Metagenome Family F088865

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088865
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	47 residues
Representative Sequence	MSKTYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWKKRKAA
Number of Associated Samples	71
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	32.11 %
% of genes from short scaffolds (< 2000 bps)	82.57 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.376 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (74.312 % of family members)
Environment Ontology (ENVO)	Unclassified (96.330 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.578 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.79% β-sheet: 0.00% Coil/Unstructured: 59.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01726	LexA_DNA_bind	10.09
PF01381	HTH_3	1.83
PF00589	Phage_integrase	1.83
PF13730	HTH_36	0.92
PF00959	Phage_lysozyme	0.92
PF13443	HTH_26	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
All Organisms	root	All Organisms	48.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
cellular organisms	root	All Organisms → cellular organisms	44.04 %
Viruses	superkingdom	All Organisms → Viruses	4.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.04 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.67 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	42.20 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.67 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	42.20 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.67 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.92 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	42.20 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.67 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	42.20 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	3.67 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.92 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	42.20 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	3.67 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.92 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	42.20 %
Votkovvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Votkovvirus	3.67 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.92 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	42.20 %
Votkovvirus S28C10	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Votkovvirus → Votkovvirus S28C10	3.67 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.92 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	42.20 %
Votkovvirus S28C10	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Votkovvirus → Votkovvirus S28C10	3.67 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.92 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005398\|Ga0066858_10016142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2245	Open in IMG/M
3300005398\|Ga0066858_10194243	Not Available	584	Open in IMG/M
3300005408\|Ga0066848_10028589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1570	Open in IMG/M
3300005408\|Ga0066848_10059270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1053	Open in IMG/M
3300005428\|Ga0066863_10239269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	637	Open in IMG/M
3300005514\|Ga0066866_10208528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	684	Open in IMG/M
3300005514\|Ga0066866_10275707	Not Available	578	Open in IMG/M
3300005551\|Ga0066843_10200489	Not Available	561	Open in IMG/M
3300006565\|Ga0100228_1033724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	5896	Open in IMG/M
3300006736\|Ga0098033_1123416	Not Available	731	Open in IMG/M
3300006738\|Ga0098035_1029259	Not Available	2100	Open in IMG/M
3300006738\|Ga0098035_1097147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1028	Open in IMG/M
3300006738\|Ga0098035_1163589	Not Available	753	Open in IMG/M
3300006750\|Ga0098058_1034754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1453	Open in IMG/M
3300006751\|Ga0098040_1030950	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Votkovvirus → Votkovvirus S28C10	1708	Open in IMG/M
3300006751\|Ga0098040_1036675	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1553	Open in IMG/M
3300006751\|Ga0098040_1096863	Not Available	890	Open in IMG/M
3300006751\|Ga0098040_1147393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	697	Open in IMG/M
3300006751\|Ga0098040_1152350	Not Available	684	Open in IMG/M
3300006751\|Ga0098040_1212778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	563	Open in IMG/M
3300006752\|Ga0098048_1075301	Not Available	1036	Open in IMG/M
3300006753\|Ga0098039_1272652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	567	Open in IMG/M
3300006753\|Ga0098039_1332636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	505	Open in IMG/M
3300006754\|Ga0098044_1031208	All Organisms → cellular organisms → Bacteria	2339	Open in IMG/M
3300006754\|Ga0098044_1065226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1529	Open in IMG/M
3300006754\|Ga0098044_1213923	Not Available	755	Open in IMG/M
3300006754\|Ga0098044_1357730	Not Available	553	Open in IMG/M
3300006789\|Ga0098054_1044849	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Votkovvirus → Votkovvirus S28C10	1705	Open in IMG/M
3300006789\|Ga0098054_1071309	Not Available	1315	Open in IMG/M
3300006789\|Ga0098054_1095110	Not Available	1117	Open in IMG/M
3300006789\|Ga0098054_1212208	Not Available	704	Open in IMG/M
3300006793\|Ga0098055_1267788	Not Available	641	Open in IMG/M
3300006921\|Ga0098060_1006359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	4056	Open in IMG/M
3300006922\|Ga0098045_1166098	Not Available	502	Open in IMG/M
3300006924\|Ga0098051_1094348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	805	Open in IMG/M
3300006925\|Ga0098050_1086979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	803	Open in IMG/M
3300006925\|Ga0098050_1135656	Not Available	622	Open in IMG/M
3300006927\|Ga0098034_1225489	Not Available	520	Open in IMG/M
3300006928\|Ga0098041_1116594	Not Available	862	Open in IMG/M
3300006928\|Ga0098041_1285101	Not Available	525	Open in IMG/M
3300006929\|Ga0098036_1036428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1539	Open in IMG/M
3300006929\|Ga0098036_1080743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1002	Open in IMG/M
3300006929\|Ga0098036_1145156	Not Available	726	Open in IMG/M
3300006929\|Ga0098036_1278187	Not Available	505	Open in IMG/M
3300007508\|Ga0105011_1015696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	4657	Open in IMG/M
3300007513\|Ga0105019_1013321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	6320	Open in IMG/M
3300008050\|Ga0098052_1189498	Not Available	802	Open in IMG/M
3300008217\|Ga0114899_1168278	Not Available	706	Open in IMG/M
3300008954\|Ga0115650_1260162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	989	Open in IMG/M
3300009370\|Ga0118716_1030094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	3753	Open in IMG/M
3300009603\|Ga0114911_1106834	Not Available	812	Open in IMG/M
3300009604\|Ga0114901_1006202	Not Available	5532	Open in IMG/M
3300009620\|Ga0114912_1102973	Not Available	684	Open in IMG/M
3300010149\|Ga0098049_1014484	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2638	Open in IMG/M
3300010149\|Ga0098049_1046418	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1391	Open in IMG/M
3300010150\|Ga0098056_1130593	Not Available	852	Open in IMG/M
3300010151\|Ga0098061_1011534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	3791	Open in IMG/M
3300010151\|Ga0098061_1033629	Not Available	2049	Open in IMG/M
3300010151\|Ga0098061_1097483	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Votkovvirus → Votkovvirus S28C10	1097	Open in IMG/M
3300010151\|Ga0098061_1312636	Not Available	539	Open in IMG/M
3300010153\|Ga0098059_1129460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	998	Open in IMG/M
3300010153\|Ga0098059_1370185	Not Available	543	Open in IMG/M
3300010153\|Ga0098059_1371120	Not Available	542	Open in IMG/M
3300010153\|Ga0098059_1423417	Not Available	502	Open in IMG/M
3300017703\|Ga0181367_1055472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	695	Open in IMG/M
3300017715\|Ga0181370_1019236	Not Available	892	Open in IMG/M
3300017728\|Ga0181419_1029652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1495	Open in IMG/M
3300020262\|Ga0211537_1049009	Not Available	778	Open in IMG/M
3300020262\|Ga0211537_1081840	Not Available	559	Open in IMG/M
3300020435\|Ga0211639_10095353	Not Available	1261	Open in IMG/M
3300020470\|Ga0211543_10480143	Not Available	592	Open in IMG/M
3300021442\|Ga0206685_10016749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2302	Open in IMG/M
3300021443\|Ga0206681_10002499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	7789	Open in IMG/M
3300022225\|Ga0187833_10075861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2225	Open in IMG/M
3300022225\|Ga0187833_10407631	Not Available	721	Open in IMG/M
3300022227\|Ga0187827_10197214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1371	Open in IMG/M
3300025038\|Ga0208670_119522	Not Available	672	Open in IMG/M
3300025052\|Ga0207906_1033788	Not Available	701	Open in IMG/M
3300025066\|Ga0208012_1021863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1030	Open in IMG/M
3300025066\|Ga0208012_1041152	Not Available	691	Open in IMG/M
3300025066\|Ga0208012_1043112	Not Available	672	Open in IMG/M
3300025078\|Ga0208668_1017086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1501	Open in IMG/M
3300025078\|Ga0208668_1020504	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1344	Open in IMG/M
3300025085\|Ga0208792_1060872	Not Available	695	Open in IMG/M
3300025096\|Ga0208011_1011808	Not Available	2399	Open in IMG/M
3300025096\|Ga0208011_1035178	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Votkovvirus → Votkovvirus S28C10	1211	Open in IMG/M
3300025097\|Ga0208010_1127155	Not Available	509	Open in IMG/M
3300025098\|Ga0208434_1078650	Not Available	674	Open in IMG/M
3300025103\|Ga0208013_1015930	Not Available	2292	Open in IMG/M
3300025118\|Ga0208790_1037124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1583	Open in IMG/M
3300025125\|Ga0209644_1012110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1809	Open in IMG/M
3300025128\|Ga0208919_1157489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	700	Open in IMG/M
3300025131\|Ga0209128_1075012	Not Available	1151	Open in IMG/M
3300025131\|Ga0209128_1193610	Not Available	578	Open in IMG/M
3300025133\|Ga0208299_1084341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1107	Open in IMG/M
3300025141\|Ga0209756_1029594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2966	Open in IMG/M
3300025141\|Ga0209756_1052892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1972	Open in IMG/M
3300025141\|Ga0209756_1278420	Not Available	600	Open in IMG/M
3300025274\|Ga0208183_1105229	Not Available	513	Open in IMG/M
3300025277\|Ga0208180_1018228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2149	Open in IMG/M
3300025873\|Ga0209757_10094383	Not Available	912	Open in IMG/M
3300026268\|Ga0208641_1183006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	554	Open in IMG/M
3300031811\|Ga0310125_10373761	Not Available	696	Open in IMG/M
3300032006\|Ga0310344_10238634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1550	Open in IMG/M
3300032032\|Ga0315327_10375227	Not Available	891	Open in IMG/M
3300032130\|Ga0315333_10553873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	538	Open in IMG/M
3300032278\|Ga0310345_11672446	Not Available	622	Open in IMG/M
3300034654\|Ga0326741_023464	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1089	Open in IMG/M
3300034695\|Ga0372840_061469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1108	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	87.16%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.59%
Coastal	Environmental → Aquatic → Marine → Coastal	3.67%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.67%
Strait	Environmental → Aquatic → Marine → Strait	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	86.24%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.67%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.92%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	74.31%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	5.50%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	5.50%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.67%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.67%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.92%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.92%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	0.92%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental	Open in IMG/M
3300005428	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300005551	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007508	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007513	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008954	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um	Environmental	Open in IMG/M
3300009370	Combined Assembly of Gp0127930, Gp0127931	Environmental	Open in IMG/M
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017715	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaG	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300020262	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556100-ERR599172)	Environmental	Open in IMG/M
3300020435	Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025038	Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl (SPAdes)	Environmental	Open in IMG/M
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025274	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental	Open in IMG/M
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066858_100161422	3300005398	Marine	MSKNYKRYEFKTFQALEKFFIKKILPQKNVSTKVIGKVLLVWKRKKAA*
Ga0066858_101942431	3300005398	Marine	MRKYKRYEFKTFQGLEKFFVKKILPQKNISTKVIGKVLFVWKKRKAA*
Ga0066848_100285893	3300005408	Marine	MSKNYKRYEFKTFQDLEKFFLKKILPKKNIHSKVIGKVLLVWKRKKAA*
Ga0066848_100592703	3300005408	Marine	MSKNYKRYEFKTFQALEKFFINKILPQKNIQTKVIGKVLLVWKRKKAA*
Ga0066863_102392691	3300005428	Marine	MSKTYKRYEFKTFQDLEKFFVKKILPQKNISTKVIGKVLFVWKKQKRKKAA*
Ga0066866_102085282	3300005514	Marine	MFKKYKRYEFKTFQALEKFFTNKILPQKNISSKVIGKVLLVWNRKKAA*
Ga0066866_102757072	3300005514	Marine	MEKTYKRYEFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKKRKAA*
Ga0066843_102004892	3300005551	Marine	MSKTYKRYEFKTFQDLEKFFLKKILPKKNIHSKVIGKVLLVWKRKKAA*
Ga0100228_103372410	3300006565	Marine	MSKNYKRYEFKTFQALEKFFINKILPQKNISSKVIGKVLFVWKKRKAA*
Ga0098033_11234163	3300006736	Marine	MRKYKRYEFKTFQDLEKFFVKKILPQKNISTKVIGKVLFVWKKRKAA*
Ga0098035_10292599	3300006738	Marine	MSKNYKRYEFKTFQDLEKFFVKKILPQKNISTKVIGKVLFVWKKRKAA*
Ga0098035_10971473	3300006738	Marine	MLNNYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWKRKAA*
Ga0098035_11635892	3300006738	Marine	MTRTFKRYEFKTFQDLEKFFVNKILPQKNTSSKVIGKVLLVWKKQKRKKAA*
Ga0098058_10347545	3300006750	Marine	MEKTYKRYEFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVW
Ga0098040_10309501	3300006751	Marine	MEKTYKRYEFKTFQALEKFFVNKILPQKNISTKVIGKVLFVWKKRKAA*
Ga0098040_10366751	3300006751	Marine	YMEKTYKRYEFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKKRKAA*
Ga0098040_10968631	3300006751	Marine	MEKTYKRYEFKTFQDLEKFFVEKILPQKNISSKVIGKVLFVWKKRKAA*
Ga0098040_11473931	3300006751	Marine	MLNNYKRYEFKTFQDLEKFFTNKILPQKNISSKVIGKVLLVWKKRKAA*
Ga0098040_11523501	3300006751	Marine	RYEFKTFQALEKFFVNKILPQKNTSSKVIGKVLLVWKKQKRKKAA*
Ga0098040_12127783	3300006751	Marine	MFKKYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKRKAA*
Ga0098048_10753014	3300006752	Marine	NNMTRTFKRYEFKTFQALEKFFVNKILPQKNTSSKVIGKVLLVWKKQKRKKDA*
Ga0098039_12726521	3300006753	Marine	MSKTYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKRKAA*
Ga0098039_13326361	3300006753	Marine	MSKNYKRYEFKTFQDLEKFFVKKILPQKNISTKVIGKVLFVWKKQKRKKAA*
Ga0098044_10312081	3300006754	Marine	MEKTYKRYEFKTFQALEKFFINKILPQKNISTKVIGKVLFVWKKRKAA*
Ga0098044_10652266	3300006754	Marine	KTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKKRKAA*
Ga0098044_12139231	3300006754	Marine	FQDLEKFFVNKILPQKNTSSKVIGKVLLVWKKQKRKKAA*
Ga0098044_13577301	3300006754	Marine	MSKNYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKKAA*
Ga0098054_10448491	3300006789	Marine	MEKTYKRYEFKTFQDLEKFFVEKILPQKNIHSKVIGKVLLVWNRKRKAA*
Ga0098054_10713091	3300006789	Marine	TYKRYEFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKRRKAA*
Ga0098054_10951101	3300006789	Marine	MEKTYKRYEFKTFQDLEKFFVNKILPQKNISSKVIGKVLFVWKKRKAA*
Ga0098054_12122082	3300006789	Marine	MQTNFKTYRFKTYQDLEKYFLNKILPQKNISSKVIGKTLFVWKK
Ga0098055_12677883	3300006793	Marine	MEKTYKRYEFKTFQALEKFFINKILPQKNISSKVIGKVLFVWKKRKAA*
Ga0098060_100635910	3300006921	Marine	MEKTYKRYEFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWNRKRKAA*
Ga0098045_11660982	3300006922	Marine	MEKTYKRYEFKTFQDLEKFFVEKILPQKNIHSKVIGKV
Ga0098051_10943482	3300006924	Marine	MEKTYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWKRKAA*
Ga0098050_10869793	3300006925	Marine	MEKTYKRYKFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVW
Ga0098050_11356561	3300006925	Marine	YKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKRKAA*
Ga0098034_12254892	3300006927	Marine	MLNNYKRYEIKTFQDLEKFFTNKILPQKNISSKVIGKVLFVWKKRKAA*
Ga0098041_11165945	3300006928	Marine	FKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKKRKAA*
Ga0098041_12851011	3300006928	Marine	MFKKYKRYEFKTFQALEKFFINKILPQKNISTKVIGKVLFVWKKRKAA*
Ga0098036_10364283	3300006929	Marine	MSKTYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWKRKAA*
Ga0098036_10807433	3300006929	Marine	MEKTYKRYEFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKKRKRAA*
Ga0098036_11451561	3300006929	Marine	TYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKRKAA*
Ga0098036_12781871	3300006929	Marine	MEKTYKRKEFKTFQDLEKFFIKKILPQKNISTKVIGKVLLVWKKRKAA*
Ga0105011_101569612	3300007508	Marine	MTRTFKRYEFKTFQALEKFFVNKILPQKNISTKVIGKVLLVWKKRKAA*
Ga0105019_10133216	3300007513	Marine	MTRTFKRYEFKTFQALEKFFVNKILPQKNISSKVIGKVLLVWKKRKAA*
Ga0098052_11894982	3300008050	Marine	MSKTYKRYEFKTFQALETFFINKILPQKNIHSKVIGKVLLVWNRKKAA*
Ga0114899_11682782	3300008217	Deep Ocean	MSKNYKRYEFKTFQALEKFFINKILPQKNISTKVIGKVLLVWKKRKAA*
Ga0115650_12601624	3300008954	Marine	YEFKTFQALEKFFVNKILPQKNISSKVIGKVLLVWKKRKAA*
Ga0118716_103009411	3300009370	Marine	GNNPYINNMTRTFKRYEFKTFQALEKFFVNKILPQKNISTKVIGKVLLVWKKRKAA*
Ga0114911_11068341	3300009603	Deep Ocean	MSKNYKRYEFKTFQALEKFFINKILPQKNISTKVIGKVLLVWKRKKAA*
Ga0114901_100620215	3300009604	Deep Ocean	FETSNKYKDTSQSTGSGLKKNFKTYRFKTYQKLEKFFLNKILPQKNISSKVIGKTLFVWKKQRKAA*
Ga0114912_11029731	3300009620	Deep Ocean	QSTGSGLKKNFKTYRFKTYQKLEKFFLNKILPQKNISSKVIGKTLFVWKKQRKAA*
Ga0098049_10144848	3300010149	Marine	MKKTYKRYKFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKKRKAA*
Ga0098049_10464181	3300010149	Marine	KTYKRYKFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKKRKAA*
Ga0098056_11305933	3300010150	Marine	MEKTYKRYEFKTFQALEKFFVNKILPQKNTSSKVIGKVLLVWKKQKRKKAA*
Ga0098061_10115341	3300010151	Marine	MTRTFKRYEFKTFQDLEKFFVNKILPQKNTSSKVIGKVLLVWKKQKRKKA
Ga0098061_10336291	3300010151	Marine	MKKTYKRYKFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKRRKAA*
Ga0098061_10974831	3300010151	Marine	KTFQDLEKFFVNKILPQKNTSSKVIGKVLLVWKKQKRKKAA*
Ga0098061_13126361	3300010151	Marine	MTRTFKRYEFKTFQDLEKFFVNKILPQKNTSSKVIG
Ga0098059_11294601	3300010153	Marine	MFKKYKRYEFKTFQALEKFFTNKILPQKNISSKVIGKVLLVWKKRKAA*
Ga0098059_13701852	3300010153	Marine	MTRTFKRYEFKTFQALEKFFVNKILPQKNISTKVIGKVLFVWKKRKAA*
Ga0098059_13711201	3300010153	Marine	KTYKRYKFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKRRKAA*
Ga0098059_14234171	3300010153	Marine	EFKTFQDLEKFFVEKILPQKNIHSKVIGKVLLVWNRKRKAA*
Ga0181367_10554721	3300017703	Marine	MSKNYKRYEFKTFQDLEKFFTNKILPQKNISSKVIGKVLLVWKRKKAA
Ga0181370_10192363	3300017715	Marine	MSKNYKRYEFKTFQALEKFFINKILPQKNIQTKIIGKVLFVWKKRKAA
Ga0181419_10296524	3300017728	Seawater	MQKTYKRYKFKTFQALEKFFINKIFPQKNIHSKVIGKVLLVWNRKRKAA
Ga0211537_10490091	3300020262	Marine	MSKNYKRYEFKTFQDLEKFFVKKILPQKNISTKVIGKVLFVWKKRKAA
Ga0211537_10818401	3300020262	Marine	MSKNYKRYEFKTFQDLEKFFLKKILPKKNIHSKVIGKVLLVWKRKKAA
Ga0211639_100953534	3300020435	Marine	MSKTYKRYEFKTFQDLEKFFLKKILPKKNIHSKVIGKVLLVWKRKAA
Ga0211543_104801432	3300020470	Marine	MFKKYKRYEFKTFQALEKFFINKILPQKNISTKVIGKVLLVWKKRKAA
Ga0206685_100167496	3300021442	Seawater	MSKNYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKKAA
Ga0206681_1000249915	3300021443	Seawater	MSKNYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKRKKAA
Ga0187833_100758616	3300022225	Seawater	MSKNYKRYEFKTFQALEKFFINKILPQKNIQTKVIGKVLLVWKRKKAA
Ga0187833_104076311	3300022225	Seawater	MSKNYKRYEFKTFQDLEKFFLKKILPKKNIHSKVIGKVLLVWKRKAA
Ga0187827_101972142	3300022227	Seawater	MSKNYKRYEFKTFQALEKFFINKILPQKNVSTKVIGKVLLVWKRKKAA
Ga0208670_1195221	3300025038	Marine	MTRTFKRYEFKTFQALEKFFVNKILPQKNISTKVIGKVL
Ga0207906_10337882	3300025052	Marine	MSKNYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLFVWNRKKAA
Ga0208012_10218632	3300025066	Marine	MEKTYKRYEFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKKRKAA
Ga0208012_10411523	3300025066	Marine	MFKKYKRYEFKTFQALEKFFTNKILPQKNISSKVIGKVLLVWKKRKAA
Ga0208012_10431122	3300025066	Marine	MEKTYKRYEFKTFQDLEKFFVNKILPQKNISSKVIGKVLFVWKKRKAA
Ga0208668_10170863	3300025078	Marine	MRKYKRYEFKTFQDLEKFFVKKILPQKNISTKVIGKVLFVWKKRKAA
Ga0208668_10205041	3300025078	Marine	MSKNYKRYEFKTFQALEKFFINKILPQKNIQTKIIGKVLLVWKRKKAA
Ga0208792_10608723	3300025085	Marine	MLNNYKRYEFKTFQDLEKFFTNKILPQKNISSKVIGKVLLVWKKRKAA
Ga0208011_10118081	3300025096	Marine	MKKTYKRYKFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKRRKAA
Ga0208011_10351781	3300025096	Marine	YKRYEFKTFQALEKFFVNKILPQKNISTKVIGKVLFVWKKRKAA
Ga0208010_11271551	3300025097	Marine	MSKNYKRYEFKTFQDLEKFFVKKILPQKNISTKVIGKVLFVWK
Ga0208434_10786502	3300025098	Marine	MEKTYKRYEFKTFQDLEKFFIKKILPQKNIHSKVIGKVLL
Ga0208013_10159301	3300025103	Marine	MEKTYKRYEFKTFQDLEKFFVEKILPQKNISSKVIGKVLFVWKKRKAA
Ga0208790_10371246	3300025118	Marine	FKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKKRKAA
Ga0209644_10121101	3300025125	Marine	MSKNYKRYEFKTFQDLETFFIKKILPQKNIHSKVIGKVLLVWNRKRKAA
Ga0208919_11574892	3300025128	Marine	MSKTYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWKRKAA
Ga0209128_10750123	3300025131	Marine	YKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKRKAA
Ga0209128_11936102	3300025131	Marine	MSKTYKRYEFKTFQDLEKFFVKKILPQKNISTKVIGKVLFVWKKRKAA
Ga0208299_10843412	3300025133	Marine	MSKTYKRYEFKTFQALETFFINKILPQKNIHSKVIGKVLLVWNRKKAA
Ga0209756_10295942	3300025141	Marine	MFKKYKRYEFKTFQALEKFFTNKILPQKNISSKVIGKVLLVWNRKKAA
Ga0209756_10528923	3300025141	Marine	MSKTYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKRKAA
Ga0209756_12784203	3300025141	Marine	MEKTYKRYKFKTFQDLEKFFIKKILPQKNIHSKVIGKVLLVWKRRKAA
Ga0208183_11052291	3300025274	Deep Ocean	TGSGLKKNFKTYRFKTYQKLEKFFLNKILPQKNISSKVIGKTLFVWKKQRKAA
Ga0208180_10182282	3300025277	Deep Ocean	MSKNYKRYEFKTFQALEKFFINKILPQKNISTKVIGKVLLVWKKRKAA
Ga0209757_100943833	3300025873	Marine	MSKNYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKRKAA
Ga0208641_11830063	3300026268	Marine	KTYKRYEFKTFQDLEKFFVKKILPQKNISTKVIGKVLFVWKKQKRKKAA
Ga0310125_103737612	3300031811	Marine	MNKSYKRYEFKTFQDLETFFINKILPQKNIHSKVIGKVLLVWNRKRKKAA
Ga0310344_102386344	3300032006	Seawater	MNKSYKRYEFKTFQGLEKFFIKKILPQKNISTKVIGKVLLVWKKKKGKAA
Ga0315327_103752272	3300032032	Seawater	MSKTYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWKKRKAA
Ga0315333_105538731	3300032130	Seawater	FKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKRKAA
Ga0310345_116724461	3300032278	Seawater	MSKNYKRYEFKTFQALEKFFINKILPQKNIHSKVIGKVLLVWNRKRKRAA
Ga0326741_023464_245_388	3300034654	Filtered Seawater	MKKYKRYEFKTFQDLEKFFITTILPKKNIHSKVIGKVLLVWKRKKAA
Ga0372840_061469_962_1108	3300034695	Seawater	MNKSYKRYEFKTFQDLETFFIKKILPQKNIHSKVIGKVLLVWNRKKAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088865

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences