NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F088812

Metagenome Family F088812

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088812
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 52 residues
Representative Sequence RQRMIADGYDVPWLYLEPVGKNRTLVVRMRDESEVRAARAAYLAKGKK
Number of Associated Samples 50
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 94.50 %
% of genes from short scaffolds (< 2000 bps) 93.58 %
Associated GOLD sequencing projects 29
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (70.642 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(87.156 % of family members)
Environment Ontology (ENVO) Unclassified
(98.165 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(88.991 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 19.74%    β-sheet: 18.42%    Coil/Unstructured: 61.84%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF07087DUF1353 14.68
PF05887Trypan_PARP 0.92
PF05119Terminase_4 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG3747Phage terminase, small subunitMobilome: prophages, transposons [X] 0.92


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A70.64 %
All OrganismsrootAll Organisms29.36 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006025|Ga0075474_10247752Not Available536Open in IMG/M
3300006026|Ga0075478_10047866Not Available1403Open in IMG/M
3300006026|Ga0075478_10098056All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300006027|Ga0075462_10047324Not Available1369Open in IMG/M
3300006027|Ga0075462_10076535All Organisms → Viruses → Predicted Viral1050Open in IMG/M
3300006637|Ga0075461_10073592Not Available1089Open in IMG/M
3300006637|Ga0075461_10170062Not Available661Open in IMG/M
3300006637|Ga0075461_10178192Not Available642Open in IMG/M
3300006637|Ga0075461_10215958Not Available570Open in IMG/M
3300006802|Ga0070749_10181154Not Available1213Open in IMG/M
3300006810|Ga0070754_10093986All Organisms → Viruses → Predicted Viral1491Open in IMG/M
3300006810|Ga0070754_10108272Not Available1365Open in IMG/M
3300006810|Ga0070754_10513871All Organisms → cellular organisms → Bacteria → Proteobacteria514Open in IMG/M
3300006810|Ga0070754_10517298All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2512Open in IMG/M
3300006867|Ga0075476_10186999Not Available759Open in IMG/M
3300006867|Ga0075476_10197653Not Available734Open in IMG/M
3300006869|Ga0075477_10113749Not Available1150Open in IMG/M
3300006869|Ga0075477_10436026All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2506Open in IMG/M
3300006874|Ga0075475_10097035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1333Open in IMG/M
3300006916|Ga0070750_10453072Not Available530Open in IMG/M
3300006916|Ga0070750_10473144Not Available516Open in IMG/M
3300006919|Ga0070746_10284314Not Available763Open in IMG/M
3300006919|Ga0070746_10359656All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2658Open in IMG/M
3300007234|Ga0075460_10244631Not Available599Open in IMG/M
3300007234|Ga0075460_10253867All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2585Open in IMG/M
3300007236|Ga0075463_10080467All Organisms → Viruses → Predicted Viral1051Open in IMG/M
3300007236|Ga0075463_10255125Not Available564Open in IMG/M
3300007344|Ga0070745_1202282Not Available733Open in IMG/M
3300007344|Ga0070745_1263618All Organisms → cellular organisms → Bacteria → Proteobacteria620Open in IMG/M
3300007344|Ga0070745_1290272Not Available584Open in IMG/M
3300007344|Ga0070745_1359659Not Available509Open in IMG/M
3300007345|Ga0070752_1160828Not Available917Open in IMG/M
3300007345|Ga0070752_1388187Not Available518Open in IMG/M
3300007346|Ga0070753_1074973Not Available1348Open in IMG/M
3300007346|Ga0070753_1290880All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2585Open in IMG/M
3300007539|Ga0099849_1197586All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2758Open in IMG/M
3300007640|Ga0070751_1055569Not Available1722Open in IMG/M
3300007640|Ga0070751_1089744Not Available1282Open in IMG/M
3300007640|Ga0070751_1109307Not Available1136Open in IMG/M
3300007640|Ga0070751_1147388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium943Open in IMG/M
3300007640|Ga0070751_1275646Not Available632Open in IMG/M
3300007640|Ga0070751_1374506Not Available517Open in IMG/M
3300007960|Ga0099850_1175159All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2854Open in IMG/M
3300007960|Ga0099850_1324491Not Available580Open in IMG/M
3300008012|Ga0075480_10511102Not Available577Open in IMG/M
3300010296|Ga0129348_1234902Not Available618Open in IMG/M
3300010297|Ga0129345_1157724Not Available818Open in IMG/M
3300010297|Ga0129345_1269236Not Available593Open in IMG/M
3300010299|Ga0129342_1019289All Organisms → Viruses → Predicted Viral2798Open in IMG/M
3300010299|Ga0129342_1108582Not Available1035Open in IMG/M
3300010299|Ga0129342_1174000Not Available775Open in IMG/M
3300010300|Ga0129351_1048536All Organisms → Viruses → Predicted Viral1739Open in IMG/M
3300010300|Ga0129351_1152577Not Available911Open in IMG/M
3300010300|Ga0129351_1209867Not Available754Open in IMG/M
3300010318|Ga0136656_1049569Not Available1512Open in IMG/M
3300010318|Ga0136656_1134298Not Available853Open in IMG/M
3300010368|Ga0129324_10366924Not Available559Open in IMG/M
3300019730|Ga0194001_1068157Not Available511Open in IMG/M
3300021356|Ga0213858_10412517Not Available633Open in IMG/M
3300022057|Ga0212025_1053683Not Available696Open in IMG/M
3300022068|Ga0212021_1038659Not Available949Open in IMG/M
3300022068|Ga0212021_1134710Not Available505Open in IMG/M
3300022069|Ga0212026_1012068All Organisms → Viruses → Predicted Viral1137Open in IMG/M
3300022069|Ga0212026_1025228Not Available855Open in IMG/M
3300022071|Ga0212028_1014722All Organisms → cellular organisms → Bacteria → Proteobacteria1308Open in IMG/M
3300022071|Ga0212028_1027503All Organisms → Viruses → Predicted Viral1024Open in IMG/M
3300022158|Ga0196897_1018141All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2863Open in IMG/M
3300022159|Ga0196893_1022422Not Available585Open in IMG/M
3300022183|Ga0196891_1056618Not Available707Open in IMG/M
3300022183|Ga0196891_1065025Not Available653Open in IMG/M
3300022187|Ga0196899_1100909Not Available855Open in IMG/M
3300025610|Ga0208149_1042833All Organisms → cellular organisms → Bacteria → Proteobacteria1195Open in IMG/M
3300025610|Ga0208149_1100123Not Available696Open in IMG/M
3300025630|Ga0208004_1108424Not Available649Open in IMG/M
3300025671|Ga0208898_1031442All Organisms → Viruses → Predicted Viral2157Open in IMG/M
3300025671|Ga0208898_1059364Not Available1335Open in IMG/M
3300025671|Ga0208898_1081253Not Available1041Open in IMG/M
3300025751|Ga0208150_1110741Not Available891Open in IMG/M
3300025759|Ga0208899_1090149Not Available1170Open in IMG/M
3300025759|Ga0208899_1128241Not Available900Open in IMG/M
3300025759|Ga0208899_1159179Not Available762Open in IMG/M
3300025759|Ga0208899_1188286All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2667Open in IMG/M
3300025769|Ga0208767_1182502Not Available725Open in IMG/M
3300025771|Ga0208427_1069102Not Available1265Open in IMG/M
3300025771|Ga0208427_1173279Not Available700Open in IMG/M
3300025771|Ga0208427_1271595All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2515Open in IMG/M
3300025803|Ga0208425_1030005All Organisms → Viruses → Predicted Viral1412Open in IMG/M
3300025803|Ga0208425_1065127Not Available889Open in IMG/M
3300025810|Ga0208543_1059693Not Available933Open in IMG/M
3300025840|Ga0208917_1077132Not Available1259Open in IMG/M
3300025840|Ga0208917_1131713Not Available885Open in IMG/M
3300025889|Ga0208644_1107763Not Available1356Open in IMG/M
3300025889|Ga0208644_1205247All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2852Open in IMG/M
3300025889|Ga0208644_1352903Not Available560Open in IMG/M
3300034374|Ga0348335_034607All Organisms → Viruses → Predicted Viral2159Open in IMG/M
3300034374|Ga0348335_071608All Organisms → Viruses → Predicted Viral1210Open in IMG/M
3300034374|Ga0348335_086123Not Available1040Open in IMG/M
3300034374|Ga0348335_169012Not Available572Open in IMG/M
3300034374|Ga0348335_184019All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2526Open in IMG/M
3300034375|Ga0348336_104635Not Available949Open in IMG/M
3300034375|Ga0348336_187921Not Available566Open in IMG/M
3300034418|Ga0348337_061083Not Available1434Open in IMG/M
3300034418|Ga0348337_079080All Organisms → Viruses → Predicted Viral1157Open in IMG/M
3300034418|Ga0348337_102614Not Available927Open in IMG/M
3300034418|Ga0348337_152251All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 1.185.O._10N.286.49.C2651Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous87.16%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient11.01%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.92%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300019730Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_7-8_MGEnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022069Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022159Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v3)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0075474_1024775223300006025AqueousADGYDVPWLYLEPVGENRTLVVRMRDESQVKAARAAFLAKGKEWAST*
Ga0075478_1004786613300006026AqueousWVRHYRQEMIADGYDVPWLYLEPKGKGRTLVVRMRDEPEVKAARAAFLARGVK*
Ga0075478_1009805633300006026AqueousRSAWERSYRKRKIADGYDVPWLYLEPIGKSRTLVVRMCDESEVRAARAAFLARGKR*
Ga0075462_1004732413300006027AqueousAWERSYRKRKIADGYDVPWLYLEPVGKSRTLVVRMRDESEMRAARAAYLAKGKK*
Ga0075462_1007653533300006027AqueousVHQKKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK*
Ga0075461_1007359243300006637AqueousIADGYDVPWLYLEPVGKNRTLVVRMRDESEVKAARAAFLARGVK*
Ga0075461_1017006233300006637AqueousHYRQQMIADGYAVPWLYLEPVGESRTLVVRMRDEAQVRAARAAFLARGKK*
Ga0075461_1017819233300006637AqueousGYAVPWLYLEPVGESRTLVVRMRDEAQVRAARAAFLAKGNE*
Ga0075461_1021595823300006637AqueousGYAVPWLYLEPVGESRTLVVRMRDEAQVRAARAAFLAKGKK*
Ga0070749_1018115443300006802AqueousDGYAVPWLYLEPVGESRTLVVRMRDEAQVRAARAAFLAKGNE*
Ga0070754_1009398643300006810AqueousYRKRKIADGYDVPWLYLEPVGKSRTLVVRMRDESEMRAARAAYRAKGKR*
Ga0070754_1010827253300006810AqueousVSVHQKKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK*
Ga0070754_1051387113300006810AqueousVSVHQKKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEVRAARAAFLARGVK*
Ga0070754_1051729823300006810AqueousYDVPWLYLEPKGESRTLVVRMRDESQVNAARAAYLAKGKR*
Ga0075476_1018699933300006867AqueousMIADGYDVPWLYLEPVGESRTLIVRMRDESGVKAARAAFLQKAEK*
Ga0075476_1019765333300006867AqueousMIADGYDVPWLYLEPVGKNRTLVVRMRDESKVRAARAAFLARGKR*
Ga0075477_1011374953300006869AqueousAFHLLRSAWVRHYRQRMIADGYDVPWLYLEPVGKNRTLVVRMRDESEVRAARAAYLAKGKK*
Ga0075477_1043602613300006869AqueousDVPWLYLEPKGESRTLVVRMRDESQVNAARAAYLAKGKR*
Ga0075475_1009703513300006874AqueousMIADGYDVPWLYLEPVGENRTLVVRMRDESQVKAARAAFLAKGKEWAST*
Ga0070750_1038438423300006916AqueousWLYLEPVGENRTLVVRMRDESQVKAARAAFLAKGKEWAST*
Ga0070750_1045307213300006916AqueousAWVRHYRQRMIADGYDVPWLYLEPKGESRTLVVRMRDESEVRAARAAYKAKGKK*
Ga0070750_1047314423300006916AqueousERSYRKRKIADGYDVPWLYLEPVGKSRTLVVRMRDESEMRAARAAYKAKG*
Ga0070746_1028431423300006919AqueousYGHKHAFHLLRSAWKRHYRQQMIADDYDVPWLYLEPVGKSRTLIVRMRDESQVKAARAAYKAKGKK*
Ga0070746_1035965623300006919AqueousWVTHYRQEMIADGYEVPWLYLEPVGKSRTLVVRMRDESEVKASRAAFLARGKK*
Ga0075460_1024463113300007234AqueousGYDHAFHLLRSAWVRQYRKRRIADGYDVPWLYLEPVGESRTLIVRMRDEAEVKAARAAFLARGKK*
Ga0075460_1025386713300007234AqueousVRHYRQRMIADGYDVPWLYLEPKGESRTLVVRMRDESQVNAARAAYLAKGKR*
Ga0075463_1008046713300007236AqueousHQKKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK*
Ga0075463_1025512513300007236AqueousRLLVSVHQKKFQQQIARDGYGREIPWLYLEPVGKDRTLVVRMRDEAEVKAARAAFLAKGKK*
Ga0070745_120228213300007344AqueousWVRHYRQRMIADGYDVPWLYLEPKGESRTLVVRMRDESQVKAARAAFLAKGKR*
Ga0070745_126361813300007344AqueousIAGDGYGFVLPWLYLEPVGKDRTLVVRMRDQAEVEAARAAYKAKGKK*
Ga0070745_129027223300007344AqueousQQQIARDGYGREIPWLYLEPVGKDRTLVVRMRDEAEVKAARAAFLAKGKK*
Ga0070745_135965913300007344AqueousHLLRSAWVRHYRQQMIADGYDVPWLYLEPVGETRTLVVRMRDESEVRAARAAFLARGKK*
Ga0070752_116082813300007345AqueousRAFHLLRSAWVRHYRQQTIADGYAVPWLYLEPVGESRTLVVRMRDESQVKAARAAFLAKGKK*
Ga0070752_138818713300007345AqueousINIDRNRAFHLLRSAWVRHYRQRMIADGYDVPWLYLEPKGESRTLVVRMRDESQVKAARAAYLAKGKK*
Ga0070753_107497313300007346AqueousKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK*
Ga0070753_129088023300007346AqueousNYRYKHAFHLLRSAWVRHYRQQTIADGYAVPWLYLEPVGKNRTLVVRMRDELEVKAARAAYKAKGNK*
Ga0099849_108276063300007539AqueousYLEPVGKNRTLVVRMRDELEVRAARAAFLAKGKE*
Ga0099849_119758613300007539AqueousRVIVNIERQRAFHLLRSAWVRHYRQRMIADGYDVPWLYLEPVGESRTLVVRMRDESEVKASRAAYLAKGKR*
Ga0099849_121194633300007539AqueousVGESRTLVVRMRDESQVRAARAAFLAKGKEWAST*
Ga0070751_105556973300007640AqueousRQRMIADGYDVPWLYLEPVGKNRTLVVRMRDESEVRAARAAYLAKGKK*
Ga0070751_108974413300007640AqueousFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK*
Ga0070751_110930733300007640AqueousAWKTHYRQQTIADGYDVPWLYLEPVGKNRTLVVRMRDELEVKAARAAYKAKGKK*
Ga0070751_114738813300007640AqueousVHQKKFQQQIARDGYGREIPWLYLEPVGKDRTLVVRMRDEAEVKAARAAFLAKGKK*
Ga0070751_127564633300007640AqueousYDVPWLYLEPVGKSRTLIVRMRDESQVKAARAAYKAKGKK*
Ga0070751_137450623300007640AqueousYRQQTIADGYDVPWLYLEPVGESRTLVVRMRDESQVKAARAAFLARGKK*
Ga0099850_116230043300007960AqueousPWLYLEPVGKNRTLVVRMRDESEVRAARAAYLAKGKK*
Ga0099850_117515933300007960AqueousVRHYRQRMIADGYDVPWLYLEPVGKSRTLVVRMRDESEVRAARAAYKARGKK*
Ga0099850_132449123300007960AqueousVHYGYRHAFHLLRSAWVRHYRQRMIADGYDVPWLYLEPVGKNRTLVVRMRDELEVRAARAAFLAKGKKWAST*
Ga0075480_1051110223300008012AqueousVVNIERQRAFHLLRSAWVRHYRQQTIADGYDVPWLYLEPVGESRTLVVRMRDESEVRAARAAFLARGVK*
Ga0129348_123490213300010296Freshwater To Marine Saline GradientDGYAVPWLYLEPVGESRTLVVRMRDEAEVKAARAAFLAKGKEWAST*
Ga0129345_115772413300010297Freshwater To Marine Saline GradientNYKHEHAFHLLRSAWVRHYRQRMIADGYDVPWLYLEPVGKSRTLVVRMRDELEVRAARAAFLAKGKK*
Ga0129345_126923633300010297Freshwater To Marine Saline GradientKHEHAFHLLRSAWVRHYRQRMIADGYDVPWLYLEPVGKNRTLVVRMRDESEVRAARAAYLAKGKK*
Ga0129342_101928973300010299Freshwater To Marine Saline GradientVHYGYDHAFHLLRSAWVRHYRQRMIADGYDVPWLYLEPVGKSRTLVVRMRDESEVRAARAAFLAKGKK*
Ga0129342_110858213300010299Freshwater To Marine Saline GradientRSAWVRHYRQRMIADGYDVPWLYLEPVGKNRTLVVRMRDESEVRAARAAYLAKGKK*
Ga0129342_117400023300010299Freshwater To Marine Saline GradientFHLLRSAWVRHYRQRMIADGYDVPWLYLEPVGESRTLVVRMRDESKVKAARAAFLARGKK
Ga0129351_104853613300010300Freshwater To Marine Saline GradientMIADGYDVPWLYLEPVGESRTLVVRMRDESQVRAARAAFLAKGKEWAST*
Ga0129351_115257713300010300Freshwater To Marine Saline GradientRQRAFHLLRSAWVRHYRQRMIADGYDVPWLYLEPKGKNRTLVVRMRDESEMKAARAAYKAKGKK*
Ga0129351_120986723300010300Freshwater To Marine Saline GradientRQRAFHLLRSAWVRHYRQRMIADGYDVPWLYLEPVGESRTLVVRMRDEAEVKAARAAFLAKGKEWAST*
Ga0136656_104956913300010318Freshwater To Marine Saline GradientIADGYDVPWLYLEPVGKNRTLVVRMRDESEVRAARAAYLAKGKK*
Ga0136656_113429833300010318Freshwater To Marine Saline GradientAWVRHYRQRMIADGYDVPWLYLEPVGESRTLVVRMRDESEVKAARAAFLARGKK*
Ga0129324_1036692423300010368Freshwater To Marine Saline GradientVRHYRQQMIADGYAVPWLYLEPVGESRTLVVRMRDESEMRAARAAYLAKGKK*
Ga0194001_106815733300019730SedimentGYGREIPWLYLEPVGKDRTLVVRMRDESDVKAARAAFLARGKR
Ga0213858_1041251733300021356SeawaterRHYRQQTIADGYDVPWLYLEPVGESRTLVVRMRDESQVKAARAAFLAKGNK
Ga0212025_105368313300022057AqueousMIADGYDVPWLYLEPVGESRTLVVRMRDESKVKAARAAFLARGKK
Ga0212021_103865933300022068AqueousQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEVKAARAAYKAKGKK
Ga0212021_113471013300022068AqueousQKKFQQQIARDGYGREIPWLYLEPVGKDRTLVVRMRGESDVKAARAAFLAKGKK
Ga0212026_101206843300022069AqueousDDGYDVPWLYLEPKGESRTLVVRMRDESQVNAARAAYLAKGKKWAST
Ga0212026_102522833300022069AqueousVHQKKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK
Ga0212028_101472213300022071AqueousRSVWKRHYRQQTIADGYDVPWLYLEPVGKNRTLVVRMRDESEVKAARAAFLAKGKKWAST
Ga0212028_102750313300022071AqueousRMIADGYDVPWLYLEPKGESRTLVVRMRDESQVNAARAAYLAKGKR
Ga0196897_101814113300022158AqueousFHLLRSAWVRHYRQRMIADGYDVPWLYLEPKGESRTLVVRMRDESQVNAARAAYLAKGKR
Ga0196893_102242223300022159AqueousFADGYDVPWLYLEPVGENRTLVVRMRDESQVKAARAAFLAKGKEWAST
Ga0196891_105661833300022183AqueousQQAIADGYDVPWLYLEPKGESRTLVVRMCDESEVRAARAAFLARGKR
Ga0196891_106502533300022183AqueousADGYAVPWLYLEPVGESRTLVVRMRDEAQVRAARAAFLAKGNE
Ga0196899_110090913300022187AqueousLRSAWKRHYRQEMIADGYDVPWLYLEPKGKGRTLVVRMRDEPEVKAARAAFLARGVK
Ga0208149_104283343300025610AqueousHLLRSAWKTHYRQQTIADGYDVPWLYLEPVGKNRTLVVRMRDESQVKAARAAFLARGVK
Ga0208149_110012323300025610AqueousYRQQTIADGYDVPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK
Ga0208004_110842413300025630AqueousYDRARRLLVSVHQKKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK
Ga0208898_103144273300025671AqueousRQEMIADGYEVPWLYLEPLGKSRTLIVRMRDESQVKAARAAFLARGKK
Ga0208898_105936413300025671AqueousHQKKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK
Ga0208898_108125343300025671AqueousAWVRHYRQQTIADGYAVPWLYLEPVGESRTLVVRMRDEAEVKAARAAFLARGVK
Ga0208150_111074113300025751AqueousKFQRKIAIEGYGREIPWLYLEPVGKDRTLVVRMQDESDVKAARAAFLAKG
Ga0208899_109014943300025759AqueousVNYGYKHAFHLLRSAWERSYRKRKIADGYDVPWLYLEPVGKDRTLVVRMRDESEMRAARAAYLAKGKK
Ga0208899_112824113300025759AqueousQKKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEVKAARAAFLQKAEK
Ga0208899_115917913300025759AqueousQIARDGYGREIPWLYLEPAGESRTLVVRMRNESEVKAARAVFLAKGKK
Ga0208899_118828623300025759AqueousRSAWVRHYRQRMIADGYDVPWLYLEPKGESRTLVVRMRDESQVNAARAAYLAKGKR
Ga0208767_118250233300025769AqueousDVPWLYLEPKGESRTLVVRMRDESQVKAARAAYLAKGKR
Ga0208427_106910213300025771AqueousRHYRQRMIADGYDVPWLYLEPVGKNRTLVVRMRDESEVRAARAAYLAKGKK
Ga0208427_117327923300025771AqueousLVSVHQKKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEVRAARAAFLARGVK
Ga0208427_127159523300025771AqueousDGYDVPWLYLEPKGESRTLVVRMRDESQVNAARAAYLAKGKR
Ga0208425_103000513300025803AqueousIEGYGREIPWLYLEPVGKDRTLVVRMQDESDVKAARAAFLAKG
Ga0208425_106512713300025803AqueousVSVHQKKFQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEVKAARAAFLQKAEK
Ga0208543_105969313300025810AqueousLLRSAWERSYRKRKIADGYDVPWLYLEPVGKDRTLVVRMQDESDVKAARAAFLAKG
Ga0208917_107713213300025840AqueousRSAWVRHYRQQAIADGYAVPWLYLEPVGESRTLVVRMRDEAQVRAARAAFLAKGKK
Ga0208917_113171333300025840AqueousVRHYRQEMIADGYDVPWLYLEPVGENRTLVVRMRDESQVKAARAAFLAKGKEWAST
Ga0208644_110776363300025889AqueousWVRHYRQRMIADGYDVPWLYLEPVGKNRTLVVRMRDESEVRAARAAYLAKGKK
Ga0208644_120524733300025889AqueousVRHYRQRMIADGYDVPWLYLEPKGESRTLVVRMRDESQVNAARAAYLAKGKR
Ga0208644_135290313300025889AqueousYRQQTIADGYDVPWLYLEPVGKNRTLVVRMRDESEVKAARAAFLARGVK
Ga0348335_034607_2_1573300034374AqueousTHYRQQTIADGYDVPWLYLEPVGKNRTLVVRMRDELEVKAARAAYKAKGKK
Ga0348335_071608_2_1573300034374AqueousRSYRKRKIADGYDVPWLYLEPVGKSRTLVVRMRSEAEVKAARAAYRAKGKR
Ga0348335_086123_887_10393300034374AqueousQQQIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK
Ga0348335_169012_431_5713300034374AqueousQTIADGYDVPWLYLEPVGKSRTLIVRMRDESQVKAARAAYKAKGKK
Ga0348335_184019_19_1563300034374AqueousMIADGYDVPWLYLEPKGESRTLVVRMRDESQVNAARAAYLAKGKR
Ga0348336_104635_803_9493300034375AqueousRQQTIADGYAVPWLYLEPVGESRTLVVRMRDEAEVKAARAAFLARGVK
Ga0348336_187921_420_5663300034375AqueousRQQTIADGYAVPWLYLEPVGESRTLVVRMRDEAQVRAARAAFLAKGKK
Ga0348337_061083_1289_14323300034418AqueousIARDGYGREIPWLYLEPVGKNRTLVVRMRDESEMKAARAAYKAKGKK
Ga0348337_079080_997_11553300034418AqueousERSYRKRKIADGYDVPWLYLEPVGKSRTLVVRMRDESEMRAARAAYRAKGKR
Ga0348337_102614_43_1803300034418AqueousMIADGYDVPWLYLEPKGKSRTLVVRMCDESAVRAARAAYKAKGKK
Ga0348337_152251_515_6493300034418AqueousIADGYDVPWLYLEPVGESRTLVVRMRDESEVKAARAAFLAKGKK


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