Metagenome / Metatranscriptome Family F089216

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089216
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	58 residues
Representative Sequence	NSGNMGAEGDPPLALRKSIDKGMAPNSAGRHVNYVEIYEPDVLADDMQPVLRYGASLFGR
Number of Associated Samples	83
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.94 %
% of genes near scaffold ends (potentially truncated)	86.24 %
% of genes from short scaffolds (< 2000 bps)	76.15 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.468 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (11.009 % of family members)
Environment Ontology (ENVO)	Unclassified (31.193 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.055 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.36% β-sheet: 0.00% Coil/Unstructured: 63.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF07690	MFS_1	4.59
PF00232	Glyco_hydro_1	2.75
PF12680	SnoaL_2	1.83
PF07494	Reg_prop	1.83
PF07883	Cupin_2	1.83
PF04366	Ysc84	1.83
PF02368	Big_2	0.92
PF12833	HTH_18	0.92
PF00872	Transposase_mut	0.92
PF01571	GCV_T	0.92
PF00248	Aldo_ket_red	0.92
PF13810	DUF4185	0.92
PF12852	Cupin_6	0.92
PF05988	DUF899	0.92
PF01336	tRNA_anti-codon	0.92
PF01381	HTH_3	0.92
PF14023	DUF4239	0.92
PF00498	FHA	0.92
PF14534	DUF4440	0.92
PF00753	Lactamase_B	0.92
PF03330	DPBB_1	0.92
PF00171	Aldedh	0.92
PF13365	Trypsin_2	0.92
PF07859	Abhydrolase_3	0.92
PF00072	Response_reg	0.92
PF13191	AAA_16	0.92
PF00860	Xan_ur_permease	0.92
PF00873	ACR_tran	0.92
PF13561	adh_short_C2	0.92
PF12975	DUF3859	0.92
PF03551	PadR	0.92
PF05598	DUF772	0.92
PF08388	GIIM	0.92
PF01041	DegT_DnrJ_EryC1	0.92
PF03781	FGE-sulfatase	0.92
PF16868	NMT1_3	0.92
PF07833	Cu_amine_oxidN1	0.92
PF00665	rve	0.92
PF00557	Peptidase_M24	0.92
PF00463	ICL	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	2.75
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	1.83
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	1.83
COG2224	Isocitrate lyase	Energy production and conversion [C]	0.92
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.92
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.92
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.92
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.92
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.92
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.92
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.92
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.92
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.92
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.92
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.92
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.92
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.92
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.92
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.92
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.92
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.92
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.92
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.47 %
Unclassified	root	N/A	38.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.47 %
Unclassified	root	N/A	38.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.47 %
Unclassified	root	N/A	38.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.75 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.75 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.83 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.92 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.34 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.75 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.83 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.92 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.92 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.34 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.83 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.92 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	0.92 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.92 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.92 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.34 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.92 %
Acaryochloridaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae	0.92 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	0.92 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.92 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	0.92 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.92 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.92 %
unclassified Desulfuromonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → unclassified Desulfuromonadales	0.92 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.34 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.92 %
Desulfuromonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → unclassified Desulfuromonadales → Desulfuromonadales bacterium	0.92 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.92 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.92 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.92 %
Acaryochloris	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris	0.92 %
Nannocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae	0.92 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	0.92 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.34 %
Granulicella sp. S156	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	0.92 %
Nannocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis	0.92 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.92 %
Micromonospora chersina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	0.92 %
Acaryochloris marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris → Acaryochloris marina	0.92 %
Desulfuromonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → unclassified Desulfuromonadales → Desulfuromonadales bacterium	0.92 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.92 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	0.92 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.34 %
Nannocystis exedens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	0.92 %
Granulicella sp. S156	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	0.92 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.92 %
Micromonospora chersina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	0.92 %
Acaryochloris marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris → Acaryochloris marina	0.92 %
Desulfuromonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → unclassified Desulfuromonadales → Desulfuromonadales bacterium	0.92 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.92 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	0.92 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101787323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	515	Open in IMG/M
3300004092\|Ga0062389_101681131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	816	Open in IMG/M
3300004092\|Ga0062389_102558172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300004635\|Ga0062388_102359736	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005467\|Ga0070706_100449126	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300005533\|Ga0070734_10202263	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300005537\|Ga0070730_11004190	Not Available	520	Open in IMG/M
3300005610\|Ga0070763_10922340	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005712\|Ga0070764_10723739	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005764\|Ga0066903_106873836	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005994\|Ga0066789_10000380	All Organisms → cellular organisms → Bacteria → Proteobacteria	17254	Open in IMG/M
3300005994\|Ga0066789_10004796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	5955	Open in IMG/M
3300005994\|Ga0066789_10026424	All Organisms → cellular organisms → Bacteria	2572	Open in IMG/M
3300006041\|Ga0075023_100491118	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300006059\|Ga0075017_101639508	Not Available	508	Open in IMG/M
3300006162\|Ga0075030_100756011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	768	Open in IMG/M
3300006162\|Ga0075030_100789745	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300006176\|Ga0070765_100040368	All Organisms → cellular organisms → Bacteria	3731	Open in IMG/M
3300006176\|Ga0070765_102274920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300006642\|Ga0075521_10358576	Not Available	706	Open in IMG/M
3300009523\|Ga0116221_1243366	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300009525\|Ga0116220_10116807	Not Available	1136	Open in IMG/M
3300009547\|Ga0116136_1109145	Not Available	716	Open in IMG/M
3300009640\|Ga0116126_1030364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2273	Open in IMG/M
3300009640\|Ga0116126_1078976	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	1211	Open in IMG/M
3300009698\|Ga0116216_10168432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300009824\|Ga0116219_10687086	Not Available	560	Open in IMG/M
3300010339\|Ga0074046_10013724	All Organisms → cellular organisms → Bacteria	5883	Open in IMG/M
3300010341\|Ga0074045_10009395	All Organisms → cellular organisms → Bacteria	8200	Open in IMG/M
3300010341\|Ga0074045_10045655	All Organisms → cellular organisms → Bacteria	3200	Open in IMG/M
3300010343\|Ga0074044_10150963	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300010343\|Ga0074044_10486342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300010343\|Ga0074044_11159303	Not Available	504	Open in IMG/M
3300010362\|Ga0126377_10624093	Not Available	1124	Open in IMG/M
3300010379\|Ga0136449_101073799	All Organisms → cellular organisms → Bacteria → Acidobacteria	1285	Open in IMG/M
3300010379\|Ga0136449_101094357	All Organisms → cellular organisms → Bacteria → Acidobacteria	1269	Open in IMG/M
3300010379\|Ga0136449_104339833	Not Available	524	Open in IMG/M
3300014501\|Ga0182024_10776917	Not Available	1171	Open in IMG/M
3300014501\|Ga0182024_10900502	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300017924\|Ga0187820_1014390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1934	Open in IMG/M
3300017927\|Ga0187824_10019216	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300017932\|Ga0187814_10318853	Not Available	597	Open in IMG/M
3300017933\|Ga0187801_10041271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1654	Open in IMG/M
3300017934\|Ga0187803_10270276	Not Available	675	Open in IMG/M
3300017942\|Ga0187808_10482021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	573	Open in IMG/M
3300017943\|Ga0187819_10058549	Not Available	2288	Open in IMG/M
3300017955\|Ga0187817_10731009	Not Available	631	Open in IMG/M
3300017970\|Ga0187783_11041159	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300017975\|Ga0187782_10361396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1100	Open in IMG/M
3300017975\|Ga0187782_10775989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300017975\|Ga0187782_11221307	Not Available	588	Open in IMG/M
3300018005\|Ga0187878_1249967	Not Available	646	Open in IMG/M
3300018008\|Ga0187888_1104750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1201	Open in IMG/M
3300018009\|Ga0187884_10146359	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → unclassified Desulfuromonadales → Desulfuromonadales bacterium	998	Open in IMG/M
3300018019\|Ga0187874_10255602	Not Available	718	Open in IMG/M
3300018058\|Ga0187766_10099638	All Organisms → cellular organisms → Bacteria → Acidobacteria	1761	Open in IMG/M
3300018058\|Ga0187766_10608034	All Organisms → cellular organisms → Bacteria → Proteobacteria	747	Open in IMG/M
3300018058\|Ga0187766_11071106	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300018058\|Ga0187766_11227491	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300018064\|Ga0187773_11195219	Not Available	511	Open in IMG/M
3300018085\|Ga0187772_11165822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300018086\|Ga0187769_10738888	Not Available	744	Open in IMG/M
3300018090\|Ga0187770_10058221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris → Acaryochloris marina	2801	Open in IMG/M
3300020582\|Ga0210395_10420442	Not Available	1005	Open in IMG/M
3300020582\|Ga0210395_10622448	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300021420\|Ga0210394_10010423	All Organisms → cellular organisms → Bacteria	9230	Open in IMG/M
3300021432\|Ga0210384_10965656	Not Available	753	Open in IMG/M
3300021478\|Ga0210402_10007602	All Organisms → cellular organisms → Bacteria → Proteobacteria	9489	Open in IMG/M
3300021478\|Ga0210402_11029422	Not Available	750	Open in IMG/M
3300021479\|Ga0210410_11739202	Not Available	517	Open in IMG/M
3300021559\|Ga0210409_10946618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	735	Open in IMG/M
3300022508\|Ga0222728_1069457	Not Available	623	Open in IMG/M
3300022557\|Ga0212123_10198377	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300022557\|Ga0212123_10939695	Not Available	505	Open in IMG/M
3300023101\|Ga0224557_1117586	Not Available	1039	Open in IMG/M
3300025432\|Ga0208821_1013655	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300025480\|Ga0208688_1010729	All Organisms → cellular organisms → Bacteria → Acidobacteria	2641	Open in IMG/M
3300025501\|Ga0208563_1022092	Not Available	1667	Open in IMG/M
3300026291\|Ga0209890_10025169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2304	Open in IMG/M
3300027313\|Ga0207780_1093277	Not Available	503	Open in IMG/M
3300027604\|Ga0208324_1178971	Not Available	569	Open in IMG/M
3300027768\|Ga0209772_10247013	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300027812\|Ga0209656_10140422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300027911\|Ga0209698_10282372	All Organisms → cellular organisms → Bacteria → Proteobacteria	1318	Open in IMG/M
3300028731\|Ga0302301_1052148	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300028798\|Ga0302222_10002109	All Organisms → cellular organisms → Bacteria → Acidobacteria	9558	Open in IMG/M
3300029636\|Ga0222749_10580989	Not Available	611	Open in IMG/M
3300029910\|Ga0311369_11394894	Not Available	531	Open in IMG/M
3300030007\|Ga0311338_11441606	Not Available	638	Open in IMG/M
3300030503\|Ga0311370_10874017	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300030693\|Ga0302313_10073442	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300030739\|Ga0302311_10368045	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300031027\|Ga0302308_10253443	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300031236\|Ga0302324_102816058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300031708\|Ga0310686_100809483	Not Available	2994	Open in IMG/M
3300031708\|Ga0310686_108407887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1105	Open in IMG/M
3300031708\|Ga0310686_112390724	All Organisms → cellular organisms → Bacteria → Acidobacteria	1601	Open in IMG/M
3300031708\|Ga0310686_113284306	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300031708\|Ga0310686_115617225	Not Available	554	Open in IMG/M
3300031879\|Ga0306919_10871148	Not Available	691	Open in IMG/M
3300032160\|Ga0311301_10101787	All Organisms → cellular organisms → Bacteria	5608	Open in IMG/M
3300034163\|Ga0370515_0005122	All Organisms → cellular organisms → Bacteria	6461	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.81%
Aquatic	Environmental → Aquatic	31.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.63%
Freshwater	Environmental → Aquatic → Freshwater	23.85%
Peat	Environmental → Terrestrial → Peat	9.17%
Sediment	Environmental → Aquatic → Sediment	5.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	23.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.17%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.50%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.51%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.34%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.50%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	11.01%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.17%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.34%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.42%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	6.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.59%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.67%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1017873231	3300002245	Forest Soil	ASRVMGAEGNPPLALRRSIDKGMAPNPAGRHVNYLEIYVADVVPVEMQPVLSYAASLFQH
Ga0062389_1016811311	3300004092	Bog Forest Soil	MGAEGNPALALKKSIDIGTQPNATGQRANYLEIYQPDVVANDLQPVLRDAVSLFK*
Ga0062389_1025581721	3300004092	Bog Forest Soil	PGMGDPGDPPLALRKIIDKAMQPNNAGERINYLEIYEPDIVATDMQPVLKYGASQWARR*
Ga0062388_1023597362	3300004635	Bog Forest Soil	AEGNPALALKKSIDIGMEPNSTGQRINYLEIYQPDVVADDLQPVLRDGASLFK*
Ga0070706_1004491261	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SKVMGAEGDPPLALRRSIDKGMARNSRGRHVNYLEIYAADVEPAAMQPVLQYAAQLFTASSH*
Ga0070734_102022631	3300005533	Surface Soil	MGAVGNPPLALQKSIEKGMAPNKAGRHVNYLEIYEGDVLAPTMQPVLHNAASLF*
Ga0070730_110041902	3300005537	Surface Soil	TNNSLRMGAEGDPPQALRKSIDVGMEPGRSGQHVDYLEIYEPDVVADDMQPVLSYAASLFPRKPRSQ*
Ga0070763_109223401	3300005610	Soil	AEGDPPLALRRSIDKGMTPSNAGRHVNYLEIYLADVLPADMQPVLSYAASLFRQ*
Ga0070764_107237391	3300005712	Soil	GAAVMGAEGDPPLALRRSVDKGLEPNSAGRRISYLEIYRNDVLAEDVQPVLQYAASLIGRQ*
Ga0066903_1068738361	3300005764	Tropical Forest Soil	QGRGPSQVMGAEGNPPLALRRSIDKGMAVNGAGRHVNYLEIYEGDVRPADMQPVLQYAASLFRGSHP*
Ga0066789_100003801	3300005994	Soil	SKVMGAEGDPPLALRRSIDKGMARNSGGRHVNYLEIYAADVEPAAMQPVLQYAAQLFTASSH*
Ga0066789_100047961	3300005994	Soil	IASKVMGAEGDPPLALRRSIDKGMARNSGGRHVNYLAIYEGDVLPADMQPVLQYAASLFAR*
Ga0066789_100264241	3300005994	Soil	MGAEADSPLALKRAINKGLEPNSAVQRINYLEIYEPDVLADETQPVLGYGASLFVR*
Ga0075023_1004911182	3300006041	Watersheds	MGAEDDPPLALRKSIDKGMRPNNAGQHVDYLEIYEPDVLAEDMQPVLRYGASLFGR*
Ga0075017_1016395081	3300006059	Watersheds	TCSGALGADGDPATALRKSIDKGMAPNNAGRQVNYLEIHEPDVLADEMQPVLRYGASLFAR*
Ga0075030_1007560112	3300006162	Watersheds	SQCAGPSQVMGAAGNPSLALRKSVDKGMAANSSGRHINFLEIYAGDVLAPDMQPVLQYAGSLFGKSKP*
Ga0075030_1007897451	3300006162	Watersheds	PGPSQIMGAEGDPPLALQRSIDKGMALNSAGQHVDYLEIHIGDVLPVDMQPVLQHTATIFREPHP*
Ga0070765_1000403681	3300006176	Soil	GAEGDPPLALRRSIDKGMARNSGGRHVNYLEIYAADVAPAAMQPVLQYAAQLFAASSH*
Ga0070765_1022749202	3300006176	Soil	GAEGDPPLALKKSINRGMEPNSAGHRVNYLEIYEPDVLADDMQPVLRYGASLFK*
Ga0075521_103585762	3300006642	Arctic Peat Soil	MGAEGNPPLALRKSVDKGMSPNGAGRHIDYLEIYEGDVLADDMQPVLQYATSLFRQHGP*
Ga0116218_11310851	3300009522	Peatlands Soil	RKSIDKGMASNSAGQHVNYLEIHAPDVLADEMQPVLRYGASLFAR*
Ga0116221_12433661	3300009523	Peatlands Soil	AAGNPPLALRKSVDKGMAANSSGRHINFLEIYAGDVLAPDMQPVLQYAASLFRQSRP*
Ga0116220_101168071	3300009525	Peatlands Soil	PTVMGAAGDPALALRKSVDLAMQPNDAGHHIDYLEIYEPDVLADDMQPVLRYAASLFTATREVSH*
Ga0116136_11091452	3300009547	Peatland	RGTCSEEMGAKGDPPLALRRSIDKGMRPNKAGHHVNYLKIYTPDVIADEMQPVLRYGASLFR*
Ga0116126_10303643	3300009640	Peatland	MGAEGDPPLALRKSIDKGMRPNDSGQHVDYLEIYEPDVLADEMQPVLHYGASLFARKQ*
Ga0116126_10789762	3300009640	Peatland	SPLALRKSIDKGMQPNDAARHVNYLEIYEPDVLAEEMQPVLRYGASLFK*
Ga0116216_101684323	3300009698	Peatlands Soil	FGTKPSKVMGAEGDPPLALRRSIDKGMAANSAGLHVNFLEIYAGDVLAPEMQPVLEYGASLFSRSHH*
Ga0116219_106870861	3300009824	Peatlands Soil	PPLALRKSIDKGMRPNDSGQHVNYLEIYEPDVLADEMQPVLRYGASLFARKQ*
Ga0074046_100137241	3300010339	Bog Forest Soil	KIMGAEGNPPLALRRSIDKGMAANNAGRHVSYLQIYEGDVLPADIQPVLQYAASLFRRP*
Ga0074045_100093951	3300010341	Bog Forest Soil	GNPPLALRKSVDKGMAANSSGRHINFLEIYVGDVLAPDMQPVLQYAASLFRRSHP*
Ga0074045_100456551	3300010341	Bog Forest Soil	GNPPLALRKSVDKGMAANSSGRHINFLEIYVGDVLAPDMQPVLQYAASLFGKSKP*
Ga0074044_101425021	3300010343	Bog Forest Soil	LKKSINKGMEPNNAGQHVNYLEIYEPDVLADEMQPVLRYGASLFAQ*
Ga0074044_101509632	3300010343	Bog Forest Soil	ASKVMGAEGDPPLALRRSIDKGMARDGGRHVNYLEIYAADVAPAAMQPVLQYAAQLFAASSH*
Ga0074044_104863422	3300010343	Bog Forest Soil	MGAEGDPPLALRRAIDRGTQPNASGQRINYLEIYEPDILADQMQPVLQYAASLFK*
Ga0074044_111593032	3300010343	Bog Forest Soil	VRESENMGAAGDPPLALRRSIDKGLAPNSAGRHINYLEIYQPDVLAEEMQPVLRYGASRFK*
Ga0126377_106240932	3300010362	Tropical Forest Soil	EGNPPLALRRSIDKGMQPNHAGRHIDYLEIHQEDVLAEEMQPVLRYGASLFVQPSR*
Ga0136449_1010737992	3300010379	Peatlands Soil	CEHNSGNMGAEGDPPLALRRSIDKGMRLNAGRHVDYIEIYEPDVLADDLQLVLRYGASLFK*
Ga0136449_1010943572	3300010379	Peatlands Soil	CEHNSGNMGAEGDPPLALRRSIDKGMRLNAGRHVDYIEIYEPDVLADDLQSVLRYGASLFTR*
Ga0136449_1043398331	3300010379	Peatlands Soil	MGAEGDPPLALRKSIDKGMAPNDAGRHVDFLEIYDSDVIADDMQPVIKYAASLFAPRSDAK*
Ga0181531_102698541	3300014169	Bog	DKGMTPNPAGQHVNYIEIYLPDVLAPEMQPVLEYGAALFAH*
Ga0182024_107769173	3300014501	Permafrost	AGPSQVMGAAGNPPLALRKSVDKGMAANSSGRHINFLEIYEGDVLAPDMQPVLQYAASLFGKSKP*
Ga0182024_109005022	3300014501	Permafrost	MANIGAAGNPALALQESFDIGMQPNASGQHVNYLEVYEPDVLAADLQPVLNKEASLFN*
Ga0187820_10143902	3300017924	Freshwater Sediment	GAAGDPPLALRRSIDKGMAPNPSGRHVDYLEIYVGDVLPADMQPVLSYGASLFHR
Ga0187856_10369373	3300017925	Peatland	LRKSIDKGMAPNIAGKRVKYLEIHEGDVLAHEMQPVLRYGASLFAHQ
Ga0187824_100192163	3300017927	Freshwater Sediment	DSGNMGAPGNPPLALRRALDKGLKPNTAGRRVNYLEVYDPDVLAEQMQTSLRYGASLFKK
Ga0187814_103188532	3300017932	Freshwater Sediment	GAEGDPQLALKKAINRGTQPNSNGYRSNYLEIYETDVLANEMQPMLSYGASLFK
Ga0187801_100412711	3300017933	Freshwater Sediment	NSGNMGAEGDPPLALRKSIDKGMAPNSAGRHVNYVEIYEPDVLADDMQPVLRYGASLFGR
Ga0187803_102702761	3300017934	Freshwater Sediment	IPSKIMGAEGNPPLALRRSIDKGMQPNSGGQHVNYLEIYAADVLADEMQPVLRYGASLFERKQH
Ga0187808_104820212	3300017942	Freshwater Sediment	SQDAIASKVMGAEGDPPLALRRSIDKGMARNSGGRHVNYLEIYAADVAPAAMQPVLQYAAQLFTASSH
Ga0187819_100585493	3300017943	Freshwater Sediment	SCVRNSGNMGAEGDPQLALKKAINRGTQPNSNGYRSNYLEIYETDVLANEMQPMLSYGASLFK
Ga0187817_107310091	3300017955	Freshwater Sediment	PQLALKKAIDRGTQPNGNGYRINYLEVYEPDVLAEKMQPVLRSAASLSGRS
Ga0187783_110411592	3300017970	Tropical Peatland	LPSKIMGAAGDPPLALRRSIDKGMAPNKAGRHVDYLEIYMGDVLPAEMQPTLQYAASLFR
Ga0187782_103613962	3300017975	Tropical Peatland	SCERNSGNMGAEGNPPLALKKSIDIGMYPNATGQHINYLEIYEPDVLADDLQPVLRDAASLFK
Ga0187782_107759891	3300017975	Tropical Peatland	NPPAALRASLDKGMQANSSGQHVNYLEIYEPDVLAGEMQPALEYGASLFERK
Ga0187782_112213071	3300017975	Tropical Peatland	DGNPTLALKRSIEKGMRPNARGQHVNFLEIYDQDIEAEEMQPVLRHAASLF
Ga0187878_12499671	3300018005	Peatland	IASQIMGAEGNPPLALRRSIDKGMAPNSVGRHINYLEIYEGDVLSADMQPVLEYAASLFHQSRP
Ga0187888_11047501	3300018008	Peatland	KCASERGTCSEEMGAKGDPPLALRRSIDKGMRPNKAGHHVNYLKIYTPDVIADEMQPVLRYGASLFR
Ga0187884_101463593	3300018009	Peatland	RTSCERNSGNMGAEGDPPLALKRSIDKGMKPNNAGQHVNYLEIYEPDVLADEMQPVLRYGASLFK
Ga0187874_102556022	3300018019	Peatland	MGAKGNPPLALRRSIDMGMKLNKTGHHVNYLEIYEADVLADEMLPVLRYGASLFK
Ga0187766_100996384	3300018058	Tropical Peatland	GDPQLALKKAIDRGTQANTKGYRINYLEIYEPDVLANQMQSVLSYGASLFK
Ga0187766_106080341	3300018058	Tropical Peatland	VRNSGNMGADGDPPLALKRALAKGLQANSAGHHVNYLEIYEPDVLADETQSVLRYGASLF
Ga0187766_110711061	3300018058	Tropical Peatland	MGAEGDPPLALRRALDKGLKPNNAGRHVTYLEIYEPDVVADEMQPVLRYGASLFK
Ga0187766_112274911	3300018058	Tropical Peatland	EPSKVMGAEGDPPLALRRSIDKGMGPNNAGRRINFLEIYVGDVLAPEMQPVLQYAASLFRGSHP
Ga0187773_111952191	3300018064	Tropical Peatland	GAKPSEIMGAAGDPPLALRRSIDKGMAPNGAGHRVNYLEIYQADVVATDMQTVLQYAASLFSQSRPR
Ga0187772_111658222	3300018085	Tropical Peatland	MGAAGNPPLALKKSIDKGMAPNGAGHHVNYLEIYEGDVLPPSMQATLQYGVSLFRD
Ga0187769_107388881	3300018086	Tropical Peatland	LALKKSIDIGMQPNATGQHINYLEIYEPDVLADDLQPVLRDAALLFK
Ga0187770_100582211	3300018090	Tropical Peatland	MGAEGNPALALKKSIDIGMQPNAAGQHINYLEIYEPDVLADDLQPVLRDAALLFK
Ga0210395_104204422	3300020582	Soil	SKVMGAEGDPPLALRRSIDKGMARNSGGRHVNYLEIYAADVAPAAMQPVLQQAAQLFAASRH
Ga0210395_106224481	3300020582	Soil	GNMGAEGDPPLALKKAIQRGMQPNAAGRHVNYLEIYAPDVLADEMQPVLRDGASLFK
Ga0210394_100104238	3300021420	Soil	PSQVMGAAGNPPLALRKSVDKGMAANSSGRHINFLKIYAGDVRAPDMQPVLQYAASLFGKSKP
Ga0210384_109656561	3300021432	Soil	IASKVMGAEGDPPLALRRSIDKGMARNSGGRHVNYLEIYAADVEPAAMQPVLQYAAQLFTASSH
Ga0210402_100076021	3300021478	Soil	GAEGDPPQALRRSIDKGMARNSGGRHVNYLAIYEGDVLPADMQPVLQYAASLFAR
Ga0210402_110294222	3300021478	Soil	EGDPPLALRRSVDKGMARNSGGRHVNYLEIYAADVEPAAMQPVLQYAAQLFTASRH
Ga0210410_117392021	3300021479	Soil	LALRKSIDQGMTPTNVGQRVHYLEIYESDVLADEMHPVLQYAASSFR
Ga0210409_109466182	3300021559	Soil	AEGDPPLALRRSIDKGMARNSGGRHVNYLEIYAADVAPAAMQPVLQYAAQLFAASSH
Ga0222728_10694571	3300022508	Soil	TGPSKVMGAEGNPPLALRKSIDKGMAANKAGRHVNYLEIYEGDVLPADMQPVLRYAASLFRRP
Ga0212123_101983773	3300022557	Iron-Sulfur Acid Spring	GPSQVMGAAGNPPLALRKSVDKGMAANSSGQHINFLEIYVGDVLAPDMQPVLQYAASLFGKSKP
Ga0212123_109396952	3300022557	Iron-Sulfur Acid Spring	RSGSQDAIASKVMGAEGDPPLALRRSIDKGMARNSDGRHVNYLEIYAADVAPAAMQPVLQYAAQMFTASSH
Ga0224557_11175861	3300023101	Soil	LALKKSIDIGMQTNSAGQHINYLEIYEPDVLADDLQPVLRNGAALFK
Ga0208821_10136553	3300025432	Peatland	GPSQVMGAAGNPPLALRKSVDKGMAANSSGRHINFLEIYVGDVLAPDMQPVLQYAASLFGKSKP
Ga0208039_10271891	3300025454	Peatland	LALRRSIDKGMRPNKAGHHVNYLKIYTPDVIADEMQPVLRYGASLFR
Ga0208688_10107293	3300025480	Peatland	GAEGNPPAALRKSIDKGMAPNIAGKRVKYLEIHEGDVLAHEMQPVLRYGASLFAHQ
Ga0208563_10220923	3300025501	Peatland	ELGTCSEWMGAKGNPPLALRRSIDMGMKLNKTGHHVNYLEIYEADVLADEMLPVLRYGASLFK
Ga0209890_100251693	3300026291	Soil	MGAEGDPPLALRRSIDKGMARNSGGRHVNYLEIYAADVEPAAMQPVLQYAAQLFTASSH
Ga0207780_10932771	3300027313	Tropical Forest Soil	VRNSGNMGAEGDPPLALKRAIERGTQPNNHGQRINYLEIYAPDVLAGQMQPVLSSAAALW
Ga0208324_11789711	3300027604	Peatlands Soil	SQKMGAPGNPPLALRRSIDLAMQPNSTGQHVNFVEIYEPDVLPADMQPVLRYGASLFAASKPEGHSP
Ga0209422_11085331	3300027629	Forest Soil	LRRSIDKGIKPNKAGQHVNYLEIYKPDVLADEMQPVLRYAASLFAQ
Ga0209772_102470132	3300027768	Bog Forest Soil	RTSAKNAPDAMGAPGDPPLALRKSIDKGMRPNNAGHTVNYLEIYEPDVVADEMQPVLRYGASLFAR
Ga0209656_101404221	3300027812	Bog Forest Soil	PSQVMGAAGNPPLALRKSVDKGMAANSSGRHINFLEIYVGDVLAPDMQPVLQYAASLFGKSKP
Ga0209698_102823722	3300027911	Watersheds	MGAEGDPPLALRRSIDKGMTPNNAGRRINYLQIYVADVLPADMQPVPSYAASLFRQ
Ga0209698_103688241	3300027911	Watersheds	PLALQRSIDKGMALNSAGQHVDYLEIHIGDVLPVDMQPVLQHTATIFREPHP
Ga0302301_10521482	3300028731	Palsa	SCERNSGNMGAEGDPPLALKKTINRGMEPNSAGHRVNYLEIYEPDVLADDMQPVLRYGASLFK
Ga0302222_100021091	3300028798	Palsa	DPPLALKKTINRGMEPNSAGHRVNYLEIYEPDVVADDMQPVLRYAASFFK
Ga0222749_105809891	3300029636	Soil	DPPSLTLRKTIDKGMRPNDAGQSINYLEIYEPDVLADDLQPALRYAASLFARKHASH
Ga0311369_113948942	3300029910	Palsa	LGTCSAALGAEGDPPLALQKSIAKGMEPNSEGKHIDYLEIYEGDVLADAMQSVLRDGASLFK
Ga0311338_114416061	3300030007	Palsa	NPPLALRRSMDMGMQANSAGQHVNYLEIYEPDVLAEEMQPVLSYGASLFAREPLAHP
Ga0311370_108740171	3300030503	Palsa	ERNSGDMGAEGDPALALKKSIDIGMQPNTAGRRANYLEIYEPDVLGDDLQAVLRDGAALF
Ga0302313_100734421	3300030693	Palsa	EGDPPLALKKSINRGMEPNSAGHRVNYLEIYEPDVLADDMQPVLRYAASLFK
Ga0302311_103680452	3300030739	Palsa	SGNMGAEGDPPLALKKTINRGMEPNSAGHRVNYLEIYEPDVLADDMQPVLRYAASLFK
Ga0302308_102534431	3300031027	Palsa	NSGNMGAEGDPPLALKKTINRGMEPNSAGHRVNYLEIYEPDVLADDMQPVLRYAASLFK
Ga0302324_1028160582	3300031236	Palsa	SGNMGAEGDPPLALKKTINRGMEPNSAGHRVNYLEIYEPDVLADDMQPVLRYGASLFK
Ga0310686_1008094831	3300031708	Soil	MGAAGNPPLALRKSVDKGMAANSSGRHINFLEIYAGDVLAPEMQPVLQYAASLFGKSKP
Ga0310686_1084078872	3300031708	Soil	MGAEGDPPLALRRSIDKGMALNDAGRHVNYLEIYAADVLPADMQPVLQYAASLFGRPHP
Ga0310686_1123907241	3300031708	Soil	PGMGDPGDPPLALRKTIDKGMQPNSAGQHINYLEIYEPDVLADDMQPVLRYGASLFARK
Ga0310686_1132843063	3300031708	Soil	PGMGDPGDPPLALRKTIDKGMQPNSAGQHINYLEIYEPDVLANDMQPVLRYGASLFARK
Ga0310686_1156172251	3300031708	Soil	DTTVVLRPQQMGAESDPPLALRKSIDKGMRPNDSGQHVTYLEIYETDVLADEMQPVLRYGASLFARKQ
Ga0306919_108711481	3300031879	Soil	IMGAEGDPPLALRRSIDKGMAPNKAGRRINYLEIYMGDVLPAEMQPVLQYAASLFRGSAP
Ga0311301_1010178710	3300032160	Peatlands Soil	SCEHNSGNMGAEGDPPLALRRSIDKGMRLNAGRHVDYIEIYEPDVLADDLQLVLRYGASLFK
Ga0370515_0005122_6286_6453	3300034163	Untreated Peat Soil	MGAEGDPPLALKKTINRGMEPNSAGHRVNYLEIYEPDVLADDMQPVLRYGASLFK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089216

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences