NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F089124

Metagenome Family F089124

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F089124
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 143 residues
Representative Sequence MEDDREPYEPLWAESLRREASPKPEAAAKPKPPSFRARPALAIVALVVFAVFLGVIVSDDSSRVTFADLPSYWGSVEMTCATVRVEEDDRALELFRCKAQGAGQLPPGDYRPPETNWRSDFDRRPATDHAIRISPNGVVLGWARYVP
Number of Associated Samples 90
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 68.81 %
% of genes near scaffold ends (potentially truncated) 44.95 %
% of genes from short scaffolds (< 2000 bps) 94.50 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (81.651 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.431 % of family members)
Environment Ontology (ENVO) Unclassified
(41.284 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(69.725 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 13.71%    β-sheet: 30.29%    Coil/Unstructured: 56.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF13466STAS_2 2.75
PF06628Catalase-rel 1.83
PF02899Phage_int_SAM_1 1.83
PF08241Methyltransf_11 0.92
PF01904DUF72 0.92
PF01022HTH_5 0.92
PF06742DUF1214 0.92
PF13380CoA_binding_2 0.92
PF13683rve_3 0.92
PF08282Hydrolase_3 0.92
PF02219MTHFR 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0753CatalaseInorganic ion transport and metabolism [P] 1.83
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 1.83
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 1.83
COG0560Phosphoserine phosphataseAmino acid transport and metabolism [E] 0.92
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 0.92
COG06855,10-methylenetetrahydrofolate reductaseAmino acid transport and metabolism [E] 0.92
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 0.92
COG1877Trehalose-6-phosphate phosphataseCarbohydrate transport and metabolism [G] 0.92
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 0.92
COG3769Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamilyCarbohydrate transport and metabolism [G] 0.92
COG5361Uncharacterized conserved proteinMobilome: prophages, transposons [X] 0.92
COG5402Uncharacterized protein, contains DUF1214 domainFunction unknown [S] 0.92


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A81.65 %
All OrganismsrootAll Organisms18.35 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459021|G14TP7Y01B3LSLNot Available556Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c2260424Not Available828Open in IMG/M
3300000956|JGI10216J12902_109755679All Organisms → cellular organisms → Bacteria1135Open in IMG/M
3300001686|C688J18823_10134504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1704Open in IMG/M
3300003987|Ga0055471_10073416Not Available967Open in IMG/M
3300004081|Ga0063454_101826279Not Available533Open in IMG/M
3300004114|Ga0062593_101708524Not Available688Open in IMG/M
3300004643|Ga0062591_101100305Not Available765Open in IMG/M
3300005334|Ga0068869_101344489Not Available631Open in IMG/M
3300005338|Ga0068868_101275556Not Available682Open in IMG/M
3300005345|Ga0070692_11106239Not Available560Open in IMG/M
3300005353|Ga0070669_101552785Not Available576Open in IMG/M
3300005438|Ga0070701_10601564Not Available728Open in IMG/M
3300005441|Ga0070700_100807212Not Available756Open in IMG/M
3300005441|Ga0070700_101746717Not Available535Open in IMG/M
3300005455|Ga0070663_101067849Not Available705Open in IMG/M
3300005456|Ga0070678_101055932Not Available749Open in IMG/M
3300005459|Ga0068867_100099313Not Available2220Open in IMG/M
3300005535|Ga0070684_102320051Not Available506Open in IMG/M
3300005564|Ga0070664_101940647Not Available559Open in IMG/M
3300005618|Ga0068864_101060853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli805Open in IMG/M
3300005718|Ga0068866_11364775Not Available517Open in IMG/M
3300005719|Ga0068861_101383454Not Available687Open in IMG/M
3300005719|Ga0068861_101413230Not Available680Open in IMG/M
3300006058|Ga0075432_10371664Not Available611Open in IMG/M
3300006196|Ga0075422_10467555Not Available568Open in IMG/M
3300006624|Ga0101567_10670999Not Available543Open in IMG/M
3300006844|Ga0075428_100976410Not Available897Open in IMG/M
3300006844|Ga0075428_101009550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria881Open in IMG/M
3300006845|Ga0075421_102119050Not Available596Open in IMG/M
3300006853|Ga0075420_100427422Not Available1145Open in IMG/M
3300006876|Ga0079217_10102634All Organisms → cellular organisms → Bacteria1289Open in IMG/M
3300006918|Ga0079216_10833204Not Available683Open in IMG/M
3300006918|Ga0079216_11158883Not Available616Open in IMG/M
3300006969|Ga0075419_10854802Not Available654Open in IMG/M
3300007004|Ga0079218_10213179All Organisms → cellular organisms → Bacteria1486Open in IMG/M
3300009094|Ga0111539_10674159All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300009094|Ga0111539_11188103Not Available886Open in IMG/M
3300009094|Ga0111539_11256265Not Available860Open in IMG/M
3300009098|Ga0105245_10224475All Organisms → cellular organisms → Bacteria1814Open in IMG/M
3300009100|Ga0075418_11569904Not Available715Open in IMG/M
3300009100|Ga0075418_12575541Not Available555Open in IMG/M
3300009147|Ga0114129_11703036Not Available769Open in IMG/M
3300009148|Ga0105243_10973705Not Available849Open in IMG/M
3300009156|Ga0111538_11565253Not Available831Open in IMG/M
3300009156|Ga0111538_13129645Not Available577Open in IMG/M
3300009176|Ga0105242_10282158Not Available1509Open in IMG/M
3300009177|Ga0105248_13038381Not Available534Open in IMG/M
3300009177|Ga0105248_13386223Not Available507Open in IMG/M
3300009553|Ga0105249_11806503Not Available684Open in IMG/M
3300009553|Ga0105249_12040722Not Available646Open in IMG/M
3300009789|Ga0126307_10523865Not Available957Open in IMG/M
3300009840|Ga0126313_10602600Not Available885Open in IMG/M
3300010036|Ga0126305_10663804Not Available704Open in IMG/M
3300010038|Ga0126315_11106661Not Available535Open in IMG/M
3300010038|Ga0126315_11118057Not Available532Open in IMG/M
3300010042|Ga0126314_10038204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3052Open in IMG/M
3300010045|Ga0126311_10752787Not Available782Open in IMG/M
3300010375|Ga0105239_12175345Not Available645Open in IMG/M
3300010399|Ga0134127_11685522Not Available709Open in IMG/M
3300012212|Ga0150985_104159417All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia649Open in IMG/M
3300012943|Ga0164241_10528005Not Available851Open in IMG/M
3300014326|Ga0157380_11969155Not Available646Open in IMG/M
3300014488|Ga0182001_10203447Not Available726Open in IMG/M
3300014745|Ga0157377_10419147Not Available916Open in IMG/M
3300015373|Ga0132257_103653956Not Available560Open in IMG/M
3300015374|Ga0132255_100815798Not Available1391Open in IMG/M
3300017792|Ga0163161_11672372Not Available563Open in IMG/M
3300017792|Ga0163161_11731895Not Available554Open in IMG/M
3300018422|Ga0190265_10492476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1337Open in IMG/M
3300018422|Ga0190265_12023541Not Available681Open in IMG/M
3300018429|Ga0190272_11893734Not Available627Open in IMG/M
3300018432|Ga0190275_10128978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2295Open in IMG/M
3300018432|Ga0190275_10285367All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1611Open in IMG/M
3300018432|Ga0190275_10882100Not Available962Open in IMG/M
3300018465|Ga0190269_11342004Not Available575Open in IMG/M
3300018466|Ga0190268_10720920Not Available737Open in IMG/M
3300018469|Ga0190270_10129458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2005Open in IMG/M
3300018469|Ga0190270_11335308Not Available761Open in IMG/M
3300018476|Ga0190274_11203362Not Available841Open in IMG/M
3300018481|Ga0190271_10009139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia6888Open in IMG/M
3300018920|Ga0190273_11988009Not Available538Open in IMG/M
3300019377|Ga0190264_10402560Not Available888Open in IMG/M
3300020181|Ga0196958_10028560All Organisms → cellular organisms → Bacteria → Terrabacteria group1636Open in IMG/M
3300021184|Ga0196959_10170847Not Available543Open in IMG/M
3300025899|Ga0207642_10202136Not Available1098Open in IMG/M
3300025909|Ga0207705_10222595Not Available1434Open in IMG/M
3300025927|Ga0207687_10315930Not Available1263Open in IMG/M
3300025932|Ga0207690_11805670Not Available510Open in IMG/M
3300025935|Ga0207709_11069372Not Available662Open in IMG/M
3300025945|Ga0207679_10540834Not Available1044Open in IMG/M
3300025945|Ga0207679_11815736Not Available557Open in IMG/M
3300025961|Ga0207712_11374681Not Available632Open in IMG/M
3300025981|Ga0207640_10904193Not Available771Open in IMG/M
3300026067|Ga0207678_11886993Not Available521Open in IMG/M
3300026095|Ga0207676_11040005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli808Open in IMG/M
3300026118|Ga0207675_102188163Not Available568Open in IMG/M
3300026118|Ga0207675_102610723Not Available515Open in IMG/M
3300026121|Ga0207683_10503373Not Available1119Open in IMG/M
3300027907|Ga0207428_10649679Not Available757Open in IMG/M
3300027909|Ga0209382_11878030Not Available580Open in IMG/M
3300028587|Ga0247828_11020505Not Available542Open in IMG/M
3300028802|Ga0307503_10765969Not Available548Open in IMG/M
3300030006|Ga0299907_10197212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1662Open in IMG/M
3300031184|Ga0307499_10261343Not Available557Open in IMG/M
3300031229|Ga0299913_10176566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2111Open in IMG/M
3300031229|Ga0299913_11110265Not Available753Open in IMG/M
3300031901|Ga0307406_10747095All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300032002|Ga0307416_102148501Not Available660Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.43%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere15.60%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil6.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere6.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.50%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere4.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.59%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.83%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.92%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.92%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.92%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.92%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459021Litter degradation NP4EngineeredOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006624Soil microbial communities from the Leymus chinensis steppe, China - after adding 1.75 g N m- 2, yr-1EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020181Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10EnvironmentalOpen in IMG/M
3300021184Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4NP_035374602170459021Switchgrass, Maize And Mischanthus LitterYKPLWAESLRRGASPKPEAAANPKPPSFRARPALAIVALIMLGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
ICChiseqgaiiDRAFT_226042423300000033SoilMEDDRERYEPLWAERLRREASPKPEAAAKPKPPSFRARPALAIVALVVFAGLLGVIVNDDLSRVTFADLPSYWESVEMTCATVRFEEDDRTIEMFRCKAQGAGQLPPGSYRPPETNWNSDFDRRPATDHAIRISPNGVVVGWALYVP*
JGI10216J12902_10975567923300000956SoilMEDDREPYEPLWAESLRREGSPRPEATAKPKSPSFPSRPALAIVALVVVAVLVGAIVSDDSDRVRFAHLPSYWESVKMTCATLRVEEDDRTIEMFRCKAQGAGQLPPGSYRSPEINWNSDFDRRPARDLAIRISPNGVVVGWALYVP*
C688J18823_1013450433300001686SoilMEDDREPYEPLWAESLRREASPKPEAAAKPKPPSFRSRPVLAIVAVVVCAVLVGAIVSDDSDRVTFAHLPSYWESVEMTCATLRIEEDDRTIEIFRCKAQGAGQLPPGSYRPPETNWNSDFDRRPATDHAIRISANGVVVGWALYVP*
Ga0055471_1007341623300003987Natural And Restored WetlandsMEDDREPYKPLWAESLRREGSPKSEAAAKPKPPSVRASPALAIVALVMFGVLLGVIVSDDPSRVTFAELPSYWGNVEMTCATVRVGEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRPATDHAIRISPNGVVLGWARYVP*
Ga0063454_10182627913300004081SoilEPLWAESLRREASPKPEAAAKPKPPSFRSRPVLAIVAVVVCAVLVGAIVSDDSDRVTFAHLPSYWESVEMTCATLRIEEDDRTIEIFRCKAQGAGQLPPGSYRPPETNWNSDFDRRPATDHAIRISANGVVVGWALYVP*
Ga0062593_10170852413300004114SoilMEDDREPYEPLWAESLRRTGSSKPEAAAKPKPPSFPPRPALAIVALVVFAVLVGAIVSDDSGRVTFARLPSYWESVEMTCATVRFEEDDRTIEMFRCKAQGAGQLPPGSYRPPETNWNSDFDRRPATDHAIRISPNGVVVGWALYVP*
Ga0062591_10110030513300004643SoilMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0068869_10134448913300005334Miscanthus RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAANPKPPSFRARPALAIVALIMFGILLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0068868_10127555613300005338Miscanthus RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRASPALAIVALVMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYIP*
Ga0070692_1110623913300005345Corn, Switchgrass And Miscanthus RhizosphereMEDDREPYEPLWAESLRREASPKPETAAKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEGDGRAIEYFYCKAQGAGRLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0070669_10155278513300005353Switchgrass RhizosphereMEDDREPYEPLWAASLRREASPKPEAAPKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHVIRISSNGVVLGWARYVP*
Ga0070701_1060156423300005438Corn, Switchgrass And Miscanthus RhizospherePEAAARPKKLPSFRAGLALAIVALVAFAALGATDSDDSGGVTFANLPSYWGSVEMRCATVRIERNDRTLEIFRCKAQGAGQLPPGAYRPPETNWNSDFDRRPATDHAIRISPNGVVLGWALYVP*
Ga0070700_10080721213300005441Corn, Switchgrass And Miscanthus RhizosphereMDDDREPYEPLWAESLRKEPSPKPEAAARPKKLPSFRAGLALAIVALVAFAALGATDSDDSGGVTFANLPSYWGSVEMRCATVRIERNDRTLEIFRCKAQGAGQLPPGAYRPPETNWNSDFDRRPATDHAIRISPNGVVVGWALYVP*
Ga0070700_10174671713300005441Corn, Switchgrass And Miscanthus RhizosphereYKPLWAESLRREASPKPETAAKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEGDGRAIEYFYCKAQGAGRLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0070663_10106784913300005455Corn RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIVALIMLGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISP
Ga0070678_10105593213300005456Miscanthus RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYRP*
Ga0068867_10009931313300005459Miscanthus RhizosphereKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEGDGRAIEYFYCKAQGAGRLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0070684_10232005113300005535Corn RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAVATLVMFGILLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0070664_10194064713300005564Corn RhizosphereMEDDRERYEPLWAERLRREASPKPEAAAKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0068864_10106085323300005618Switchgrass RhizosphereMEDDREPYDPLWAESLRRAASPKPEAAAKPKLPSFRASPALAIVALVMLGVLLGVIVSDDPSRVTFAELPSYWESVEMTCATVRVEEDGRALEYFLCRARGAGRLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGIVLGWARYVP*
Ga0068866_1136477513300005718Miscanthus RhizosphereEAAAKPKPPSFPRRPALAIVALVVFAVLVGAIVSDDSGRVTFAHLPSYWESVEMTCATVRIEEDDRTIEIFRCKAQGAGRLPPGSYRPPETNWNSDFDRRPATDHAIRISPNGVVVGWALYVP*
Ga0068861_10138345413300005719Switchgrass RhizosphereMEDDREPYKPLWAESLRREASPKPETAAKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEGDGRAIEYFYCKAQGAGRLPPGDYRPPETNWRSDFDRRRATDHVIRISSNGVVLGWARYIP*
Ga0068861_10141323013300005719Switchgrass RhizosphereMDDDREPYEPLWAESLRKEPSPKPEAAARPKKLPSFRAGLALAIVALVAFAALGATDSDDSGGVTFANLPSYWGSVEMRCATVRIERNDRTLEIFRCKAQGAGQLPPGAYRPPETNWNSDFDRRPATDHAIRISP
Ga0075432_1037166413300006058Populus RhizosphereWAESLRREASPKPEAAANPKPPSFQANPALAIVALVVFGVLLSVIVNDDSSRVTFAKLPSYWGSVAMTCATVRVEGDGRAREYFFCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0075422_1046755523300006196Populus RhizosphereMEDDREPYKPLWAESLRREASPKPEAAANPKPPSFQANPALAIVALVVFGVLLSVIVNDDSSRVTFAKLPSYWGSVAMTCATVRVEGDGRAREYFFCKAQGAGQLPPGDYRPPESNWRSDFDRRR
Ga0101567_1067099913300006624SoilPYEPLWAESLRREASPKPEPAAKTKPASFQARTALAIVALVGFGVLLSVIVSDDSSRVTFAKLPSYWGSVEMTCATVRREEDDRTLEVFRCNARGAGQLPPGDYRPPETNWNSDFDRRRATDHAIRISPTGVVRGWALYVP*
Ga0075428_10097641013300006844Populus RhizosphereVSPWRKVAYKAVAFQHRGARDAARLACVGRMVDDREPYEPLWAEGLRRQPGRQPEEPAKPKSPPFPAGLALAIAALVISAVLLGVMVNSPSSRVTFANLPSYWGSVEMTCATWRIEAGDGTLEVFRCRPRGSGELPPGTYRPPGTNWNSDFDRRPAADHAIRISASGEVVGWAHYRR*
Ga0075428_10100955023300006844Populus RhizosphereAESLRREASPKPEAAANPKPPSFQANPALAIVALVVFGVLLSVIVNDDSSRVTFAKLPSYWGSVAMTCATVRVEGDGRAREYFFCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0075421_10211905013300006845Populus RhizosphereVADSTKRSSPAGLSRYLTATARRVRSRGAAGLACGGRMEDDREPYKPLWAESLRREASPKPEGAAKPKPPSLRARPALAIVALIVFGVLLGLIVSDDSSRVTFAELPSYWGSVEMTCATVRVEEDGRALEFFLCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0075420_10042742213300006853Populus RhizosphereHTRRSRFQHRGARDAARLACVGRMADDREPYEPLWAEGLRRQPGRQLEEPAKPKSPPFPAGLALAIAALVISAVLLGVMVNSPSSRVTFANLPSYWGSVEMTCATWRIEAGDGTLEVFRCRPRGSGELPPGTYRPPGTNWNSDFDRRPAADHAIRISASGEVVGWAHYRR*
Ga0079217_1010263413300006876Agricultural SoilMEDDREPYKPLWAESLRREASPKPEPAAKPKPPSFQARPALAIVALVVFGVLLSVIVNDASSRVTFAKLPSYWGSVAMTCATVRVEGDGRAREYFFCKAQGAGQLPPGDYRPPETKWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0079216_1083320413300006918Agricultural SoilASPKPEAAAKPKPPSFPARPALAIVALVVFTVLLGVIVSDDSRGVTFADLPSYWGSVEMTCATVRIEEDDRTLEFFRCNAQGAGQLPPGDYRPPATNWNSDFDRRRATDHVIRISPTGKVVGWALYVP*
Ga0079216_1115888313300006918Agricultural SoilEASPKPEPAAKPKPPSFQARPALAIVALVAFGVLLSVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEEDGRALEFFFCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0075419_1085480213300006969Populus RhizosphereKPEPAAKPKPPSFRSRPVLAIVALVVVGVLLSVIVNDDSSRVTFAKLPSYWGSVAMTCATVRVEGDGRAREYFFCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0079218_1021317913300007004Agricultural SoilMEDDREPYKPLWAESLRREASPKPDPAAKPKPPSFQARPALAIVALVVFGVLLSVIVNDDSSRVTFARLPSYWGSVEMTCATVRVEEEDGRTREFFFCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0111539_1067415923300009094Populus RhizosphereMEDDREPYKPLWAASLRREASPKPEAAPKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEEDGRAIEYFLCRAQGAGELPPGEYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0111539_1118810313300009094Populus RhizosphereMEDDREPYEPLWAESLRREASPKPEAAAKPKSPSFPPRPALAIVALVVFALLVGAIVSDDSGRVTFAHLPSYWESVEMTCATVRIEEDDRTIEIFRCKAQGAGRLPPGSYRPPETNWNSDFDRRPATDHAIRISPNGVVVGWALYVP*
Ga0111539_1125626523300009094Populus RhizosphereMEDDREPYKPLWAESLRREASPKPEAAANPKPPSFQANPALAIVALVVFGVLLSVIVNDDSSRVTFANLPSYWGSVAMTCATVRVEGDGRAREYFFCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0105245_1022447543300009098Miscanthus RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIVALIMFGILLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0075418_1156990413300009100Populus RhizosphereMADDREPYEPLWAEGLRRQPGRQPEEPAKPKSPPFPAGPALAIAALVMSAVLLGVIVNAHSGRVTFANLPSYWGSVEMTCATWRIEAGDGTLEVFRCRPRGSGELPPGTYRPPGTNWNSDFDRRPAADHAIRISASGEVIGWAHYRR*
Ga0075418_1257554113300009100Populus RhizosphereMEDDREPYKPLWAASLRREASPKPEAAPKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVAMTCATVRVEGDGRAREYFFCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0114129_1170303623300009147Populus RhizosphereMEDDREPYKPLWAESLRREASPKPEAAANPKPPSFQANPALAIVALVVFGVLLSVIVNDDSSRVTFAKLPSYWGSVAMTCATVRVEGDGRAREYFFCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0105243_1097370513300009148Miscanthus RhizosphereMEDDREPYKPLWAESLRREASPKPEAATKPKPPSFRARPSLAIAALVVFAVFLGVIVNDDSSRVTFAKLPSYWGSVEMTCATVRVDKDGRAVEYFYCKAQGAGRLPPGDYRPPETNWRSDFDRRRATDHVIRISSNGVVLGWARYVP*
Ga0111538_1156525313300009156Populus RhizosphereMEDDREPYKPLWAESLRREASPKPEAAANPKPPSFQANPALAIVALVVFGVLLSVIVNDDSSRVTFANLPSYWGSVEMRCATVRIEEDDRTLEIFRCKAQGAGQLPPGAYRPPETNWSSDFDRRR
Ga0111538_1312964523300009156Populus RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIVALIMFGILLGVIVSDDPSRVTFAELPSYWGSVEMTCATVRVEEDGRALEYFLCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHA
Ga0105242_1028215813300009176Miscanthus RhizosphereMEDDREPYEPLWAESLRREASPKPEAAAKPKPPSFPRRPALAIVALVVFAVLVGAIVSDDSGRVTFARLPSYWESVEMTCATVRIEEDDRTIEIFRCKAQGAGRLPPGSYRPPETNWNSD
Ga0105248_1303838113300009177Switchgrass RhizosphereMEDDREPYDPLWAESLRRAASPKPEAAAKPKLPSFRASPALAIVALVMSGVLLGVIVSDDPSRVTFAELPSYWESVEMTCATVRVEEDGRALEYFLCRARGAGRLPPGDYRPPETSWRSDFDRRRATDHAIRISPKGIVL
Ga0105248_1338622313300009177Switchgrass RhizosphereRRGASPKPEAAAKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATVRVEEDGRALEYFLCRAQGAGRLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0105249_1180650313300009553Switchgrass RhizosphereMDDDREPYEPLWAESLRKEPSPKPEAAARPKKLPSFRAGLALAIVALVAFAALGATDSDDSGGVTFANLPSYWGSVEMRCATVRIERNDRTLEIFRCKAQGAGQLPPGAYRPPETNWNSDFDRRPATDHAIRISPNGVVLGWALYVP*
Ga0105249_1204072213300009553Switchgrass RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPTLAIAALVVLVVLLGVIVDDDSSRVTFAKLPSYWGSVEMTCATVRVEGDGRAIEYFYCKAQGAGRLPPGDYRPPETNWRSDFDRRRATDHVIRISSNGVVLGWARYIP*
Ga0126307_1052386523300009789Serpentine SoilMADDREPYEPLWAEGLRGKPAPKREAPAKPKTPSFPAGPALAIVALVAFGVLFGVSVSARSSSRVTIADLESYWGNVEMTCATVRIQEDDRTVEIFRCHEQGAGQLPPGAYRPPESNWNSDFDRRPAADHAIKISPTGEVLGWALYVP*
Ga0126313_1060260013300009840Serpentine SoilMADDREPYEPLWAEGLRGKPAPKREAPAKPKTPSFPAGPALAMVALVAFGVLFGVIGSDRSSSRVTIADLGSYWGNVEMTCATVRIEEDDGTLELFRCHEQGAGQLPPGAYRPPESNWNSDFDR
Ga0126305_1066380413300010036Serpentine SoilMEDDREPYKPLWAESLRREASPKPEPAAKPKRPSFPAGPALALGAVVAVAVLLGVILSDHSGRVTFADLRSYWGSVEMTCATVRIEEDDRTLEYFRCKAQGAGQLPPGAYRPPETNWNSDFDRRRATDHAIRISPTGVVLGWALYVP*
Ga0126315_1110666113300010038Serpentine SoilRPKPPSFPAKPALAIVALVVSAVLVGAIVSDDSSRITFARLPSYWESVEMTCATVRIEEDDRTIEIFRCKAQGAGQLPPGAYRPPETNWNSDFDRRPATDHAIRISPTGVVVGWALYRP*
Ga0126315_1111805713300010038Serpentine SoilMEDDREPYEPLWAESLRREASPKPEAAAKPKPPSFRARPALAIVALVVFAVFLGVIVSDDSSRVTFADLPSYWGSVEMTCATVRVEEDDRALELFRCKAQGAGQLPPGDYRPPETNWRSDFDRRPATDHAIRISPNGVVLGWARYVP
Ga0126314_1003820423300010042Serpentine SoilMADDREPYEPLWAEGLRGKPAPKREAPAKPKTPSFPAGPALAMVALVAFGVLFGVSVSARSSSRVTIADLESYWGNVEMTCATVRIQEDDRTVEIFRCHEQGAGQLPPGAYRPPESNWNSDFDRRPAADHAIKISPTGEVLGWALYVP*
Ga0126311_1075278713300010045Serpentine SoilMEDDREPYKPLWAESLRREASPKPEAAAKPKPPSLRARPAHAIVALSVFGVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEEDGRAIEYFLCRAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0105239_1217534513300010375Corn RhizosphereERMEDDREPYKPLWAASLRREAAPKPEAAPKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0134127_1168552213300010399Terrestrial SoilMEDDREPYEPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWALYVP*
Ga0150985_10415941713300012212Avena Fatua RhizosphereLDDREPYKPLWAESLRREASPKPEAAAKPKPPSFRSRPVLAIVAVVVCAVLVGAIVSDDSDRVTFAHLPSYWESVEMTCATLRIEEDDRTIEIFRCKAQGAGQLPPGSYRPPETNWNSDFDRRPATDHAIRISANGVVVGWALYVP*
Ga0164241_1052800513300012943SoilMEGDREPYKPLWAESLRREASPKPEAAANPKPPPFRASPALAIVALVMFGVLLSVIVNDDSSRVTFAKLPSYWGSVEMTCATVRVEGDGRAREYFFCKAQGAGQLPPGDYRPPETNWRSDFDRRPATDHAIRISPNGVVLGWALYVP*
Ga0157380_1196915513300014326Switchgrass RhizosphereMEDDREPYKPLWAASLRREAAPKPEAAPKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEGDGRAVEYFYCKAQGAGRLPPGDYRPPETNWRSDFDRRRATDHVIRISSNGVVLGWARYVP*
Ga0182001_1020344713300014488SoilMDDDREPYEPLWAESLRKEPSPKPEAAAKPKLPSFRAGLALAIVALVAFAVLGATDSDDSGGVTFANLPSYWGSVEMRCAAVRVERNDRTLEIFRCKAQGAGQLPPGAYRPPETNWNSDFDRRPATDHAIRISPNGVVLGWALYVP*
Ga0157377_1041914713300014745Miscanthus RhizosphereMEDDREPYKPLWAESLRREASPKPEAAAKPKPSSFRARPALAIVALVVFAGLLGVIVNDDLSRVTFADLPSYWESVEMTCATVRVEQDDRAVEYFYCKAQGAGRLPPGDYRPPETNWRSDFDRRRATDHVIRISSNGVVLGWARYVP*
Ga0132257_10365395613300015373Arabidopsis RhizosphereEGMEDDREPYKPLWAEGLRREASPQPEAAAKPKPPSFRARPALAIVALIMFGILLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHVIRISSNGVVLGWARYVP*
Ga0132255_10081579823300015374Arabidopsis RhizosphereMDDDREPYEPLWAESLRRTPSPKPEAAAKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP*
Ga0163161_1167237213300017792Switchgrass RhizosphereMEDDREPYKPLWAESLRREASPKPEAAAKPKPPSFRARPALAIVALIMFGILLGVIVSDDPSRVTFAELPSYWGSVEMTCATVRVEEDDRALELFRCKAQGGGRLPPGDYRPPETNWRSDFDRRRATDHVIRISSNGVVL
Ga0163161_1173189523300017792Switchgrass RhizosphereWAESLRREASPKPEAAAKPKPPSFPRRPALAIVALVVFAVLVGAIVSDDSGRVTFAHLPSYWESVEMTCATVRIEEDDRTIEIFRCKARGVGQLPPGSYRPPETNWNSDFDRRPATDHAIRISPNGVVVGWALYVP
Ga0190265_1049247623300018422SoilMDDDREPYEPLWAESLRREASPKPEAAAKPKPPSFPARPALAIVALVVFAVLLGAIVSDDSSRVTFANLPSYWESVEMTCATVRIEEDDRTLEFFRCKAQGAGQLPPGAYRPPETNWNSDFDRRPATDHVIRISPNGVVVGWALYVP
Ga0190265_1202354113300018422SoilWAESLRREASPKPEAAANPKPPSFQANPALAIVALVVFGVLLSVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEEEGRALEFFFCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0190272_1189373413300018429SoilMADDREPYEPLWAKGLRRKPAPKPEAPAKPKTRSFPAGPALAMVALVALGVLFGVIVNTQSSRVTIADLESYWGNVEMTCDTVRIEEDDRALEVFRCHAQGAGQLPPGAYRPPETHWNSDFDRRRATDHAIRISPTGEVLGWALYVP
Ga0190275_1012897833300018432SoilMEDDREPYKPLWAESLRREASPKPEAAANPKPPSFQANPALAIVALVVFGVLLSVIVNDDSSRVTFAKLPSYWGSVAMTCATVRVEGDGRAREYFFCKAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0190275_1028536713300018432SoilMDDDREPYEPLWAESLRREASPKPEAAANPKPPSFPARPALAIVVLVAFAVLLGVIVSDPSGRVTFANLPSYWGSVKMTCATVRIEEDDRTLEFFRCKAQGAGQLPPGAYRPPETNWNSDFDRRRATDHAIRISPNGVVLGSALYVP
Ga0190275_1088210013300018432SoilMADDREPYEPLWAEGLRRKPALKPEAPAKPEAPSFPAGPALAMVAVVACGVLFGVIFSAQSSSRFTIADLESYWGNVEMTCATVRIEEDDRALEIFRCHAQGAGQLPPGTYRPPESNWNSDFDRRPAADHAIKISPTGEVLGWALYVP
Ga0190269_1134200413300018465SoilQPEAPAKPKPPSFPAGPALALLALVAVAVLIGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEEEGRALEFFFCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0190268_1072092013300018466SoilMEDDREPYEPLWAERLRREASPKPEPAAKPKPPSFRARPALAIVALVVFGVLLSVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEEEGRALEFFFCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0190270_1012945823300018469SoilMADDREPYEPLWLESLRRTPSPKPEALAKPKPPSFPAGPALAIVALVAFAVLLGVIVSAHSSRVTFADLPSYWGSVEMTCATVRIEEDDRTLEFFRCNAQGAGQLPPGAYRPPETNWNSDFDRRRA
Ga0190270_1133530813300018469SoilMDDDREPYEPLWAESLRRTASAKPEAPAKPKPPSFPAGPALAIVALVLFAVLLGVIVSDDSSRVNFADLPSYWESVEMTCATVRIEEDDRTLEFFRCKAQGAGQLPPGAYRPPETNWNSDFDRRQATDHAIRISPNGVVLGWALYVP
Ga0190274_1120336213300018476SoilMADDREPYEPLWLESLRRTPSPKPEALAKPKPPSFPAGPALAIVALVAFAVLLGVIVSAHSSRVTFADLPSYWGSVEMTCATVRIEEDDRTLEFFRCNAQGAGQLPPGTYRPPESNWNSDFDRRPAADHAIEISPTGEVLGWALYVP
Ga0190271_1000913943300018481SoilMEDDREPYKPLWAASLRREASPKPEAAAKPRPPSFRARPALVIAALIVLVVLLGVIVDDDSSRVTFAKLPSYWGSVEMTCATVRVEEDGRAVEYFYCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHVIRISSNGVVLGWARYVP
Ga0190273_1198800913300018920SoilERMDDDREPYEPLWAESLRREPSPKPEGPAKPKRPSFPAKPVLALVAVVAVAVLLGVILTDHSGRVTFANLPSYWGSVEMTCATVRIEEDDRTLEYFRCKAQGAGQLPPGAYRPPETNWNSDFDRRRATDHAIRISPTGEVLGWALYVP
Ga0190264_1040256013300019377SoilMDDDREPYEPLWAESLRREASPKPEPATMPKPPSFRARPALAIVALVVFGVLLSVIVSDDSSRVTFAELPSYWGSVEMTCATVRVEEDGRALEFFFCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0196958_1002856023300020181SoilMEDDREPYKPLWAERLRREASPKPEPAAKPKPPSFRARPALAILALVVFGVLLSVIVSDDSSRVTFAILPSYWGSVEMRCATVRVEAEGRAREFFFCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0196959_1017084713300021184SoilMEDDREPYKPLWAESLRREGSPKPEAAAKPKPPSFRARPALAIVALVVFGVLLSVIVNDDSSRFTFAKLPSYWGSVEMTCATVRVEEDGRALEFFFCKAQDAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGW
Ga0207642_1020213623300025899Miscanthus RhizosphereEAAAKPKPPSFPRRPALAIVALVVFAVLVGAIVSDDSGRVTFAHLPSYWESVEMTCATVRIEEDDRTIEIFRCKAQGAGQLPPGTYRPPETNWNSDFDRRRATDVTIRISPTGKVLGWALYVP
Ga0207705_1022259513300025909Corn RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0207687_1031593023300025927Miscanthus RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWNSDFDRRRATDYAIRISPTGKVLGWALYVP
Ga0207690_1180567013300025932Corn RhizosphereMDDDREPYEPLWAESLRREASPKPEAAAKPKPPSFPRRPALAIVALVVFAVLVGAIVSDDSGRVTFAHLPSYWESVEMTCATVRIEGDDRTIEIFRCKAQGAGQLPPGTYRPPETNWNSDFDRRPATDHAIRISPNGVVLGWALYVP
Ga0207709_1106937213300025935Miscanthus RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEGDGRAVEYFYCKAQGAGRLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0207679_1054083423300025945Corn RhizosphereMEDDREPYKPLWAESLRRGASPKPEAATKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0207679_1181573613300025945Corn RhizosphereMDDDREPYEPLWAESLRKEPSPKPEAAARPKKLPSFRAGLALAIVALVAFAALGATDSDDSGGVTFANLPSYWGSVEMRCATVRIERNDRTLEIFRCKAQGAGQLPPGAYRPPETNWNSDFDRRPATDHAIRISPNGVVL
Ga0207712_1137468113300025961Switchgrass RhizospherePEAAPKPKPPSFRARPTLAIAALVVLVVLLGVIVDDDSSRVTFAKLPSYWGSVEMTCATVRVEGDGRAIEYFYCKAQGAGRLPPGDYRPPETNWNSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0207640_1090419313300025981Corn RhizosphereMEDDREPYEPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIVALIMFGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0207678_1188699313300026067Corn RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIVALIMLGVLLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGIVLGWARY
Ga0207676_1104000513300026095Switchgrass RhizosphereMEDDREPYDPLWAESLRRAASPKPEAAAKPKLPSFRASPALAIVALVMLGVLLGVIVSDDPSRVTFAELPSYWESVEMTCATVRVEEDGRALEYFLCRARGAGRLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGIVLGWARYVP
Ga0207675_10218816313300026118Switchgrass RhizosphereMEDDREPYKPLWAESLRREASPKPETAAKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEGDGRAIEYFYCKAQGAGRLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0207675_10261072313300026118Switchgrass RhizosphereMDDDREPYEPLWAESLRKEPSPKPEAAARPKKLPSFRAGLALAIVALVAFAALGATDSDDSGGVTFANLPSYWGSVEMRCATVRIERNDRTLEIFRCKAQGAGQLPPGAYRPPETNWNSDFDRRPATDHAIRISPNGVVLGWALYVP
Ga0207683_1050337323300026121Miscanthus RhizosphereMEDDREPYKPLWAESLRRGASPKPEAAAKPKPPSFRARPALAIVALIMFGILLGVIVSDDPSRVTFAELPSYWGSVEMTCATARVEEDGRALEYFLCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0207428_1064967923300027907Populus RhizosphereMEDDREPYKPLWAASLRREASPKPEAAPKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEEDGRAIEYFLCRAQGAGELPPGEYRPPESNWRSDFDRRRATDHAIRISPNGVVL
Ga0209382_1187803013300027909Populus RhizosphereVADSTKRSSPAGLSRYLTATARRVRSRGAAGLACGGRMEDDREPYKPLWAESLRREASPKPEGAAKPKPPSLRARPALAIVALIVFGVLLGLIVSDDSSRVTFAELPSYWGSVEMTCATVRVEEDGRALEFFLCKAQGAGQLPPGDYRPPESNWRSDFDRRPATDHAIRISPNGVVLGWARYVP
Ga0247828_1102050513300028587SoilMEDDREPYKPLWAASLRREASPKPEAAPKPKPPSFRARPALAIAALVVFAVLLGVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEEDGRAIEYFLCRAQGAGQLPPGDYRPPESNWRSDFDRRRATDHAIRISPNGVVLGWARYVP
Ga0307503_1076596913300028802SoilVERMDDDREPYEPLWAESLRREPSPKPEAPAKPKPRSFPAGPALAIVALVAFAVLVGVIVGGDSSRVTFADLPSYWESVEMTCATVRIEEDDRTFEFFRCNTQGAGQLPPGDYRPPETNWNSDFDRRRATDHAIRISPTGEVRGWALYVP
Ga0299907_1019721223300030006SoilMADDREPYEPLWLESLRREASPKPEAAAKPKPPSFPAGPALAIVALVAFAVLLGVIVSAHSSRVTFADLPSYWGSVEMTCATVRSEEDDRTLEVFRCNAQGAGQLPPGDYRPPETNWNSDFDRRPATDHAIRISPTGEVFGWALYVP
Ga0307499_1026134313300031184SoilMETMDDDREPYEPLWAESLRREASPKPEAAAKPKPPSFPSRPALAIVALVVFAVLLGAIVSDDSNRVSFADLPSYWESVEMTCATVRIEEDDRTLEFFRCKAQGAGQLPPGAYRPPETNWNSDFDRRRATDHAIRISANGVVLGWARYVP
Ga0299913_1017656613300031229SoilKPKPSSFPAGPALALLALVAFALLLGVIVSDHSSRVTFADLPSYWGSVEMTCATVRIEEDDRTFEFFRCNAQGAGQLPPGAYRPPETNWNSDFDRRRATDHAIRISPNGVVLGWALYVP
Ga0299913_1111026523300031229SoilMEDDREPYEPLWAESLRREASPRPEAAAKPKPPSFPARPVLAIVALVVFAVLLGVIVSDDSSRVTFDDLPSYWGSVEMTCATLRIEEDDRTLEFFRCNAQGDGQLPPGAYRPPETNWNSDFDRRRATDHVIRISPTGKLVGWALYVP
Ga0307406_1074709513300031901RhizosphereMEDDREPYKPLWAESLRREASPKPEAAANPKLPSFQANPALAIVALVVFGVLLSVIVSDDSSRVTFAKLPSYWGSVEMTCATVRVEEEDGRTREFFFCKAQGAGQLPPGDYRPPETNWRSDFDRRRATDHAIRISPNGVVLGRAR
Ga0307416_10214850113300032002RhizosphereYEPLWAESLRREASPKPEAAANPKPPSFPARPALAIVALVVLAVLLGVIVSDDSSRVTFADLPSYWGSVEMTCATVRVEEDDRTLEFFRCKAQGAGQLPPGAYRPPETNWNSDFDRRRATDHVIRISPTGVVLGWALYVP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.