Metagenome / Metatranscriptome Family F089289

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089289
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	101 residues
Representative Sequence	MLTIFDSESPLSEQEMLEVREYAKERIGLWRRRSIYSTVALLLSCASVYPFLEGHPLHQYWESFGKYLVLLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG
Number of Associated Samples	91
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.87 %
% of genes near scaffold ends (potentially truncated)	25.69 %
% of genes from short scaffolds (< 2000 bps)	77.06 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.147 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.349 % of family members)
Environment Ontology (ENVO)	Unclassified (32.110 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.881 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.44% β-sheet: 0.00% Coil/Unstructured: 32.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF14534	DUF4440	8.26
PF00478	IMPDH	4.59
PF03734	YkuD	3.67
PF00589	Phage_integrase	2.75
PF13671	AAA_33	2.75
PF01196	Ribosomal_L17	1.83
PF00588	SpoU_methylase	1.83
PF15780	ASH	1.83
PF01887	SAM_HAT_N	1.83
PF08818	DUF1801	0.92
PF13442	Cytochrome_CBB3	0.92
PF02371	Transposase_20	0.92
PF13518	HTH_28	0.92
PF14559	TPR_19	0.92
PF02954	HTH_8	0.92
PF12728	HTH_17	0.92
PF02661	Fic	0.92
PF03118	RNA_pol_A_CTD	0.92
PF12543	DUF3738	0.92
PF11306	DUF3108	0.92
PF12697	Abhydrolase_6	0.92
PF00857	Isochorismatase	0.92
PF13620	CarboxypepD_reg	0.92
PF14344	DUF4397	0.92
PF01156	IU_nuc_hydro	0.92
PF03572	Peptidase_S41	0.92
PF09933	DUF2165	0.92
PF01035	DNA_binding_1	0.92
PF02423	OCD_Mu_crystall	0.92
PF10754	DUF2569	0.92
PF08281	Sigma70_r4_2	0.92
PF00682	HMGL-like	0.92
PF03449	GreA_GreB_N	0.92
PF01541	GIY-YIG	0.92
PF08238	Sel1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	3.67
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	3.67
COG0203	Ribosomal protein L17	Translation, ribosomal structure and biogenesis [J]	1.83
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	1.83
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	1.83
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	1.83
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	1.83
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.92
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	0.92
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.92
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.92
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.92
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.92
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	0.92
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.92
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.92
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.92
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.92

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.15 %
Unclassified	root	N/A	23.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.15 %
Unclassified	root	N/A	23.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.15 %
Unclassified	root	N/A	23.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	58.72 %
Unclassified	root	N/A	23.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	36.70 %
Unclassified	root	N/A	23.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	35.78 %
Unclassified	root	N/A	23.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	35.78 %
Unclassified	root	N/A	23.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	4.59 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	3.67 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.75 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.83 %
Klebsiella/Raoultella group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group	0.92 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.92 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	4.59 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	3.67 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.83 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.83 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.92 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	0.92 %
Klebsiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	4.59 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	3.67 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.83 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.92 %
Klebsiella aerogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	0.92 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.92 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001131\|JGI12631J13338_1004754	All Organisms → cellular organisms → Bacteria	2520	Open in IMG/M
3300001471\|JGI12712J15308_10002653	All Organisms → cellular organisms → Bacteria	5279	Open in IMG/M
3300001593\|JGI12635J15846_10002206	All Organisms → cellular organisms → Bacteria	17071	Open in IMG/M
3300002245\|JGIcombinedJ26739_100012458	All Organisms → cellular organisms → Bacteria	7000	Open in IMG/M
3300002245\|JGIcombinedJ26739_100034576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4506	Open in IMG/M
3300004080\|Ga0062385_10070142	All Organisms → cellular organisms → Bacteria → Acidobacteria	1597	Open in IMG/M
3300004082\|Ga0062384_100041512	All Organisms → cellular organisms → Bacteria	2163	Open in IMG/M
3300004092\|Ga0062389_101978597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	760	Open in IMG/M
3300004152\|Ga0062386_100134964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1917	Open in IMG/M
3300005436\|Ga0070713_100630918	Not Available	1019	Open in IMG/M
3300005591\|Ga0070761_10102470	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1650	Open in IMG/M
3300005591\|Ga0070761_10339554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	909	Open in IMG/M
3300005602\|Ga0070762_10014499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4020	Open in IMG/M
3300005602\|Ga0070762_10391417	Not Available	894	Open in IMG/M
3300005602\|Ga0070762_11254148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	514	Open in IMG/M
3300005610\|Ga0070763_10626433	Not Available	625	Open in IMG/M
3300005610\|Ga0070763_10646419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	616	Open in IMG/M
3300005712\|Ga0070764_10545461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	702	Open in IMG/M
3300005921\|Ga0070766_10492579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	813	Open in IMG/M
3300005921\|Ga0070766_10786415	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006059\|Ga0075017_100369445	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300006059\|Ga0075017_100574513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300006174\|Ga0075014_100773129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300006893\|Ga0073928_10324066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1149	Open in IMG/M
3300009038\|Ga0099829_10578780	All Organisms → cellular organisms → Bacteria → Acidobacteria	933	Open in IMG/M
3300009624\|Ga0116105_1011944	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300009634\|Ga0116124_1188575	Not Available	574	Open in IMG/M
3300009636\|Ga0116112_1032621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1639	Open in IMG/M
3300009637\|Ga0116118_1260922	Not Available	530	Open in IMG/M
3300009645\|Ga0116106_1033555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1755	Open in IMG/M
3300009701\|Ga0116228_10385718	Not Available	970	Open in IMG/M
3300009764\|Ga0116134_1016478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3065	Open in IMG/M
3300010343\|Ga0074044_10467005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	825	Open in IMG/M
3300011120\|Ga0150983_15710555	Not Available	802	Open in IMG/M
3300011271\|Ga0137393_11111511	Not Available	672	Open in IMG/M
3300012096\|Ga0137389_11375904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	601	Open in IMG/M
3300012189\|Ga0137388_10814445	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300012202\|Ga0137363_11168480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300012203\|Ga0137399_10861007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300012205\|Ga0137362_10824473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	794	Open in IMG/M
3300012922\|Ga0137394_10445300	Not Available	1102	Open in IMG/M
3300012924\|Ga0137413_10636864	Not Available	802	Open in IMG/M
3300014156\|Ga0181518_10005141	All Organisms → cellular organisms → Bacteria → Acidobacteria	11423	Open in IMG/M
3300014156\|Ga0181518_10457073	Not Available	609	Open in IMG/M
3300014169\|Ga0181531_10108155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1664	Open in IMG/M
3300014491\|Ga0182014_10157482	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1273	Open in IMG/M
3300014493\|Ga0182016_10052533	All Organisms → cellular organisms → Bacteria	3161	Open in IMG/M
3300014494\|Ga0182017_10985092	Not Available	506	Open in IMG/M
3300014838\|Ga0182030_10377130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1495	Open in IMG/M
3300015193\|Ga0167668_1001990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4336	Open in IMG/M
3300016702\|Ga0181511_1347290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1067	Open in IMG/M
3300017935\|Ga0187848_10276970	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300017946\|Ga0187879_10567099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	630	Open in IMG/M
3300017948\|Ga0187847_10008970	All Organisms → cellular organisms → Bacteria → Acidobacteria	6751	Open in IMG/M
3300017948\|Ga0187847_10119168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1448	Open in IMG/M
3300018016\|Ga0187880_1114697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1309	Open in IMG/M
3300018021\|Ga0187882_1096539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1270	Open in IMG/M
3300018040\|Ga0187862_10562511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	679	Open in IMG/M
3300018042\|Ga0187871_10077783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1939	Open in IMG/M
3300018043\|Ga0187887_10352575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	868	Open in IMG/M
3300018047\|Ga0187859_10463171	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300020579\|Ga0210407_10153542	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300020580\|Ga0210403_10178882	Not Available	1738	Open in IMG/M
3300020583\|Ga0210401_10017953	All Organisms → cellular organisms → Bacteria → Acidobacteria	6825	Open in IMG/M
3300021168\|Ga0210406_10009913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9440	Open in IMG/M
3300021170\|Ga0210400_10001000	All Organisms → cellular organisms → Bacteria → Acidobacteria	29101	Open in IMG/M
3300021170\|Ga0210400_10009291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7970	Open in IMG/M
3300021170\|Ga0210400_10886611	Not Available	729	Open in IMG/M
3300021180\|Ga0210396_11122859	Not Available	661	Open in IMG/M
3300021181\|Ga0210388_10181712	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	1836	Open in IMG/M
3300021181\|Ga0210388_10411931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1188	Open in IMG/M
3300021181\|Ga0210388_10474947	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300021402\|Ga0210385_11215493	Not Available	578	Open in IMG/M
3300021402\|Ga0210385_11471491	Not Available	520	Open in IMG/M
3300021407\|Ga0210383_10023328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5203	Open in IMG/M
3300021420\|Ga0210394_11037814	Not Available	709	Open in IMG/M
3300021433\|Ga0210391_10014666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6328	Open in IMG/M
3300021433\|Ga0210391_10050301	All Organisms → cellular organisms → Bacteria → Acidobacteria	3317	Open in IMG/M
3300021475\|Ga0210392_10032397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3086	Open in IMG/M
3300021559\|Ga0210409_10122136	All Organisms → cellular organisms → Bacteria → Proteobacteria	2394	Open in IMG/M
3300022557\|Ga0212123_10144869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1842	Open in IMG/M
3300022730\|Ga0224570_101164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	2043	Open in IMG/M
3300022732\|Ga0224569_113502	Not Available	572	Open in IMG/M
3300022733\|Ga0224562_1018910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	564	Open in IMG/M
3300025477\|Ga0208192_1102347	Not Available	514	Open in IMG/M
3300025928\|Ga0207700_10172857	All Organisms → cellular organisms → Bacteria → Acidobacteria	1803	Open in IMG/M
3300026557\|Ga0179587_10601067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300027072\|Ga0208238_1010348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	785	Open in IMG/M
3300027545\|Ga0209008_1032901	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300027609\|Ga0209221_1001873	All Organisms → cellular organisms → Bacteria	5340	Open in IMG/M
3300027610\|Ga0209528_1018614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1525	Open in IMG/M
3300027648\|Ga0209420_1071798	Not Available	1009	Open in IMG/M
3300027648\|Ga0209420_1155297	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300027676\|Ga0209333_1004092	All Organisms → cellular organisms → Bacteria	5501	Open in IMG/M
3300027676\|Ga0209333_1064848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	1003	Open in IMG/M
3300027698\|Ga0209446_1122613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	670	Open in IMG/M
3300027768\|Ga0209772_10052070	All Organisms → cellular organisms → Bacteria → Acidobacteria	1219	Open in IMG/M
3300027768\|Ga0209772_10164840	Not Available	697	Open in IMG/M
3300027853\|Ga0209274_10232436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	942	Open in IMG/M
3300027884\|Ga0209275_10117589	Not Available	1379	Open in IMG/M
3300027895\|Ga0209624_10870075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300028047\|Ga0209526_10267586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300028536\|Ga0137415_11378337	Not Available	526	Open in IMG/M
3300030743\|Ga0265461_10518437	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300031232\|Ga0302323_102672425	Not Available	570	Open in IMG/M
3300031234\|Ga0302325_10481700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1885	Open in IMG/M
3300031261\|Ga0302140_11160088	Not Available	519	Open in IMG/M
3300031524\|Ga0302320_10171351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3201	Open in IMG/M
3300031962\|Ga0307479_10531214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1159	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.25%
Host-Associated	Host-Associated	2.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.97%
Aquatic	Environmental → Aquatic	30.28%
Plants	Host-Associated → Plants	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.30%
Freshwater	Environmental → Aquatic → Freshwater	25.69%
Peat	Environmental → Terrestrial → Peat	3.67%
Sediment	Environmental → Aquatic → Sediment	2.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.83%
Peat Moss	Host-Associated → Plants → Peat Moss	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.19%
Loam	Environmental → Terrestrial → Soil → Loam	27.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	19.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	14.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	11.01%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.09%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.75%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.75%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.92%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.92%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.92%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300022732	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1	Host-Associated	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027072	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12631J13338_10047542	3300001131	Forest Soil	MLTIFDSESPLSNEEMLEVRQFAKERIGLWRRRFVYSIVALVLACASVIPFSKGHSLHAHAEPFGRLLVYLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG*
JGI12712J15308_100026538	3300001471	Forest Soil	MLTIPTIFDSESPLSNQELLEVMQYAKEHIGLWRRRSLYSAVAHLLSCASVYPFLKGHPLHEYWESFGEYLVLLSMATLVVFVLCTGFFYSAWQALRDVEKENG*
JGI12635J15846_1000220625	3300001593	Forest Soil	MLTIFDFRSPPSNEEMLEVRQYAKERIGLWRRRSIYSTIAFLLSCAGVYPFLQGHPLHHYWESFGKYLVLLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG*
JGIcombinedJ26739_1000124589	3300002245	Forest Soil	MLTIPTIFDSESPLSNQELLEVMQYAKEHIGLWRRRSLYSAVAHLLSCASVYPFLKGHPLHEYWESFGKYLVLLSMATLVVFVLCTGFFYSAWQALRDVEKENG*
JGIcombinedJ26739_1000345767	3300002245	Forest Soil	MLTIFDSESPLSEQEMLEVREYAKERIGLWRRRSIYSVVALATSCASVIPFSKGHSLHAHAEPFGRLLVLLSMGLLVVFVLCTGFFYSAWQALRDVEKGQG*
Ga0062385_100701422	3300004080	Bog Forest Soil	MTIFDTESPLSDEEIVGVRQYARERIGLWRKRALYSTVAFLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGLFWSAWQALRDVEKGQT*
Ga0062384_1000415123	3300004082	Bog Forest Soil	MLTIFDSDSPLSHQEMLEVREYARERIGLWRKRFLYSTVALLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSTTLFLVFVYCTGLFWAAWQALRDVEKGQG*
Ga0062389_1019785972	3300004092	Bog Forest Soil	MMTIFDTESPLSDEEIVGVRQYARERIGLWRKRALYSTVAFLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGLFWSAWQALRDVEKGQT*
Ga0062386_1001349642	3300004152	Bog Forest Soil	MTIFDAESPLSDEEIVEVRQYARERIGLWRKRSLYSTVALLLSCGFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGLFWSAWQALRDVEKGQT*
Ga0070713_1006309182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLTMLDSESPLSDQEMLEVRQCAKERIGLWRRRSIYSTVALLLSCASVDPFLKGHPLHEHWESFGKYLVLLSMAMLVVFVLCTGFFYSAWQALRDAEKGQQ*
Ga0070761_101024702	3300005591	Soil	VSVTDSVNHGPSQVHCLAYGHGPLVTMLTIFDSESPLSEQEMLEVREYAKERIGVWRRRSIYSTVALLLSCASVYPFLEGHPLHQYWESFGKYLVPLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG*
Ga0070761_103395542	3300005591	Soil	MLTIFDEERPLSDEEMADVRQYAAERIAVWRMRSLYSIVALLLSCASVIPFSKGHDRHAYAEPFGRLLVYLSRAMLVVFVLCTGFWYSAWQALRDVEKGQL*
Ga0070762_100144993	3300005602	Soil	MLTVLDSDGPLSDQEMLEVQQYAKERISLWRRRSIRSIVAFLLSCLGTYPFLQGHPLHEYWGAFGKYLVLVSMAMLVVFVFCTGFFYSAWRALREVEKGQR*
Ga0070762_103914171	3300005602	Soil	MLTIFDSESPLSEQEMLEVREYAKERIGVWRRRSIYSTVALLLSCASVYPFLEGHPLHQYWESFGKYLVPLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG*
Ga0070762_112541481	3300005602	Soil	SDEEIVEVRQYARERIGLWRQRSLYSVVALLLSCASVIPFSKGHSLHAHAEPFGRLLVYLSMALLVVCVYCTGLFWSAWQALRDVEKGQK*
Ga0070763_106264332	3300005610	Soil	TMPTIFDSESPLSKQEMLEVRQHAKEHIGLWRGRSIYSTVALLLSCASVYPFSEGHPLHQYWESFGKYLVLLSMAMLVVFILCTGFFYSAWQALRDVEKGQR*
Ga0070763_106464191	3300005610	Soil	LSDEEMSDVRQYAAERIAVWRMRSLYSIVALLLSCASVIPFSKGHDLHAYAEPFGRLLVYLSMAMLAVFVLCTGFWYSAWQALRDVEKGQV*
Ga0070764_105454613	3300005712	Soil	MRDMLAIFDAESPLSDEEMLEVREYAKERIGLWRRRSIYSVAALLASCASVVPFSKGHSLHAHAEPFGRLLVVLSMGLLVVFVLCTGFFYSAWQALRDVEKGQL*
Ga0070766_104925792	3300005921	Soil	MNSIFDTSEEPLSKEELIEVREYANERIRLWRKRSLYSGIALFLSCASVGPFLRGHSLHAHWDSFGKYLVLLSMGLLVVFVYCTGLAWSAWMALRDVTKA*
Ga0070766_107864152	3300005921	Soil	MLTIFDEERPLSDEEMSDVRQYAAERIAVWRMRSLYSIVALLLSCASVIPFSKGHDLHAYAEPFGRLLVYLSMAMLAVFVLCTGFWYSAWQALRDLEKGQV*
Ga0075017_1003694452	3300006059	Watersheds	MTLFDSEPALSKEEIVEVTQYAGKRIALWRKRSIYSTVALLLSCALVYPFLEGHTLHSYWESFGKYLIFISMALLVVWVNCAGLWWSAWQALRDAEKGRA*
Ga0075017_1005745132	3300006059	Watersheds	MLTIFDSESPLSEQEMLEVRQYARERIGLWRKRSLYSSAALLLSCASVIPFSNGHSLHAHSEPFGRLFVYLSMAMLVVFVLCIGFFYSAWQALRDVEKGQV*
Ga0075014_1007731291	3300006174	Watersheds	VRQYARERIGLWRKRSLYSSAALLLSCASVIPFSNGHSLHAHSEPFGRLFVYLSMAMLVVFVLCIGFFYSAWQALRDVEKGQV*
Ga0073928_103240662	3300006893	Iron-Sulfur Acid Spring	MIFDIPEPLNEEEMVEVREYAGERIRLWRRRALCSTVALLLSCAFVCPFLEGHALHKYWESFGKYLVLVSMALLVVFVFCTGLFWSAWQALRDVEKEQTWPR*
Ga0099829_105787801	3300009038	Vadose Zone Soil	MLTIFDSESPLSEQEMLEVRQYARERIGLWRRRSVYSTVAFLLSCAGVYPFLEGHPLHKYWESFGKYLVLVSMAMLVVFVLCTGFFYSAWQALRDVEKGQG*
Ga0116105_10119442	3300009624	Peatland	MMIFDTEGPLSDEEMGEVRQYAKERIGLWRRRSLYSTVALLASFACVYPFLYGNLLHKYWDSFGKYLILVSMTLLVVFVYCTGLYWSAWQALRDVEKGQM*
Ga0116124_11885751	3300009634	Peatland	MMTIFDTESPLSDDEIVGVRHYARERIAVWLRRALYSTVALLLSCASVIPFSKGHSLHAYAEPFGRLLVYLSMALLVVFVYCTGLFWSA
Ga0116112_10326212	3300009636	Peatland	MMTIFDTESPLSDDEIVGVRHYARERIAVWLRRALYSTVALLLSCASVIPFSKGHSLHAYAEPFGRLLVYLSMALLVVFVYCTGLFWSAWQALRDVEKGQE*
Ga0116118_12609221	3300009637	Peatland	RPIWTSFLSSDQIVVEASSNVMTIFDTESPLSDEELIEVRQYARERIGVWRRRSLYSTVALLLSCASVIPFSKGHSLHAYAEPFGRLLVYLSMALLVVFVYCTGLFWSAWQALRDVEKGQE*
Ga0116106_10335552	3300009645	Peatland	MMTIFDTESPLSDDEIVGVRHYARERIAVWLRRALYSTVALLLSCASVIPFSKGHSLHAHAEPFGRLLVYLSMALLVVFVYCTGLFWSAWQALRDVEKGQE*
Ga0116228_103857182	3300009701	Host-Associated	MTSASDSEEELAEAKENARRRFEVWRRRSLYSTVLLLLSCASVVPFSKGHSLHVYAEPLGRLLVYLSMGMLLVFLYCTGLFYGAWQCLRDLKSGRT*
Ga0116134_10164784	3300009764	Peatland	MTIFDTESPLSDEELIEVRQYARERIGVWRRRSLYSTVALLLSCASVIPLSKGHSLHAHAEPFGRLLVYLSMALLVVWVYCTGLFWSAWQALRDVEKGQE*
Ga0074044_104670052	3300010343	Bog Forest Soil	MTIFDAESPLSDEEMVGVRQYARERIGLWRKRSIYSTVALLLSCASAYSFLEGHALHKYWESFGKYLILVSMALLVVWVYCTGLFWSAWQALRDVEKGQA*
Ga0150983_157105552	3300011120	Forest Soil	MPTIFDSESPLSKQEMLEVRQHAKEHIGLWRGRSIYSTVALLLSCASVYPFLEGHPLHQYWESFGKYLVLLSMAMLVVFILCTGFFYSAWQALRDVEKGQR*
Ga0137393_111115111	3300011271	Vadose Zone Soil	MLTIFDSESPLSDEDMLEVRQFASERISLWRRRSLYSALALLVSCASVIPFSKGHSLQAHSEPFGRLLVLLSMALLVVFVLCTGFFYSAWQALRDVEKDRGR*
Ga0137389_113759041	3300012096	Vadose Zone Soil	MTVLLMIFDTPEPLNEEEMVEIRRQAGERIGLWRKRALYSTVALLLSCAFVYPFLEGHPLHKYWESFGKYLILVSMALLVVFVFCTGLFWSAWQALRDVEKGQILPR*
Ga0137388_108144452	3300012189	Vadose Zone Soil	MLMIFDSESPLSEQEMLEVREYAKERIGLWRRRSIYSVVALAASCASVIPFSKGHSLHAHAEPFGRLLVLLSMGLHLVFVLCTGFFYSAWQALRDVEKGQG*
Ga0137363_111684802	3300012202	Vadose Zone Soil	MMTIFDSESPLTDEEMLEVRQYARERIDLWRRRALYSVGALLLSCASVIPFSKGHSLHAYAEPFGKLLVCLSMALLVVCVLCTGFFWSAWQALRDVEKGQT*
Ga0137399_108610071	3300012203	Vadose Zone Soil	MGDMLTIFDAEGPLSDEEMSEVRQYAAKRIALWRRRSLYSTAALVLICAFIYQFLAGHPLHAYWESFGKYLVFVAMALLVAFVLCAGFFYSAWQALRDVEKGQV*
Ga0137362_108244731	3300012205	Vadose Zone Soil	SRDQPRGANPPDRSILRMSILLMIFDTPEPLNDEEMVEVRKYAGRRIRLWRRRSLYSAVALLLSCASVVPFSKGYSLHAHSEPFGRLLVYLSMAMLVVFVLCTGFFYSAWQALRDVEKEQT*
Ga0137394_104453001	3300012922	Vadose Zone Soil	MLTIFDSESPLSGREMLALRQYAREHIGLWRRRSIYSAVAFLLSCAGVYPFLKGHPLHGHWESFGKYLVLVSMFTLVVFVMCTGFFYSAWQALRDVEKGRAGSGE*
Ga0137413_106368642	3300012924	Vadose Zone Soil	MLTIFDSESPLSSQEMLKVREYAREHIGLWRRRSIYSAVAFLLSCAGVYPFLKGHPLDGHWESFGKYLVLVSMFMLVVFLMCTGFLYSAWQALRDVEKGQGR*
Ga0181518_100051419	3300014156	Bog	MAIFDTETPLSDEEIVGVRHYAREGIGLWRKRSIYSAVVFLLSCASVYPFLEGHALHKYWESFGKYLILVSMALLVACVYRTELFWSGWQALRDVEKRQA*
Ga0181518_104570732	3300014156	Bog	MMTIFDTESPLSDEEMEEVRQYAKERISLWRRRSLYSAVALTLSCASVIPFCKGHSLHGHWEPVGRLLVLLSMALLVVFVYCTGLFWSAWQALRDVEKGQE*
Ga0181531_101081554	3300014169	Bog	MLTIFDAESPLSDEEMSDVRQYAAERIAAWRSRSLYSTAALALTCAFIYPFLVGHSLHKYWESFGKYLIFVAMALLVVFVLCIGFWYSASQALRDVDKGQP*
Ga0182014_101574822	3300014491	Bog	MMTIFDTESPLSDEELVEVRQYARERIGLWRRRSLYSAVALLVSCACVYPFLKGHSLHEYWESFGKYLILVSMALLVVFVYCAGLFWSAWQALRDVEKGQA*
Ga0182016_100525333	3300014493	Bog	MTIFDAERPLSDEEIVGVRQYARERIGLWRKRSLYSTVALLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGVFWSAWQALRDVEKGQT*
Ga0182017_109850921	3300014494	Fen	SPLSEEELVEVRQYAKERITLWRKRALYSIVALLLSCTSVIPFSKGHSLHAHCEPFGRLLVYLSMVIFVACVYCTGLFWSEWQALRDVEKGQN*
Ga0182030_103771301	3300014838	Bog	QYARERIGLWRKRSLYSTVALLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGVFWSAWQALRDVEKGQT*
Ga0167668_10019906	3300015193	Glacier Forefield Soil	MLMIFDSESLLSDQEMLEVRQYARERICLWRRRSIYSTAAFLLSCAAVYPFLKGDPLHEYWESFGKYLVLVSMAMLVMFAMCAGFFYSAWQPLRDVKKGQE*
Ga0181511_13472902	3300016702	Peatland	MAIFDTETPLSDEEIVGVRHYAREGIGLWRKRSIYSAVVFLLSCASVYPFLEGHALHKYWESFGKYLILVSMALLVACVYRTELFWSGWQALRDVEKRQA
Ga0187848_102769701	3300017935	Peatland	MMTIFDTESPLSDDEIVGVRHYARERIAVWLRRALYSTVALLLSCASVIPFSKGHSLHAYAEPFGRLLVYLSMALLVVFVYCTGLFWSAWQALRDVEKGQE
Ga0187879_105670992	3300017946	Peatland	RTFSDEEIVEVRQYARERIGLWRKRSLYSTVALLLSCGFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGLFWSAWQALRDVEKGQT
Ga0187847_100089703	3300017948	Peatland	MTLFDSESPLSDEEIVEVRQYAGEHIGLWRRRSIYSTIALILSCAFVYLFLAGHTLHNYWESFGKYLILVSMVLLIVWVYCTALWYNAWQALRDVEKGRVQP
Ga0187847_101191682	3300017948	Peatland	MTIFDAESPLSDEEIVEVRQYARERIGLWRKRSLYSTVALLLSCGFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGLFWSAWQALRDVEKGQT
Ga0187880_11146971	3300018016	Peatland	MTIFDTESPLSDEELIEVRQYARERIGVWRRRSLYSTVALLLSCASVIPLSKGHSLHAHAEPFGRLLVYLSMALLVVWVYCTGLFWSAWQALRDVEKGQE
Ga0187882_10965391	3300018021	Peatland	FDTESPLSDDEIVGVRHYARERIAVWLRRALYSTVALLLSCASVIPFSKGHSLHAYAEPFGRLLVYLSMALLVVFVYCTGLFWSAWQALRDVEKGQE
Ga0187862_105625111	3300018040	Peatland	EEIVGVRHYAREGIGLWRKRSIYSAVVFLLSCASVYPFLEGHALHKYWESFGKYLILVSMALLVACVYRTELFWSGWQALRDVEKRQA
Ga0187871_100777832	3300018042	Peatland	MTIFDAESPLSDEEIVEVRQYARERIGLWRKRSLYSTVALLLSCGFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGLFWSEWQALRDVEKGQT
Ga0187887_103525751	3300018043	Peatland	DADASLSDEEMIEVRQYAAECIGLWRKRSLYSIGTLLLSCASVYPFLEGHTLHKYWESFGKYLLLVSMVLLVVFVYCTGLFWSAWQALRDVEKGQT
Ga0187859_104631712	3300018047	Peatland	MMIFDTEGPLSDEEMGEVRQYAKERIGLWRRRSLYSTVALLASFACVYPFLYGNLLHKYWDSFGKYLILVSMTLLVVFVYCTGLYWSAWQALRDVEKGQM
Ga0210407_101535422	3300020579	Soil	MLTIFDSESPLSDHEMLEVRQYARERIALWRKRALYSTVALLLSCASVIPFSKGHSLHAHAEPFGRLLVYLSMALLVVFVVCTGFFYSAWQALRDVEKGQG
Ga0210403_101788824	3300020580	Soil	MPTIFDSESPLSKQEMLEVRQHAKEHIGLWRGRSIYSTVALLLSCASVYPFLEGHPLHQYWESFGKYLVLLSMAMLVVFILCTGFFYSAWQALRDVEKGQR
Ga0210401_100179533	3300020583	Soil	MLTIFDSESPLSEQEMLEVREYAKERIGVWRRRSIYSTVALLLSCASVYPFLEGHPLHQYWESFGKYLVPLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG
Ga0210406_1000991314	3300021168	Soil	MPTIFDSESPLSEQEMLEVREYAKERIRLWRRHSIYSVVALLASCASVIPFSKGHSLHAHAEPFGRLLVLLSMGMLVAFVLSAGFFYSAWQALRDVERGQG
Ga0210400_1000100018	3300021170	Soil	MPTIFDSESPLGDQEMLEVRQYAKEHICLWRRRSIYSTVALLLSCASVYPFLKGHPLHQYWKSFGRYLVLLSMAMLVVFVLCTGFFYSAWQALRDVEKGQR
Ga0210400_100092914	3300021170	Soil	MPTIFDSERPLSDHEMLEVRQYARERIGLWRKRALYSTVALLLSCASVIPFSKGHSLHAHAEPFGRLLVYLSMALLVVFVLCTGFFYSAWQALRDVEKGQG
Ga0210400_108866112	3300021170	Soil	PLSDQDVLEVRQYAKERIGLWRKRSIYSTVALLLSCASVYPFLKGHPLHEHWESSGIYLVLLSMALLVAFVLCTGFFYSA
Ga0210396_111228591	3300021180	Soil	MPTIFDSESPLSEQEMLEVREYAKERIRLWRRRSIYSVVALLASCASVIPFSKGHSLHAHAEPFGRLLVLLSMGMLVAFVLSAGFFYSAWQALRDVEKGQG
Ga0210388_101817121	3300021181	Soil	MLTIFDSESPLSEQEMLEVREYAKERIGLWRRRSIYSTVALLLSCASVYPFLEGHPLHQYWESFGKYLVLLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG
Ga0210388_104119312	3300021181	Soil	MRDMLAIFDAESPLSDEEMLEVREYAKERIGLWRRRSIYSVAALLASCASVVPFSKGHSLHAHAEPFGRLLVVLSMGLLVVFVLCTGFFYSAWQALRDVEKGQL
Ga0210388_104749471	3300021181	Soil	MLTIFDEERPLSDEEMSDVRQYAAERIAVWRMRSLYSIVALLLSCASVIPFSKGHDLHAYAEPFGRLLVYLSMAMLAVFVLCTGFWYSAWQALRDVEKGQV
Ga0210385_112154931	3300021402	Soil	MGSVMTIFDAESPLSDEEIVEVRQYARERIGLWRQRSLYSVVALLLSCASVIPFSKGHSLHAHAEPFGRLLVYLSMALLVVCVYCTGLFWSAWQALRDVEKGQK
Ga0210385_114714911	3300021402	Soil	MLAIFDAESPLSDEEMLEVREYAKERIGLWRRRSIYSVAALLASCASVVPFSKGHSLHAHAEPFGRLLVVLSMGLLVVFVLCTGFFYSAWQALRDVEKGQL
Ga0210383_100233284	3300021407	Soil	MITMPTIFDSESPLSKQEMLEVRQHAKEHIGLWRGRSIYSTVALLLSCASVYPFLEGHPLHQYWESFGKYLVLLSMAMLVVFILCTGFFYSAWQALRDVEKGQR
Ga0210394_110378142	3300021420	Soil	MPTIFDSESPLSKQEMLEVRQHAKEHIGLWRGRSIYSTVALLLSCASVYPFLEGHPLHQYWESFGKYLVLLSMAMLVVFILCTGFFYSAWQALRDVEKG
Ga0210391_100146661	3300021433	Soil	MLTIFDEERPLSDEEMSDVRQYAAERIAVWRMRSLYSIVALLLSCASVIPFSKGHDLHAYAEPFGRLLVYLSMAMLAVFVLCTGFWYSAWQALRDLEKGQV
Ga0210391_100503011	3300021433	Soil	MTIFDAESPLSDEEIVEVRQYARERIGLWRQRSLYSVVALLLSCASVIPFSKGHSLHAHAEPFGRLLVYLSMALLVVCVYCTGLFWSAWQALRDVEKGQK
Ga0210392_100323974	3300021475	Soil	MPTIFDSESPLSEQEMLEVREYAKERIRLWRRHSIYSVVALLASCASVIPFSKGHSLHAHAEPFGRLLVLLSMGMLVAFVLSAGFFYSAWQALRDMERGQG
Ga0210409_101221362	3300021559	Soil	MVTIFDSDSPLSDQDMLEVRQYAKERIGLWRKRSIYSTVALLLSCASVYPFLKGHPLHEHWESFGKYLVLLSMALWVAFVLCTGFFYSA
Ga0212123_101448691	3300022557	Iron-Sulfur Acid Spring	LLMIFDIPEPLNEEEMVEVREYAGERIRLWRRRALCSTVALLLSCAFVCPFLEGHALHKYWESFGKYLVLVSMALLVVFVFCTGLFWSAWQALRDVEKEQTWPR
Ga0224570_1011642	3300022730	Rhizosphere	MTIFDTESPLSDEELVGARQYARERIGLWRKRSLYSTVALLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSMILLVAFVYCTGLFWSAWQALRDVEKGQT
Ga0224569_1135021	3300022732	Rhizosphere	HNNSSSLRLALRRTTVLARAPSLLATEGMMTIFDTESPLSDEELVGARQYARERIGLWRKRSLYSTVALLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSMILLVAFVYCTGLFWSAWQALRDVEKGQT
Ga0224562_10189101	3300022733	Soil	ATEGMMTIFDTESPLSDEELVGARQYARERIGLWRKRSLYSTVALLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSMILLVAFVYCTGLFWSAWQALRDVEKGQT
Ga0208192_11023472	3300025477	Peatland	MTIFDTESPLSDDEIVGVRHYARERIAVWLRRALYSTVALLLSCASVIPFSKGHSLHAYAEPFGRLLVYLSMALLVVFVYCTG
Ga0207700_101728573	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLTMLDSESPLSDQEMLEVRQCAKERIGLWRRRSIYSTVALLLSCASVDPFLKGHPLHEHWESFGKYLVLLSMAMLVVFVLCTGFFYSAWQALRDAEKGQQ
Ga0179587_106010672	3300026557	Vadose Zone Soil	MGDMLTIFDAEGPLSDEEMSEVRQYAAKRIALWRRRSLYSTAALVLICAFIYQFLAGHPLHAYWESFGKYLVFVAMALLVAFVLCAGFFYSAWQALRDVEKGQV
Ga0208238_10103482	3300027072	Forest Soil	MNSIFDTSEEPLSKEELIEVREYANERIRLWRKRSLYSGIALFLSCASVGPFLRGHSLHAHWDSFGKYLVLLSMGLLVVFVYCTGLLWSAWMALRDVTKA
Ga0209008_10329012	3300027545	Forest Soil	MLTVLDSDGPLSDQEMLEVQQYAKERISLWRRRSIRSIVAFLLSCLGTYPFLQGHPLHEYWGAFGKYLVLVSMAMLVVFVFCTGFFYSAWRALREVEKGQR
Ga0209221_10018738	3300027609	Forest Soil	MLTIFDSESPLSNEEMLEVRQFAKERIGLWRRRFVYSIVALVLACASVIPFSKGHSLHAHAEPFGRLLVYLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG
Ga0209528_10186142	3300027610	Forest Soil	MLTIFDSESPLSEQEMLEVREYAKERIGLWRRRSIYSVVALATSCASVIPFSKGHSLHAHAEPFGRLLVLLSMGLLVVFVLCTGFFYSAWQALRDVEKGQG
Ga0209420_10717982	3300027648	Forest Soil	MRDMLTIFDAESPLSDEEMSEVRQYAAGRIAVWRMRSLYSIVALLLSCASVIPFSKGDGLHAYAEPFGRLLVYLSMAMLVVFVLCTGFWYSAWQALRDVEKGQL
Ga0209420_11552971	3300027648	Forest Soil	CRMLTIFDSESPLSNEEMLEVRQFAKERIGLWRRRFVYSIVALVLACASVIPFSKGHSLHAHAEPFGRLLVYLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG
Ga0209333_10040921	3300027676	Forest Soil	FDSESPLSNEEMLEVRQFAKERIGLWRRRFVYSIVALVLACASVIPFSKGHSLHAHAEPFGRLLVYLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG
Ga0209333_10648481	3300027676	Forest Soil	MLTIFDFRSPPSNEEMLEVRQYAKERIGLWRRRSIYSTIAFLLSCAGVYPFLQGHPLHHYWESFGKYLVLLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG
Ga0209446_11226131	3300027698	Bog Forest Soil	FDTESPLSDEEIVGVRQYARERIGLWRKRALYSTVAFLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGLFWSAWQALRDVEKGQT
Ga0209772_100520703	3300027768	Bog Forest Soil	MMTIFDSESPLSDQEMLEVREYAEERIGLWRKRSIYSVVAVLASCACVIPFSKGHSLHSHAEPFGRLLVLLSIGLLVVFVLCAGFFYSA
Ga0209772_101648401	3300027768	Bog Forest Soil	MLTIFDSDSPLSHQEMLEVREYARERIGLWRKRFLYSTVALLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSTTLFLVFVYCTGLFWAAWQALRDVEKGQG
Ga0209274_102324362	3300027853	Soil	MLTIFDEESPLSDEEMSDVRQYAAGRIAVWPMRSLYSIVALLLSCASVIPFSKGHDRHAYAEPFGRLLVYLSRAMLVVFVLCTGFWYSAWQALRDVEKGQL
Ga0209275_101175891	3300027884	Soil	VSVTDSVNHGPSQVHCLAYGHGPLVTMLTIFDSESPLSEQEMLEVREYAKERIGVWRRRSIYSTVALLLSCASVYPFLEGHPLHQYWESFGKYLVPLSMAMLVVFVLCTGFFYSAWQALRDVEKGQG
Ga0209624_108700751	3300027895	Forest Soil	GVQQYAKERISLWRRRSIRSIVAFLLSCLGTYPFLQGHPLHEYWGAFGKYLVLVSMAMLVVFVFCTGFFYSAWRALREVEKGQR
Ga0209526_102675861	3300028047	Forest Soil	HIGHGPLVTMLTIFDSESPLSEQEMLEVREYAKERIGLWRRRSIYSVVALATSCASVIPFSKGHSLHAHAEPFGRLLVLLSMGLLVVFVLCTGFFYSAWQALRDVEKGQG
Ga0137415_113783371	3300028536	Vadose Zone Soil	MTIFDSESPLTDEEMLEVRQYARKRIDLWRRRALYSVGALLLSCALVIPFSKGHSLHAYFEPFGKLLVCLSMALLVVCVLRTGFFWSAWQALRDVEKGET
Ga0265461_105184372	3300030743	Soil	MIVPAKAPERLATEGVMTIFDAESPLSDEEIVEVRQYARERIGLWRKRSLYSTVALVLSCGFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGLFWSAWQALR
Ga0302323_1026724251	3300031232	Fen	LTIFDAESPLSDEEMSEVRQYAAEQIAVWRRRSLYSTAALVLTCAFIYPFLADHPLHVYWESFGKYLIFVAMALLIVFVLCTGFFYSAWQALRDVEKGQV
Ga0302325_104817001	3300031234	Palsa	MLTIFDAESPLSDEEMSDVRQYAAERIAAWRSRSLYSTAALALTCAFIYPFLVGHSLHKYWESFGKYLIFVAMALLVVFVLCIGFWYSASQALRDVDKGQP
Ga0302140_111600881	3300031261	Bog	MTIFDAERPLSDEEIVGVRQYARERIGLWRKRSLYSTVALLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGVFWSAWQALR
Ga0302320_101713512	3300031524	Bog	MTIFDAERPLSDEEIVGVRQYARERIGLWRKRSLYSTVALLLSCAFVYPFLEGHPLHKYWESFGKYLIIVSMTLLVVFVYCTGVFWSAWQALRDVEKGQT
Ga0307479_105312142	3300031962	Hardwood Forest Soil	MTISDTEPPLSDEEMAEVREYASERIGLWRKRSLYSIVACLLSCASVIPFSKGHSLHAHSEPFGRLLVYLSMALFVLCVYCTGLLWSAWQALRDVEKGQT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089289

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences