Metagenome / Metatranscriptome Family F089210

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089210
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	67 residues
Representative Sequence	MSALMERRLRISGMLIVLGLLVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSPPES
Number of Associated Samples	71
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.57 %
% of genes near scaffold ends (potentially truncated)	22.02 %
% of genes from short scaffolds (< 2000 bps)	68.81 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.734 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.275 % of family members)
Environment Ontology (ENVO)	Unclassified (35.780 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.229 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.70% β-sheet: 0.00% Coil/Unstructured: 38.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF03264	Cytochrom_NNT	24.77
PF13442	Cytochrome_CBB3	16.51
PF13545	HTH_Crp_2	2.75
PF08240	ADH_N	2.75
PF13435	Cytochrome_C554	1.83
PF13620	CarboxypepD_reg	1.83
PF02566	OsmC	1.83
PF13607	Succ_CoA_lig	1.83
PF00070	Pyr_redox	0.92
PF08447	PAS_3	0.92
PF00069	Pkinase	0.92
PF04828	GFA	0.92
PF00067	p450	0.92
PF05227	CHASE3	0.92
PF09900	DUF2127	0.92
PF00596	Aldolase_II	0.92
PF02276	CytoC_RC	0.92
PF00196	GerE	0.92
PF00582	Usp	0.92
PF01152	Bac_globin	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3005	Tetraheme cytochrome c subunit NapC of nitrate or TMAO reductase	Energy production and conversion [C]	24.77
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.67
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.83
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.83
COG2124	Cytochrome P450	Defense mechanisms [V]	0.92
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.92
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.73 %
Unclassified	root	N/A	19.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.73 %
Unclassified	root	N/A	19.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.73 %
Unclassified	root	N/A	19.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.54 %
Unclassified	root	N/A	19.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.28 %
Unclassified	root	N/A	19.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.28 %
Unclassified	root	N/A	19.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.28 %
Unclassified	root	N/A	19.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.28 %
Unclassified	root	N/A	19.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.28 %
Unclassified	root	N/A	19.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10366552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300001867\|JGI12627J18819_10338385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300004139\|Ga0058897_10051745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1362	Open in IMG/M
3300004295\|Ga0068932_1327740	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300004631\|Ga0058899_10234215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300005534\|Ga0070735_10235416	All Organisms → cellular organisms → Bacteria → Acidobacteria	1113	Open in IMG/M
3300005534\|Ga0070735_10460219	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005537\|Ga0070730_10654560	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300005538\|Ga0070731_10065470	All Organisms → cellular organisms → Bacteria	2413	Open in IMG/M
3300005538\|Ga0070731_10348989	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005538\|Ga0070731_10380717	Not Available	938	Open in IMG/M
3300005541\|Ga0070733_10133623	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300005541\|Ga0070733_10244129	All Organisms → cellular organisms → Bacteria → Acidobacteria	1180	Open in IMG/M
3300005542\|Ga0070732_10287489	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300005542\|Ga0070732_10369975	Not Available	863	Open in IMG/M
3300005542\|Ga0070732_10720623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300005557\|Ga0066704_10003035	All Organisms → cellular organisms → Bacteria	7988	Open in IMG/M
3300005586\|Ga0066691_10144050	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300005591\|Ga0070761_10346090	Not Available	900	Open in IMG/M
3300005921\|Ga0070766_10014932	All Organisms → cellular organisms → Bacteria	4045	Open in IMG/M
3300006052\|Ga0075029_101083693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300006176\|Ga0070765_100120581	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300006755\|Ga0079222_10001793	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6292	Open in IMG/M
3300006755\|Ga0079222_10014956	All Organisms → cellular organisms → Bacteria	2950	Open in IMG/M
3300006794\|Ga0066658_10477754	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300006797\|Ga0066659_10165281	All Organisms → cellular organisms → Bacteria → Acidobacteria	1587	Open in IMG/M
3300006804\|Ga0079221_10000956	All Organisms → cellular organisms → Bacteria	8835	Open in IMG/M
3300006806\|Ga0079220_10658214	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300010376\|Ga0126381_100207706	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300011086\|Ga0138564_1136112	All Organisms → cellular organisms → Bacteria → Acidobacteria	1369	Open in IMG/M
3300011120\|Ga0150983_10234207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1192	Open in IMG/M
3300011120\|Ga0150983_11130189	Not Available	666	Open in IMG/M
3300011120\|Ga0150983_13780652	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300011120\|Ga0150983_15579540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300014495\|Ga0182015_10989752	Not Available	522	Open in IMG/M
3300014501\|Ga0182024_10202712	All Organisms → cellular organisms → Bacteria → Acidobacteria	2710	Open in IMG/M
3300017927\|Ga0187824_10001216	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6284	Open in IMG/M
3300017927\|Ga0187824_10008583	All Organisms → cellular organisms → Bacteria → Proteobacteria	2908	Open in IMG/M
3300017972\|Ga0187781_10152848	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300017994\|Ga0187822_10021537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1653	Open in IMG/M
3300020579\|Ga0210407_10630209	Not Available	834	Open in IMG/M
3300020580\|Ga0210403_10051890	All Organisms → cellular organisms → Bacteria	3279	Open in IMG/M
3300020581\|Ga0210399_10018445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5523	Open in IMG/M
3300020581\|Ga0210399_10069371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2853	Open in IMG/M
3300020583\|Ga0210401_10224632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1736	Open in IMG/M
3300020583\|Ga0210401_10246336	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300020583\|Ga0210401_11585711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300021046\|Ga0215015_10434032	All Organisms → cellular organisms → Bacteria → Acidobacteria	10038	Open in IMG/M
3300021046\|Ga0215015_10799511	Not Available	721	Open in IMG/M
3300021168\|Ga0210406_10053606	All Organisms → cellular organisms → Bacteria	3519	Open in IMG/M
3300021170\|Ga0210400_10414320	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300021171\|Ga0210405_10077709	All Organisms → cellular organisms → Bacteria	2615	Open in IMG/M
3300021171\|Ga0210405_10506446	Not Available	946	Open in IMG/M
3300021171\|Ga0210405_10709846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300021178\|Ga0210408_10137302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1933	Open in IMG/M
3300021178\|Ga0210408_10515822	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300021180\|Ga0210396_10522804	Not Available	1037	Open in IMG/M
3300021420\|Ga0210394_10001743	All Organisms → cellular organisms → Bacteria	32953	Open in IMG/M
3300021420\|Ga0210394_10016588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6960	Open in IMG/M
3300021420\|Ga0210394_10029641	All Organisms → cellular organisms → Bacteria	4936	Open in IMG/M
3300021420\|Ga0210394_10038312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4251	Open in IMG/M
3300021420\|Ga0210394_10288799	Not Available	1438	Open in IMG/M
3300021420\|Ga0210394_11151123	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300021420\|Ga0210394_11184186	Not Available	656	Open in IMG/M
3300021432\|Ga0210384_10099634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2607	Open in IMG/M
3300021432\|Ga0210384_10117368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2386	Open in IMG/M
3300021475\|Ga0210392_10951884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300021476\|Ga0187846_10004734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7015	Open in IMG/M
3300021476\|Ga0187846_10228549	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300021477\|Ga0210398_11095069	Not Available	633	Open in IMG/M
3300021478\|Ga0210402_10738572	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300021479\|Ga0210410_10057814	All Organisms → cellular organisms → Bacteria	3384	Open in IMG/M
3300021559\|Ga0210409_10013706	All Organisms → cellular organisms → Bacteria	8052	Open in IMG/M
3300021559\|Ga0210409_10351780	Not Available	1324	Open in IMG/M
3300021559\|Ga0210409_10397138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300021559\|Ga0210409_11561115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300022532\|Ga0242655_10094170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300025164\|Ga0209521_10667675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300026529\|Ga0209806_1304604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300027376\|Ga0209004_1001373	All Organisms → cellular organisms → Bacteria	2847	Open in IMG/M
3300027565\|Ga0209219_1023875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507	Open in IMG/M
3300027725\|Ga0209178_1010602	All Organisms → cellular organisms → Bacteria	2882	Open in IMG/M
3300027765\|Ga0209073_10074731	Not Available	1158	Open in IMG/M
3300027853\|Ga0209274_10471482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300027867\|Ga0209167_10087428	All Organisms → cellular organisms → Bacteria → Acidobacteria	1578	Open in IMG/M
3300027869\|Ga0209579_10146178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1259	Open in IMG/M
3300027869\|Ga0209579_10318942	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300027869\|Ga0209579_10371877	Not Available	774	Open in IMG/M
3300031057\|Ga0170834_103736983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300031231\|Ga0170824_122461713	Not Available	895	Open in IMG/M
3300031234\|Ga0302325_10070913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6746	Open in IMG/M
3300031236\|Ga0302324_100509067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1755	Open in IMG/M
3300031474\|Ga0170818_106338672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300031708\|Ga0310686_102226358	Not Available	532	Open in IMG/M
3300031715\|Ga0307476_10458736	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300031720\|Ga0307469_10915652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300031753\|Ga0307477_10001585	All Organisms → cellular organisms → Bacteria → Acidobacteria	18815	Open in IMG/M
3300031753\|Ga0307477_10144865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1657	Open in IMG/M
3300031753\|Ga0307477_10968611	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300031754\|Ga0307475_10119987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2070	Open in IMG/M
3300031823\|Ga0307478_10778466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300031823\|Ga0307478_10812818	Not Available	783	Open in IMG/M
3300031823\|Ga0307478_11735204	Not Available	514	Open in IMG/M
3300031962\|Ga0307479_10047384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4131	Open in IMG/M
3300032180\|Ga0307471_100129034	All Organisms → cellular organisms → Bacteria → Proteobacteria	2378	Open in IMG/M
3300032180\|Ga0307471_100156477	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300032180\|Ga0307471_100617388	Not Available	1244	Open in IMG/M
3300032180\|Ga0307471_101627318	Not Available	801	Open in IMG/M
3300032783\|Ga0335079_11606565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.33%
Aquatic	Environmental → Aquatic	3.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.66%
Freshwater	Environmental → Aquatic → Freshwater	2.75%
Peat	Environmental → Terrestrial → Peat	1.83%
Cave	Environmental → Terrestrial → Cave	1.83%
Sediment	Environmental → Aquatic → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.15%
Loam	Environmental → Terrestrial → Soil → Loam	12.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.28%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	13.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	12.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.83%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004295	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011086	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103665523	3300001593	Forest Soil	MAALMERRLRISGMLIVLGLVVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSPSES*
JGI12627J18819_103383852	3300001867	Forest Soil	MAALMERRLRISGILIVLGLLVEALSLIRIHPLAFLAFMFIGGGFLIAGMGIYLYAIASASSPPG*
Ga0058897_100517452	3300004139	Forest Soil	MSALMERRLRISGILIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLIVGITIYLYSLVSVAEPPEA*
Ga0068932_13277402	3300004295	Peatlands Soil	MNASEPRITRYLRISGVLIILGLLVEALSLIRIHPFSFLAFMFIGGALLAAGVVTYLYSLVAVA*
Ga0058899_102342152	3300004631	Forest Soil	MSALMERRLRVSGILIVLGLVVEALSLIRTHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVASSPESASPERIQQK*
Ga0070735_102354162	3300005534	Surface Soil	MSAMRLERRLRISGILIALGLLTEAASLVRIHPLAFLSFMFIGGGFLAAGIVTYLLALVSVPSSPAEK*
Ga0070735_104602192	3300005534	Surface Soil	VTMAARMERRLRVSGILIVLGLLVEALSLIRLHPLAFLGFMFVGGGFLVIGIAIYLYSLVSAASPPAG*
Ga0070730_106545602	3300005537	Surface Soil	MAALMERRLRVSGVLIVLGLLVEALSLIRIHPLAFLAFMFVGGGLLVIGIAIYLYSLVSVTSPSESE*
Ga0070731_100654703	3300005538	Surface Soil	MAALMERRLRISGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGLLMAGIAIYLYSLVSVASTRER*
Ga0070731_103489892	3300005538	Surface Soil	MNAAEQRMTRYLRISGVLIILGLLVEALSLIRIHPLSFLAFMFIGGGLLAAGIVTYLYSLVAVAGPPRSEDHS*
Ga0070731_103807172	3300005538	Surface Soil	GAPQPNEILGIAKMSAPRIERRLRISGILIALGLLTEAASLIRIHPLAFLSFMFIGGGFLAAGILTYLLALVALPSSPAEK*
Ga0070733_101336234	3300005541	Surface Soil	VTMAALMERRLRISGVLIVLGLLVEALSLIRIHPLAFLAFMFVGGGLLVAGIAIYLYSLVSVTSPSESE*
Ga0070733_102441294	3300005541	Surface Soil	GIKVLGAQMNIAARMDRRLRVSGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGFLVAGIAIYLYSLVSVSSLPES*
Ga0070732_102874891	3300005542	Surface Soil	MLTKKERRLRLSGMLIMLGLLVEALSLIRIHPLTFLAFMCIGGGSIVVGIAIYLISVVSPSAD*
Ga0070732_103699752	3300005542	Surface Soil	MTQTERRLRISGILIALGLLVEALSLMRVHPLAFLGFMFIGGGLLVVGIVIYLYSLVSVPSPPEVR*
Ga0070732_107206232	3300005542	Surface Soil	MAALMERRLRVSGVLIVLGLLVEALSLIRIHPLAFLAFMFVGGGLLVAGIAIYLYSLVSVTSPSESE*
Ga0066704_100030353	3300005557	Soil	LGAEVTMATQTERRLRISGILIVLGLLVEALSLARIHPLAFLGFMFVGGGLLVFGIAIYLYSIVSAASPPEIR*
Ga0066691_101440502	3300005586	Soil	VTAPSQMDWRLRVSGILIALGLLAEALSLIRIHPLAFLGFMFVGGGFLIIGVAIYLYSLISVSSPPSS*
Ga0070761_103460902	3300005591	Soil	MNAPEQHMTRYMRISGVLIILGLLVEALSLIRIHPLSFLAFMFIGGGFIAAGVLTFLYSLVA*
Ga0070766_100149325	3300005921	Soil	VIMSALMERRLRTSGTLIVLGLLVEALSLVRVHPLVFLGFMFVGGGFLIVGITIYLYSLVSVAEPPKA*
Ga0075029_1010836931	3300006052	Watersheds	HMTRRLRVSGVLIILGLVVEALSLIRIHPLSFLAFMFIGGGFIVAGVLAFLYSLVA*
Ga0070765_1001205814	3300006176	Soil	MSALMERRLRTSGTLIVLGLLVEALSLVRVHPLVFLGFMFVGGGFLIVGITIYLYSLVSVAEPPKA*
Ga0079222_100017932	3300006755	Agricultural Soil	MTMGKTMDDRLRVSGILIVLGLVVEALSLVRIHPLGFLAFMFVGGGLLVLGVGIYLYSLVSLPSPPKE*
Ga0079222_100149561	3300006755	Agricultural Soil	VTTPQIDRRLRISGILIVLGLLVEALSLIRIDALAFLVSMFVGGGFLIVGIAIYLYSLVSVSSPPPAK*
Ga0066658_104777542	3300006794	Soil	MTMTNRMEGRLRFSGILIALGLLIEAFSLARVHRLAFLTFMFIGGALLIAGMAIYLYSLASVSTPPDY*
Ga0066659_101652812	3300006797	Soil	VTMATEMDRRLRVSGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGFLILGIALYLYSLVSVASPPDLK*
Ga0079221_1000095612	3300006804	Agricultural Soil	MTMGKTMDDRLRVSGILIVLGLVVEALSLVRIHPLGFLAFMFVGGGLLVLGMGIYLYSLVSLPSPPKE*
Ga0079220_106582141	3300006806	Agricultural Soil	VTTPQIDRRLRISGILIVLGLLVEALSLIRIHPLAFLVFMFVGGGFLIVGIAIYLYSLVSVSSPPPAK*
Ga0126381_1002077064	3300010376	Tropical Forest Soil	MERRLRVSGILITLGLLVEALSFIRVHPLAFLGFMFIGGGLLAIGIAVYLYSLVSVPSPPEVT*
Ga0138564_11361123	3300011086	Peatlands Soil	MNASEPRITRYLRISGVLIILGLLVEALSLIRIHPFSFLAFMFIGGALLAAGVGPISIRWWP*
Ga0150983_102342072	3300011120	Forest Soil	MAALMERRLRISGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVASTRER*
Ga0150983_111301891	3300011120	Forest Soil	MTAVAKMDRRLRISGILIVLGLLVEALSLIRIHPLAFLGFMFLGGGLLVAGIAIYLYSLVSLTSPPESARPERIV
Ga0150983_137806523	3300011120	Forest Soil	MERRLRISGILIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLIVGITIYLYSLVSVAEPPEA*
Ga0150983_155795402	3300011120	Forest Soil	MSALMERRLRVAGILIVLGLLVEALSLIRTHPLAFLGFMFVGGGLLIAGIAIYLYSLVSVASTPES*
Ga0182015_109897521	3300014495	Palsa	MNVLEPRMTRYLRISGVLIILGLLVEALSLIRIHPLSFLAFMFIGGGLLAAGVVTFLYSLVAVAGHPFPEDPS*
Ga0182024_102027123	3300014501	Permafrost	MNASEQHMARYLRISGVLIILGLLVEALSLIRIHPLSFLGFMFIGGGFIAAGVVTFLYSLVAVAGPSSPDDPS*
Ga0187824_100012165	3300017927	Freshwater Sediment	MAALMERRLRISGVLIVLGLLVEALSLIRIHPLAFLAFMFVGGGLLVAGIAIYLYSLVSVTSPSESE
Ga0187824_100085832	3300017927	Freshwater Sediment	MTGTSGIEGRLRISGVLIVLGLLVEALSLIRIHPLAFLSFMFIGGALLIAGIIVYLTSIAAASSPSGD
Ga0187781_101528482	3300017972	Tropical Peatland	MANRLQGRLRLSGILIVLGLLVEGLSLVRIHPLAFLVFMFVGGGFLIVGIAVYLYSLVAVDSPPES
Ga0187822_100215371	3300017994	Freshwater Sediment	VTMAALMERRLRISGVLIVLGLLVEALSLIRIHPLAFLAFMFVGGGLLVAGIAIYLYSLVSVT
Ga0210407_106302091	3300020579	Soil	MSALMERRLRISGILIVLGLVVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSRLES
Ga0210403_100518904	3300020580	Soil	VTMSALMERRLRISGTLIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLIVGITIYLYSLVSVAEPPKA
Ga0210399_100184453	3300020581	Soil	MSALMERRLRISGTLIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLIVGITIYLYSLVSVAEPPKA
Ga0210399_100693715	3300020581	Soil	MSALMERRLRISGMLIVLGLVVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSPPES
Ga0210401_102246323	3300020583	Soil	MSALMERRLRISGILIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLIVGITIYLYSLVSVAEPPEA
Ga0210401_102463362	3300020583	Soil	MSALMERRLRISGMLIVLGLLVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSRPES
Ga0210401_115857111	3300020583	Soil	LGAAEVTGNEPILERRLRRSGILIAVGLLVEALSLVRIHPLAFLGFVFIGGGLLVSGVATFLYSLVSVAPADER
Ga0215015_104340324	3300021046	Soil	VTMATQTERRLRISGILIALGLLVEALSLVRIHPLAFLGFMFVGGGLLVFGIAIYLYSIVSAASPPEIR
Ga0215015_107995111	3300021046	Soil	MAALMERRLRISGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGFLVAGIAIYLYSLVSVTSRQRVE
Ga0210406_100536064	3300021168	Soil	MSALMERRLRISGMLIALGLVVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSPPES
Ga0210400_104143201	3300021170	Soil	MSALMERRLRISGILIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLILGITIYL
Ga0210405_100777094	3300021171	Soil	VTMAALVERRLRISGMLIVLGLVVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLV
Ga0210405_105064462	3300021171	Soil	MAALMERRLRISGMLIVLGLLVEALSLIRIHPLAFLGFMFVGGGFLIAGIAMYLYSLVSITAPPEVK
Ga0210405_107098462	3300021171	Soil	VIMSALMERRLRISGILIVLGLLVEALSLIRIHPLAFLAFMFIGGALLIAGIGIYLYSIASASSPSGD
Ga0210408_101373024	3300021178	Soil	MAALMERRLRISGMLIVLGLLVEALSLIRIHPLAFLGFMFVGGGLLVAGIGIYLYSLVSIAAPPEVK
Ga0210408_105158221	3300021178	Soil	SGILIVLGLVVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSRPES
Ga0210396_105228041	3300021180	Soil	MSALMERRLRVSGILIVLGLVVEALSLIRTHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVASSPESASPERIQQK
Ga0210394_1000174322	3300021420	Soil	MNAPEQSMARRLRISGVLIILGLLVEALSLVRIHPLAFLGFMFIGGGLLAAGMIVYLFALVSVVPPS
Ga0210394_100165883	3300021420	Soil	VIMSALMERRLRTSGTLIVLGLLVEALSLVRVHPLVFLGFMFVGGGFLIVGITIYLYSLVSVAEPPKA
Ga0210394_100296414	3300021420	Soil	MNVQTKRQRRLRISGILIMLGLVVEALSLIRIHPIAFLAFMFVGGTCLLVGIGIYLLSIVSPSED
Ga0210394_100383125	3300021420	Soil	VTMSALMERRLRVAGILIVLGLLVEALSLIRTHPLAFLGFMFVGGGLLVAGMAIYLYSLVSVASTRER
Ga0210394_102887992	3300021420	Soil	VNASEERMTRYLRISGVLIILGLVVEALSLIRIHPLSFLGFMFIGGGLLAAGVVIYLYSLVAVARLPPSEDHS
Ga0210394_111511232	3300021420	Soil	GTTGIERRLRISGILIALGLLVEGFSLIRVHPLAFLAFMLIGGALLIAGIGIYLYFIASASSPPG
Ga0210394_111841862	3300021420	Soil	MSAPRLERRLRISGVLIALGLLTEAASLIRIHPLAFLSFMFIGGGFLAAGILTYLLALIALPASPAEK
Ga0210384_100996343	3300021432	Soil	VTMAALMERRLRISGMLIVLGLLVEALSLIRIHPLAFLGFMFVGGGFLIAGIAMYLYSLVSITAPPEVK
Ga0210384_101173682	3300021432	Soil	MSALMERRLRISGTLIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLILGITIYLYSLVSVAEPPKA
Ga0210392_109518842	3300021475	Soil	MSALMERRLRISGMLIVLGLVVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSRPES
Ga0187846_100047347	3300021476	Biofilm	MTQMERRLRISAILIALGLLVEALSLIRVHPLAFLGFMFIGGGLLVLGIVIYLYSLVSVPSPPEVS
Ga0187846_102285492	3300021476	Biofilm	MLTKRERRLRLSGMLIMLGLLVEALSLIRIHPLTFLVFMFIGGGSIVVGIAIYLISVVSPSA
Ga0210398_110950692	3300021477	Soil	TLMEQRLRISGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGLLIAGIAIYLYSLVSVASTPES
Ga0210402_107385721	3300021478	Soil	ALMERRLRISGMLIALGLVVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSPPES
Ga0210410_100578144	3300021479	Soil	VTMSALMERRLRISGTLIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLMVGITIYLYSLVSVAEPPKA
Ga0210409_100137068	3300021559	Soil	MAALVERRLRISGMLIVLGLVVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSPPESE
Ga0210409_103517801	3300021559	Soil	ILECRLRTSGILIAVGLLVEALSLVRIHPLAFLGFVFIGGGLLVSGVATFLYSLVSVAPADER
Ga0210409_103971382	3300021559	Soil	VTMATLMERRLRISGILIVLGLLVEAFSLIRIHPLAFLGFMFVGGGFLIAGIAMYLYSLVSITAPPEVK
Ga0210409_115611151	3300021559	Soil	HCASFRIEVLGAKVIMSALMERRLRISGTLIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLIVGITIYLYSLVSVAEPPKA
Ga0242655_100941702	3300022532	Soil	MSALMERRLRVSGILIVLGLVVEALSLIRTHPLAFLGFMFVGGGLLVAGIAIYLYSLVSV
Ga0209521_106676752	3300025164	Soil	LTIAGLLVEFFSLLRIHPLAFLTFMFVGGAFLVAGIALYLYSIIATPAPHDNHPS
Ga0209806_13046042	3300026529	Soil	LGAEVTMATQTERRLRISGILIVLGLLVEALSLARIHPLAFLGFMFVGGGLLVFGIAIYLYSIVSAASPPEIR
Ga0209004_10013734	3300027376	Forest Soil	MAALMERRLRISGILIVLGLLVEALSLIRIHPLAFLAFMFIGGGFLIAGMGIYLYAIASASSPPG
Ga0209219_10238754	3300027565	Forest Soil	VTMAALMERRLRISGMLIVLGLVVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSPSES
Ga0209178_10106022	3300027725	Agricultural Soil	MTMGKTMDDRLRVSGILIVLGLVVEALSLVRIHPLGFLAFMFVGGGLLVLGMGIYLYSLVSLPSPPKE
Ga0209073_100747312	3300027765	Agricultural Soil	MTMGKTMDDRLRVSGILIVLGLVVEALSLVRIHPLGFLAFMFVGGGLLVLGVGIYLYSLVSLPSPPKE
Ga0209274_104714821	3300027853	Soil	MNAPEQHMTRYMRISGVLIILGLLVEALSLIRIHPLSFLAFMFIGGGFIAAGVLTFLYSLVA
Ga0209167_100874283	3300027867	Surface Soil	MNIAARMDRRLRVSGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGFLVAGIAIYLYSLVSVSSLPES
Ga0209579_101461782	3300027869	Surface Soil	MAALMERRLRISGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGLLMAGIAIYLYSLVSVASTRER
Ga0209579_103189422	3300027869	Surface Soil	MNAAEQRMTRYLRISGVLIILGLLVEALSLIRIHPLSFLAFMFIGGGLLAAGIVTYLYSLVAVAGPPRSEDHS
Ga0209579_103718771	3300027869	Surface Soil	RLRISGILIALGLLTEAASLIRIHPLAFLSFMFIGGGFLAAGILTYLLALVALPSSPAEK
Ga0170834_1037369832	3300031057	Forest Soil	MSALMERRLRISGMLIVLGLLVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVTSPPES
Ga0170824_1224617131	3300031231	Forest Soil	VTGNGPILERRLRASGILIVLGLLVEALSLVRIHPLAFLGFVFIGGGLLVSGMATFLYSLVSVAPTDER
Ga0302325_100709132	3300031234	Palsa	MSAPEQRMTRYLRISGVLIILGLLVEALSLIRIHPLSFLAFMFIGGGLLAAGVVTFLYSLVAIADHPSPEEHT
Ga0302324_1005090672	3300031236	Palsa	MNAPEQRMTRYLRISGVLIILGLLVEALSLIRIHPLSFLAFMFIGGGLLAAGVVTFLYSLVAIADHPSPEEHT
Ga0170818_1063386721	3300031474	Forest Soil	LGAAEVTGNGPILERRLRASGILIVLGLLVEALSLVRIHPLAFLGFVFIGGGLLVSGMATFLYSLVSVAPTDER
Ga0310686_1022263581	3300031708	Soil	GAEVTMAASMERRLQISGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGLLVAGIAMYLYSLVSVASTPES
Ga0307476_104587361	3300031715	Hardwood Forest Soil	MNASEQRMARYLRISGVLIILGLLVEALSLIRIHPLSFLAFMFIGGGFIAAGVVTFLYSLVAVVSHPSPEDPS
Ga0307469_109156523	3300031720	Hardwood Forest Soil	AVMERRLRISGMLIVLGLLVEALSLIRIHPLAFLGFMFVGGGFLIAGIAMYLYSLVSIAAPPEVK
Ga0307477_1000158519	3300031753	Hardwood Forest Soil	MTGTTGIERRLRISGILIALGLLVEGFSLIRVHPLAFLAFMLIGGALLIAGIGIYLYFIASASSPPG
Ga0307477_101448654	3300031753	Hardwood Forest Soil	MAALMERRLRISGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVASTRER
Ga0307477_109686111	3300031753	Hardwood Forest Soil	MAIGIERRLRISGVLIVLGLLVEAFSLIRVHPLAFLGFMFVGGGLLLGGIAVYLYSILSA
Ga0307475_101199873	3300031754	Hardwood Forest Soil	VTTAALMERRLRISGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGFLIVGITIYLYSLVSVAEPPKA
Ga0307478_107784662	3300031823	Hardwood Forest Soil	VTMAALMERWLRISGTLIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLILGITIYLYSLVSVAEPPKA
Ga0307478_108128181	3300031823	Hardwood Forest Soil	MNASEQRMARYLRISGVLIILGLLVEALSLIRIHPLSFLAFMFIGGGFIAAGVVTFLYSLVAVVSHPSPEDHS
Ga0307478_117352041	3300031823	Hardwood Forest Soil	TMSALMERRLGVSGILIVLGLVVEALSLIRTHPLAFLGFMFVGGGLLVAGIAIYLYSLVSVASSPESASPERIQQK
Ga0307479_100473844	3300031962	Hardwood Forest Soil	VTTTALMERRLRISGILIVLGLLVEALSLVRIHPLAFLGFMFVGGGFLIVGITIYLYSLVSVAEPPKA
Ga0307471_1001290345	3300032180	Hardwood Forest Soil	IKVLGAEIAMTQTERRLRISGILIALGLLVEALSLMRVHPLAFLGFMFIGGGLLVIGIVIYLYSLVSVPSPPEVK
Ga0307471_1001564773	3300032180	Hardwood Forest Soil	MATEMDRRLRVSGILIVLGLLVEALSLIRIHPLAFLGFMFVGGGFLILGVALYLYSLVSVASPPDLK
Ga0307471_1006173882	3300032180	Hardwood Forest Soil	MTGATGIERRLRISGTLIALGLLVEGLSLIRIHPLAFLGFMFIGGALLLAGIAVYLLSIAAASSPSND
Ga0307471_1016273182	3300032180	Hardwood Forest Soil	VIMAALMERRLRISGILIVLGLLVEALSLIRIHPLAFLAFMFIGGALLIAGIGIPLLLRLHHRVTMS
Ga0335079_116065652	3300032783	Soil	MANRLEGRLRVSGILIVIGLLVEALSLVRIHPLAFLGFMFIGGGFLVVGVAIYLYSLVTVGSPPEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089210

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences