Metagenome / Metatranscriptome Family F088601

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088601
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	140 residues
Representative Sequence	MRGMVVLLVLIVAQVAPSHTFAANSTQRVVSQQGISGGPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNGTTAIYAVPEDRADRMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK
Number of Associated Samples	90
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.90 %
% of genes near scaffold ends (potentially truncated)	35.78 %
% of genes from short scaffolds (< 2000 bps)	66.97 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.165 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.110 % of family members)
Environment Ontology (ENVO)	Unclassified (36.697 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.367 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.14% β-sheet: 40.28% Coil/Unstructured: 39.58%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13646	HEAT_2	9.17
PF00072	Response_reg	1.83
PF04392	ABC_sub_bind	1.83
PF00296	Bac_luciferase	1.83
PF00589	Phage_integrase	1.83
PF03972	MmgE_PrpD	0.92
PF13673	Acetyltransf_10	0.92
PF00365	PFK	0.92
PF08309	LVIVD	0.92
PF01842	ACT	0.92
PF14437	MafB19-deam	0.92
PF00691	OmpA	0.92
PF00383	dCMP_cyt_deam_1	0.92
PF02518	HATPase_c	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.83
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.92
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.92
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.17 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.17 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.17 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	65.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.83 %
Unclassified	root	N/A	1.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	65.14 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.83 %
Unclassified	root	N/A	1.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	65.14 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.83 %
Unclassified	root	N/A	1.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	59.63 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.83 %
Unclassified	root	N/A	1.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	59.63 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	1.83 %
Unclassified	root	N/A	1.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	59.63 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	1.83 %
Unclassified	root	N/A	1.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10052293	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1315	Open in IMG/M
3300002560\|JGI25383J37093_10182677	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300002562\|JGI25382J37095_10006125	All Organisms → cellular organisms → Bacteria	4300	Open in IMG/M
3300002562\|JGI25382J37095_10223164	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300002908\|JGI25382J43887_10053563	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2192	Open in IMG/M
3300005174\|Ga0066680_10090042	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1863	Open in IMG/M
3300005180\|Ga0066685_10448753	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005536\|Ga0070697_101015982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300005552\|Ga0066701_10085522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1817	Open in IMG/M
3300005556\|Ga0066707_10087620	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1890	Open in IMG/M
3300005557\|Ga0066704_10222997	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1278	Open in IMG/M
3300005558\|Ga0066698_10323865	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1067	Open in IMG/M
3300006034\|Ga0066656_10103748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1731	Open in IMG/M
3300006796\|Ga0066665_10339615	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1221	Open in IMG/M
3300007255\|Ga0099791_10192002	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300007255\|Ga0099791_10410414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300007265\|Ga0099794_10135903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1243	Open in IMG/M
3300009012\|Ga0066710_100658776	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1593	Open in IMG/M
3300009038\|Ga0099829_10106110	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2192	Open in IMG/M
3300009088\|Ga0099830_10035984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3390	Open in IMG/M
3300009090\|Ga0099827_10000198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	24057	Open in IMG/M
3300009137\|Ga0066709_104212184	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300009814\|Ga0105082_1122475	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300009815\|Ga0105070_1037519	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	879	Open in IMG/M
3300009816\|Ga0105076_1035893	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	881	Open in IMG/M
3300009818\|Ga0105072_1021269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1184	Open in IMG/M
3300009819\|Ga0105087_1026231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	865	Open in IMG/M
3300010304\|Ga0134088_10102041	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1350	Open in IMG/M
3300010304\|Ga0134088_10204218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	946	Open in IMG/M
3300010336\|Ga0134071_10013946	All Organisms → cellular organisms → Bacteria	3291	Open in IMG/M
3300010336\|Ga0134071_10667303	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300011271\|Ga0137393_10058166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3045	Open in IMG/M
3300012202\|Ga0137363_10062188	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2717	Open in IMG/M
3300012203\|Ga0137399_10318576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1287	Open in IMG/M
3300012204\|Ga0137374_10170031	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300012205\|Ga0137362_10015166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5790	Open in IMG/M
3300012206\|Ga0137380_10218441	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1724	Open in IMG/M
3300012207\|Ga0137381_10970727	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	733	Open in IMG/M
3300012349\|Ga0137387_10419486	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	971	Open in IMG/M
3300012349\|Ga0137387_10576376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	816	Open in IMG/M
3300012351\|Ga0137386_10542402	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300012353\|Ga0137367_10028751	All Organisms → cellular organisms → Bacteria	4299	Open in IMG/M
3300012355\|Ga0137369_10032343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4774	Open in IMG/M
3300012361\|Ga0137360_10238902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1487	Open in IMG/M
3300012362\|Ga0137361_10087255	All Organisms → cellular organisms → Bacteria	2682	Open in IMG/M
3300012363\|Ga0137390_10217992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1895	Open in IMG/M
3300012685\|Ga0137397_10020268	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4667	Open in IMG/M
3300012929\|Ga0137404_10058281	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2987	Open in IMG/M
3300012929\|Ga0137404_11596478	Not Available	605	Open in IMG/M
3300012930\|Ga0137407_10079908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2752	Open in IMG/M
3300012944\|Ga0137410_10203424	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300012944\|Ga0137410_10561674	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300012976\|Ga0134076_10357404	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300015241\|Ga0137418_10603289	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	861	Open in IMG/M
3300015245\|Ga0137409_10263825	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1525	Open in IMG/M
3300015264\|Ga0137403_10001147	All Organisms → cellular organisms → Bacteria	33457	Open in IMG/M
3300015358\|Ga0134089_10385654	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300015358\|Ga0134089_10450213	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300017656\|Ga0134112_10044273	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300017656\|Ga0134112_10239074	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300017997\|Ga0184610_1023672	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1675	Open in IMG/M
3300017997\|Ga0184610_1259473	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300018028\|Ga0184608_10062081	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1497	Open in IMG/M
3300018031\|Ga0184634_10001279	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	7351	Open in IMG/M
3300018053\|Ga0184626_10023266	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300018054\|Ga0184621_10156286	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	821	Open in IMG/M
3300018056\|Ga0184623_10312256	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300018063\|Ga0184637_10062606	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2275	Open in IMG/M
3300018074\|Ga0184640_10031406	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300018076\|Ga0184609_10199340	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	932	Open in IMG/M
3300018077\|Ga0184633_10000588	All Organisms → cellular organisms → Bacteria	13574	Open in IMG/M
3300018082\|Ga0184639_10020590	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3287	Open in IMG/M
3300018431\|Ga0066655_10206584	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1219	Open in IMG/M
3300018433\|Ga0066667_10214273	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1428	Open in IMG/M
3300018468\|Ga0066662_10076342	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2270	Open in IMG/M
3300019259\|Ga0184646_1056944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	1367	Open in IMG/M
3300021081\|Ga0210379_10046962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	1710	Open in IMG/M
3300026285\|Ga0209438_1079253	Not Available	1056	Open in IMG/M
3300026296\|Ga0209235_1038820	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2389	Open in IMG/M
3300026297\|Ga0209237_1011620	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5225	Open in IMG/M
3300026297\|Ga0209237_1036198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2632	Open in IMG/M
3300026297\|Ga0209237_1099617	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1278	Open in IMG/M
3300026313\|Ga0209761_1062761	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2014	Open in IMG/M
3300026313\|Ga0209761_1104925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1404	Open in IMG/M
3300026313\|Ga0209761_1270730	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	621	Open in IMG/M
3300026332\|Ga0209803_1122430	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1038	Open in IMG/M
3300026351\|Ga0257170_1008210	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1265	Open in IMG/M
3300026480\|Ga0257177_1019619	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	953	Open in IMG/M
3300026537\|Ga0209157_1003553	All Organisms → cellular organisms → Bacteria	11936	Open in IMG/M
3300026537\|Ga0209157_1379798	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300026538\|Ga0209056_10456844	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300026540\|Ga0209376_1273339	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300027169\|Ga0209897_1035037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	722	Open in IMG/M
3300027490\|Ga0209899_1010814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2086	Open in IMG/M
3300027561\|Ga0209887_1004444	All Organisms → cellular organisms → Bacteria	4009	Open in IMG/M
3300027577\|Ga0209874_1013885	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2343	Open in IMG/M
3300027655\|Ga0209388_1053665	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1163	Open in IMG/M
3300027655\|Ga0209388_1175299	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300027671\|Ga0209588_1215581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	595	Open in IMG/M
3300027846\|Ga0209180_10009652	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4958	Open in IMG/M
3300027882\|Ga0209590_10000552	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12534	Open in IMG/M
3300027949\|Ga0209860_1060455	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300027952\|Ga0209889_1025750	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1308	Open in IMG/M
3300027952\|Ga0209889_1043281	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	954	Open in IMG/M
3300028673\|Ga0257175_1001078	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2816	Open in IMG/M
3300028878\|Ga0307278_10104297	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1275	Open in IMG/M
3300031720\|Ga0307469_10081268	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300031720\|Ga0307469_10678347	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300033811\|Ga0364924_001333	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4034	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.16%
Aquatic	Environmental → Aquatic	12.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.24%
Sediment	Environmental → Aquatic → Sediment	11.01%
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Floodplain	Environmental → Terrestrial → Floodplain	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.01%
Sand	Environmental → Terrestrial → Soil → Sand	11.01%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.83%
Loam	Environmental → Terrestrial → Soil → Loam	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.01%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	11.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	11.01%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	11.01%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.75%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_100522933	3300002560	Grasslands Soil	QQGISGGPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNGTTAIYAVPEDRADRMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK*
JGI25383J37093_101826771	3300002560	Grasslands Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPENRAGQMLRAAECRLLIPGQDIALARQQLRAWPSPPQGASHRR
JGI25382J37095_100061257	3300002562	Grasslands Soil	MRGMVVLLVLIALIVAQGAPSYTFAANSGGPRVVLSINSKTTQRQVHLVXHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWVSPSQGAAHQREGQK*
JGI25382J37095_102231641	3300002562	Grasslands Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPENRAGQMLRAAECRLLIPGQDIALARQQLRAWPSQGASGR
JGI25382J43887_100535635	3300002908	Grasslands Soil	MRGMVVLLVLIALIVAQGAPSYTFAANSGGPRVVLSINSKTTQRQVHLVDHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK*
Ga0066680_100900424	3300005174	Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPENRAGQMLRAAECRLLIPGQDIALARQQLRAWPSPPQGASHRREARAVRQSQGVK*
Ga0066685_104487532	3300005180	Soil	MRGMVVLLVLIVAQVAPPHTFAANSTPRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGHDIALARQQLRAWASPSLGAAH*
Ga0070697_1010159821	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	TIVCLSACLWESAMRGLAVLFVLIAAQVAPSHTFAANSTQQVVPRKGISGGPRVVLRIDPKTTERQVQLMGQGISTYPTVDITCDGNRWTLPLTRSEFAKTRTTATYAVPEDRAGRMLKAVACRLLVPGHDIALARQQLRAWASPSHGAAHQQEARKQ*
Ga0066701_100855223	3300005552	Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPENRAGQMLGAAECRLLIPGQDIALARQQLRAWPSPPQGASHRREARAVRQSQGVK*
Ga0066707_100876201	3300005556	Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPENRAGQMLRAAECRLLIPGQDIALARQQLRAWPSPPQGAAHRREARAVRQSQGVK*
Ga0066704_102229972	3300005557	Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPEHRAGQMLRAAECRLLIPGQDIALARQQLRAWPSPPQGASHRREARAVRQSQGVK*
Ga0066698_103238652	3300005558	Soil	EVPATLIGTIVCLSARLWEYAMRGMVVLLVLIVAQVAPSHTFAANSTQRVVSQQGISGGPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNGTTAIYAVPEDRADRMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK*
Ga0066656_101037485	3300006034	Soil	MRGMVVLLVLIVAQVAPPHTFAANSTPRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGHDIALARQQLRAWASP
Ga0066665_103396152	3300006796	Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPENRAGQMLGAAECRLLIPGQDIALARQQLRAWPSPSQGAAHRREARAVRQSQGVK*
Ga0099791_101920022	3300007255	Vadose Zone Soil	MRGMVVVLVLAVGQVAPSYTFAANSTQLVVSQDGISRGPRVVLSINPKTTQREIRLVGQGISAYPTVDITCDGKKWTLPLTRSEFIKNRTTAIYAVPEDHARRMLKAVECRLLAPSQDIALARQQLRAWGSPSPGTAHRPEAREQTHRLTASSSEPTPPRPVAQVTRQSVDVRPGVPPESAWTCPAPQPIKGNFT
Ga0099791_104104142	3300007255	Vadose Zone Soil	MRGMVVLLVLIVAQGAPSHTFAENSGGPRVVLSINSKTAQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGQDIALARQQLRAWASPSQGAAHQREARK*
Ga0099794_101359032	3300007265	Vadose Zone Soil	MRGMVVLLVLIALIVAQGAPSHTFAANSGGPRVVLSINSKTAQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK*
Ga0066710_1006587763	3300009012	Grasslands Soil	MRGMVVLLVLIVAQVAPSHTFAANSTQRVVSQQGISGGPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNGTTAIYAVPEDRADRMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK
Ga0099829_101061102	3300009038	Vadose Zone Soil	MVVLLVLIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREGQK*
Ga0099830_100359843	3300009088	Vadose Zone Soil	MVVLLVLIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDITCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREGQK*
Ga0099827_1000019814	3300009090	Vadose Zone Soil	MVVLLVLIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDITCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWVSPSQGAAHQREGQK*
Ga0066709_1042121841	3300009137	Grasslands Soil	MVVLLVLIVAQVAPSHTFAANSTQRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGHDIALARQQLRAWASPSLGAAH*
Ga0105082_11224751	3300009814	Groundwater Sand	MVVLLVLIVAQVAPSNTFAANSTQHVGSQRGISGRPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYVVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPSQGAAHQQEAPKQKRGLKA
Ga0105070_10375191	3300009815	Groundwater Sand	MVVLLVLIVAQVAPSYTFAANSTQQVSQRGISGRPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNRTMATYAVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPSQGTAHQQEAPKQKRGLKAG*
Ga0105076_10358931	3300009816	Groundwater Sand	MVVVLVLIVAQVAPSHTFAANSTPQVVSQQGNSGGPRVLLSINSKTTQRQVHLVGHGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTMATYAVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPSQGAAHQQEAPKQKRGLKAG*
Ga0105072_10212692	3300009818	Groundwater Sand	MVVLLVLIVAQVAPSHTFAANSTQQVVSQQGISGGPRVVLSINSKTTQRQVHLVGHGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPPQGTTHQQEAPKQKRGLKAG*
Ga0105087_10262311	3300009819	Groundwater Sand	MVVVLVLIVAQVAPSHTFAANSTQRVVSRQGISGGPRVVLSINSKTTQRQVHLVGHGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTMATYAVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPSQGAAHQQEAPKQKRGLKAG*
Ga0134088_101020412	3300010304	Grasslands Soil	RVVSQQGISGGPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNGTTAIYAVPEDRADRMLKAVECRVLIPGRDIALARQQLRAWASPSPGAAHQREARK*
Ga0134088_102042182	3300010304	Grasslands Soil	VAPPHTFAANSTPRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGHDIALARQQLRAWASPSLGAAH*
Ga0134071_100139464	3300010336	Grasslands Soil	MVVLLVLIVAQVAPPHTFAANSTPRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGHDIALARQQLRAWASPSLGAAH*
Ga0134071_106673031	3300010336	Grasslands Soil	FAANSTQQVVPRKGISGGPRVVLRFDPKTTERQVQLMGQGISTYPTVDITCDGNRWTLPLTRSEFAKTRTTATYAVPEDRAGRMLKAVACRLLVPGHDIALARQQLRAWASPSHGAAHQQEARKQ*
Ga0137393_100581664	3300011271	Vadose Zone Soil	MVVLLVLIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDITCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGQDIALARQQLRAWASPSQGAAHQREGQK*
Ga0137363_100621883	3300012202	Vadose Zone Soil	MVVLLVPIALIVAQGAPSHTFAANSGGPRVVLSINSKTAQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREGQK*
Ga0137399_103185763	3300012203	Vadose Zone Soil	MVILLVLVVGQTQPVISQERISGSPRVVLSINPKTTQRQVQLVGQGISAYPTVDFTCDGARWTLPLTRSEATKNRTTVTYAVPEKRAGQMLRAAECRLLIPGQDIALARQQLRAWPSPSQGAAHQREARAVRQSQGVK*
Ga0137374_101700312	3300012204	Vadose Zone Soil	MVVLLVLIVAQVAPSHTFAANSTRPVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGYDIALARQQLRAWASPPQGAAHQPEARK*
Ga0137362_100151667	3300012205	Vadose Zone Soil	MVVLLVPIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWVSPSQGAAHQREGQK*
Ga0137380_102184413	3300012206	Vadose Zone Soil	MVVLLVPIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPENRAGQMLRAAECRLLIPGQDIALARQQLRAWPSPSQGAAHQREARAVRQSQGVK*
Ga0137381_109707271	3300012207	Vadose Zone Soil	MVVLLVLIVAQVAPPHTFAANSTPRVVSQQGISGRPRVVLGINSTTTQRQVHLVGHGAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGQDIALARQQLRAWASPSQGAAHQREARK*
Ga0137387_104194862	3300012349	Vadose Zone Soil	MVVLLVLVVAQVAPSHTFAANSTQQVVSRQGISGRPRVVLGINSTTTQRQVHLVGHGAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGQDIALARQQLRAWASPSQGAAHQREARK*
Ga0137387_105763761	3300012349	Vadose Zone Soil	MVVLLVLIVAQVAPPHTFAANSTPRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTTTYAVPEDRAERMLKAVECRLLVPGHDIALARQQLRAWASPSLGAAH*
Ga0137386_105424022	3300012351	Vadose Zone Soil	MRGMVVLLVLVVAQVAPSHTSAANSTQQVVSRQGISGRPRVVLSINSTTTQRQVHLVGHGAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGQDIALARQKLRAWASPS
Ga0137367_100287513	3300012353	Vadose Zone Soil	MVVLLVLIVAQVAPSHTFAANSTRPVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGYDIALARQQLRAWASPPQGATHQPEARK*
Ga0137369_100323431	3300012355	Vadose Zone Soil	MVVLLVLIVAQVAPSHTFAASSTRPAVSQQRISGRPRVVLSINSKTTQRQVHLVGGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGYDIALARQQLRAWASPPQGA
Ga0137360_102389022	3300012361	Vadose Zone Soil	MVVLLVLIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWVSPSQGAAHQREGQK*
Ga0137361_100872556	3300012362	Vadose Zone Soil	MVVLLVPIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREGQK*
Ga0137390_102179921	3300012363	Vadose Zone Soil	LIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREGQK*
Ga0137397_100202683	3300012685	Vadose Zone Soil	MVALLVLSVAQIDPSHTFAATAAQQGVNQERISGGPRVVLSTNPKTAKRQVQLVGQGISAYPTVDITCDGKRWTFPLTRSEFTKNRTTATYAVPDDRAGRMLKAVECRLLVPGQEIALARRQLRAWAGPSQGAAHRQEAREQKPATPSPVSQVAR*
Ga0137404_100582816	3300012929	Vadose Zone Soil	MVALLVLSVAQIDPSHTFAATAAQQGVSQERISGGPRVVLSTNPKTAKRQVQLVGQGISAYPTVDITCDGKRWTFPLTRSEFTKNRTTATYAVPDDRAGRMLKAVECRLLVPGREIALARRQLRAWAGPSQGAAHRQEAREQKPATPSPVSQVAR*
Ga0137404_115964781	3300012929	Vadose Zone Soil	MRSVVALLVLAAAQGAPSHTMAANATQQPVRQEGTSGGPQVVLSTDRKTTQRQVQLVGQGVSAYPTVDITCDGKKRTFPLMRSEFIKNRTTAIYAVPEDHARRMLRAVECRVLTPSQDIPLARQQLRAWASPPPGTAHGLAAREQTHRVT
Ga0137407_100799085	3300012930	Vadose Zone Soil	MVALLVLSVAQIDPSHTFAATAAQQGVSQERISGGPRVVLSTNPNTAKRQVQLVGQGISAYPTVDITCDGKRWTFPLTRSEFTKNRTTATYAVPDDRAGRMLKAVECRLLVPGREIALARRQLRAWAGPSQGAAHRQEAREQKPATPSPVPQVAR*
Ga0137410_102034242	3300012944	Vadose Zone Soil	MRSMLALLVLAAAQGAPSHTIAASATQQPVRQEGPSGGPQVVLSTDRKTTQRQVQLVGQGVSAYPTVDITCDGKKRTFPLTRSEFIKNRTTAIYAVPEDHARRMLRAVECRVLTPSQDIPLARQQLRAWASPPPGTAHGPE
Ga0137410_105616742	3300012944	Vadose Zone Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPENRAGQMLRAAECRLLIPGQDIALGRQQRRAWPSPSQGAAHQREARAVRQSQGVK*
Ga0134076_103574041	3300012976	Grasslands Soil	RVVSQQGISGGPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNGTTAIYAVPEDRADRMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK*
Ga0137418_106032892	3300015241	Vadose Zone Soil	MVALLVLSVAQIDPSHTFAATAAQQGVSQERISGGPRVVLSTNPKTAKRQVQLVGQGISAYPTVDITCDGKRWTFPLTRSEFTKNRTTATYAVPDDRAGRMLKAVECRLLVPGQEIALARRQLRAWAGPSQGAAHRQ
Ga0137409_102638252	3300015245	Vadose Zone Soil	MVVLLVLVVAQVAPSHTFAANSTQQVVSRHGISGRPRVVLGINSTTTQRQVHLVGHGVYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGQDIALARQQLRAWASPSQGAAHQREARK*
Ga0137403_1000114724	3300015264	Vadose Zone Soil	MVALLVLSVAQIDPSHTFAATAAQQGVSQERISGGPRVVLSTNPKTAKRQVQLVGQGISAYPTVDITCDGKRWTFPLTRSEFTKNRTTATYAVPDDRAGRMLKAVECRLLVPGQEIALARRQLRAWAGPSQGAAHRQEAREQKPATPSPVSQVAR*
Ga0134089_103856541	3300015358	Grasslands Soil	PMRGLAVLFFLIAAQVAPSHTFAANLTQQVVPRKGISGGPRVVLRIDPKTTERQVQLMGQGISTYPTVDITCDGNRWTLPLTRSEFAKTRTTATYAVPEDRAGRMLKAVACRLLVPGHDIALARQQLRAWASPSHGAAHQQEARKQ*
Ga0134089_104502131	3300015358	Grasslands Soil	MRGMVVLLVLIVAQVAPPHTFAANSTPRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAGRMLKAVECRLLIPGQDIAMARQQLRAWASPSQGEALQREARKQKPGLRADSSTTAPSQSVAQTVSQ
Ga0134112_100442731	3300017656	Grasslands Soil	TLIGTIVCLSARLRESAMRGMVVLLVLIVAQVAPPHTFAANSTPRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGHDIALARQQLRAWASPSLGAAH
Ga0134112_102390741	3300017656	Grasslands Soil	SSATLIGTIVCLSACLWESPMRGLAVLFFLIAAQVAPSHTFAANLTQQVVPRKGISGGPRVVLRIDPKTTERQVQLMGQGISTYPTVDITCDGNRWTLPLTRSEFAKTRTTATYAVPEDRAGRMLKAVACRLLVPGHDIALARQQLRAWASPSHGAAHQQEARKQ
Ga0184610_10236721	3300017997	Groundwater Sediment	MRGLVVLLVLIVAQVAPVHMFAANSTQQVVSQQGISGRSRVVLSSNSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRLEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGQDIALARQQLRAWASPSQGAAHQREARK
Ga0184610_12594731	3300017997	Groundwater Sediment	MRGLVVLLVLIVAQVAPFHTFAANSTQQVVSQQGISGRPRVVLSSNSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRLEFAKNRTTATYAVPEDRAERMLKAVECRVLVPGQDIALARQQLRAWASP
Ga0184608_100620813	3300018028	Groundwater Sediment	MRGMVVLLVLVVAQVAPSHTFAANSTQQVVSRQGISGRPRVVLGINSTTTQRQVHLVGHGAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGQDIALARQQLRAWASPSQGAAHQREARK
Ga0184634_100012799	3300018031	Groundwater Sediment	MRGLVVLLVLIVAQVAPVHMFAANSTQQVVSQQGISGRSRVVLSSNSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRLEFAKNRTTATYAVPEDRAERMLKAVECRVLVPGQDIALARQQLRAWASPSQGAAHQREARK
Ga0184626_100232665	3300018053	Groundwater Sediment	MRGLVVLLVLIVAQVAPVHMFAANSTQQVVSQQGISGRSRVVLSSNSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRLEFAKNRTTATYAVPEDRAERMLKAVECRVLVPGQDIALARQQLRAWASPFQGAAHQREARK
Ga0184621_101562862	3300018054	Groundwater Sediment	MRGMVVLLVLVVAQVAPSYTFAANSTPQVVSRQGISGRPRVVLGINSTTTQRQVHLVGHGAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGQVIALARQQLRAWASPSQGAAHQREARK
Ga0184623_103122562	3300018056	Groundwater Sediment	MRGLVVLLVLIVAQVAPVHMFAANSTQQVVSQQGISGRSRVVLSSNSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRLEFAKNRTTATYAVPEDRAERMLKAVECRVLVPGQDIALARQQLRAWASPFQGA
Ga0184637_100626061	3300018063	Groundwater Sediment	MRGLVVLLVLIVAQVAPFHTFAANSTQQVVSQQGISGRPRVVLSSNSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRLEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGQDIALARQQ
Ga0184640_100314061	3300018074	Groundwater Sediment	MRGLVVLLVLIVAQVAPFHTFAANSTQQVVSQQGISGRSRVVLSSNSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRLEFAKNRTTATYAVPEDRAERMLKAVECRVLVPGQDIALARQQLRAWASPSQGAAHQREARK
Ga0184609_101993402	3300018076	Groundwater Sediment	FAANSTQQVVSRQGISGRPRVVLGINSTTTQRQVHLVGHGAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGQDIALARQQLRAWASPSQGAAHQREARK
Ga0184633_1000058816	3300018077	Groundwater Sediment	MRGLVVLLVLIVAQVAPFHTFAANSTQQVVSQQGISGRPRVVLSSNSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRLEFAKNRTTATYAVPEDRAERMLKAVECRVLVPGQDIALARQQLRAWASPSQGAAHQREARK
Ga0184639_100205907	3300018082	Groundwater Sediment	MRGLVVLLVLIVAQVAPFHTFAANSTQQVVSQQGISGRPRVVLSSNSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRLEFAKNRTTATYAVPEDRAERMLKAVECRVLVPGQDIALARQQLRAWASPSQG
Ga0066655_102065841	3300018431	Grasslands Soil	LWESAMRGMVVLLVLIVAQVAPPHTFAANSTPRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGHDIALARQQLRAWASPSQGAAHQREARK
Ga0066667_102142732	3300018433	Grasslands Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPGTTQRQVQLVGQGISTYPTVDFTCDGARWTLLLTRSEATRNRTTATYAVPENRAGQMLRAAECRLLIPGQDIALARQQLRAWPSPSQGAAHQREARAVRQSQGVK
Ga0066662_100763423	3300018468	Grasslands Soil	MRGMVLLIVLVVGQTQPVIRQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPEHRAGQMLRAAECRLLIPGQDIALARQQLRAWPSQGASHRREARAVRQSQGVK
Ga0184646_10569443	3300019259	Groundwater Sediment	QVAPFHTFAANSTQQVVSQQGISGRPRVVLSSNSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRLEFAKNRTTATYAVPEDRAERMLKAVECRVLVPGQDIALARQQLRAWASPSQGAAHQREARK
Ga0210379_100469623	3300021081	Groundwater Sediment	MRGLVVLLVLIVAQVAPSHTFAANSTQQVVSRQGISGRPRVVLSIDSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTFPLTRLELAKNRTSATYAVPEDRAERMLKAVECRLLIPGQDIALARQQLRAWASPFQGAAHQREARK
Ga0209438_10792531	3300026285	Grasslands Soil	MRSMVALLVLAAAQGAPSHTIAANATQQPVRQEGTSRGPQVVLSTDRKTTQRQVQLVGQGVSAYPTVDITCDGKKRTFPLMRSEFIKNRTTAIYAVPEDHARRMLRAVECRVLTPSQDIPLARQQLRAWASPPPGTAHG
Ga0209235_10388202	3300026296	Grasslands Soil	MRGMVVLLVLVVAQVAPSHTFAANSTQRVVSQQGISGGPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNGTTAIYAVPEDRADRMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK
Ga0209237_10116206	3300026297	Grasslands Soil	MRGMVVLLVPIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWVSPSQGAAHQREGQK
Ga0209237_10361982	3300026297	Grasslands Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPENRAGQMLRAAECRLLIPGQDIALARQQLRAWPSQGASHQREARAVRQSQGVK
Ga0209237_10996172	3300026297	Grasslands Soil	MRGMVVLLVLIVAQVAHSHTFAANSTHRVVSQQGISGGPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNGTTAIYAVPEDRADRMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK
Ga0209761_10627616	3300026313	Grasslands Soil	MRGMVVLLVLIVAQVAHSHTFAANSTQRVVSQQGISGGPRVVLSINSKTTQRQVHLVGHGSSYPTVDVTCDGKRWTLPLTRSEFAKNGTTAIYAVPEDRADRMLKAVECRVLIPGRDIALARQQLRAWA
Ga0209761_11049254	3300026313	Grasslands Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPEHRAGQMLRAAECRLLIPGQDIALARQQLRAWPSQGASHQREARAVR
Ga0209761_12707301	3300026313	Grasslands Soil	TIVCLSARLWEYAMRGMVVLLVLIVAQVAHSHTFAANSTHRVVSQQGISGGPRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNGTTAIYAVPEDRADRMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK
Ga0209803_11224301	3300026332	Soil	IGTIVCLSACLWEPAMRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPEHRAGQMLRAAECRLLIPGQDIALARQQLRAWPSPPQGAAHRREARAVRQSQGVK
Ga0257170_10082101	3300026351	Soil	VVLLVLIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREGQK
Ga0257177_10196192	3300026480	Soil	MRGMVVLLVLIVAQGAPSHTFAANSGGPRVVLSINSKTAQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREGQK
Ga0209157_10035535	3300026537	Soil	MRGMVVLLVLIVAQVAPPHTFAANSTPRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGHDIALARQQLRAWASPSLGAAH
Ga0209157_13797981	3300026537	Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPENRAGQMLRAAECRLLIPGQDIALARQQLRAWPSPPQGAAHRREARAVRQSQGVK
Ga0209056_104568442	3300026538	Soil	MRGMVILLVLVVGQTQPVISQERISGSPRVVLSINPRTTQRQVQLVGQGISTYPTVDFTCDGARWTLPLTRSEATRNRTTATYAVPENRAGQMLRAAECRLLIPGQDIALARQQLRAWPSPPQGASHRREARAVRQSQGVK
Ga0209376_12733391	3300026540	Soil	TEVPATLIGTIVCLSARLWESAMRGMVVLLVLIVAQVAPPHTFAANSTPRVVSQQGISGRPRVVLSINSKTTQRQVHLVGGSSSYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLVPGHDIALARQQLRAWASPSLGAAH
Ga0209897_10350371	3300027169	Groundwater Sand	MRGMVVVLVLIVAQVAPSHTFAANSTPQVVSQQGNSGGPRVLLSINSKTTQRQVHLVGHGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTMATYAVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPSQGAAHQQEAPKQKRGLKAG
Ga0209899_10108143	3300027490	Groundwater Sand	MRGMVVLLVLIVAQVAPSHTFAANSTPQVVSQQGNSGGPRVLLSINSKTTQRQVHLVGHGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTMATYAVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPSQGAAHQQEAPKQKRGLKAG
Ga0209887_10044444	3300027561	Groundwater Sand	MRGMVVVLVLIVAQVAPSHTFAANSTPQVVSQQGNSGGPRVLLSINSKTTQRQVHLVGHGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPSQGTAHQQEAPKQKRGLKAG
Ga0209874_10138854	3300027577	Groundwater Sand	MRGLIVLLVLIVAQVAPSHTFAANSTQRVVSRQGISGGPRVVLSINSKTTQRQVHLVGHGGSAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPPQGTTHQQEAPKQKRGLKAG
Ga0209388_10536652	3300027655	Vadose Zone Soil	MRGMVVLLVLIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREGQK
Ga0209388_11752991	3300027655	Vadose Zone Soil	MRGMVVVLVLAVGQVAPSYTFAANSTQLVVSQDGISRGPRVVLSINPKTTQREIRLVGQGISAYPTVDITCDGKKWTLPLTRSEFIKNRTTAIYAVPEDHARRMLKAVECRLLAPSQDIALARQQLRAWGSPSPGTAHRPEAREQTHRLTASSSEPTPPRPVAQV
Ga0209588_12155812	3300027671	Vadose Zone Soil	MRGMVVLLVLIALIVAQGAPSHTFAANSGGPRVVLSINSKTAQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREARK
Ga0209180_100096527	3300027846	Vadose Zone Soil	MRGMVVLLVLIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDITCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREGQK
Ga0209590_100005528	3300027882	Vadose Zone Soil	MRGMVVLLVPIALIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECSVLIPGRDIALARQQLRAWVSPSQGAAHQREGQK
Ga0209860_10604551	3300027949	Groundwater Sand	MRGMVVVLVLIVAQVAPSHTFAANSTPQVVSQQGNSGGPRVLLSINSKTTQRQVHLVGHGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTMATYAVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPSQGAAHQQEAPKQKRG
Ga0209889_10257502	3300027952	Groundwater Sand	MRGMVVLLVLIVAQVAPSYTFAANSTQQVSQRGISGRPRVVLSINSKTTQRQVHLVGHGRSAYPTVDVTCDGKRWTLPLARSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGQDIALARQQLRVWASPSQGAAH
Ga0209889_10432811	3300027952	Groundwater Sand	MVVVLVLIVAQVAPSHTFAANSTPQVVSQQGNSGGPRVLLSINSKTTQRQVHLVGHGSSGYPTVDVTCDGKRWTLPLTRSEFAKNRTMATYAVPEDRAERMLKAVECRLLIPGRDIALARQQLRAWASPSQGAAHQQEAPKQKRGLKAG
Ga0257175_10010781	3300028673	Soil	MRGMVVLFVLIVAQGAPSHTFAANSGGPRVVLSINSKTTQRQVHLVGHGSPAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRVLIPGRDIALARQQLRAWASPSQGAAHQREGQK
Ga0307278_101042971	3300028878	Soil	NSTPQVVSRQGISGRPRVVLGINSTTTQRQVHLVGHGAYPTVDVTCDGKRWTLPLTRSEFAKNRTTATYAVPEDRAERMLKAVECRLLIPGQDIALARQQLRAWASPSQGAAHQREARK
Ga0307469_100812682	3300031720	Hardwood Forest Soil	VYRIGLVALLTFLLVQTYETQPVVAQADPRVVLRIDPKTGQRQVQLIGRSTPAYPTVDITCDGKKRTFTLTRSEFIKNRTTAIYAVPEDHAGRMLKAVECRLLTPGRDIALSRQQLRVWASPSQGTAHQ
Ga0307469_106783472	3300031720	Hardwood Forest Soil	MRGLAVLFVLIAAQVAPSHAFATNLTQQVVPRKGISGVPRVVLRIDPKTTQRQVQLMGQGISTYPTVDITCDGNRWTLPLTRSEFAKTRTTAIYAVPEDRAGRMLNAVACRLLIPGHDIALARQQLRAWASPSQGAAHQQEARKQ
Ga0364924_001333_2889_3314	3300033811	Sediment	MVVLLVLIVAQVAPSHTFAANSTSQVVSQQRISGRLRVVLSINSKTTQRQVHLVGHGSSAYPTVDVTCDGKRWTLPLTRSEFAKNGTTATYAVPEDRAERMLKAVECRLLIPGQDIALARQQLRAWASPSQGTTHQREARK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088601

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences