NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F088889

Metagenome / Metatranscriptome Family F088889

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088889
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 72 residues
Representative Sequence MKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNS
Number of Associated Samples 100
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 49.54 %
% of genes from short scaffolds (< 2000 bps) 44.95 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (86.239 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine
(29.358 % of family members)
Environment Ontology (ENVO) Unclassified
(43.119 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(55.046 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 57.97%    β-sheet: 0.00%    Coil/Unstructured: 42.03%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF136402OG-FeII_Oxy_3 0.92



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A86.24 %
All OrganismsrootAll Organisms13.76 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003490|JGI25926J51410_1086611Not Available508Open in IMG/M
3300004790|Ga0007758_11073349Not Available507Open in IMG/M
3300005517|Ga0070374_10239026Not Available930Open in IMG/M
3300005662|Ga0078894_11220267Not Available636Open in IMG/M
3300006484|Ga0070744_10060164All Organisms → Viruses → Predicted Viral1108Open in IMG/M
3300006875|Ga0075473_10022769All Organisms → Viruses → Predicted Viral2408Open in IMG/M
3300007545|Ga0102873_1110276Not Available832Open in IMG/M
3300007546|Ga0102874_1172689Not Available667Open in IMG/M
3300007549|Ga0102879_1240264Not Available542Open in IMG/M
3300007554|Ga0102820_1034243All Organisms → Viruses → Predicted Viral1241Open in IMG/M
3300007600|Ga0102920_1040381All Organisms → Viruses → Predicted Viral1444Open in IMG/M
3300007644|Ga0102902_1082709Not Available961Open in IMG/M
3300007667|Ga0102910_1012982All Organisms → Viruses → Predicted Viral1862Open in IMG/M
3300008999|Ga0102816_1169639Not Available678Open in IMG/M
3300009026|Ga0102829_1130937Not Available796Open in IMG/M
3300009080|Ga0102815_10804730Not Available535Open in IMG/M
3300009152|Ga0114980_10525371Not Available672Open in IMG/M
3300009154|Ga0114963_10690471Not Available529Open in IMG/M
3300009159|Ga0114978_10593745Not Available640Open in IMG/M
3300009159|Ga0114978_10658288Not Available600Open in IMG/M
3300009161|Ga0114966_10345124Not Available887Open in IMG/M
3300009164|Ga0114975_10536543Not Available628Open in IMG/M
3300009180|Ga0114979_10185260Not Available1266Open in IMG/M
3300012352|Ga0157138_1035311Not Available792Open in IMG/M
3300013087|Ga0163212_1136646Not Available778Open in IMG/M
3300014050|Ga0119952_1103639Not Available663Open in IMG/M
3300017761|Ga0181356_1053675All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1384Open in IMG/M
3300017766|Ga0181343_1116641Not Available752Open in IMG/M
3300020151|Ga0211736_10027773Not Available1257Open in IMG/M
3300020151|Ga0211736_10029885Not Available696Open in IMG/M
3300021600|Ga0194059_1111132Not Available849Open in IMG/M
3300022190|Ga0181354_1115523Not Available866Open in IMG/M
3300022752|Ga0214917_10093475All Organisms → Viruses → Predicted Viral1782Open in IMG/M
3300023174|Ga0214921_10233040All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1103Open in IMG/M
3300023174|Ga0214921_10518383Not Available560Open in IMG/M
3300024348|Ga0244776_10888700Not Available529Open in IMG/M
3300025744|Ga0255245_1031600Not Available667Open in IMG/M
3300027148|Ga0255115_1009538All Organisms → Viruses → Predicted Viral2136Open in IMG/M
3300027156|Ga0255078_1059482Not Available757Open in IMG/M
3300027217|Ga0208928_1038657Not Available738Open in IMG/M
3300027231|Ga0208172_1008508All Organisms → Viruses → Predicted Viral2107Open in IMG/M
3300027260|Ga0208027_1051405Not Available827Open in IMG/M
3300027416|Ga0207994_1054958Not Available806Open in IMG/M
3300027486|Ga0255086_1074067Not Available514Open in IMG/M
3300027710|Ga0209599_10017868All Organisms → Viruses → Predicted Viral2033Open in IMG/M
3300027734|Ga0209087_1033350All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2447Open in IMG/M
3300027763|Ga0209088_10107683Not Available1271Open in IMG/M
3300027769|Ga0209770_10097609All Organisms → Viruses → Predicted Viral1212Open in IMG/M
3300027772|Ga0209768_10254904Not Available758Open in IMG/M
3300027782|Ga0209500_10343146Not Available619Open in IMG/M
3300028027|Ga0247722_10006926All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5153Open in IMG/M
3300031951|Ga0315904_10779933Not Available790Open in IMG/M
3300033992|Ga0334992_0456341Not Available562Open in IMG/M
3300034068|Ga0334990_0529660Not Available625Open in IMG/M
3300034166|Ga0335016_0121162All Organisms → Viruses → Predicted Viral1836Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine29.36%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake16.51%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater13.76%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake11.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.09%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton2.75%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.75%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine2.75%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface2.75%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.83%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.92%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.92%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.92%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.92%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.92%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003490Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300003491Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300004790Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006875Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007545Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3EnvironmentalOpen in IMG/M
3300007546Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02EnvironmentalOpen in IMG/M
3300007549Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02EnvironmentalOpen in IMG/M
3300007554Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709EnvironmentalOpen in IMG/M
3300007600Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3EnvironmentalOpen in IMG/M
3300007606Estuarine microbial communities from the Columbia River estuary - metaG 1569-02EnvironmentalOpen in IMG/M
3300007617Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02EnvironmentalOpen in IMG/M
3300007622Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02EnvironmentalOpen in IMG/M
3300007627Estuarine microbial communities from the Columbia River estuary - metaG 1546A-02EnvironmentalOpen in IMG/M
3300007644Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02EnvironmentalOpen in IMG/M
3300007658Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3EnvironmentalOpen in IMG/M
3300007667Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3EnvironmentalOpen in IMG/M
3300007706Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3EnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008261Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NAEnvironmentalOpen in IMG/M
3300008996Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747EnvironmentalOpen in IMG/M
3300008999Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545EnvironmentalOpen in IMG/M
3300009026Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575EnvironmentalOpen in IMG/M
3300009049Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02EnvironmentalOpen in IMG/M
3300009051Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009080Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759EnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009187Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaGEnvironmentalOpen in IMG/M
3300009194Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RTEnvironmentalOpen in IMG/M
3300010374Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S-1-Day17EnvironmentalOpen in IMG/M
3300012352Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37EnvironmentalOpen in IMG/M
3300013087Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30LEnvironmentalOpen in IMG/M
3300014050Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007BEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020578Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35mEnvironmentalOpen in IMG/M
3300021600Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11mEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024480Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024481Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024485Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025744Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_0h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025749Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025763Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027121Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8hEnvironmentalOpen in IMG/M
3300027123Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8dEnvironmentalOpen in IMG/M
3300027127Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8hEnvironmentalOpen in IMG/M
3300027148Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepB_8hEnvironmentalOpen in IMG/M
3300027156Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8hEnvironmentalOpen in IMG/M
3300027193Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)EnvironmentalOpen in IMG/M
3300027212Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027217Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027227Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027231Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027253Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027260Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027294Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027311Estuarine microbial communities from the Columbia River estuary - metaG 1569-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027320Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)EnvironmentalOpen in IMG/M
3300027416Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757 (SPAdes)EnvironmentalOpen in IMG/M
3300027486Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_8dEnvironmentalOpen in IMG/M
3300027525Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705 (SPAdes)EnvironmentalOpen in IMG/M
3300027571Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)EnvironmentalOpen in IMG/M
3300027595Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepC_8hEnvironmentalOpen in IMG/M
3300027710Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)EnvironmentalOpen in IMG/M
3300027733Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027741Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027749Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027753Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027769Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027772Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300028027Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FCEnvironmentalOpen in IMG/M
3300028105Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300033992Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034068Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031EnvironmentalOpen in IMG/M
3300034093Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072EnvironmentalOpen in IMG/M
3300034166Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079EnvironmentalOpen in IMG/M
3300034356Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25926J51410_108661123300003490Freshwater LakeMKTXEIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTDELDTEDGIYNSGMTSEGLFL
JGI25924J51412_103554243300003491Freshwater LakeMKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTDELDTEEVYTIQDKHPKDCS*
Ga0007758_1107334913300004790Freshwater LakeMKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDTGIYNSGLTSEGLFLANELNETLNRLIKTYKWE
Ga0070374_1023902643300005517Freshwater LakeMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHNDELNTEDGIYNSGQSSEGLFLA
Ga0068876_1068494923300005527Freshwater LakeMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWESNRHKD
Ga0078894_1122026713300005662Freshwater LakeMKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRW
Ga0078894_1148386213300005662Freshwater LakeMKTPEQKVAEQLVNLTEDHWFNAASLARYITDQPYYTTDRIMELVAQIIRWGGRRHEDELTPSGVYESNSSSEGLFLAHELN
Ga0070744_1006016453300006484EstuarineMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRY
Ga0075473_10022769103300006875AqueousMSKTPEIKVAEQITNLSEDHWFNPAIMARYLIDQPFYTTDRIMELVAQIIKWGGRRHEDELTPSGIYESNTSSEGLFLANE
Ga0102873_111027613300007545EstuarineMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNSGLTSEGLFLANELNETLNRLIKTYKWENIKLPVDPDKII
Ga0102874_117268933300007546EstuarineMKTPEQKVAEQLVNLTEDHWFNAASLVSYITDQPYYTTDRIMELIA*
Ga0102879_124026423300007549EstuarineMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHTDELDTEDGIYNSGMTSEGLFLANELNQTLNKL
Ga0102820_103424313300007554EstuarineMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNSGLTSEGLFLANELNETLTKLIKTYKWENIKL
Ga0102920_104038173300007600EstuarineMKTPEQKVAEQLVNLTEDHWFNAASLARYITDQPYYTTDRIMELVAQIIKWGGRRHEDELTP
Ga0102923_117847813300007606EstuarineMKTPEQKVAEQLVNLTEDHWFNAASLARYITDQPYYTTDRIMELVAQIIKWGGRRH
Ga0102897_101925313300007617EstuarineMKTPEQKVAEQLVNLTEDHWFNAASLARYITDQPYYTTDRIMELVAQIIKWGGRRHEDEL
Ga0102863_114626033300007622EstuarineMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHTDELDTEDGIYNSGMTSEGLFLANELNQTLNKLIKTY
Ga0102869_118030813300007627EstuarineMKTPEQKVAEQLTNLTEDHWFNAASLARYLTDQPYYTTDRIMELVAQIIKWGGRRHEDELTPSGVYQSNSS
Ga0102902_108270913300007644EstuarineMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNSGLTSEGLFLANELNETLNRLIKT
Ga0102898_108438843300007658EstuarineMKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQAN
Ga0102910_101298213300007667EstuarineMSKTPEQKVAEQLTNLTEDHWFNAASLARYLTDQPYYTTDRIMELVAQIIKWGGRRHEDELTPS
Ga0102899_104054853300007706EstuarineMKTPEQKVAEQLVNLTEDHWFNAASLARYITDQPYYTTDRIMELVAQIIKWGGRRHEDELTPSGIYNSNTSS
Ga0114346_115624523300008113Freshwater, PlanktonMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHNDELNTEDGIYNSGQSSEGLFLANELNETLNRLIKT*
Ga0114346_125600923300008113Freshwater, PlanktonMKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTEEGIYNSGLTSEGLFLANELNQTLNKLIKKYK
Ga0114336_122832643300008261Freshwater, PlanktonMKTPEQKVAEQLVNLTEDHWFNAASLARYITDQPYYTTDRIMELIAQVIKWGGRRHEDELTPSGIYESNTSSEGL
Ga0102831_103928263300008996EstuarineMKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDTGIYNSGQTSEGLFLANELNETL
Ga0102816_116963933300008999EstuarineMKAQEIKVAEQLVNLTDDHWFNPAILARYLTDQPFYTVDRIMELVTQIIRWQSNRHNDELNTQD
Ga0102829_113093743300009026EstuarineMKTREIKVAEQLVNLTEDHWFNPAILARYLTDLPFYTVDRIMELVAQIIRWEANRYNDELTTES
Ga0102911_117114513300009049EstuarineMSKTPEQKVAEQLTNLTEDHWFNAASLARYLTDQPYYTTDRIMELVAQLIKWGGKRHEDELTPSGIYESNQSSE
Ga0102864_118508833300009051EstuarineMKTREIKVGEALVNLTEDHWFKPAILARYLTDQPFYTVDRIMELVAQIIRWEA
Ga0114973_1060436823300009068Freshwater LakeMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDTGIYNSGLTSEGLFLAN
Ga0102815_1080473023300009080EstuarineMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHTDELDTEDGIYNSGMTSEGLFLANELN
Ga0114980_1052537123300009152Freshwater LakeMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNSGLTSEGLFLANELNETLNRLIKTYKWENIKLPVDP
Ga0114963_1069047113300009154Freshwater LakeMKTREIKVAEALVNLTEDHWFNPASMARYLIDQPYYTADRVMELIAQVISWGGRRHEDELSEGGIYESG
Ga0114968_1076703413300009155Freshwater LakeMKTREIKVAEQLVNLTDDHWFNAAILARYLTDQPFHTVDRIMELVAQIIRWQANRHNDELNTE
Ga0114978_1059374513300009159Freshwater LakeMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYN
Ga0114978_1064936713300009159Freshwater LakeMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNSGLTSEGLFLANELNETLNRL
Ga0114978_1065828813300009159Freshwater LakeMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNSGLTSEGLFLANELNETLNRLIKTYKW
Ga0114966_1034512413300009161Freshwater LakeMSKTPEVKVAEQLVNLTEDHWFNAASLARYITDQPYYTTDRIMELVAQIIKWGGRRHEDELTPSGIYESNSSSEG
Ga0114975_1053654323300009164Freshwater LakeMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNSGLTSEGLFLANELNETLNRLIKTYKWENIKLPV
Ga0114979_1018526053300009180Freshwater LakeMKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTDELDTEDGIYNSGLTSEGLFLANELNKTLNRLIKT
Ga0114969_1039025343300009181Freshwater LakeMSKSNEIKLAEQLINLTEDHWFNPAIMARYMANQPYYTLDRLMELVSQVIKEVSLRHGN
Ga0114972_1013371363300009187Freshwater LakeMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELIAQTIRWQANRYTDELTTDTGIYNSGLTSEGLFLANELNE
Ga0114983_105425143300009194Deep SubsurfaceMKTREIKVAEDLVNLTEDHWCNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRY
Ga0114986_101794053300010374Deep SubsurfaceMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDSGIYDSGLTSEGLFLANELNK
Ga0157138_103531113300012352FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDS
Ga0163212_113664613300013087FreshwaterMSKTPEIKTAQDIANLAEDHWFNPAIMARYLIDQPYYTTDRIMELVAQLIKWGGRRHEDELTPSGIYESNTSSEGLFL
Ga0119952_110363933300014050FreshwaterMKTPEQKVAEQLTNLTEDHWFNAASLARYLTDQPYYTTDRIMELVAQIIKWGGKRHEDELTPSGIYESNQSSEGLF
Ga0181356_105367553300017761Freshwater LakeMKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTD
Ga0181343_111664113300017766Freshwater LakeMKTREIKVAEDLVNLTEDHWFNPAILARYLTGQPFFTVDRIMELVAQIIRWEANRYNDELTTEEGIYNSGLTSEGLFLANELNQTLNKLI
Ga0211736_1002777353300020151FreshwaterMKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDSGIYNSGLTSE
Ga0211736_1002988533300020151FreshwaterMKTREIKVAESLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDSGIYNSGLTSE
Ga0194129_1047585623300020578Freshwater LakeMSKTREIKTAQDIANLAEDHWFNPAIMARYLIDQPLYTTDRIMELVAQLI
Ga0194059_111113243300021600Anoxic Zone FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHNDELDTEDGIY
Ga0222712_1065479133300021963Estuarine WaterMSKSNEIKLAEQLINLTEDHWFNPAIMARYMANQPYYTLDRLMELVAQVIK
Ga0181354_111552313300022190Freshwater LakeMKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTDELDTEDGIYNSGL
Ga0214917_1009347513300022752FreshwaterMSKTPEIKTAQDIANLAEDHWFNPAIMARYLIDQPYYTTDRIMELVAQIIKWGGRRHEDELTPSGIYE
Ga0214917_1020646913300022752FreshwaterMSKTPEIKVAQQIANLSEDHWFNPAIMARYLIDQPYYTADRIMELVAQIIKWGGKRHEDELTPGGIYE
Ga0214921_1023304043300023174FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTDELDT
Ga0214921_1051838313300023174FreshwaterMKTKEIKVAEQITNLTEDHWFNPASMARYLIDQPYYTADRVMELIAQVISWGGRRHEDEL
Ga0244776_1088870013300024348EstuarineMSKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANR
Ga0255223_105578133300024480FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQ
Ga0256330_102324653300024481FreshwaterMSKTPEIKTAQDIANLAEDHWFNPAIMARYLIDQPYYTTDRIMELVAQIIKWGGRRHEDE
Ga0256318_111465123300024485FreshwaterMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHNDELNTEDGI
Ga0255245_103160013300025744FreshwaterMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHNDELN
Ga0256314_103741513300025749FreshwaterMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHNDELNTED
Ga0255250_114450113300025763FreshwaterMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHNDELNTEDGIYNS
Ga0255074_104566113300027121FreshwaterMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHTDEL
Ga0255090_103951513300027123FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQI
Ga0255071_106291613300027127FreshwaterMKTPEQKVAEQLTNLTEDHWFNAASLARYLTDQPYYTTDRIMELVAQIIKWGGRRHEDE
Ga0255115_100953813300027148FreshwaterMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHNDELNTEDGIYNSG
Ga0255078_105948213300027156FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNSGLTSEGLFLANELN
Ga0208800_103391623300027193EstuarineMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTDELDTEDGIYNSGLTSEGLFLANELNETLNRLIKTYKW
Ga0208554_105795913300027212EstuarineMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTDELDTEDGIYN
Ga0208928_103865743300027217EstuarineMSKTPEQKVAEQLTNLTEDHWFNAASLARYITDQPYYTTDRIMELVAQIIKWGGR
Ga0208929_101881463300027227EstuarineMKTPEQKVAEQLVNLTEDHWFNAASLARYITDQPYYTTDRIMELVAQIIKWGGRRHEDELTPSGIYNNNTSSEGLFL
Ga0208172_100850893300027231EstuarineMKTPEQKVAEQLVNLTEDHWFNAASLARYITDQPYYTTDRIMELVAQIIKWGGRRHEDELTPSG
Ga0208680_108703813300027253EstuarineMSKSNEIKLAEQLINLTEDHWFNPAIMARYMANQPYYTLDRLMELVAQVIKEVSLRHG
Ga0208027_105140543300027260EstuarineMKTPEQKVAEQLTNLTEDHWFNAASLARYLTDQPYYTTDRIMELVAQIIKWGGRRHEDELTPSGVYQSNS
Ga0208441_108242213300027294EstuarineMKTPEQKVAEQLTNLTEDHWFNAASLARYLTDQPYYTTDRIMELVAQIIKWGGRRHEDELTPSGVYQSNSSSEGLFL
Ga0208812_109906313300027311EstuarineMKTPEQKVAEQLTNLTEDHWFNAASLARYLTDQPYYTTDRIMELVAQIIKWGGRRHEDELTP
Ga0208923_101294113300027320EstuarineMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTDELDTEDGIYNSGLTSEGLFLANELNETLNRLIKTYKWENIKLP
Ga0207994_105495813300027416EstuarineMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTE
Ga0255086_102078013300027486FreshwaterMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTDELDTEDGIYN
Ga0255086_107406713300027486FreshwaterMKTPEQKVAEQLTNLTEDHWFNAASLARYLTDQPYYTTDRIMELVAQIIKWGGRRHEDELTPSGVYESNTSS
Ga0208437_109198533300027525EstuarineMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNSGLTSE
Ga0208897_105789033300027571EstuarineMKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDTGIYNSGQTSEGLFLANELNETLTKLIK
Ga0255122_100002213300027595FreshwaterMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHNDELNTEDGIYNSGQSSEGLFLANELNETLNRLIKTYKW
Ga0209599_1001786893300027710Deep SubsurfaceMKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYND
Ga0209297_131494313300027733Freshwater LakeMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIR
Ga0209087_103335013300027734Freshwater LakeMKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDTGIYDSGLTSEGLFLANELNQTLNRLIK
Ga0209085_124448333300027741Freshwater LakeMKTREIKVAEALVNLTEDHWFNPASMARYLIDQPYYTADRVMELIAQVISWGGRRHEDELSEGGIYES
Ga0209084_115714843300027749Freshwater LakeMKTREIKVAEALVNLTEDHWFNPAILARYLTDQPFYTVDRIMELIAQTIRWQANRYNDELDTEDGIYNSGLTSEGLFLANELNQTLNRLIKTYKWENIKL
Ga0208305_1017020133300027753EstuarineMSKTPEQKVAEQLTNLTEDHWFNAASLARYLTDQPYYTTDRIMELVAQLIRWGGKRHEDELTPGGIY
Ga0209088_1010768353300027763Freshwater LakeMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDTGIYNSGLTSEGLFLANE
Ga0209770_1009760913300027769Freshwater LakeMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDTGIYNSG
Ga0209768_1025490413300027772Freshwater LakeMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYTDELDTEDGIYNSGLTSEGLFLANELNQTLNKLIK
Ga0209500_1034314623300027782Freshwater LakeMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNSGLTSEGLFLANELNETLNRLI
Ga0209354_1032342413300027808Freshwater LakeMKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTESGIYNS
Ga0247722_10006926173300028027Deep Subsurface SedimentMKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTEEGIYNSGLTSEGLFLANELNQTLN
Ga0255254_105197613300028105FreshwaterMSKTKEIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDTGIYDSGLTSEGLFLANELN
Ga0315904_1077993313300031951FreshwaterMSKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRHN
Ga0315904_1113558923300031951FreshwaterMSKTREIKVAEDLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWQANRHNDELNTEDGIYNSGQSSEGL
Ga0334992_0456341_384_5603300033992FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDE
Ga0334995_0139274_1524_17693300034062FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTDSGIYDSGLTSEGLFLANEL
Ga0334990_0529660_459_6233300034068FreshwaterMSKTKEIKVAEDLVNLTEDHWFNAAILARYLTDQPFYTVDRIMELVAQIIRWQAN
Ga0335012_0404449_510_6653300034093FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWE
Ga0335016_0121162_1_1863300034166FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTT
Ga0335048_0339957_1_2343300034356FreshwaterMKTREIKVAEQLVNLTEDHWFNPAILARYLTDQPFYTVDRIMELVAQIIRWEANRYNDELTTEEGIYNSGLTSEGLFL


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