Metagenome Family F088718

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088718
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	75 residues
Representative Sequence	EFMQLYGRAGLYNDYVSYCADARKSRRDARIKAEKRKEKIKDIIMKVILAILITALLSGVVTVLAIIAKKKGII
Number of Associated Samples	87
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.67 %
% of genes near scaffold ends (potentially truncated)	94.50 %
% of genes from short scaffolds (< 2000 bps)	88.99 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.376 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (25.688 % of family members)
Environment Ontology (ENVO)	Unclassified (73.394 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.578 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.80% β-sheet: 0.00% Coil/Unstructured: 40.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF11351	GTA_holin_3TM	19.27
PF08291	Peptidase_M15_3	5.50
PF00959	Phage_lysozyme	3.67
PF05838	Glyco_hydro_108	2.75
PF11753	DUF3310	1.83
PF09588	YqaJ	1.83
PF01381	HTH_3	0.92
PF07508	Recombinase	0.92
PF01726	LexA_DNA_bind	0.92
PF06378	DUF1071	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3926	Lysozyme family protein	General function prediction only [R]	2.75
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.06 %
Unclassified	root	N/A	33.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.38 %
Unclassified	root	N/A	33.94 %
Viruses	superkingdom	All Organisms → Viruses	14.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.38 %
Unclassified	root	N/A	33.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.93 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	2.75 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	44.04 %
Unclassified	root	N/A	33.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.50 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	2.75 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	44.04 %
Unclassified	root	N/A	33.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.67 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	2.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	44.04 %
Unclassified	root	N/A	33.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.67 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.75 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.94 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	24.77 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	18.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.67 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.94 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	24.77 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	18.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.67 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.94 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	24.77 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	18.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.67 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.94 %
Flavobacteriales bacterium TMED84	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	24.77 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	18.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.67 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10208991	Not Available	539	Open in IMG/M
3300000116\|DelMOSpr2010_c10028531	All Organisms → Viruses → Predicted Viral	2632	Open in IMG/M
3300000116\|DelMOSpr2010_c10071050	All Organisms → Viruses → Predicted Viral	1416	Open in IMG/M
3300000116\|DelMOSpr2010_c10210671	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	616	Open in IMG/M
3300001589\|JGI24005J15628_10060597	Not Available	1413	Open in IMG/M
3300001589\|JGI24005J15628_10203399	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	554	Open in IMG/M
3300001853\|JGI24524J20080_1018627	Not Available	734	Open in IMG/M
3300001853\|JGI24524J20080_1018644	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	733	Open in IMG/M
3300002483\|JGI25132J35274_1006876	All Organisms → Viruses → Predicted Viral	2847	Open in IMG/M
3300002483\|JGI25132J35274_1122815	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	519	Open in IMG/M
3300004448\|Ga0065861_1000132	All Organisms → cellular organisms → Bacteria → Proteobacteria	1441	Open in IMG/M
3300004951\|Ga0068513_1019601	Not Available	723	Open in IMG/M
3300006029\|Ga0075466_1034058	Not Available	1573	Open in IMG/M
3300006749\|Ga0098042_1061009	Not Available	1004	Open in IMG/M
3300006802\|Ga0070749_10514060	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	651	Open in IMG/M
3300006810\|Ga0070754_10286982	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	742	Open in IMG/M
3300006869\|Ga0075477_10413653	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	523	Open in IMG/M
3300006874\|Ga0075475_10416335	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	538	Open in IMG/M
3300006874\|Ga0075475_10445882	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	516	Open in IMG/M
3300006919\|Ga0070746_10081812	All Organisms → Viruses → Predicted Viral	1632	Open in IMG/M
3300006919\|Ga0070746_10386776	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	629	Open in IMG/M
3300006920\|Ga0070748_1207724	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	713	Open in IMG/M
3300006920\|Ga0070748_1257470	Not Available	627	Open in IMG/M
3300006921\|Ga0098060_1094776	Not Available	848	Open in IMG/M
3300006921\|Ga0098060_1157180	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	629	Open in IMG/M
3300006947\|Ga0075444_10015705	All Organisms → cellular organisms → Bacteria	4029	Open in IMG/M
3300007345\|Ga0070752_1308182	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	602	Open in IMG/M
3300007538\|Ga0099851_1059328	All Organisms → Viruses → Predicted Viral	1494	Open in IMG/M
3300007540\|Ga0099847_1061818	Not Available	1167	Open in IMG/M
3300007542\|Ga0099846_1086071	All Organisms → Viruses → Predicted Viral	1166	Open in IMG/M
3300007640\|Ga0070751_1235740	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	700	Open in IMG/M
3300008012\|Ga0075480_10582043	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	531	Open in IMG/M
3300008012\|Ga0075480_10593947	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	524	Open in IMG/M
3300009001\|Ga0102963_1313045	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	617	Open in IMG/M
3300009001\|Ga0102963_1369542	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	563	Open in IMG/M
3300009124\|Ga0118687_10401495	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	530	Open in IMG/M
3300009508\|Ga0115567_10918047	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	519	Open in IMG/M
3300009508\|Ga0115567_10974129	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	501	Open in IMG/M
3300010148\|Ga0098043_1231194	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	506	Open in IMG/M
3300010296\|Ga0129348_1008335	All Organisms → Viruses → Predicted Viral	3770	Open in IMG/M
3300010296\|Ga0129348_1096438	Not Available	1044	Open in IMG/M
3300010300\|Ga0129351_1147038	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	931	Open in IMG/M
3300010300\|Ga0129351_1388062	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	522	Open in IMG/M
3300017710\|Ga0181403_1061265	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	784	Open in IMG/M
3300017714\|Ga0181412_1038981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1245	Open in IMG/M
3300017720\|Ga0181383_1073716	Not Available	916	Open in IMG/M
3300017727\|Ga0181401_1013799	Not Available	2497	Open in IMG/M
3300017739\|Ga0181433_1023726	All Organisms → Viruses → Predicted Viral	1620	Open in IMG/M
3300017739\|Ga0181433_1052339	Not Available	1038	Open in IMG/M
3300017744\|Ga0181397_1079925	Not Available	873	Open in IMG/M
3300017745\|Ga0181427_1031273	Not Available	1326	Open in IMG/M
3300017746\|Ga0181389_1116390	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	728	Open in IMG/M
3300017750\|Ga0181405_1175654	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	523	Open in IMG/M
3300017752\|Ga0181400_1133316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300017752\|Ga0181400_1147158	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	669	Open in IMG/M
3300017753\|Ga0181407_1001696	Not Available	7050	Open in IMG/M
3300017755\|Ga0181411_1073287	Not Available	1033	Open in IMG/M
3300017759\|Ga0181414_1210757	Not Available	501	Open in IMG/M
3300017762\|Ga0181422_1002190	Not Available	6579	Open in IMG/M
3300017763\|Ga0181410_1065213	Not Available	1095	Open in IMG/M
3300017765\|Ga0181413_1242424	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	532	Open in IMG/M
3300017779\|Ga0181395_1004507	Not Available	5278	Open in IMG/M
3300017781\|Ga0181423_1192562	Not Available	774	Open in IMG/M
3300017783\|Ga0181379_1198226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300017964\|Ga0181589_10119347	All Organisms → Viruses → Predicted Viral	1892	Open in IMG/M
3300018036\|Ga0181600_10148880	Not Available	1304	Open in IMG/M
3300018041\|Ga0181601_10526937	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	612	Open in IMG/M
3300018416\|Ga0181553_10652393	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	553	Open in IMG/M
3300018416\|Ga0181553_10669769	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	544	Open in IMG/M
3300018418\|Ga0181567_10810231	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	592	Open in IMG/M
3300018421\|Ga0181592_10821277	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	611	Open in IMG/M
3300018426\|Ga0181566_10834204	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	627	Open in IMG/M
3300019459\|Ga0181562_10142294	All Organisms → Viruses → Predicted Viral	1313	Open in IMG/M
3300019459\|Ga0181562_10346253	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	728	Open in IMG/M
3300020175\|Ga0206124_10170043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	871	Open in IMG/M
3300020191\|Ga0181604_10333695	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	676	Open in IMG/M
3300020436\|Ga0211708_10108647	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1089	Open in IMG/M
3300021335\|Ga0213867_1053934	All Organisms → Viruses → Predicted Viral	1529	Open in IMG/M
3300021958\|Ga0222718_10424731	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	659	Open in IMG/M
3300021958\|Ga0222718_10456228	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	627	Open in IMG/M
3300021959\|Ga0222716_10634557	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	577	Open in IMG/M
3300021960\|Ga0222715_10301324	Not Available	911	Open in IMG/M
3300021964\|Ga0222719_10640541	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	611	Open in IMG/M
3300022057\|Ga0212025_1041924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	786	Open in IMG/M
3300022072\|Ga0196889_1015963	Not Available	1599	Open in IMG/M
3300022167\|Ga0212020_1018756	All Organisms → Viruses → Predicted Viral	1104	Open in IMG/M
3300022183\|Ga0196891_1052211	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	742	Open in IMG/M
3300022187\|Ga0196899_1156302	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	630	Open in IMG/M
3300022907\|Ga0255775_1337776	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	509	Open in IMG/M
3300022928\|Ga0255758_10005606	Not Available	10212	Open in IMG/M
3300022928\|Ga0255758_10209338	Not Available	900	Open in IMG/M
3300022928\|Ga0255758_10446431	Not Available	501	Open in IMG/M
3300022929\|Ga0255752_10002266	Not Available	21361	Open in IMG/M
3300023175\|Ga0255777_10625957	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	529	Open in IMG/M
3300024301\|Ga0233451_10072132	Not Available	1846	Open in IMG/M
3300025071\|Ga0207896_1064306	Not Available	581	Open in IMG/M
3300025127\|Ga0209348_1100903	Not Available	897	Open in IMG/M
3300025132\|Ga0209232_1100908	Not Available	974	Open in IMG/M
3300025646\|Ga0208161_1105681	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	768	Open in IMG/M
3300025674\|Ga0208162_1070524	All Organisms → Viruses → Predicted Viral	1106	Open in IMG/M
3300025687\|Ga0208019_1211272	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	501	Open in IMG/M
3300025759\|Ga0208899_1081343	Not Available	1263	Open in IMG/M
3300025881\|Ga0209309_10480861	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	519	Open in IMG/M
3300027668\|Ga0209482_1095770	Not Available	961	Open in IMG/M
3300029448\|Ga0183755_1013325	Not Available	3069	Open in IMG/M
3300031626\|Ga0302121_10000435	All Organisms → cellular organisms → Bacteria	22984	Open in IMG/M
3300032277\|Ga0316202_10440284	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED84	611	Open in IMG/M
3300034375\|Ga0348336_067845	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1355	Open in IMG/M
3300034375\|Ga0348336_083643	Not Available	1144	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.25%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.83%
Sediment	Environmental → Aquatic → Sediment	0.92%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	32.11%
Strait	Environmental → Aquatic → Marine → Strait	19.27%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.51%
Oceanic	Environmental → Aquatic → Marine → Oceanic	13.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.26%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.67%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.67%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	31.19%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	19.27%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	16.51%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	13.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.26%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.83%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	25.69%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	19.27%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	16.51%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.84%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.59%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.67%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.67%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.67%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.75%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.83%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	0.92%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.92%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.92%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.92%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.92%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001853	Marine viral communities from the Subarctic Pacific Ocean - LP-49	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004951	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022907	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300024301	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025881	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_102089911	3300000115	Marine	KDQLREFMQLYGRANLYNDYIQYCADARKARKEARIKAQKRKQHIQDMILKVILGILIATVLTGVIGVLIIIAKKKGII*
DelMOSpr2010_100285314	3300000116	Marine	MQLYGRANLYKDYVQFCADARVARKEARVKQQKRKDYIKDMALKIILGILIATVLAGVVGVLLVVAKKKGII*
DelMOSpr2010_100710501	3300000116	Marine	ALEQIRVKKDQLREFMQLYGRANLYNDYIQYCADARKQRKEARIKAQKRKQHIQDMILKIILGILIATVLTGVIGVLFVVAKKKGII*
DelMOSpr2010_102106711	3300000116	Marine	ALEQIRVKKDQLREFMQLYGRANLYNDYIQYCADARKARKEARIKAARRKQHIQDTIMKVILAILITAVLSGAVAVLYIIAKKKGLI*
JGI24005J15628_100605971	3300001589	Marine	MALESIRVKQEKLREYMQLYGRANLYTDYIKFCAISRKERKEARIKDAKRKEHIKDVILKVILGILITALLSGVVGVLLVIAKKKGII*
JGI24005J15628_102033991	3300001589	Marine	QEKLREYMQLYGRANLYKDYVQFCADARVARKEARFKQQKRKDYIKDMALKIILGILIATVLTGVIGVLFVVAKKKGII*
JGI24524J20080_10186271	3300001853	Marine	MQLFGRANLYTDYIKFCAISRKERKEARIKAAKRKEHIKDVILKVILGILITAMLSGVLGVLLIVAKKKGII*
JGI24524J20080_10186441	3300001853	Marine	YMQLYGRANLYKDYIQFCADARVARKEQRIKAQKRREYIRDMALKIILGILITAMLAGVVTVLFVVAKKKGII*
JGI25132J35274_10068762	3300002483	Marine	MALEEIRVKNDQLREFMQLYGRAGLYNDYVTFCAEARKKRRQAKIDAEKRREKIKEMALKVILAILITALLSGVVTVLAIIAKKKGII*
JGI25132J35274_11228152	3300002483	Marine	YGRAGLYNDYVTFCAEARKKRRQAKIDAEKRREKIKEIALKVILAILITALLSGVVTVLAIIAKKKGII*
Ga0065861_10001321	3300004448	Marine	KLREYMQLYGRANLYKDYIQFCADARVARKEERIKAQKRREYIRDMALKIILGILIATVFAGVVGVLFVVAKKKGII*
Ga0068513_10196012	3300004951	Marine Water	MQLYGRAGLWTDYQQYCAEARKARKEAAEKAKKRRAEMKELFLKIILGVLIATMFAGAITILVIIAKKKGII*
Ga0075466_10340581	3300006029	Aqueous	YMQLYGRAGLWTDYQQYCADARVARKEARVKQEKRIEYIKDMTLKVVLAILITALLSGVITVLVIIAKKKGII*
Ga0098042_10610094	3300006749	Marine	MQLYGRAGLWTDYQQYCADARVARKEARVKQEKRIEYIKDMTLKIVLGILITALLSGVITVLVIIAKKKGII*
Ga0070749_105140601	3300006802	Aqueous	REFMQIYGRAGLYNDYVSYCADARKARRDARINAEKRKEKIKETVMKVILAILITALLSGVVTVLAIIAKKKGLI*
Ga0070754_102869821	3300006810	Aqueous	EEIRVKNEQLREFMQLYGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGII*
Ga0075477_104136533	3300006869	Aqueous	YGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGLI*
Ga0075475_104163351	3300006874	Aqueous	EFMQLYGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGLI*
Ga0075475_104458822	3300006874	Aqueous	EEIRVKNEQLREFMQLYGRANLYNDYISYCADARKARKEARIKAEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARKKGLI*
Ga0070746_100818121	3300006919	Aqueous	QLREFMQLYGRANLYNDYIQYCADARKQRKEARIKAQKRKQHIQDMILKIILGILIATVLTGVIGVLFVVAKKKGII*
Ga0070746_103867761	3300006919	Aqueous	ADARKARKEARIKAEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARKKGLI*
Ga0070748_12077241	3300006920	Aqueous	LREFMQLYGRANLYNDYIQYCADARKQRKEARIKAQKRKQHIQDMILKIILGILIATVLTGVIGVLLVVAKKKGII*
Ga0070748_12574701	3300006920	Aqueous	MQLYGRANLYTDYIQFCAEARKSRKEARVKTAKRKQHIQDTIMKIILAILITAVLSGAVAALFLIAKKKGLI*
Ga0098060_10947764	3300006921	Marine	YNDYIQYCADARRARKEAKIKAAKRKQQIQDTILKVILAILITAVLSGAVAVLFIIAKKKGII*
Ga0098060_11571802	3300006921	Marine	LREFMQLYGRANLYNDYIQYCADARKQRKEARIKAQKRKQHIQDMILKIILGILIATVLAGVIGVLFIIAKKKGIIQ*
Ga0075444_100157051	3300006947	Marine	EYMQLFGRANLYTDYIQFCADCRVSRKEARVKVQKRREYIRDMFLKIVLGILITALLSGVIAVLFIVAKKKGLI*
Ga0070752_13081821	3300007345	Aqueous	NDYVSYCADARKARREARIKAEKRREHIKETVMKVILAILITALLSGVVTVLAIIAKKKGII*
Ga0099851_10593281	3300007538	Aqueous	LREFMQLYGRANLYNDYIRFCADARKARQEAKLKAEKQREKIKDIILKATLAILISALLAGAVTVLAIIARKKGLI*
Ga0099847_10618181	3300007540	Aqueous	EQIRVKKDQLREFMQLYGRANLYNDYIQYCADARKARKEARIKAAKRKQHIQDTIMKVILAILITAVLSGAVAVLFIIAKKKGII*
Ga0099846_10860714	3300007542	Aqueous	MALEEIRVKNEQLREFMQLYGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGLI*
Ga0070751_12357401	3300007640	Aqueous	YNDYISYCADARKARKEARIKAEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARKKGLI*
Ga0075480_105820431	3300008012	Aqueous	EFMQLYGRANLYNDYIQYCADARKARKEARIKAQRRREHIKDMVLKIILGILIATMLTGVIGVLIIIAKKKGII*
Ga0075480_105939471	3300008012	Aqueous	ALEEIRVKNEQLREFMQLYGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGII*
Ga0102963_13130451	3300009001	Pond Water	AGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGLI*
Ga0102963_13695423	3300009001	Pond Water	YCADARKARKEARIKAEQQREKIKDIALKIILAILVSALLAGVVTVLAIIARKKGLI*
Ga0118687_104014951	3300009124	Sediment	FMQLYGRAGLYNDYVSYCADARKSRKDARIKAEKRKEKIKEIVMKVVLAILITALLSGVVTVLAIIAKKKGII*
Ga0115567_109180471	3300009508	Pelagic Marine	NEQLREFMQLYGRANLYTDYVRFCADARKARQEAKIKAQKQREKIKDIMMKVILAILITALLSGVITVLAIIAKKKGII*
Ga0115567_109741293	3300009508	Pelagic Marine	FMQLYGRANLYNDYIQYCADARKARKEARIKAQRRREHIKDMVLKVILGILIATVLTGVIGVLIIIAKKKGII*
Ga0098043_12311942	3300010148	Marine	QIRVKQEKLREYMQLYGRAGLWTDYQQYCADARVARKEARVKQEKRIEYIKDMTLKIVLGILITALFSGVITVLVIIAKKKGII*
Ga0129348_10083351	3300010296	Freshwater To Marine Saline Gradient	EQIRVKKDQLREFMQLYGRANLYNDYIQYCADARKARKEARIKAQKRKQHIQDMVLKIILGILIATVLTGVIGVLIIIAKKKGII*
Ga0129348_10964381	3300010296	Freshwater To Marine Saline Gradient	ANLYNDYISYCADARKARKEARIKAEKQREKFKEIFLKVILGILITALFSGVVTVLAIIAKKKGII*
Ga0129351_11470381	3300010300	Freshwater To Marine Saline Gradient	LEQIRVKKDQLREFMQLYGRANLYNDYIQYCADARKARKESRIKAAKRKQHIQDTIMKVILAILITAVLSGAVAVLYIIAKKKGLI*
Ga0129351_13880623	3300010300	Freshwater To Marine Saline Gradient	ANLYNDYISYCADARKARKEARIKAEQQREKIKDIALKVVLAILVSALLAGVVTVLAIIARKKGLI*
Ga0181403_10612651	3300017710	Seawater	ETLREFMQLYGRANLYNDYLAHCAEARKRRKESAIARKKRSEKIQDIILKVVLGILITALFSGVITVLVIIARKRGLI
Ga0181412_10389811	3300017714	Seawater	LEQIRVKKDQIREFMQLYGRANLYTDYIQYCADARKARKEARIKALKRKQKMQDTILKVVLAILITAVLSGAVAVLFIIAKKKGII
Ga0181383_10737161	3300017720	Seawater	KLREYMQLYGRANLYKDYVQFCADARVARKEARVKQEKRIEYIKDMALKIVLGILITALLAGVVTVLVVIAKKRGII
Ga0181401_10137998	3300017727	Seawater	RVKKDQLREFMQLYGRANLYNDYIQYCADARKARKEARIKAQKRKQHIQDMILKIILGILIATVLAGVIGVLFIIAKKKGIIQ
Ga0181433_10237261	3300017739	Seawater	QIRVKQEKLREYMQLYGRANLYKDYVQFCADARKSRKEAMIKQQKRIEYIKDMVMKIILGILITALLAGVVTVLGIIAKKKGII
Ga0181433_10523394	3300017739	Seawater	YGRANLYKDYVQFCADARVARKEARVKQEKRIEHIKDIALKIVLGILITALLAGVVTVLVVIAKKRGII
Ga0181397_10799253	3300017744	Seawater	YMQLYGRANLYKDYVQFCADARVARKEARVKQEKRIEYIKDIALKIVLGILITALLAGVVTVLVVIAKKRGII
Ga0181427_10312731	3300017745	Seawater	IRVKQEKLREYMQLYGRANLYKDYVQFCADARKSRKEAMIKQQKRIEYIKDMVMKIILGILITALLAGVVTVLGIIAKKKGII
Ga0181389_11163901	3300017746	Seawater	KLREYMQLYGRANLYKDYVQFCADARVARKEARVKQEKRIEYIKDIALKIVLGILITALLAGVVTVLVVIAKKRGII
Ga0181405_11756541	3300017750	Seawater	LEQIRVKKDQIREFMQLYGRANLYTDYIQYCADARKARKEARIKALKRKQKMQDTILKVVLAILITAVLSGAVAVLFIIAKKKGLI
Ga0181400_11333162	3300017752	Seawater	TDYIQYCADARKARKEARIKAAKRKQKIQDTILKVVLAILITAVLSGAVAVLFIIAKKKGII
Ga0181400_11471581	3300017752	Seawater	EIRRKKETLREFMQLYGRANLYNDYLAHCAEARKRRKESAIARKKRSEKIQDIILKVVLGILITALFSGVITVLVIIARKRGLI
Ga0181407_100169615	3300017753	Seawater	QIRVKKDQIREFMQLYGRANLYTDYIQYCADARKARKEARIKAAKRKQKIQDTILKVVLAILITAVLSGAVAVLFIIAKKKGII
Ga0181411_10732871	3300017755	Seawater	KQEKLREYMQLYGRAGLWTDYQQYCADARVARKDARVKQEKRIEYIKDMTLKIVLAILITALLSGVITVLVIIAKKKGII
Ga0181414_12107573	3300017759	Seawater	QLYGRANLYKDYVQFCADARVARKEARVKQEKRIEYIKDIALKIVLGILITALLAGVVTVLVVIAKKRGII
Ga0181422_10021901	3300017762	Seawater	NEQLREFMQLYGRAGLYNDYVSYCADARKSRRDARIKAEKRKEKIKEIVMKVVLAILITALLSGVVTVLAIIAKKKGLI
Ga0181410_10652131	3300017763	Seawater	ALEQIRVKQEKLREYMQLYGRANLYKDYVQFCADARVARKEARVKQEKRIEYIKDIALKIVLGILITALLAGVVTVLVVIAKKRGII
Ga0181413_12424241	3300017765	Seawater	MALEQIREKHDKLREYMQRYGRAGLWTDYQQYCADARVARKDARVKQEKRIEYIKDMTLKIVLAILITALLSGVITVLVIIAKKKGII
Ga0181395_10045071	3300017779	Seawater	NLYTDYIQYCADARKARKEARIKAAKRKQKIQDTILKVVLAILITAVLSGAVAVLFIIAKKKGII
Ga0181423_11925621	3300017781	Seawater	LYTDYIQYCADARKARKEARIKAAKRKQKIQDTILKVVLAILITAVLSGAVAVLFIIAKKKGII
Ga0181379_11982262	3300017783	Seawater	EQIRVKKDQIREFMQLYGRANLYTDYIQYCADARKARKEARIKAAKRKQKIQDTILKVVLAILITAVLSGAVAVLFIIAKKKGII
Ga0181589_101193471	3300017964	Salt Marsh	NDYVSFCAEARKNRRQAKIDAEKRKEKIKDTVLKVILAILITALLSGVVTVLAIIAKKKGII
Ga0181600_101488801	3300018036	Salt Marsh	RKEARIKGEQQREKIKDIALKIVLAILVSALLAGAVTVLAIIARKKGLI
Ga0181601_105269371	3300018041	Salt Marsh	NDYLSYCADARKARKEARIKGEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARNKGII
Ga0181553_106523933	3300018416	Salt Marsh	ALEEIRVKQEQLREFMQLYGRAGLYNDYVSFCAEARKNRRQAKIDAEKRKEKIKEIVLKVILAILITALLSGVVTVLAIIAKKKGII
Ga0181553_106697691	3300018416	Salt Marsh	QLREFMQLYGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVILAILITALLSGVVTVLAIIAKKKGII
Ga0181567_108102311	3300018418	Salt Marsh	NDYVAFCAEARKNRKEAKIKAEKQREKIKETVLKVILAILITGMLAGVITVLAIIAKKKGII
Ga0181592_108212771	3300018421	Salt Marsh	NLYNDYISYCADARKARKEARIKAEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARKKGLI
Ga0181566_108342041	3300018426	Salt Marsh	REFMQLYGRAGLYNDYVAFCAEARKNRKQAKIDAEKRKEKIKEIILKVILAILITALFSGVITVLAIIARKKGII
Ga0181562_101422941	3300019459	Salt Marsh	IRVKNEQLREFMQLYGRANLYNDYIFYCADARKARKEARIKGEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARNKGII
Ga0181562_103462534	3300019459	Salt Marsh	GRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGLI
Ga0206124_101700431	3300020175	Seawater	KKKDQIREFMQLYGRANLYTDYIQYCADARKARKEARIKALKRKQKIQDTILKVVLAILITAVLSGAVAVLFIIAKKKGII
Ga0181604_103336951	3300020191	Salt Marsh	LYGRANLYNDYISYCADARKARKEARIKGEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARKKGLI
Ga0211708_101086471	3300020436	Marine	REFMQLYGRPNLYTDYLAHCSEARKRRKQAAIDRQKRKEKIEDIILKTVLAILITALCAGVVTVLAIIAKKKGII
Ga0213867_10539341	3300021335	Seawater	NEQLREFMQLYGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGLI
Ga0222718_104247311	3300021958	Estuarine Water	MQLYGRAGLYNDYVSYCADARKARKEARINAEKRKEKIKETVMKVILAILITALLSGVVTILAIIAKKKGII
Ga0222718_104562281	3300021958	Estuarine Water	EFMQLYGRAGLYNDYVSYCADARKSRRDARIKAEKRKEKIKDIIMKVILAILITALLSGVVTVLAIIAKKKGII
Ga0222716_106345573	3300021959	Estuarine Water	LREFMQLYGRAGLYNDYVSFCAEARKNRKQARIDAEKRKEKIKDMVLKIILGILITALFSGVITVLVIIAKKKGII
Ga0222715_103013244	3300021960	Estuarine Water	GRANLYNDYISYCADARKARKEARIKAEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARKKGLI
Ga0222719_106405411	3300021964	Estuarine Water	LREFMQLYGRAGLYNDYVSFCAEARKNRKQAKIDAEKRKEKIKDIVLKVILGILITALFSGVVTVLAIIAKKKGII
Ga0212025_10419244	3300022057	Aqueous	YCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGLI
Ga0196889_10159635	3300022072	Aqueous	KQIRVKQEKLREYMQLYGRAGLWTDYQQYCADARVARKEARVKQEKRIEYIKDMTLKVVLAILITALLSGVITVLVIIAKKKGII
Ga0212020_10187561	3300022167	Aqueous	IRVKNEQLREFMQLYGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGLI
Ga0196891_10522111	3300022183	Aqueous	MQLYGRANLYTDYVRFCADARKARQEAKIKAQKQREKIKDIMMKVILAILITALLSGVITVLAIIAKKKGII
Ga0196899_11563022	3300022187	Aqueous	EFMQLYGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGLI
Ga0255775_13377761	3300022907	Salt Marsh	KNEQLREFMQLYGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGLI
Ga0255758_100056061	3300022928	Salt Marsh	GRANLYNDYIFYCADARKARKEARIKGEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARNKGII
Ga0255758_102093384	3300022928	Salt Marsh	LYNDYIRFCADARKGRQEAKLKAEKQREKIKDIILKGLLAILISALLAGAVTVLAIIARKKGLI
Ga0255758_104464312	3300022928	Salt Marsh	MQLYGRANLYNDYISYCADARKARKEARIKAEQQREKIKDIALKIILAILVSALLAGVVTVLAIIARKKGLI
Ga0255752_1000226642	3300022929	Salt Marsh	MQLYGRANLYNDYIFYCADARKARKEARIKGEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARNKGII
Ga0255777_106259573	3300023175	Salt Marsh	REFMQLYGRAGLYNDYIAFCAEARKNRKQAKIDAEKRKEKIKEIVLKVILAILITALFSGVITVLAIIARKKGII
Ga0233451_100721321	3300024301	Salt Marsh	IRVKNEQLREFMQLYGRAGLYNDYVSYCADARKARREARINAEKRKEKIKETVMKVVLAILITALLSGVVTVLAIIAKKKGII
Ga0207896_10643061	3300025071	Marine	GRANLYKDYIQFCADARVSRKEARVKQQKRKDYIKDMALKIILGILIATVLTGVIGVLFVVAKKKGII
Ga0209348_11009034	3300025127	Marine	YGRANLYSDYLAFCAEARKKRKQAAIDRQKRKEKIQDIILKTVLAILITAACAGVVTVLAVIAKKKGII
Ga0209232_11009084	3300025132	Marine	RKKEILREFMQIHGRANLYSDYIAFCAEARKNRKQARLDAHKKREHIKDVFLKVILGILITALFSGVITVLAIIARKRGLI
Ga0208161_11056814	3300025646	Aqueous	CADARKARKEARIKAEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARKKGLI
Ga0208162_10705244	3300025674	Aqueous	EFMQLYGRANLYNDYISYCADARKARKEARIKAEKQREKFKEIFLKVILGILITALFSGVVTVLAIIAKKKGII
Ga0208019_12112721	3300025687	Aqueous	LREFMQLYGRANLYNDYISYCADARKARKEARIKAEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARKKGLI
Ga0208899_10813435	3300025759	Aqueous	ADARKARQEAKLKAEQQREKIKDIVLKIVLAILVSALLAGVVTVLAIIARKKGLI
Ga0209309_104808611	3300025881	Pelagic Marine	NEQLREFMQLYGRANLYTDYVRFCADARKARQEAKIKAQKQREKIKDIMMKVILAILITALLSGVITVLAIIAKKKGII
Ga0209482_10957703	3300027668	Marine	FMALESIRVKQEKLREYMQLYGRANLYTDYIQFCADCRVSRREARVKAQKRTEHIKDVILKVILGILITAMLAGVVGVLLVIAKKKGII
Ga0183755_10133259	3300029448	Marine	QLYGRANLYNDYIQYCADARKARKEARIKATKRKQHIQDTIMKVILAILITAVLSGAVAVLFIIAKKKGII
Ga0302121_1000043517	3300031626	Marine	MALESIRVKQEKLREYMQLFGRANLYTDYIQFCADCRVSRKEARVKAQKRRQYIQDMFLKIVLGILITALFTGVATVLFILAKKKGLI
Ga0316202_104402841	3300032277	Microbial Mat	LEQIRVKKDQLREFMQLYGRANLYTDYIQYCADARKARKEARIQAAKRKQKIQDTIMKVILAILITAVLSGAVAVLFIIAKKKGII
Ga0348336_067845_1058_1324	3300034375	Aqueous	MALEEIRVKNEQLREFMQLYGRANLYNDYISYCADARKARKEARIKAEQQREKIKDIALKIVLAILVSALLAGVVTVLAIIARKKGLI
Ga0348336_083643_1_216	3300034375	Aqueous	QLYGRANLYNDYIQYCADARKQRKEARIKAQKRKQHIQDMILKIILGILIATVLTGVIGVLFVVAKKKGII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088718

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences