → Viruses → Predicted Viral1353Open in IMG/M
3300009412|Ga0114903_1015216All Organisms → Viruses → Predicted Viral2078Open in IMG/M
3300009413|Ga0114902_1151694All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300009414|Ga0114909_1009865All Organisms → Viruses → Predicted Viral3455Open in IMG/M
3300009418|Ga0114908_1101444All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300009481|Ga0114932_10021818All Organisms → Viruses → Predicted Viral4402Open in IMG/M
3300009602|Ga0114900_1024411All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae → unclassified Rhodobiaceae → Rhodobiaceae bacterium2118Open in IMG/M
3300009605|Ga0114906_1096384All Organisms → Viruses → Predicted Viral1067Open in IMG/M
3300010150|Ga0098056_1018197All Organisms → Viruses → Predicted Viral2516Open in IMG/M
3300010150|Ga0098056_1219936Not Available632Open in IMG/M
3300010151|Ga0098061_1044980All Organisms → Viruses → Predicted Viral1735Open in IMG/M
3300010153|Ga0098059_1334220All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300010153|Ga0098059_1370776Not Available542Open in IMG/M
3300011129|Ga0151672_137249All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300011253|Ga0151671_1063367All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300011258|Ga0151677_1158658Not Available597Open in IMG/M
3300017697|Ga0180120_10405974Not Available534Open in IMG/M
3300017705|Ga0181372_1060603Not Available639Open in IMG/M
3300017713|Ga0181391_1026090All Organisms → Viruses → Predicted Viral1438Open in IMG/M
3300017731|Ga0181416_1088769All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → unclassified Puniceicoccaceae → Puniceicoccaceae bacterium TMED149735Open in IMG/M
3300017731|Ga0181416_1090202Not Available729Open in IMG/M
3300017737|Ga0187218_1089105All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300017738|Ga0181428_1004819All Organisms → Viruses → Predicted Viral3069Open in IMG/M
3300017740|Ga0181418_1103720Not Available689Open in IMG/M
3300017746|Ga0181389_1060370All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → unclassified Puniceicoccaceae → Puniceicoccaceae bacterium TMED1491090Open in IMG/M
3300017746|Ga0181389_1081822Not Available905Open in IMG/M
3300017751|Ga0187219_1135683All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300017752|Ga0181400_1199163All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → unclassified Puniceicoccaceae → Puniceicoccaceae bacterium TMED149553Open in IMG/M
3300017755|Ga0181411_1043454All Organisms → Viruses → Predicted Viral1398Open in IMG/M
3300017762|Ga0181422_1057794All Organisms → Viruses → Predicted Viral1238Open in IMG/M
3300017764|Ga0181385_1047085All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1346Open in IMG/M
3300017765|Ga0181413_1005637All Organisms → Viruses → Predicted Viral3906Open in IMG/M
3300017767|Ga0181406_1134083All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → unclassified Puniceicoccaceae → Puniceicoccaceae bacterium TMED149745Open in IMG/M
3300017773|Ga0181386_1032789All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → unclassified Puniceicoccaceae → Puniceicoccaceae bacterium TMED1491704Open in IMG/M
3300017773|Ga0181386_1073372All Organisms → Viruses → Predicted Viral1082Open in IMG/M
3300017776|Ga0181394_1050130All Organisms → Viruses → Predicted Viral1406Open in IMG/M
3300020438|Ga0211576_10084326All Organisms → Viruses → Predicted Viral1768Open in IMG/M
3300022065|Ga0212024_1098369All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300022072|Ga0196889_1011385All Organisms → cellular organisms → Bacteria1946Open in IMG/M
3300022074|Ga0224906_1077728All Organisms → Viruses → Predicted Viral1010Open in IMG/M
3300022178|Ga0196887_1005596All Organisms → Viruses → Predicted Viral4470Open in IMG/M
3300024344|Ga0209992_10045891All Organisms → Viruses → Predicted Viral2116Open in IMG/M
3300025048|Ga0207905_1003082All Organisms → Viruses → Predicted Viral3347Open in IMG/M
3300025066|Ga0208012_1004888All Organisms → Viruses → Predicted Viral2751Open in IMG/M
3300025070|Ga0208667_1024774All Organisms → Viruses → Predicted Viral1125Open in IMG/M
3300025079|Ga0207890_1062386Not Available610Open in IMG/M
3300025084|Ga0208298_1047833All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.844Open in IMG/M
3300025085|Ga0208792_1019270All Organisms → Viruses → Predicted Viral1434Open in IMG/M
3300025086|Ga0208157_1036194All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300025102|Ga0208666_1122413Not Available614Open in IMG/M
3300025110|Ga0208158_1032614All Organisms → Viruses → Predicted Viral1325Open in IMG/M
3300025110|Ga0208158_1084983All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300025112|Ga0209349_1118205Not Available740Open in IMG/M
3300025120|Ga0209535_1163088Not Available682Open in IMG/M
3300025120|Ga0209535_1183902All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.611Open in IMG/M
3300025127|Ga0209348_1084839All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300025127|Ga0209348_1100419All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.900Open in IMG/M
3300025128|Ga0208919_1066339All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300025128|Ga0208919_1085045All Organisms → Viruses → Predicted Viral1033Open in IMG/M
3300025128|Ga0208919_1188165Not Available624Open in IMG/M
3300025132|Ga0209232_1002476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae → unclassified Rhodobiaceae → Rhodobiaceae bacterium9169Open in IMG/M
3300025132|Ga0209232_1040582All Organisms → Viruses → Predicted Viral1742Open in IMG/M
3300025132|Ga0209232_1093690All Organisms → Viruses → Predicted Viral1023Open in IMG/M
3300025137|Ga0209336_10153854Not Available606Open in IMG/M
3300025151|Ga0209645_1001160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria13326Open in IMG/M
3300025151|Ga0209645_1183414Not Available627Open in IMG/M
3300025168|Ga0209337_1286260All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.607Open in IMG/M
3300025251|Ga0208182_1045919All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300025264|Ga0208029_1027173All Organisms → Viruses → Predicted Viral1361Open in IMG/M
3300025280|Ga0208449_1079517All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300025282|Ga0208030_1064556All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300025632|Ga0209194_1145088All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300025759|Ga0208899_1000143All Organisms → cellular organisms → Bacteria44298Open in IMG/M
3300029318|Ga0185543_1005268All Organisms → Viruses → Predicted Viral3405Open in IMG/M
3300029787|Ga0183757_1000459All Organisms → cellular organisms → Bacteria22329Open in IMG/M
3300029787|Ga0183757_1003096All Organisms → cellular organisms → Bacteria6208Open in IMG/M
3300029787|Ga0183757_1063416Not Available581Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine53.21%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater17.43%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean10.09%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.50%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.59%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.75%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.83%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.83%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.83%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300005514Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263EnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300011129Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02EnvironmentalOpen in IMG/M
3300011253Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeateEnvironmentalOpen in IMG/M
3300011258Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeateEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017737Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025048Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025079Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300029318Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_10005700123300000101MarineMNKKIKERRNKAMLKRYENRMKDKLANEGISREWMKDHLIIDMGGDR*
DelMOSum2010_1001019633300000101MarineMNKKTWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK*
JGI24006J15134_1002890723300001450MarineMNKKTWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLKIDMGGK*
JGI24006J15134_1006336043300001450MarineMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK*
JGI24006J15134_1017537123300001450MarineMNKKSWDKKKKGMLVRYENRIKDKLADEGISRGWMKDHLIIDMGDK*
JGI24003J15210_1001199243300001460MarineMNKKSWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK*
JGI24003J15210_1015019213300001460MarineMNKKTWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLKIDMGDK*
JGI24003J15210_1015466213300001460MarineKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK*
JGI24004J15324_1013577313300001472MarineKKTWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK*
Ga0066866_1028511513300005514MarineKKKGMLVRYENRIKDKLAEEGISKEWMKDHLIIDMGGD*
Ga0066862_10009799113300005521MarineMNKKTWEKKKKGMLVRYENRIKDKLAEEGISKEWMKDHLIIDMGGD*
Ga0075466_1001394143300006029AqueousMNKKTWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIMNMGGDK*
Ga0098038_100395533300006735MarineMNKKAWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGGDK*
Ga0098038_102677113300006735MarineKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGDK*
Ga0098038_112228833300006735MarineMNKKTWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK*
Ga0098038_112790723300006735MarineMNKKTWEKSKKGMLKRHENRIKDKLADEGISREWMKDHLIIDMGGDK*
Ga0098038_126459623300006735MarineMNKKVKERRNKAMLKRYENRMKDKLAEEGISREWMKDHLIIDMGGDK*
Ga0098037_100206313300006737MarineMNKKAWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMG
Ga0098037_101840813300006737MarineAWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGDK*
Ga0098037_124839923300006737MarineMNKKIKERRNKAMLKRYENRMKDKLAEEGISREWMKDHLIIDMGGDR*
Ga0098037_130558813300006737MarineAWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGGDK*
Ga0098042_103921823300006749MarineMNKKIKERRNKAMLKRYENRMKDKLAEEGISKEWMKDHLIIDMGGDK*
Ga0098040_107143623300006751MarineMNHKVKGKRKEAMLKRYENRMKDKLAEEGISKEWMKDHLII
Ga0098048_118346033300006752MarineMNKKAWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGDK*
Ga0098044_1000442243300006754MarineMNHKVKGKRKEAMPKRYENRMKDKLAEEGISKEWMKDHLIIDMGGD*
Ga0070749_1009530023300006802AqueousMNNKVKERRNKAMLKRYENRMKDKLAEEGISREWMKDHLIIDMGGDR*
Ga0098045_101081213300006922MarineMNKKIKERRNKAMLKRYENRMKDKLAEEGISKEWMK
Ga0098050_104223533300006925MarineMNKKIKERRNKAMLKRYENRMKDKLAEEGISKEWMKDHLIIDMGDK*
Ga0098041_101782543300006928MarineMNHKVKEKRKEAMLKRYENRMKDKLAEEGISKEWMKDHLIIDMGGD*
Ga0098041_129476013300006928MarineKAMLKRYENRMKDKLADEGISREWMKDHLIIDMGGDR*
Ga0098036_110154313300006929MarineKTTTLVRWVNMNKKTWEKKKKGMLVRYENRIKDKLAEEGISKEWMKDHLIIDMGGDK*
Ga0114904_105247523300008218Deep OceanMNKKTWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDIGGDK*
Ga0115566_1016892923300009071Pelagic MarineMNKKIKERRNKAMLKRYENRMKDKLADEGISREWMKDHLIIDMGGDR*
Ga0114903_101521623300009412Deep OceanMNKKTWEKKKKGMLVRYENRIKDKLADEGISKDWMKDHLIIDMGGDK*
Ga0114902_115169423300009413Deep OceanMNKKTWEKKKKGMLVRYENRIKDKLADEDISREWMKDHLKIDMGDK*
Ga0114909_1009865113300009414Deep OceanMNKKTWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDR*
Ga0114908_110144423300009418Deep OceanMNKKIKERRNKAMLKRYENRMKDKLADEGISREWMKDHLIIDMG
Ga0114932_1002181863300009481Deep SubsurfaceMNKKIKERRNKAMLKRYENRMKDKLADEGISKEWMKDHLIIDMGGD*
Ga0114900_102441153300009602Deep OceanMNKKTWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGGDK*
Ga0114906_109638433300009605Deep OceanMNKKIKERRNKAMLKRYENRMKDKLANEGISREWMKNNLIIDMGGDR*
Ga0098056_101819793300010150MarineWERKKKGMLVRYENRIKDKLAEEGISKEWMKDHLIIDMGGDR*
Ga0098056_121993613300010150MarineMNHKVKEKRKEAMLKRYENRMKDKLAEEGISKEWMKDHLIID
Ga0098061_104498033300010151MarineMNHKVKGKRKEAMLKRYENRMKDKLAEEGISKEWMKDHLIIDMGGD*
Ga0098059_133422023300010153MarineMNKKIKERRNKAMLKRYENRMKDKLADEGISREWMKDHLIIDM
Ga0098059_137077613300010153MarineKIKERRNKAMLKRYENRMKDKLADEGISREWMKDHLIIDMGGDR*
Ga0151672_13724923300011129MarineMNKKIKERRNKAMLKRYENRMKDKLAEEGISREWMKDHLIIDMGGDK*
Ga0151671_106336733300011253MarineLARWVNMNKKAWEKKKKGMLVRYENRIKDKLADEGISKDWMKDHLIIDMGGDK*
Ga0151677_115865823300011258MarineMNNKVKERRNKAMLKRYENRMKDKLAEEGISREWMKDHLIIDMGGDK*
Ga0180120_1040597423300017697Freshwater To Marine Saline GradientMNKKIKERRNKAMLKRYENRMKDKLAEEGISREWMKDHLIIDMGGDK
Ga0181372_106060323300017705MarineMNKKIKERRNKAMLKRYENRMKDKLAEEGISKEWMKDHLIIDMGGDR
Ga0181391_102609023300017713SeawaterMNKKSWDKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGDK
Ga0181416_108876913300017731SeawaterKKSWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0181416_109020223300017731SeawaterMWWKINKKSWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0187218_108910513300017737SeawaterMNKKAWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGGD
Ga0181428_100481943300017738SeawaterMNKKSWDKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGGDK
Ga0181418_110372013300017740SeawaterDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0181389_106037013300017746SeawaterERGLLMNKKSWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0181389_108182223300017746SeawaterMNKKAWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0187219_113568323300017751SeawaterMNKKSWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGDK
Ga0181400_119916313300017752SeawaterQEEKERGLLMNKKSWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0181411_104345413300017755SeawaterKAWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGGDK
Ga0181422_105779423300017762SeawaterMNKKAWEKKKKGMLVRYENRIKDKLAEEGISKEWMKNHLIIDMGDK
Ga0181385_104708523300017764SeawaterMNKKSWDKKKKGMLVRYENRIKDKLADEGISRGWMKDHLIIDMGDK
Ga0181413_100563733300017765SeawaterMNKKSWEKKKKGMLVRYENRIKDKLAEEGISKEWMKNHLIIDMGDK
Ga0181406_113408323300017767SeawaterNMNKKAWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLKIDMGGK
Ga0181386_103278953300017773SeawaterSWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLKIDMGGK
Ga0181386_107337223300017773SeawaterMNKKTWEKKKKGMLVRYENRIKDKLAEEGISKEWMKNHLIIDMGGDK
Ga0181394_105013023300017776SeawaterMNKKSWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0211576_1008432633300020438MarineMNKKSWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0212024_109836923300022065AqueousMNNKVKERRNKAMLKRYENRMKDKLAEEGISREWMKD
Ga0196889_101138543300022072AqueousMNKKTWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIMNMGGDK
Ga0224906_107772823300022074SeawaterMNKKAWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGGDK
Ga0196887_100559683300022178AqueousMNKKTWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK
Ga0209992_1004589123300024344Deep SubsurfaceMNKKIKERRNKAMLKRYENRMKDKLADEGISKEWMKDHLIIDMGGD
Ga0207905_100308223300025048MarineMNKKTWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLKIDMGGK
Ga0208012_100488853300025066MarineMNHKVKGKRKEAMLKRYENRMKDKLAEEGISKEWMKDHLIIDMGGD
Ga0208667_102477433300025070MarineMNKKIKERRNKAMLKRYENRMKDKLADEGISREWMKDHLIIDMGGDR
Ga0207890_106238613300025079MarineKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0208298_104783333300025084MarineMNHKVKGKRKEAMPKRYENRMKDKLAEEGISKEWMKDHLIIDMGGD
Ga0208792_101927033300025085MarineMNKKIKERRNKAMLKRYENRMKDKLAEEGISKEWMKDHLIIDMGGD
Ga0208157_103619423300025086MarineMNKKTWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK
Ga0208666_112241333300025102MarineEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGGDK
Ga0208158_103261423300025110MarineMNKKIKERRNKAMLKRYENRMKDKLAEEGISKEWMKDHLIIDMGDK
Ga0208158_108498333300025110MarineEAMLKRYENRMKDKLAEEGISKEWMKDHLIIDMGGD
Ga0209349_111820523300025112MarineMNHKVKGKRKEAMPKRYENRMKDKLAEEGISKEWMKDHLIIDMEGDKKCTV
Ga0209535_116308813300025120MarineKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0209535_118390233300025120MarineKKSWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK
Ga0209348_108483933300025127MarineMNKKAWEKKKKGMLVRYENRIKDKLADEGFSKDWMKDHLIIDMGGDK
Ga0209348_110041923300025127MarineMNKKTWEKKKKGMLKRHENRIKDKLADEGISREWMKDHLIIDMGGDK
Ga0208919_106633913300025128MarineVRWVNMNKKTWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK
Ga0208919_108504523300025128MarineMNKKTWEKSKKGMLKRHENRIKDKLADEGISREWMKDHLIIDMGGDK
Ga0208919_118816533300025128MarineWEKKKKGMLVRYENRIKDKLADEGISKEWMKDHLIIDMGGDK
Ga0209232_100247613300025132MarineMNKKAWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGDK
Ga0209232_104058213300025132MarineMNNKVKERRNKAMLKRYENRMKDKLAEEGISKKWMKDHLIIDMGDK
Ga0209232_109369023300025132MarineMNKKAWERKKKGMLVRYENRIKDKLAEEGISKEWMKDHLIIDMGGDK
Ga0209336_1015385433300025137MarineWVNMNKKTWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK
Ga0209645_100116053300025151MarineMNKKAWEKKKKGMLVRYENRIKDKLADEGISKDWMKDHLIIDMGGDK
Ga0209645_118341423300025151MarineMNNKVKERRNKAMLKRYENRMKDKLAEEGISREWMKDHLIIDIGGDK
Ga0209337_128626033300025168MarineKSWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDK
Ga0208182_104591923300025251Deep OceanMNKKTWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDR
Ga0208029_102717323300025264Deep OceanMNKKIKERRNKAMLKRYENRMKDKLANEGISREWMKDHLIIDMGGDR
Ga0208449_107951723300025280Deep OceanMNKKTWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGG
Ga0208030_106455623300025282Deep OceanMNKKTWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDIGGDK
Ga0209194_114508823300025632Pelagic MarineMNKKTWDKKKKGMLVRYENRIKDKLADEGISREWMKDHLIIDMGGDR
Ga0208899_1000143373300025759AqueousMNNKVKERRNKAMLKRYENRMKDKLAEEGISREWMKDHLIIDMGGDR
Ga0185543_100526883300029318MarineMNNKVKERRNKAMLKRYENRMKDKLAEEGISREWMKDHLIIDMGGDK
Ga0183757_100045973300029787MarineMNKKVKERRNKAMLKRYENRIKDKLADEGISREWMKDHLIIDMGGDK
Ga0183757_1003096103300029787MarineMNKKTWEKKKKGMLVRYENRIKDKLADEGISREWMKDHLKIDMGDK
Ga0183757_106341613300029787MarineKGMLVRYENRIKDKLADEGISREWMKDHLIIDIGGDK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.