NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F089471

Metagenome / Metatranscriptome Family F089471

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F089471
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 94 residues
Representative Sequence MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Number of Associated Samples 100
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.90 %
% of genes near scaffold ends (potentially truncated) 44.04 %
% of genes from short scaffolds (< 2000 bps) 77.98 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (57.798 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(16.514 % of family members)
Environment Ontology (ENVO) Unclassified
(46.789 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.798 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120
1N57_06883600
2INPhiseqgaiiFebDRAFT_1008032872
3Ga0066814_101089081
4Ga0070676_103409172
5Ga0070690_1007266362
6Ga0070680_1015417901
7Ga0070682_1006444161
8Ga0070682_1007215112
9Ga0068868_1000505072
10Ga0070661_1001251732
11Ga0070668_1000281177
12Ga0070669_1015698931
13Ga0070675_1007742812
14Ga0070671_1001485873
15Ga0070674_1005566942
16Ga0070673_1017914201
17Ga0070659_1004906121
18Ga0070713_1003056311
19Ga0070711_1007326631
20Ga0068853_1004460341
21Ga0070696_1008494562
22Ga0070665_1001372733
23Ga0068857_1016169542
24Ga0068859_1002812671
25Ga0066903_1036529421
26Ga0081540_10099462
27Ga0081540_10156443
28Ga0066651_101842512
29Ga0070715_101961582
30Ga0070716_1000423223
31Ga0070712_1000356353
32Ga0074059_121098762
33Ga0079222_125193031
34Ga0079221_100252114
35Ga0079220_103736362
36Ga0068865_1001005053
37Ga0075426_111465542
38Ga0074063_135098472
39Ga0075435_1007683841
40Ga0105245_101835182
41Ga0114129_113422781
42Ga0075423_119717501
43Ga0105241_106630392
44Ga0105242_110172501
45Ga0105242_118482502
46Ga0105242_130275781
47Ga0105248_105301481
48Ga0105237_104317541
49Ga0126374_110786912
50Ga0134065_104913631
51Ga0134128_106991792
52Ga0105239_102450433
53Ga0151490_13758581
54Ga0105246_101676151
55Ga0164300_101118712
56Ga0164298_102075342
57Ga0164302_100249063
58Ga0164302_107482482
59Ga0164308_102656082
60Ga0164308_122542222
61Ga0164304_100473803
62Ga0164304_100794993
63Ga0164307_100930382
64Ga0164305_100237741
65Ga0157373_100630244
66Ga0157370_102726142
67Ga0157374_109498792
68Ga0193728_12326892
69Ga0222622_114216541
70Ga0207713_10792743
71Ga0207682_104825742
72Ga0207642_104416441
73Ga0207680_109021131
74Ga0207663_103034463
75Ga0207660_103023451
76Ga0207687_106462531
77Ga0207706_100701984
78Ga0207709_116811111
79Ga0207669_100388974
80Ga0207669_106537492
81Ga0207665_100027241
82Ga0207667_100506745
83Ga0207651_102064771
84Ga0207668_100223191
85Ga0207641_114624982
86Ga0207674_113402931
87Ga0207675_1000244161
88Ga0209178_10726112
89Ga0207428_106488502
90Ga0268265_110735712
91Ga0307323_100624802
92Ga0307299_100303132
93Ga0307284_104582781
94Ga0307305_100119392
95Ga0307312_104892751
96Ga0307289_103844141
97Ga0307498_103884361
98Ga0318515_102449771
99Ga0307469_101123962
100Ga0307468_1002156592
101Ga0318547_109142621
102Ga0307473_100043916
103Ga0310892_105748112
104Ga0310892_109076221
105Ga0318551_109127081
106Ga0306923_115337143
107Ga0307470_100183254
108Ga0306920_1031551922
109Ga0373958_0212774_42_341
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 63.27%    β-sheet: 0.00%    Coil/Unstructured: 36.73%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAHExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered RegionsSignal PeptideTM segmentsTopol. domains
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
57.8%42.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Agricultural Soil
Soil
Grass Soil
Soil
Soil
Hardwood Forest Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Rhizosphere Soil
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
16.5%3.7%3.7%3.7%7.3%3.7%3.7%3.7%4.6%6.4%7.3%5.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N57_068836002170459013Grass SoilMAMTVIRRITATVLTTIATVLGLLVAAVAAAASPVDPNDGNGFPTSVPQPPTGPPNTTIVNSGSPWWTFVLVAAAAVAVTLLVSLLISRLRRHDAAAQVAH
INPhiseqgaiiFebDRAFT_10080328723300000364SoilMTAVRRFTATILATVAXLLGLLAXAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRRHDPATQIAH*
Ga0066814_1010890813300005162SoilMTVIRRITATVLATVGTVLGLLAVARVAAASPVSPNDGDGFPTTVSQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070676_1034091723300005328Miscanthus RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070690_10072663623300005330Switchgrass RhizosphereMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070680_10154179013300005336Corn RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQ
Ga0070682_10064441613300005337Corn RhizosphereMTAIRRLITTVLATVGTVAGLLVTAALAAAAPAPVNDGNAFTGPVPQGPATTPSTTIVNSGSPWWTFVLVAAAAVAVTLLVILAVSRMHRHPATAQLAH*
Ga0070682_10072151123300005337Corn RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHST
Ga0068868_10005050723300005338Miscanthus RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070661_10012517323300005344Corn RhizosphereMTAIRRLITTVLATVGTVAGLLVTAALAAAAPAPVNDGNTFTGPVPQGPATTPTTTIVNSGSPWWTFVLVAAAAVAVTLLVIRAVSRMHRHAATAQLAH*
Ga0070668_10002811773300005347Switchgrass RhizosphereTVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070669_10156989313300005353Switchgrass RhizosphereGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070675_10077428123300005354Miscanthus RhizosphereMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPRSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070671_10014858733300005355Switchgrass RhizosphereMTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070674_10055669423300005356Miscanthus RhizosphereMTVIRRITATVLAMVGTVLGLLVAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070673_10179142013300005364Switchgrass RhizosphereVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070659_10049061213300005366Corn RhizosphereMTAIRRITAGVLATVGTIVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVASAAIAVTLLVSLVASRLRRHATATQLAH*
Ga0070713_10030563113300005436Corn, Switchgrass And Miscanthus RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070711_10073266313300005439Corn, Switchgrass And Miscanthus RhizosphereMTAIRRITAGVLATVGTIVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLAH*
Ga0068853_10044603413300005539Corn RhizosphereMTAIRRLITAILATVGTIAGLLVTAALAAATPAPVNDGNAFTASVPQGPATTPTTTIVNSGSPWWTFVLVAAAAVAVTLLVLFAVSRIHRHTTTAQLAH*
Ga0070696_10084945623300005546Corn, Switchgrass And Miscanthus RhizosphereMTAIRRITAGVLATVGTIVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLA
Ga0070665_10013727333300005548Switchgrass RhizosphereMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDLATQIAH*
Ga0068857_10161695423300005577Corn RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVT
Ga0068859_10028126713300005617Switchgrass RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALV
Ga0066903_10365294213300005764Tropical Forest SoilMTVIRRIATTVLATVGTVLGLLAAASVAAASPVSPNDGYGFPTSVTQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVNRIRQHSTATQL
Ga0081540_100994623300005983Tabebuia Heterophylla RhizosphereMTVIRRITATVLATIGAVLGLLAAASVAAASPVSPNDGDGFPTSVTPPTGTTNTVVNSGSPWWAFVLVAAAAVAVTLLVALVVSRVRQHSTATQLAH*
Ga0081540_101564433300005983Tabebuia Heterophylla RhizosphereMTVIRRITATILATVPSVLGLLATAPVAAASPVDPNDGNAFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAVGAIAVTLLVSLLISRLRRHDAATQIAH*
Ga0066651_1018425123300006031SoilMSVIRRITATVLATVGTVLGLLAAASVAAASPVSPNDGDGFPTSVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVRRIRQHSTATQLAH*
Ga0070715_1019615823300006163Corn, Switchgrass And Miscanthus RhizosphereLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070716_10004232233300006173Corn, Switchgrass And Miscanthus RhizosphereMTAVRRITATILATVASLLGLLATAAIAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070712_10003563533300006175Corn, Switchgrass And Miscanthus RhizosphereMTVIRRITATVLAMVGTVLGLLVAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0074059_1210987623300006578SoilMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0079222_1251930313300006755Agricultural SoilMPVIRRIAAAVLSTVGGLLGLLAAASVAAASPVSPNDGDGFPTSVTQPQTGTTSAVVNSGSPWWTFVLVAAAAVVVTLLVALVVSRIRQHSTATQLAH*
Ga0079221_1002521143300006804Agricultural SoilMTAVRRITATILATVASLLGPLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRRHDPATQIAH*
Ga0079220_1037363623300006806Agricultural SoilMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRRHDPATQIAH*
Ga0068865_10010050533300006881Miscanthus RhizosphereMTVIRRITATVLAIVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0075426_1114655423300006903Populus RhizosphereTAIRRITAGVLATVGTVVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLAH*
Ga0074063_1350984723300006953SoilMTVIRRITATVLATVGTVVGLLAAASVAAASPVSPNDGNGFPTSVPQPPTGTPTSLVVDSGSPWWTFVLVAAAAAAVTLLVGLVVSRIRQHSTATQLAH*
Ga0075435_10076838413300007076Populus RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDRFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0105245_1018351823300009098Miscanthus RhizosphereMTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPASPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0114129_1134227813300009147Populus RhizosphereMTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRRHAPATQIAH*
Ga0075423_1197175013300009162Populus RhizosphereITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0105241_1066303923300009174Corn RhizosphereMTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0105242_1101725013300009176Miscanthus RhizosphereNQSANPKRSTMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0105242_1184825023300009176Miscanthus RhizosphereMTAIRRITAGVLATVGTIVGLLIAAAAAAASPAPLNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLAH*
Ga0105242_1302757813300009176Miscanthus RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVS
Ga0105248_1053014813300009177Switchgrass RhizosphereTVGTIVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLAH*
Ga0105237_1043175413300009545Corn RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPLTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0126374_1107869123300009792Tropical Forest SoilMTVIRRITAIVLATIAAVLGLLAAASVAAASPVSPNDGDGFPTSVTPPTGTTNTVVNSGSPWWAFVLVAAAAVAVTLLVALVV
Ga0134065_1049136313300010326Grasslands SoilMSVIRRITATVLATVGTVLGLLAAASVAAASPVSPNDGDGFPTSVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVGRIRQHSTATQLAH*
Ga0134128_1069917923300010373Terrestrial SoilMTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRRHDSATQIAH*
Ga0105239_1024504333300010375Corn RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVAL
Ga0151490_137585813300011107SoilMTVIRRITATVLATVGTVLGLLAVASVAAASPVSPNDGDGFPTTVSQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0105246_1016761513300011119Miscanthus RhizosphereMTAVRRITATILATVASLLGLLATAAVAAASPVVPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0164300_1011187123300012951SoilMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPCWTFVLVAVAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0164298_1020753423300012955SoilMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPSDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0164302_1002490633300012961SoilMNCWRSLPKLTNQSANPKRSTMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASMPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0164302_1074824823300012961SoilMTAIRRLITTVLATVGTVAGLLVTAALAAAAPAPVNDGNAFTGPVPQGPATTPTTTIVNSGSPWWTFVLVAAAAVAVTLLVLLAVSRMHRHTTTAQLAH*
Ga0164308_1026560823300012985SoilMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQGPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIR
Ga0164308_1225422223300012985SoilMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAV
Ga0164304_1004738033300012986SoilMTVICRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0164304_1007949933300012986SoilMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVRRLRRHDPATQIAH*
Ga0164307_1009303823300012987SoilMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRRHDPATQIAH*
Ga0164305_1002377413300012989SoilMTVICRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLL
Ga0157373_1006302443300013100Corn RhizosphereAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0157370_1027261423300013104Corn RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNAGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0157374_1094987923300013296Miscanthus RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVT
Ga0193728_123268923300019890SoilMTVIRRITATVLATVGTVLGLLAAASVAAASPVSPNDGNGFPTSVPQPPTGTPTNPVVDSGSPWWAFVLVAAAAIAVTLLVGLVVSRIRQHSTATQLAH
Ga0222622_1142165413300022756Groundwater SedimentMTVIRRITATVLAAVGTVLGLLAAASVAAASPVSPNDGNGFPTSVPQPPTGTPTNPVVDSGSPWWTFVLVAAAAVAVTLLVGLVVSRIRQHSTATQL
Ga0207713_107927433300025735Switchgrass RhizosphereMTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207682_1048257423300025893Miscanthus RhizosphereVPSRRPGPTSATWSGGAAVAEAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0207642_1044164413300025899Miscanthus RhizosphereRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0207680_1090211313300025903Switchgrass RhizosphereMTAIRRITAGVLATVGTIVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLAH
Ga0207663_1030344633300025916Corn, Switchgrass And Miscanthus RhizosphereMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207660_1030234513300025917Corn RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQDSTATQLAH
Ga0207687_1064625313300025927Miscanthus RhizosphereILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207706_1007019843300025933Corn RhizosphereAASPVDPKDGNPFPTSVPQSPASPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207709_1168111113300025935Miscanthus RhizosphereLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207669_1003889743300025937Miscanthus RhizosphereMTAVRHITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207669_1065374923300025937Miscanthus RhizosphereMTVIRRITATVLAMVGTVLGLLVAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0207665_1000272413300025939Corn, Switchgrass And Miscanthus RhizosphereVDANDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVGRLRRHDPATQIAH
Ga0207667_1005067453300025949Corn RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHST
Ga0207651_1020647713300025960Switchgrass RhizospherePAMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207668_1002231913300025972Switchgrass RhizosphereTVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0207641_1146249823300026088Switchgrass RhizosphereRSLPKLTNQSANSKRSTMTVIRRITATVLAMVGTVLGLLAADSVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0207674_1134029313300026116Corn RhizosphereMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLV
Ga0207675_10002441613300026118Switchgrass RhizosphereAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0209178_107261123300027725Agricultural SoilMTAVRRITATILATVASLLGPLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRRHDPATQIAH
Ga0207428_1064885023300027907Populus RhizosphereMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0268265_1107357123300028380Switchgrass RhizosphereLPTLTNQSANSKRSTMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0307323_1006248023300028787SoilMTVIRRITATVLAAVGTVLGLLAAASVAAASPVSPNDGNGFPTPVPQPPTGTPTNSVVDSGSPWWTFVLVAAAAVAVTLLVGLVVSRIRQHSTATQLAH
Ga0307299_1003031323300028793SoilMTVIRRITATVLAAVGTVLGLLAAASVAAASPVSPNDGNGFPTPVPQPPTGTPTNSVVDSGSPWWTFVLVAAAA
Ga0307284_1045827813300028799SoilATVLATVGTVLGLLAAASVAAASPVSPNDGNGFPTSVPQPPTGTPTNSVVDSGSPWWTFVLVAAAAVAVTLLVGLVVSRIRQHSTATQLAH
Ga0307305_1001193923300028807SoilMTVIRRITATVLAAVGTVLGLLAAASVAAASPVSPNDGNGFPTSVPQPPTGTPTNSVVDSGSPWWTFVLVAAAAVAVTLLVGLVVSRIRQHSTATQLAH
Ga0307312_1048927513300028828SoilMTVIRRITATVLATVGTVLGLLAAASVAAASPVSPNDGNGFPTSAPQPPTGTPTNPVVDSGSPWWTFVLVAAAAVAVTLLVGLVVSRIRQHSTATQLAH
Ga0307289_1038441413300028875SoilMTVIRRITATVLAAVGTVLGLLAAASVAAASPVSPNDGNGFPTPVPQPPTGTPTNSVVDSGSPWWTFVLVAAAAVAVT
Ga0307498_1038843613300031170SoilMTVIRRITATVLATVGTVLGLLAVASVAAASPVSPNDGDGFPTTVSQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0318515_1024497713300031572SoilMTVIRRIATTVLATVGTVLGLLAAASVASASPVSPNDGYGFPTSVTQSPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVNRIRQHSTATQLAH
Ga0307469_1011239623300031720Hardwood Forest SoilMTAIRRLITAILATVGTIAGLLVTAALAAATPAPVNDGNAFTGPVPQGPATTPTTTIVNSGSPWWTFVLVAAAAVAVTLLVLFAVSRIHRHTTTAQLAQ
Ga0307468_10021565923300031740Hardwood Forest SoilMTAVRRITATILATVASLLGLLATAAIAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0318547_1091426213300031781SoilMTVIRRIATTVLATVGTVLGLLAAASVAAASPVSPNDGYGFPTSVTQSPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVNRIRQ
Ga0307473_1000439163300031820Hardwood Forest SoilAMTAVRHITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0310892_1057481123300031858SoilMTAVRRITATILATVASLLGLLATAAVAAASPVVPNDGDPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0310892_1090762213300031858SoilMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQL
Ga0318551_1091270813300031896SoilMTVIRRIATTVLATVGTVLGLLAAASVASASPVSPNDGYGFPTSVTQSPTGTTNTVVNSGSPWWTFVLVAA
Ga0306923_1153371433300031910SoilMTVIRRIATTVLATVGTVLGLLAAASVASASPVSPNDGYGFPTSVTQSPTGTTNTVVNSGSPWWTFVLVAAAA
Ga0307470_1001832543300032174Hardwood Forest SoilMTAIRRLITAILATVGTIAGLLVTAALAAATPAPVNDGNAFTASVPQGPATTPTTTIVNSGSPWWTFVLVAAAAVAVTLLVLFAVSRIHRHTTTAQLAH
Ga0306920_10315519223300032261SoilTVLATVASALGLLATAAAVAGSPVDPNDGNGFPTSVPQSPTNPPSTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLISRLRRHDAAAQIAH
Ga0373958_0212774_42_3413300034819Rhizosphere SoilMTAVRRITATILATVASLLGLLATAAIADASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.