Basic Information | |
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Family ID | F089018 |
Family Type | Metagenome |
Number of Sequences | 109 |
Average Sequence Length | 44 residues |
Representative Sequence | MKINDERIQEWIDKCPEHDNELLHSDDNGIVIVIRFNNEKEE |
Number of Associated Samples | 75 |
Number of Associated Scaffolds | 109 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 80.73 % |
% of genes near scaffold ends (potentially truncated) | 14.68 % |
% of genes from short scaffolds (< 2000 bps) | 82.57 % |
Associated GOLD sequencing projects | 61 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (55.963 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (49.541 % of family members) |
Environment Ontology (ENVO) | Unclassified (82.569 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (91.743 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 23.81% β-sheet: 21.43% Coil/Unstructured: 54.76% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Marine Surface Seawater Aqueous Marine Surface Water Surface Seawater Sea-Ice Brine Salt Marsh Marine Marine Water Seawater Deep Subsurface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI24003J15210_101482992 | 3300001460 | Marine | MINDEAIQEWIDKCPEHDHELLHSDADGIVLCIRFPNEPEKQKGETKR* |
JGI24005J15628_102007911 | 3300001589 | Marine | EWIDKCPEHDHELLHSDADGIVLCIRFPNEPEKQKGETKR* |
GOS2262_10304892 | 3300001942 | Marine | MEINDERIQEWVDKCPEHDNEILHSDDNGIVMVIRFNNEKEEE* |
GOS2234_10596212 | 3300001964 | Marine | MEINDERIQEWIDKCPEHDNEILHSDDNGIVVVIRFNNEKEE* |
JGI25127J35165_10074072 | 3300002482 | Marine | MKINDERIKDWVEKCPEHDHELLHSDDNGIVMVVRFNNTEEEDENK* |
JGI25127J35165_10301723 | 3300002482 | Marine | MDVNDERIKEWIEKCPEHDNELLHSDDNGIVMVIRFNNQKEED* |
JGI25127J35165_10848882 | 3300002482 | Marine | MKINDKQISKWLEECPEHDHELLHSDDDGIVIVIRFNNQKEEE* |
JGI25132J35274_11188712 | 3300002483 | Marine | MLSCKIMEINDKQISKWLEECPEHDHELLHSDDDGIVVVIRFNNQKEED* |
JGI25128J35275_10281953 | 3300002488 | Marine | MEINDKQISKWLEECPEHDHELLHSDDDGIVVVIRFNNQKEEX* |
Ga0068515_1225603 | 3300004829 | Marine Water | MEINDKQISKWLEECPEHDHELLHSDDDGIVVVIRFNNQKEED* |
Ga0069134_1618534 | 3300004831 | Surface Seawater | MEINDERIKEWIEKCPEHDNELLHSDDNGIVIVVRFNNEKEEE* |
Ga0078893_113132781 | 3300005837 | Marine Surface Water | MEINDERIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEEE* |
Ga0099675_10114153 | 3300006334 | Marine | MKINDERIKEWIDKCPEHDNELLHSDDDGIVIVVRFNNIKEDE* |
Ga0098038_10257112 | 3300006735 | Marine | MEINDERIQEWIDKCPEHDNELIHSDDNGIVIVVRFNNEKEE* |
Ga0098038_10386894 | 3300006735 | Marine | MEINDDRIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEEE* |
Ga0098038_10754871 | 3300006735 | Marine | WVDKCPEHDNELLHSDDNGIVIVIRFNNEKENE*VEIYI* |
Ga0098038_11519453 | 3300006735 | Marine | MKINDDRIKEWIDKCPEHDNELLHSDYNGIVIVIRFNNEKEDE* |
Ga0098038_11681402 | 3300006735 | Marine | MKINDDRIKEWIDKCPEHDNELLHSDDNGIVIVIRFNNEKEDE*Y* |
Ga0098038_11847864 | 3300006735 | Marine | MKINDDRIKEWIDKCPEHDNELLHSDDNGIVVVIRFNNEPESEE* |
Ga0098038_12765832 | 3300006735 | Marine | RNIDMEINDERIKEWINKCPEHDNELLHSDDNGIVIVIRFNNQKED* |
Ga0098037_11214023 | 3300006737 | Marine | MKINDDRIKEWIDKCPEHDNELLHSDDNGIVIVIRFNNEKENK* |
Ga0098037_11700982 | 3300006737 | Marine | MEINDERIKEWIDKCPEHDNELLHSDDNGIVVVIRFNNEKEKDV* |
Ga0098042_10081767 | 3300006749 | Marine | MKINDERIQEWIDKCPEHDNELLHSDDNGIVIVIRFNNEKENK* |
Ga0098042_10515724 | 3300006749 | Marine | MEINDERIKEWIDKCPEHDNELLHSDDNGIVVVIRFNNEKEESNDT* |
Ga0098042_10697542 | 3300006749 | Marine | MIYDSRIEEWLDRCPEHDNEILHSDADGIVVVIRFNNQKEEDEEKN* |
Ga0098048_11052812 | 3300006752 | Marine | MEINDERIKEWINKCPEHDNELLHSDDNGIVIVIRFNNQKED* |
Ga0098054_13433563 | 3300006789 | Marine | EWIDKCPEHDNELLHSDDNGIVVVIRFNNEKEEDV* |
Ga0098060_10495845 | 3300006921 | Marine | MKINDDRIKEWIDKCPEHDNELLHSDDNGIVVVIRFNNEKEESNDT* |
Ga0098060_10699425 | 3300006921 | Marine | LMEINDERIQEWIDKCPEHDNELIHSDDNGIVIVVRFNNEKEE* |
Ga0098041_11179915 | 3300006928 | Marine | MEINDEKIQEWIDKCPEHDNELIHSDDNGIVIVVRFNNEKEE* |
Ga0098036_10549973 | 3300006929 | Marine | MKINDDRIKEWIDKCPEHDNELLHSDDNGIVIVIRFNNEKEDE* |
Ga0098036_12538443 | 3300006929 | Marine | MEINDERIKEWIDKCPEHDNELLHSDDNGIVVVIRFNN |
Ga0070747_12513492 | 3300007276 | Aqueous | MINDEAIQEWIDKCPEHDHELLHSDADGIVLCIRFPNEPEEKDE* |
Ga0110931_11623901 | 3300007963 | Marine | MEINDERIQEWIDKCPEHDNELIHSDDNGIVVVVRFNNEKE |
Ga0114904_10508762 | 3300008218 | Deep Ocean | MEINDERIQEWIDKCPEHDNEILHSDDNGIVVVIRFNNEKENE* |
Ga0114910_10606092 | 3300008220 | Deep Ocean | MKINDDRIKEWIDKCPEHDNELLHSDDNGIVIVVRFNNEKEDE* |
Ga0114996_111833931 | 3300009173 | Marine | MINDEAIQEWIDKCPEHDHELLHSDADGIVLCIRFPNEPEEKNE* |
Ga0114909_10315544 | 3300009414 | Deep Ocean | MKINDDRIKEWIDKCPEHDNELLHSDDNGIVIVVRFNNIKEED* |
Ga0114915_11336772 | 3300009428 | Deep Ocean | MINDEAIQEWIAKCPEHDHELLHSDADGIVLCIRFPNEPEKESE* |
Ga0114932_102380244 | 3300009481 | Deep Subsurface | MKINDDRIKEWIDKCPEHDNELLHSDDDGIVIVVRFNNIKEDE* |
Ga0114932_106078782 | 3300009481 | Deep Subsurface | MKINDERIKDWVEKCPEHDHELLHSDDNGIVMVVRFNNTEEEDEDQ* |
Ga0114933_100725934 | 3300009703 | Deep Subsurface | MKINDERIKDWIEKCPEHDHELLHSDDNGIVMVVRFNNTEEEDEDQ* |
Ga0114933_110349902 | 3300009703 | Deep Subsurface | MKINDERIKEWIDKCPEHDNELLHSDDNGIVMVIRFNNEKEDE* |
Ga0098043_10265396 | 3300010148 | Marine | MEINDERIKEWIDKCPEHDNELLHSDDNGIVVVIRFNNEKEEDV* |
Ga0098059_10767356 | 3300010153 | Marine | SKLQGALMEINDEKIQEWIDKCPEHDNELIHSDDNGIVIVVRFNNEKEE* |
Ga0160423_101584331 | 3300012920 | Surface Seawater | MEINDERIQEWVDKCPEHDNEILHSDDNGIVMVIRFNN |
Ga0160423_101779553 | 3300012920 | Surface Seawater | MEINDERIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEE* |
Ga0116836_10411693 | 3300013181 | Marine | MINDERIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEEE* |
Ga0181433_10859852 | 3300017739 | Seawater | MKINDERIKEWIDKCPEHDNELLHSDDNGIVIVVRFNNEKEDE |
Ga0181418_11833551 | 3300017740 | Seawater | MKINDDRIKEWIDKCPEHDNELLHSDDDGIVIVPF |
Ga0181413_10465972 | 3300017765 | Seawater | MKINDDRIKEWIDKCPEHDNELLHSDDDGIVIVVRFNNIKEDE |
Ga0181423_12551502 | 3300017781 | Seawater | MKINDDRIKEWIDKCPEHDNELLHSDDNGIVIVVRFNNEKEDEXKSIHLKD |
Ga0181576_1000601816 | 3300017985 | Salt Marsh | MINDERIQEWIDKCPEHDNEILHSDDNGIDMVIRINNEKEEE |
Ga0181569_106599191 | 3300017986 | Salt Marsh | MIYDSRIEEWLDKCPEHDNEILHSDDNGIVVVIRFNNEKEEDE |
Ga0181569_108909502 | 3300017986 | Salt Marsh | MINDERIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEEEXYHTK |
Ga0181566_105111311 | 3300018426 | Salt Marsh | MINDERIQELIDKCPEHDNEILHSDDNGIVMVIRFNNEKEEE |
Ga0181568_100471426 | 3300018428 | Salt Marsh | MINDERIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEEE |
Ga0211707_10174144 | 3300020246 | Marine | MINDEKIQEWIDKCPEHDNEILHSDDNGIVVVIRFNNEKEEEXESIHF |
Ga0211519_10793472 | 3300020266 | Marine | MEINDERIKEWIEKCPEHDNELLHSDDNGIVIVVRFNNEKEEE |
Ga0211483_101441814 | 3300020281 | Marine | MEINDERIKEWVDKCPEHDNEILHSDDNGIVMVIRFNNEKEDEXLE |
Ga0211636_100151388 | 3300020400 | Marine | MKINDERIQEWVDKCPEHDNELLHSDDNGIVIVVRFNNEKED |
Ga0211659_100152637 | 3300020404 | Marine | MEINDERIKEWIDKCPEHDNELLHSDDNGIVVVIRFNNEKEEDV |
Ga0211659_100156908 | 3300020404 | Marine | MKINDERIQEWIDKCPEHDNELLHSDDNGIVIVIRFNNEKENE |
Ga0211587_103529293 | 3300020411 | Marine | MEINDERIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEE |
Ga0211516_102038282 | 3300020413 | Marine | MKINDERIKEWIEKCPEHDNELLHSDDNGIVIVVRFNNEKEDE |
Ga0211622_103981732 | 3300020430 | Marine | MEINDERIQEWVDKCPEHDNEILHSDDNGIVMVIRFNNEKEEE |
Ga0211708_102338103 | 3300020436 | Marine | MKINDERIKEWINKCPEHDNELLHSDDNGIVIVIRFNNEKEDE |
Ga0211708_102344803 | 3300020436 | Marine | MINDDRIQEWIDKCPEHDNEILHSDDNGIVVVIRFNNEKEKE |
Ga0211558_102820253 | 3300020439 | Marine | MEINDERIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEEEXHQMK |
Ga0211518_100846123 | 3300020440 | Marine | MKINDERIKDWIEKCPEHDHELLHSDDNGIVMVVRFNNTEEEDEDQ |
Ga0211559_105748393 | 3300020442 | Marine | WVDKCPEHDNEILHSDDNGIVMVIRFNNEKEEEXYHMK |
Ga0211475_104276002 | 3300020468 | Marine | MKINDERIKEWIEKCPEHDNELLHSDDNGIVIVVRFNNEKEEE |
Ga0211614_102129294 | 3300020471 | Marine | MEINDERIQKWIDKCPEHDNEILHSDDNGIVVVIRFNNEKEE |
Ga0224906_11309622 | 3300022074 | Seawater | MEINDERIKEWIEKCPEHDNELLHSDDNGIVIVIRFNNEKEEE |
Ga0255759_100470471 | 3300023178 | Salt Marsh | RIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEEE |
Ga0207905_10035996 | 3300025048 | Marine | MINDEAIQEWIDKCPEHDHELLHSDADGIVLCIRFPNEPEKESE |
Ga0208157_10290763 | 3300025086 | Marine | MEINDDRIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEEE |
Ga0208157_10413374 | 3300025086 | Marine | MKINDDRIKEWIDKCPEHDNELLHSDYNGIVIVIRFNNEKEDE |
Ga0208669_10582881 | 3300025099 | Marine | MKINDDRIKEWIDKCPEHDNELLHSDDNGIVIVIRFNNEKEDE |
Ga0208159_10032308 | 3300025101 | Marine | MKINDERIQEWIDKCPEHDNELLHSDDNGIVIVIRFNNEKENK |
Ga0208159_10179537 | 3300025101 | Marine | MEINDERIKEWIDKCPEHDNELLHSDDNGIVVVIRFNNEKEESNDT |
Ga0208159_10255852 | 3300025101 | Marine | MEINDERIKEWIDKCPEHDNELLHSDDNGIVVVIRFNNEKEEDVXYLMMSL |
Ga0208159_10750542 | 3300025101 | Marine | MIYDSRIEEWLDRCPEHDNEILHSDADGIVVVIRFNNQKEEDEEKN |
Ga0208666_10568603 | 3300025102 | Marine | MEINDERIQEWIDKCPEHDNELIHSDDNGIVIVVRFNNEKEE |
Ga0208666_10627933 | 3300025102 | Marine | MEINDKQISKWLEECPEHDHELLHSDDDGIVVVIRFNNQKEED |
Ga0208158_11398183 | 3300025110 | Marine | MKINDERIQEWIDKCPEHDNELLHSDDNGIVIVIRFNNEKEE |
Ga0209349_10581351 | 3300025112 | Marine | MKINDERIKEWIDKCPEHDNELLHSDDNGIVIVIRFNNEKEDE |
Ga0209348_10058676 | 3300025127 | Marine | MKINDERIKDWVEKCPEHDHELLHSDDNGIVMVVRFNNTEEEDENK |
Ga0209348_10168112 | 3300025127 | Marine | MLSCKIMKINDKQISKWLEECPEHDHELLHSDDDGIVIVIRFNNQKEEE |
Ga0209348_10289344 | 3300025127 | Marine | MDVNDERIKEWIEKCPEHDNELLHSDDNGIVMVIRFNNQKEED |
Ga0209348_10469881 | 3300025127 | Marine | MEINDERIKEWIDKCPEHDNELLHSDDNGIVMVVRFNNEKENE |
Ga0209348_10501281 | 3300025127 | Marine | MLSCKIMEINDKQISKWLEECPEHDHELLHSDDDGIVVVIRFNNQKEED |
Ga0209348_11861303 | 3300025127 | Marine | MEINDERIKEWIDKCPEHDNELLHSDDNGIVMVVRFNNEKEN |
Ga0209232_12273541 | 3300025132 | Marine | MIYDDDMKDWIEKCPHHDNEILHSDDNGIVMCIRFNNEKEEDKP |
Ga0209645_10504472 | 3300025151 | Marine | MINDERVQEWIDKCPEHDNEILHSDDNGIVVVIRFNNEKEEE |
Ga0208032_11048112 | 3300025266 | Deep Ocean | MINDEAIQEWIAKCPEHDHELLHSDADGIVLCIRFPNEPEKESE |
Ga0208030_10258454 | 3300025282 | Deep Ocean | MKINDDRIKEWIDKCPEHDNELLHSDDNGIVIVVRFNNEKEDE |
Ga0208181_10997082 | 3300025300 | Deep Ocean | MEINDERIQEWIDKCPEHDNEILHSDDNGIVVVIRFNNEKENE |
Ga0183683_100155712 | 3300029309 | Marine | MEINDERIKEWINKCPEHDNELLHSDDNGIVIVIRFNNQKED |
Ga0183683_10051288 | 3300029309 | Marine | MKHKCTGINDERIQEWVDKCPEHDNEILHSDDNGIVVVIRFNNEKEE |
Ga0183683_10405723 | 3300029309 | Marine | MEINDERIKEWIDKCPEHDNELLHSDDNGIVMVIRFNNEKED |
Ga0185543_10615802 | 3300029318 | Marine | MEINDERIQEWIDKCPEHDNEILHSDDNGIVMVIRFNNEKEEXXENIHL |
Ga0183748_100104718 | 3300029319 | Marine | MEINDERIKEWVDKCPEHDNEILHSDDNGIVMVIRFNNEKEDE |
Ga0183748_10128046 | 3300029319 | Marine | MLSCKIMKINDKQISKWLEECPEHDHELLHSDDDGIVVVIRFNNQKEED |
Ga0310343_109675491 | 3300031785 | Seawater | MKINDERIKEWIDKCPEHDNELLHSDDNGIVMVVRFNNEKENE |
Ga0302127_103961942 | 3300032151 | Marine | MINDEAIQEWIDKCPEHDHELLHSDADGIVLCIRFPNEPEEKNE |
Ga0314858_056193_635_781 | 3300033742 | Sea-Ice Brine | MINDEAIQEWIDKCPEHDHELLHSDADGIVLCIRFPNEPEKQKGETKR |
Ga0314858_093896_372_509 | 3300033742 | Sea-Ice Brine | MINDEAIQEWIDKCPEHDHELLHSDADGIVLCIRFPNEPEEKKDD |
Ga0314858_139973_2_145 | 3300033742 | Sea-Ice Brine | EERGVNDEAIQEWIDKCPEHDHELLHSDADGIVLCIRFPNEPEEKNE |
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