NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F088640

Metagenome Family F088640

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F088640
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 76 residues
Representative Sequence MALHYCSLHTRLFSRRGQRWVTFSPATIHEIRGYYDLLCSTNRDASFLHVIEVSCDQCAATGQTIARSQARPNACGE
Number of Associated Samples 76
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 91.74 %
% of genes near scaffold ends (potentially truncated) 17.43 %
% of genes from short scaffolds (< 2000 bps) 79.82 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (68.807 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(29.358 % of family members)
Environment Ontology (ENVO) Unclassified
(33.028 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.385 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.
1JGI1027J11758_129130121
2JGI10216J12902_1039115903
3JGI10216J12902_1130976791
4Ga0066397_101579661
5Ga0066395_108515971
6Ga0066680_101596573
7Ga0066680_103107911
8Ga0066680_103705991
9Ga0066679_105477031
10Ga0066679_107585582
11Ga0066685_101802482
12Ga0066675_101294141
13Ga0065705_103282322
14Ga0065707_101191042
15Ga0066388_1018938841
16Ga0066388_1020804241
17Ga0070689_1008989751
18Ga0070668_1002443353
19Ga0066689_104481311
20Ga0066692_104686232
21Ga0066699_111882701
22Ga0066705_100132244
23Ga0066702_109605542
24Ga0066708_104796282
25Ga0066903_1004391112
26Ga0066903_1020843063
27Ga0066903_1031017521
28Ga0066903_1060890462
29Ga0066696_103520822
30Ga0066656_105869581
31Ga0066652_1018590711
32Ga0066658_100221434
33Ga0066665_102534272
34Ga0066665_109875161
35Ga0066659_104997232
36Ga0075428_1000194036
37Ga0075428_1000420935
38Ga0075428_1000678023
39Ga0075428_1001090727
40Ga0075428_1002466132
41Ga0075428_1006222122
42Ga0075428_1009895033
43Ga0075431_1003029114
44Ga0075431_1021362671
45Ga0075433_103528422
46Ga0075433_111484111
47Ga0075420_1000892462
48Ga0075424_1016308731
49Ga0075424_1023734401
50Ga0075419_101282633
51Ga0075435_1008124461
52Ga0066710_1039577331
53Ga0099829_101636811
54Ga0099828_108498801
55Ga0099827_100501504
56Ga0099827_107608992
57Ga0111539_109956522
58Ga0075418_103872622
59Ga0066709_1011703241
60Ga0114129_100638503
61Ga0114129_101553413
62Ga0114129_102663692
63Ga0114129_104376193
64Ga0114129_110160694
65Ga0114129_130327591
66Ga0111538_133049772
67Ga0075423_120057201
68Ga0105249_102240782
69Ga0126374_104947163
70Ga0126372_100300981
71Ga0126379_100527652
72Ga0137383_102246792
73Ga0137383_102596451
74Ga0137383_105358142
75Ga0137365_102361442
76Ga0137381_102039843
77Ga0137381_117470592
78Ga0137379_117078581
79Ga0137378_102729511
80Ga0137377_109739762
81Ga0137387_103683871
82Ga0137387_104796832
83Ga0137386_104418601
84Ga0137384_101232823
85Ga0137384_103762222
86Ga0137384_109582472
87Ga0137361_100282386
88Ga0137394_112340821
89Ga0164299_113856742
90Ga0126369_133917301
91Ga0163162_111052082
92Ga0137418_100141078
93Ga0134072_103538391
94Ga0132255_1041342931
95Ga0182033_110363802
96Ga0207706_101400263
97Ga0207689_114879991
98Ga0207668_102264812
99Ga0207675_1004510781
100Ga0209180_100085078
101Ga0209814_102867891
102Ga0209283_101276841
103Ga0209481_100199936
104Ga0209481_101769912
105Ga0209488_102418212
106Ga0209382_100970423
107Ga0209382_102813852
108Ga0209382_107373172
109Ga0306920_1034588471
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.14%    β-sheet: 19.05%    Coil/Unstructured: 43.81%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MALHYCSLHTRLFSRRGQRWVTFSPATIHEIRGYYDLLCSTNRDASFLHVIEVSCDQCAATGQTIARSQARPNACGESequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
31.2%68.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Switchgrass Rhizosphere
Soil
Grasslands Soil
Soil
Tropical Forest Soil
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
22.9%3.7%21.1%7.3%29.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J11758_1291301213300000789SoilMALHYCSRHKRLFSRSCHRWVTFSQATIDEIHGYYELLRSTNKDASWLHVIELSCDQCAETFRTIAR
JGI10216J12902_10391159033300000956SoilMALHYCSLHQRLFSRRCQRWVCFSPATIHEIRGYYALLCSTHTDAAFLHVIELSCDHCAASWRTLAQSNAEDGVCEA*
JGI10216J12902_11309767913300000956SoilMALHYCSRHKRLFSRRGDRWVSFSQATIDEIRGYYELLRSTKKDAAFLHVLELSCDWCAATLQTLARSNAEDGVCDI*
Ga0066397_1015796613300004281Tropical Forest SoilRRYQRWVTFSQATMNDIRGYYDLLCSTKKDASFLHVIELACDQCAATFQTIARSKARQDGSGE*
Ga0066395_1085159713300004633Tropical Forest SoilMALYSCSLPTRLFSRRWQRWVTFSPATMQDIRGYDNLLRSTHKDASLLHVIERACDQCAVTLQTIARSQARQDAPGE*
Ga0066680_1015965733300005174SoilMALHSCRRHQRLFSRRCQRWVGFSPATIQAMRGSDALLCSTHKDASFLHVIELSCDHYAASLQTRAQSHTEDGVGDA
Ga0066680_1031079113300005174SoilMALHYCSLHQRLFSRRCQRWVGFSPATITEIRGYYDLLCSTNRDTSFLHVIELSCDHCAASFRTRAQSHAEDEVREA*
Ga0066680_1037059913300005174SoilMALHYCSLHQRLFSRRCQRWVCFSPATIHAIRGYYALLCSTQKDASFLHVIELSCDHCAASFRTIAQSNAADGVGDA*
Ga0066679_1054770313300005176SoilMALHYCSLHQRLFSRRCQRWVGFSPATITEIRGYYDLLCSTNRDTSFLHVIELSCDHCAASFRTLAQSHAEDGGGDA*
Ga0066679_1075855823300005176SoilMALHYCSLHQRLFSRRCHRWVSFSQATIDAIRGYDALLRSTHKDVSFLHVMEWSCDQCATTWRTIARSQERTNGYWE*
Ga0066685_1018024823300005180SoilMALHYCSRHQRLFSRRCQRWVGFSPATITEIRGYYDLLCSTNRDTSFLHVIELSCDHCAASFRTRAQSHAEDEVREA*
Ga0066675_1012941413300005187SoilMALHYCSLHQRLFSRRCLRWVCFSPATIHAIRGYYALLCSTQKDASFLRVIELSCDHCPRPFRL*
Ga0065705_1032823223300005294Switchgrass RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATIHEIRGYYNLLCSANRDASFLHVIEVPCDQCTATLQTIARSTARHEGLGE*
Ga0065707_1011910423300005295Switchgrass RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATIHEIRGYYNLLCSANRDASFLHVIEVPCDQCAATLQTIARSTARHEGVGE*
Ga0066388_10189388413300005332Tropical Forest SoilMALHYCSLHARLFSRRYQRWVTFSQATMNDIRGYYDLLCSTKRDASFLHVIELACDQCAATFQTIARSKARQDGSGE*
Ga0066388_10208042413300005332Tropical Forest SoilMALYYCSLHTRLFSRRWQRWVPFSQATINEICGYYDLLRSTHKDASLLYVIAWACDQCAATLQTIARSQARQQESGE*
Ga0070689_10089897513300005340Switchgrass RhizosphereMALHYCSLHKRLFSRRCYGWVTFSQATIDEIRGYYELLCSINADASFLQVIEQSCDQCVVTFRTIARSQERHEGLSE*SEYPYGKEMC*
Ga0070668_10024433533300005347Switchgrass RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATIHEIRGYYNLLCSANRDASLLHVLEVPCDQCAATLQTIARSTARHEGFGE*
Ga0066689_1044813113300005447SoilMALHYCSLHQRLFSRRCQRWVGFSPATITEIRGYYDLLCSTNRDTSFLHVIELSCDHCAASFRTLAQSNAEDG
Ga0066692_1046862323300005555SoilMALHYCSLHQRLFSRRCQRWVGFSPATIQAMRGSDALLCSTHKDASFLHVIELSCDHYAASLQTRAQSHTEDGVGDA*
Ga0066699_1118827013300005561SoilMALHYCSLHTRLFRRRGQRWVTFSPATIHAIRGYDALLCSTKRDASFLHVIEVSCDQCAATWQTITRSQARPHACGE*
Ga0066705_1001322443300005569SoilMALHSCRRHQRLFSRRCQRWVGFSPATIQAMRGSDALLCSTHKDASFLHVIELSCDHYAASLQTRAQSHTEDGVGDA*
Ga0066702_1096055423300005575SoilMALHSCSRHQRLFSRRCQRWVGFSPATIQAMRGYDALLCSTHKDASFLHVIELSCDHCAASLQTRAQSHTEDGVGDA*
Ga0066708_1047962823300005576SoilMALHYCSLHQRLFSRRCHRWVSFSQATIDAIRGYDALLRSTNKDASFLHVMELSCDQCATTWRTIARSQEGPMDIGSDQEAPCTRN
Ga0066903_10043911123300005764Tropical Forest SoilMALYYCSLHTRLFSRRWQRWVPFSPATMHDIRGYYDLLRSTNTDASLLHVIELACDQCAATFQTIARSQARQDDSGE*
Ga0066903_10208430633300005764Tropical Forest SoilMALHYCSLHTRLFSRRWQRWVPFSPATMHDIRGYYDLLRSANTDASLLHVIELACDQCAATFQTIARSKARQEAAGE*
Ga0066903_10310175213300005764Tropical Forest SoilMALHYCSLHTRLFSRRYQQWVPFSPATMNEIRGYYNLLRSTHKDASFLHVIEWACDQCAVTLQTIARSQARQDASGK*
Ga0066903_10608904623300005764Tropical Forest SoilMALHYCSLHTRLFSRRWQRWVPFSPATMHDIRGYYDLLRSTNTDASFLHVIEWACDQCAATFQTIARSQARQQEAGE*
Ga0066696_1035208223300006032SoilMALHYCSLHQRLFSRRCQRWVGFSPATIHAIRGYYALLCSTQKDASFLHVIELSCDHYAASLQTRAQSNTEEGVGDV*
Ga0066656_1058695813300006034SoilMALHSCSLHQRLFSRRCQRWVGFSPATIHAIRGYYALLCSTQKDASFLHVIELSCDHCAASLRTIAQSNAEDGGGDA*
Ga0066652_10185907113300006046SoilMALHYCSLHQRLFSRRCQRWVCFSPATIHAIRGYYALLCSTQKDASFLHVIELSCDHCAASLRTLAQSHAADGGGDA*
Ga0066658_1002214343300006794SoilMALHSCSRHQRLFSRRCQRWVGFSPATIHAMRGYYALLCSTHKDASFLHVIELSCDHYAASLQTRAQSHTEDGVGDA*
Ga0066665_1025342723300006796SoilMALHYCSLHQRLFSRRCQRWVGFSPATITEIRGYYDLLCSTNRDTSFLHVIELSCDHCAASVRTRAQSHAEDGVGDA*
Ga0066665_1098751613300006796SoilMALHYCSLHQRLFSRRCRRWVGFSPATIQAIRGYDALLCSTHKDASFLHVIELSCDHCAASLQTRAQSHTEDGVGDA*
Ga0066659_1049972323300006797SoilMALHYCSLHQRLFSRRCQRWVGFSPATITEIRGYYDLLCSTNRDASFLHVIELSCDHCAASVRTRAQSHAEDGVGDA*
Ga0075428_10001940363300006844Populus RhizosphereMALHYCSRHKRLFSRSCHRWVTFSQATIDEIHGYYELLRSTNKDASWLHVIELSCDQCAETFRTIARSKVSNDQFWE*
Ga0075428_10004209353300006844Populus RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATITEIRGYYDLLCATNREASFLHVIEWSCDQCAATLQTLARSQARHEALGE*
Ga0075428_10006780233300006844Populus RhizosphereMALHYCSLHTRLFSRRGQRWVTFSPATIHEIRGYYDLLCSTNRDASFLHVIEVSCDQCAATGQTIARSQARPNACGE*
Ga0075428_10010907273300006844Populus RhizosphereMALHYCSLHKRLFSRRCHRWVSFSQATIDEIRGYYALLRSINKDASLLHVIELSCDQCAATFRTIARSKESNDRLWE*
Ga0075428_10024661323300006844Populus RhizosphereMALHYCSLHTRLFSRSGQRWVTFSQATITEIRGYYDLLCSTNREASFLHVLEVACDQCTATLQTIARSTARHEACGE*
Ga0075428_10062221223300006844Populus RhizosphereMALHYCSLHQRLFSRRCSRWVSFSQATIDEIRAYYALLRSAKKDASLLHVIELSCDQCATSLRTIARSMASSDSLWE*
Ga0075428_10098950333300006844Populus RhizosphereMALHYCSRHKRLFSRRGDRWVSFSQATIDEIRGYYELLRATKKDASFLHVIELSCDQCAATFRTVARLEAHHN*
Ga0075431_10030291143300006847Populus RhizosphereMALHYCSLHQRLFSRRCSRWVSFSQATIDEIRGYYELLRATKKDASFLHVIELSCDQCAATFRTVARLEAHHN*
Ga0075431_10213626713300006847Populus RhizosphereHYCSLHTRLFSRRWQRWVTFSPATITEIRGYYDLLCSTNREASFLHVLEVACDQCTATLQTIARSTARHEACGE*
Ga0075433_1035284223300006852Populus RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATITEIRGYYDLLCSTNREASFLHVIEWSCDQCAATLQTLARSQARHEALGE*
Ga0075433_1114841113300006852Populus RhizosphereMALHYCSRHKRLFSRRGDRWVSFSQATIDEIRGYYELLRSTKKDAAFLHVLELSCDHCAASLRPIAQSNAEDGVCEA*
Ga0075420_10008924623300006853Populus RhizosphereMALHYCSLHQRLFSRRCSRWVSFSQATIDEIRGYYELLRATKKDASFLHVIELSCDQCAATFRTVARIKACHDWLWE*
Ga0075424_10163087313300006904Populus RhizosphereSRRYQRWGTFSPATITEIRGYYDLLCATNREASFLHVIEWSCDQCAATLQTLARSQARHEALGE*
Ga0075424_10237344013300006904Populus RhizosphereMALHYCSRHKRLFSRSCHRWVTFSQATIDEIHGYYELLRSTNKDASWLHVIELSCDQCAETFRTIARSKVSNDQ
Ga0075419_1012826333300006969Populus RhizosphereMALHYCSLHTRLFSRRWQRWVTFSPATITEIRGYYDLLCATNREASFLHVIEWSCDQCAATLQTLARSQARHEALGE*
Ga0075435_10081244613300007076Populus RhizosphereMALHYCRRHQRLFSRPCQRWVYVAPATIQAMCGSYALLCATQTEASFLPVLELSCDHCAALLQPLARSNAADAWCKG*
Ga0066710_10395773313300009012Grasslands SoilMALHYCSLHQRLFSRRCQRWVGFSPATITEIRGYYDLLCSTNRDASFLHVIELSCDHCAASVRTRAQSHAEDGVGDA
Ga0099829_1016368113300009038Vadose Zone SoilMALHYCSLHQRLFSRRCQRWVCFSPATITEIRGYYDLLCSTNRDASFLHVIELSCDHCAESFRTIAQSDAEDGVCEA*
Ga0099828_1084988013300009089Vadose Zone SoilMALHYCRLHQRLFSRRCQRWVCFSPATIHAMRGSYALLCSTHKDASFLHVIELSCDHCAASLRTRAQSNTEDGVRDA*
Ga0099827_1005015043300009090Vadose Zone SoilMALHYCSLHTRLFSRRGQRWVTFSPATINEIRGYYDLLCSTNRDASFLQVIEVSCDQCAATLQTRARRTARHHAFGE*
Ga0099827_1076089923300009090Vadose Zone SoilMALHYCRLHQRLFSRRCQRWVCFSPATIHAMRGSYALLCSTHKDASFLHVIELSCDHCAASFRTIAQSNAEDRVGEA*
Ga0111539_1099565223300009094Populus RhizosphereMQLQKRREGYDMALHYCSLHTRLFSRSGQRWVTFSQATITEIRGYYDLLCSTNREASFLHVLEVACDQCTATLQTIAR
Ga0075418_1038726223300009100Populus RhizosphereMALHYCSLHQRLFSRRCSRWVSFSQATIDEIRAYYALLRSAKKDASLLHVIELSCDQCGTSLRTIARSMASSDSLWE*
Ga0066709_10117032413300009137Grasslands SoilMALHYCSLHQRLFSRRCQRWVGFSPATIHAIRGYYALLCSTQKDASFLHVIELSCDHCAASLRTLAQ
Ga0114129_1006385033300009147Populus RhizosphereMALHYCSLHKRLFSRRCYRWVTFSQATIDEIRGYYELLRSTHTNASFLQVIELPCDQCVATFRTIARSTASHDWLWE*
Ga0114129_1015534133300009147Populus RhizosphereMALHYCSRHQRLFSRRCQRWVGFSPATIHAIRGYYALLRAAQQDASLLHVLELSCDHCAASVWTRAQSNAEEGGVEV*
Ga0114129_1026636923300009147Populus RhizosphereMALHYCSLHTRLFSRRWQRWVTFSPATITEIRGYYDLLCSTNREASFLHVIELACDQCAATLQTIARSTARHEACGE*
Ga0114129_1043761933300009147Populus RhizosphereMALHYCSLHQRLFSRRCSRWVSFSQATIDEIRGYYALLCSAKKDASFLYVIERSCDQCAATLRTIARSKARHAWLWE*
Ga0114129_1101606943300009147Populus RhizosphereLHYCSLHQRLFSRRYSRWVSFSQATIDEIRGYYALLRATKKDASFLHVIELSCDQCAATLRTVARIKACHDWLWE*
Ga0114129_1303275913300009147Populus RhizosphereMALYYCSRHQRLFSRRGDRWVSFSQATMDEIRGYYDLLCSTNRDASFLQVIELSCDQCTAILQILAWSNAEEGLCEA*
Ga0111538_1330497723300009156Populus RhizosphereFSRRYQRWVTFSPATITEIRGYYDLLCATNREASFLHVIEWSCDQCAATLQTLARSQARHEALGE*
Ga0075423_1200572013300009162Populus RhizosphereMALHYCSLHKRLFSRRCYRWVTFSQATIDEIRGYYELLRSTHTNASFLQVIELPCDQCVATFRTI
Ga0105249_1022407823300009553Switchgrass RhizosphereMALHYCSLHKRLFSRRCYGWVTFSQATIDEIRGYYELLCSINADASFLQVIEQSCDQCVVTFRTIARSQERHEGLSE*
Ga0126374_1049471633300009792Tropical Forest SoilMALYSCSLHTRLFSRRWQRWVPFSQATINEICGYYDPLRSTHKDASLLYVIAWACDQCAATLQTIARSQARQQESGE*
Ga0126372_1003009813300010360Tropical Forest SoilMALYYCSLHTRLFSRRWQRWVPFSQATINEICGYSDLLRSTHKDASLLYVIAWACDQCAATLQTIARSQARQQESGE*
Ga0126379_1005276523300010366Tropical Forest SoilMALYYCSLHTRLFSRRWQRWVPFSQATINEICGYYDLLRSTHTDASLLYVIAWACDQCAATLQTIARSQARQQESGE*
Ga0137383_1022467923300012199Vadose Zone SoilMALHYCSRHQRLFSRRCQRWVGFSPATITEIRGYYDLLCSTNRDASFLHVIELSCDHCAASVRTRAQSHAEDGVGDA*
Ga0137383_1025964513300012199Vadose Zone SoilMALHSCSRHQRLFSRRCQRWVCFSPATIHAMRGYDALLCSTTTDAAFLHVLELSCDHCAASVRTRAQSNAEEGVCEA*
Ga0137383_1053581423300012199Vadose Zone SoilMALHYCSLHQRLFSRRCQRWVFISPATITEIRGYYDLLCSTNRDASFLHVIELSCDHCAASLRTRAQSHAEDGVGEA*
Ga0137365_1023614423300012201Vadose Zone SoilMALHYCSLHQRLFSRRCQRWVGFSPATITEIRGYYDLLCSSNRDASFLHVIELSCDHCAASLRTIAQSNAEDGGGDA*
Ga0137381_1020398433300012207Vadose Zone SoilMALHYCSLHQRLFSRRCQRWVGFSPATIQAMRGYYALLCSTQKDASFLHVIELSCDHCAASFRTIAQSNAEDRVGEA*
Ga0137381_1174705923300012207Vadose Zone SoilMALHYCSLHQRLFSRRCHRWVSFSQATIDAIRGYYALLRSTNKDASFLHVIELSCDQCAATLRTHS
Ga0137379_1170785813300012209Vadose Zone SoilMALHSCSRHQRLFSRRCQRWVGFSPATIHAMRGYYTLLCSTQKDASFLYVIELPCDYCSASVRTIAQSNAEDG
Ga0137378_1027295113300012210Vadose Zone SoilMALHYCSLHTRLFSRRGQRWVTFSPATIHAIRGYYDLLCSTNRDAPFLHVIEVSCDQCAATWQTITRSQARPHACGE*
Ga0137377_1097397623300012211Vadose Zone SoilMALHSCSRHQRLFSRRCQRWVGFSPATIQAMRGYDALLCSTHKDTSFLHVIELSCDHYAASLQTRAQSHTEDGVGDA*
Ga0137387_1036838713300012349Vadose Zone SoilMALHYCSRHQRLFSRRCQRWVFFSPATIHAIRGYYALLCSTQKDASFLHVIELSCDHCAASFRTIAQSNAEDRVGEA*
Ga0137387_1047968323300012349Vadose Zone SoilMALHYCRLHQRLFSRRCQRWVCFSPATIHAMRGYDALLCSTTTDAAFLHVLELSCDHCAASVRTRAQSNAEEGVCEA*
Ga0137386_1044186013300012351Vadose Zone SoilMALHSCSLHQRLFSRRCQRWVGFSPATIHAIRGYYALLCSTKKDASFLHVIELSCGHCAASLRTIAQSHAEDGVRDA*
Ga0137384_1012328233300012357Vadose Zone SoilMALHYCSLHTRLFRRRGQRWVTFSPATINEIRGYYDLLCSTNRDASFLQVIEVSCDQCAATLQ
Ga0137384_1037622223300012357Vadose Zone SoilMALHYCSLHQRLFSRRCQRWVGFSPATIQAMRGYYALLCSTQKDASFLHVIELSCDHCAASLRTRAQSHAADGVGDA*
Ga0137384_1095824723300012357Vadose Zone SoilMALHYCSLHQRLFSRRCQRWVFFSPATIQEIRRYDALLCSTNPDAAFLHVLELSCDHCAASVRTRAQSNAEEGVCEA*
Ga0137361_1002823863300012362Vadose Zone SoilMALHYCSLHTRLFSRRGQRWVTFSPATINEIRGYYDLLCSTKRDASFLHVIEVSCDQCAATVQTRARSTARHHAFGE*
Ga0137394_1123408213300012922Vadose Zone SoilMALHYCSLHQRLFSRRSQRWVCFSPATIHAIRGYYALLCSTQKDASFLHVIELSCDHCAASFQTIAQSHAEDGVREA*
Ga0164299_1138567423300012958SoilMALHYCSLHTRLCSRRYQRWVTFSPATIHEIRGYYDLLCSANRDVSFLHVIEVPCDQCTATLQPIAAKHSTS*
Ga0126369_1339173013300012971Tropical Forest SoilMALYSCSLPTRLFSRRWQRWVPFSQATMHDICGYSDLLRSTHKDASLLYVIAWACDQCAATLQTIARSQARQQESGE*
Ga0163162_1110520823300013306Switchgrass RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATIHEIRGYYNLLCSAKRDASFLHVIEVPCDQCAATVQTIARSTARHEGVGE*
Ga0137418_1001410783300015241Vadose Zone SoilMALHYCSLHTRLFSRRGQRWVTFSPATINEIRGYYDLLCSTNRNASFLHVIEVSCDQCAATLQTRARSTARHHAFGE*
Ga0134072_1035383913300015357Grasslands SoilMALHSCSRHQRLFSRRCQRWVGFSPATIQAMRGYDALLCSTHKDTSFLHVIELSCDHCAASFQTIAQSNTEDGVGDA*
Ga0132255_10413429313300015374Arabidopsis RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATIHDIRGYYDLLCAAKREAALLHVLEVPCDQCAATLQTIARSTARHEGFGE*
Ga0182033_1103638023300016319SoilRLFSRSCYRWVSFSQATIDEIRGYYALLRSTKKDASLLHVIELSCDQCAVTFRTIARSKARNDWLWE
Ga0207706_1014002633300025933Corn RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATIHEIRGYYNLLCSANRDASFLHVIEVPCDQCAATLQTIARSTARHEGVGE
Ga0207689_1148799913300025942Miscanthus RhizosphereMTLHYCSLHTRLCSQRGQRWVTFSQATIDEIRGYYELLCSINADASFLQVIEQSCDQCVVTFRTI
Ga0207668_1022648123300025972Switchgrass RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATIHEIRGYYNLLCSANRDASLLHVLEVPCDQCAATLQTIARSTARHEGFGE
Ga0207675_10045107813300026118Switchgrass RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATIHEIRGYYNLLCSANRDASFLHVIEVPCDQCAATVQTIARSTARHEGVGE
Ga0209180_1000850783300027846Vadose Zone SoilMALHYCSLHQRLFSRRCQRWVCFSPATITEIRGYYDLLCSTNRDASFLHVIELSCDHCAESFRTIAQSDAEDGVCEA
Ga0209814_1028678913300027873Populus RhizosphereGMALHYCSLHTRLFSRRYQRWVTFSPATITEIRGYYDLLCATNREASFLHVIEWSCDQCAATLQTLARSQARHEALGE
Ga0209283_1012768413300027875Vadose Zone SoilMALHYCSLHTRLFSRRGQRWVTFSPATIHEIRGYYDLLCSTNRDASFLQVIEVSCDQCAATLQTIARSTARHHAFRE
Ga0209481_1001999363300027880Populus RhizosphereMALHYCSRHKRLFSRSCHRWVTFSQATIDEIHGYYELLRSTNKDASWLHVIELSCDQCAETFRTIARSKVSNDQFWE
Ga0209481_1017699123300027880Populus RhizosphereMALHYCSLHTRLFSRRYQRWVTFSPATITEIRGYYDLLCATNREASFLHVIEWSCDQCAATLQTLARSQARHEALGE
Ga0209488_1024182123300027903Vadose Zone SoilMALHYCSLHTRLFSRRGQRWVTFSPATINEIRGYYDLLCSTNRDASFLQVIEVSCDQCAATLQTRARRTARHHAFGE
Ga0209382_1009704233300027909Populus RhizosphereMALHYCSLHTRLFSRRGQRWVTFSPATIHEIRGYYDLLCSTNRDASFLHVIEVSCDQCAATGQTIARSQARPNACGE
Ga0209382_1028138523300027909Populus RhizosphereMALHYCSLHQRLFSRRCSRWVSFSQATIDEIRGYYELLRATKKDASFLHVIELSCDQCAATFRTVARLEAHHN
Ga0209382_1073731723300027909Populus RhizosphereMALHYCSLHTRLFSRSGQRWVTFSQATITEIRGYYDLLCSTNREASFLHVLEVACDQCTATLQTIARSTARHEACGE
Ga0306920_10345884713300032261SoilMALYSCSLHTRLFRRRWQRWVTFSPATMHDIRGYYDLLRSTNKDASLLHVIAWACDQCAATLQTIARSQARQDDSGE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.