NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F088462

Metagenome / Metatranscriptome Family F088462

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088462
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 56 residues
Representative Sequence MLPGLGWFLQVLALVIVGSALLFGLIYDQIRLELAVAAGGGVLFLVGRWLQSRAGR
Number of Associated Samples 85
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 65.14 %
% of genes near scaffold ends (potentially truncated) 11.93 %
% of genes from short scaffolds (< 2000 bps) 66.97 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.927 % of family members)
Environment Ontology (ENVO) Unclassified
(25.688 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.037 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 61.90%    β-sheet: 0.00%    Coil/Unstructured: 38.10%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF04542Sigma70_r2 23.85
PF08281Sigma70_r4_2 17.43
PF13490zf-HC2 14.68
PF00160Pro_isomerase 6.42
PF027373HCDH_N 2.75
PF00085Thioredoxin 2.75
PF13646HEAT_2 1.83
PF00005ABC_tran 1.83
PF04073tRNA_edit 0.92
PF12697Abhydrolase_6 0.92
PF07676PD40 0.92
PF01578Cytochrom_C_asm 0.92
PF14031D-ser_dehydrat 0.92
PF04461DUF520 0.92
PF08486SpoIID 0.92
PF13489Methyltransf_23 0.92
PF11104PilM_2 0.92
PF01564Spermine_synth 0.92
PF00364Biotin_lipoyl 0.92
PF02604PhdYeFM_antitox 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 23.85
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 23.85
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 23.85
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 23.85
COG0652Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin familyPosttranslational modification, protein turnover, chaperones [O] 6.42
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 2.75
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 2.75
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 2.75
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 2.75
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 2.75
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 2.75
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 2.75
COG1666Cyclic di-GMP-binding protein YajQ, UPF0234 familySignal transduction mechanisms [T] 0.92
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.92
COG2385Peptidoglycan hydrolase (amidase) enhancer domain SpoIIDCell wall/membrane/envelope biogenesis [M] 0.92
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.92

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_119166273All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300003267|soilL1_10139391All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300004081|Ga0063454_101588295All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300004463|Ga0063356_100337939All Organisms → cellular organisms → Bacteria1894Open in IMG/M
3300004643|Ga0062591_100248504All Organisms → cellular organisms → Bacteria1355Open in IMG/M
3300005093|Ga0062594_101616558All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300005328|Ga0070676_10960683All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300005337|Ga0070682_100850762All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium745Open in IMG/M
3300005340|Ga0070689_101729014All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300005353|Ga0070669_100000025All Organisms → cellular organisms → Bacteria170551Open in IMG/M
3300005364|Ga0070673_100093199All Organisms → cellular organisms → Bacteria2466Open in IMG/M
3300005364|Ga0070673_101272657All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300005367|Ga0070667_100041212All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales3873Open in IMG/M
3300005543|Ga0070672_101889849All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300005544|Ga0070686_100700309All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium808Open in IMG/M
3300005587|Ga0066654_10005651All Organisms → cellular organisms → Bacteria4376Open in IMG/M
3300005587|Ga0066654_10068276All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300005617|Ga0068859_100556773All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300005719|Ga0068861_100192583All Organisms → cellular organisms → Bacteria1706Open in IMG/M
3300005844|Ga0068862_100000933All Organisms → cellular organisms → Bacteria28189Open in IMG/M
3300006844|Ga0075428_100742901All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300006852|Ga0075433_10048112All Organisms → cellular organisms → Bacteria3708Open in IMG/M
3300006853|Ga0075420_100510907All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300006854|Ga0075425_100257932All Organisms → cellular organisms → Bacteria2006Open in IMG/M
3300006871|Ga0075434_100028613All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5478Open in IMG/M
3300006871|Ga0075434_100078791All Organisms → cellular organisms → Bacteria3291Open in IMG/M
3300006871|Ga0075434_100201676All Organisms → cellular organisms → Bacteria2009Open in IMG/M
3300006871|Ga0075434_100286182All Organisms → cellular organisms → Bacteria1668Open in IMG/M
3300006876|Ga0079217_10638192All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300006894|Ga0079215_10844231All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300006903|Ga0075426_10003322All Organisms → cellular organisms → Bacteria11483Open in IMG/M
3300006903|Ga0075426_10023194All Organisms → cellular organisms → Bacteria4436Open in IMG/M
3300006904|Ga0075424_100152742All Organisms → cellular organisms → Bacteria2446Open in IMG/M
3300006914|Ga0075436_100807891All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300006918|Ga0079216_10198553All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300009053|Ga0105095_10297432All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300009087|Ga0105107_10144089All Organisms → cellular organisms → Bacteria1676Open in IMG/M
3300009553|Ga0105249_10441726All Organisms → cellular organisms → Bacteria1338Open in IMG/M
3300009789|Ga0126307_10541787All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300009840|Ga0126313_10182027All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1605Open in IMG/M
3300009840|Ga0126313_10583282All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300010036|Ga0126305_10000811All Organisms → cellular organisms → Bacteria13576Open in IMG/M
3300010036|Ga0126305_10142466All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1484Open in IMG/M
3300010039|Ga0126309_10137668All Organisms → cellular organisms → Bacteria1299Open in IMG/M
3300010039|Ga0126309_10212734All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1076Open in IMG/M
3300010040|Ga0126308_10976497All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300010042|Ga0126314_11299789All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300010045|Ga0126311_10794031All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300010359|Ga0126376_10118340All Organisms → cellular organisms → Bacteria2061Open in IMG/M
3300010371|Ga0134125_10000024All Organisms → cellular organisms → Bacteria236050Open in IMG/M
3300010397|Ga0134124_10001898All Organisms → cellular organisms → Bacteria → Acidobacteria16831Open in IMG/M
3300010400|Ga0134122_10008887All Organisms → cellular organisms → Bacteria7496Open in IMG/M
3300010400|Ga0134122_10027390All Organisms → cellular organisms → Bacteria4298Open in IMG/M
3300010400|Ga0134122_10042708All Organisms → cellular organisms → Bacteria3463Open in IMG/M
3300010400|Ga0134122_11317688All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300010401|Ga0134121_10001716All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium20199Open in IMG/M
3300010401|Ga0134121_10639247All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300010401|Ga0134121_12027984All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300012174|Ga0137338_1027355All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1146Open in IMG/M
3300012357|Ga0137384_11148833All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300012469|Ga0150984_107809831All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300012989|Ga0164305_10313055All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1166Open in IMG/M
3300014271|Ga0075326_1100977All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300014326|Ga0157380_10760637All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300014326|Ga0157380_10979230All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300014326|Ga0157380_12554529All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300017965|Ga0190266_10106874All Organisms → cellular organisms → Bacteria1165Open in IMG/M
3300018422|Ga0190265_10000049All Organisms → cellular organisms → Bacteria140510Open in IMG/M
3300018422|Ga0190265_10000280All Organisms → cellular organisms → Bacteria41493Open in IMG/M
3300018422|Ga0190265_10197170All Organisms → cellular organisms → Bacteria → Proteobacteria2020Open in IMG/M
3300018431|Ga0066655_10061430All Organisms → cellular organisms → Bacteria1978Open in IMG/M
3300018431|Ga0066655_10249179All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300018432|Ga0190275_11007811All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium904Open in IMG/M
3300018465|Ga0190269_10011875All Organisms → cellular organisms → Bacteria3914Open in IMG/M
3300018466|Ga0190268_10022094All Organisms → cellular organisms → Bacteria2092Open in IMG/M
3300018466|Ga0190268_10385689All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium893Open in IMG/M
3300018468|Ga0066662_10009188All Organisms → cellular organisms → Bacteria5062Open in IMG/M
3300018476|Ga0190274_10059176All Organisms → cellular organisms → Bacteria2825Open in IMG/M
3300021333|Ga0210324_1099053All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300022886|Ga0247746_1189466All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300023169|Ga0247762_1144184All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300023260|Ga0247798_1039395All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300023268|Ga0247765_1004865All Organisms → cellular organisms → Bacteria3872Open in IMG/M
3300024430|Ga0196962_10123156All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300025324|Ga0209640_10354261All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300025907|Ga0207645_10771494All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium654Open in IMG/M
3300025923|Ga0207681_10000018All Organisms → cellular organisms → Bacteria278874Open in IMG/M
3300025960|Ga0207651_11005420All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300025960|Ga0207651_11728341All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300025986|Ga0207658_10055578All Organisms → cellular organisms → Bacteria2934Open in IMG/M
3300026118|Ga0207675_101637033All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300026308|Ga0209265_1075112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium982Open in IMG/M
3300026320|Ga0209131_1136285All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300027528|Ga0208985_1093818All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300028380|Ga0268265_10000307All Organisms → cellular organisms → Bacteria54460Open in IMG/M
3300028381|Ga0268264_11682965All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium645Open in IMG/M
3300031231|Ga0170824_128835811All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300031366|Ga0307506_10000011All Organisms → cellular organisms → Bacteria94092Open in IMG/M
3300031366|Ga0307506_10059088All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300031616|Ga0307508_10005991All Organisms → cellular organisms → Bacteria11470Open in IMG/M
3300031740|Ga0307468_100372907All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300031740|Ga0307468_101069371All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300031740|Ga0307468_101731867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300032157|Ga0315912_11042440All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300032174|Ga0307470_10083684All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1770Open in IMG/M
3300034026|Ga0334946_056947All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300034132|Ga0334915_073083All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium702Open in IMG/M
3300034172|Ga0334913_001349All Organisms → cellular organisms → Bacteria → Acidobacteria9422Open in IMG/M
3300034402|Ga0334960_001751All Organisms → cellular organisms → Bacteria4973Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.93%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.01%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil9.17%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil8.26%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.34%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.67%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.75%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil2.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.75%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.83%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.83%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.92%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.92%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.92%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.92%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.92%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.92%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.92%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.92%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.92%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust0.92%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.92%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.92%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012174Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2EnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014271Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300021333Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.191 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022886Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5EnvironmentalOpen in IMG/M
3300023169Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4EnvironmentalOpen in IMG/M
3300023260Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6EnvironmentalOpen in IMG/M
3300023268Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6EnvironmentalOpen in IMG/M
3300024430Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300027528Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300034026Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMSEnvironmentalOpen in IMG/M
3300034132Biocrust microbial communities from Mojave Desert, California, United States - 11HMCEnvironmentalOpen in IMG/M
3300034172Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMSEnvironmentalOpen in IMG/M
3300034402Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNSEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_11916627323300002568SoilMSGTGWVLQVLALVIVGSAFVLGMMYDQIRLELAVAAGGGVLFLLGRWLQGREPR*
soilL1_1013939133300003267Sugarcane Root And Bulk SoilMLPGLGWFLQVLALVIVGGAFVFGMAYNQVRMELAVAAVGGGLFLLGRWLQSREGR*
Ga0063454_10158829513300004081SoilMSGFGWLLQVLGLVIVGSALILGMAYDQIRLELAVAAGGGVLFLLGRWLQGRESR*
Ga0063356_10033793933300004463Arabidopsis Thaliana RhizosphereMLPGLGWLLQVLALVLVGCALLFGLIYDQIRLELAVAAAGGVLFLAGRWLRSREGS*
Ga0062591_10024850433300004643SoilMSTGLGWFLQVIALVIVGSALVLGLFYDRIRLELGVAAAGALLFLLGRWLQRRAGS*
Ga0062594_10161655813300005093SoilMLSGLGWTLQLLALAIVGSSLLVGLVSDQIRAELATAAVGAVLFLLGRWLQSRQGR*
Ga0070676_1096068323300005328Miscanthus RhizosphereMLSSLGWTLQLLALAIVGSSLLFGLIYDQIRLELAVTAGGAALFLLGRWLQSREGR*
Ga0070682_10085076223300005337Corn RhizosphereFGWTLQLLGLAIVGSSLLFGLIYDQIRLELAVAAGGTALFLLGRWLQSRAGN*
Ga0070689_10172901423300005340Switchgrass RhizosphereWTLQLLALALVGSSLLIGLVYNEVRAELAVCAVGAVMFLFGRWLQNRQGR*
Ga0070669_100000025263300005353Switchgrass RhizosphereMLPGLGWFLQVLALVIVGSALLFGMIYNQVRLELAVAAAGGVLFLLGKWLQSRQGR*
Ga0070673_10009319913300005364Switchgrass RhizosphereGIPDPPLRARMLSSLGWTLQLLALAIVGSSLLFGLIYDQIRLELAVTAGGAALFLLGRWLQSREGR*
Ga0070673_10127265723300005364Switchgrass RhizosphereMTASLGWVLQLLALALVGSGLLVGLVYNEVRAEVAICAVGGAMFLFGRWLQARAGR*
Ga0070667_10004121233300005367Switchgrass RhizosphereMLPSLAWTLQIVALAIVGSSLLIGLIYDQIRLELAVAAAGAALFLLGRWLQSRAGQ*
Ga0070672_10188984913300005543Miscanthus RhizosphereSLPSKARPPMLPGLGWFLQVLALVIVGSALVFGMVYNQVRMELAVAAVGGGLFLLGKWLQSREGR*
Ga0070686_10070030913300005544Switchgrass RhizospherePPMLPGLGWFLQVLALVIVGSALVFGMVYNQVRMELAVAAVGGGLFLLGKWLQSREGR*
Ga0066654_1000565123300005587SoilMLASLGWVCQLIALAIVGSSLLFGIFYNEIRLELAVTAGGAALFLFGRWLQTRARG*
Ga0066654_1006827623300005587SoilMSGIGWFLQVLALVIVGSALVLGMIYDQIRLELAVATAGGVLFLLGRWLQGRESR*
Ga0068859_10055677323300005617Switchgrass RhizosphereMLPGLGWFLQVLALVIVGSALVFGMVYNQVRMELAVAAVGGGLFLLGKWLQSREGR*
Ga0068861_10019258333300005719Switchgrass RhizosphereMSGFGWLLQVLGLVIVGSALILGMTYDQIRLELAVAAGGSVLFLLGRWLQGRENR*
Ga0068862_10000093363300005844Switchgrass RhizosphereMVTSLAWVLQFLALVLVGSGLLIGLVYDKIRLELAICAVGGALFLLGRWLQSRQSP*
Ga0075428_10074290123300006844Populus RhizosphereMVTSLAWVLQFLALVLVGSGLLIGLVYDKIRLELAICAVGGALFLLGRWLQSRQGP*
Ga0075433_1004811233300006852Populus RhizosphereMLPGIGWFLQVLALVIVGSAFLFGLIYDQIRLELAVAAAGAVLFLVGRWLQSRVGR*
Ga0075420_10051090713300006853Populus RhizosphereWFLQVLGLVIVGSALVFGLTYDQIRLELAVAAGGGVLFLLGRWLQGRGGR*
Ga0075425_10025793233300006854Populus RhizosphereMLSSLGWALQLVALAIVGSSLLFGLIYDQIRLELAVAAGGAALFLLGRWLQSRAGR*
Ga0075434_10002861323300006871Populus RhizosphereMSGIGWYLQALALVIVGSAFVLGLMYDQIRLELAVAAGGGVLFLLGRWLQGRESR*
Ga0075434_10007879123300006871Populus RhizosphereMLPGIGWFLQVLALVIVGSAFLFGLIYDQIRLELAVAAAGAVLFLVGRWLQSRAGR*
Ga0075434_10020167623300006871Populus RhizosphereMLPGIGWALQILALVIVGAAFLFGLIYDQIRLELAVAAAGGVLFLVGRWLQAREGR*
Ga0075434_10028618223300006871Populus RhizosphereMLSSLGWALQLVALAIVGCSLLFGLIYDQVRLELAVAAGGAALFLLGRWLQSRAGR*
Ga0079217_1063819223300006876Agricultural SoilMLTSFAWVLQFLALVLVGSGLLIGLVYNQVRVELAICALGGVLFLLGRWLQGRHGH*
Ga0079215_1084423113300006894Agricultural SoilALVLVGSGLLIGLVYNQIRVELAICALGGMLFLLGRWLQGRHGH*
Ga0075426_10003322123300006903Populus RhizosphereMLSSLGWTLQLVALAIVGSSLLFGLIYDQVRLELAVAAGGAALFLLGRWLQSRAGR*
Ga0075426_1002319443300006903Populus RhizosphereMLPGLGWFLQILALVIVGAAFLFGLIYDQIRLELAVAAAGGVLFLVGRWLQAREGR*
Ga0075424_10015274233300006904Populus RhizosphereMLSSLGWTLQLVALALVGCSLLFGLIYDQIRLELAVAAGGAALFLLGRWLQSRAGH*
Ga0075436_10080789123300006914Populus RhizosphereMLPGIGWALQILALVIVGGAFLFGLIYDQIRLELAVAAAGGVLFLVGRWLQAREG
Ga0079216_1019855333300006918Agricultural SoilMLTSFAWVLQFLALVLVGSGLLIGLVYNQVRVELAICALGGALFLLGRWLQGRHGH*
Ga0105095_1029743213300009053Freshwater SedimentVLGSLGWTLQLLGLVIVGSALLLGLAYDEIRMELAVAAAGGGLFLLGRWLQGREDR
Ga0105107_1014408923300009087Freshwater SedimentVLGSLGWTLQLLGLVIVGSALLLGLAYDEIRMELAVAAAGGGLFLLGRWLQGREDR*
Ga0105249_1044172633300009553Switchgrass RhizosphereMVTSLAWVLQFLALVLVGSGLLIGLVYDKIRLELAICAVGGALFLIGRWLQSRQGP*
Ga0126307_1054178723300009789Serpentine SoilMLPGLGWFLQVLALVIVGSALIFGMIYNQVRLELAVAAVGGALFLLGKWLQSREGR*
Ga0126313_1018202733300009840Serpentine SoilMLPGLGWFLQVLALVVVGSALIFGMIYSQVRLELAVAAVGGALFLLGKWLQGREGR*
Ga0126313_1058328223300009840Serpentine SoilMLTSLAWVLQFLALVLVGSGLLIGLVYNQVRVELAICALGGALFLLGRWLQSRHGH*
Ga0126305_10000811133300010036Serpentine SoilMRSGLGWFLQVLALVIVGSALVFGMIYDQIRMELAVAAVGGVLFLLGKWLQSREGR*
Ga0126305_1014246623300010036Serpentine SoilMLTSFAWVLQFFALVLVGSGLLIGLVYNQVRLELAICALGGVLFLLGRWLQSRHGH*
Ga0126309_1013766823300010039Serpentine SoilMLTSLAWVLQFLALVLVGSGLLIGLVYNQVRVELAICALGGAMFLLGRWLQSRHGH*
Ga0126309_1021273413300010039Serpentine SoilMIASLGWSLQLLALVLVGSGLLIGLFYDQIRAELAVCAVGGALFLLGRWLQSREGR*
Ga0126308_1097649723300010040Serpentine SoilMVPGLGWFLQVLALVIVGSALIFGMVYNQVRLELAVAAVGGALFLLGKWLQSREGR*
Ga0126314_1129978913300010042Serpentine SoilMLPGLGWFLQVLALVIVGSALIFGMIYNQVRLELAVAAVGGALFLIGKWLQSREGR*
Ga0126311_1079403113300010045Serpentine SoilMLTSLAWVLQFLALVLVGSGLLIGLVYNQVRVELAICAVGGVMFLLGRWLQSRHGR*
Ga0126376_1011834033300010359Tropical Forest SoilMLPGIGWSLQVLALVMVGAAFLFGLVYDQIRLELAVAAAGGVLFLLGRWLQGREGR*
Ga0134125_100000241853300010371Terrestrial SoilMSGFGWVLQVLALVIVGSAFVLGMMYDQIRLELAVAAGGGVLFLLGRWLQGRENR*
Ga0134124_10001898173300010397Terrestrial SoilMLPSLAWTLQLVALAIVGSSLLIGLIYDQIRLELAVAAAGAALFLLGRWLQSRAGQ*
Ga0134122_1000888783300010400Terrestrial SoilMLPGLGWFLQVLALVIVGSALLFGLIYDQIRLELAVAAAGGVLFIVGRWLQSRAGR*
Ga0134122_1002739033300010400Terrestrial SoilMLPGLGWLLQVLALVIVGSSLVFGLFYDQIRLELAVAAAGAVLFLAGRWLRSREGR*
Ga0134122_1004270843300010400Terrestrial SoilMLPGLGWLFQVLALVIVASALLFGLIYDRIRLELAVAAVGGALFLLGRWLQSRAGR*
Ga0134122_1131768823300010400Terrestrial SoilMSGFGWLLQVLGLVIVGSALILGMAYDQIRLELAVASAGAVLFLLGRWLQGRESR*
Ga0134121_10001716113300010401Terrestrial SoilMSGFGWYLQALALVIVGSAFVLGLMYDQVRLELAVAAGGGVLFLVGRWLQGRESR*
Ga0134121_1063924723300010401Terrestrial SoilMLSSLGWTFQLLALAIVGSSLLFGLIYDQIRLELAVAAGGAALFLLGHWLQTRAGR*
Ga0134121_1202798423300010401Terrestrial SoilMSGFGWVLQVLALVIVGSAFVLGMMYDQIRLELAVAAGGGLLFLLGRWLQGRESR*
Ga0137338_102735523300012174SoilMLSGLGWFLQVVGLVVVGSALVFGMTYDQIRLELAVAAAGGALFLAGKWLHSREKR*
Ga0137384_1114883323300012357Vadose Zone SoilMSGIGWALQVLALVIVGSSFVLGLMYDQIRLELAVAAAGGVLFLLGRWLQSRAAH*
Ga0150984_10780983113300012469Avena Fatua RhizosphereMSGTGWGLQVLALVIVGSAFVLGMMYDQIRLELAVAAGGGVLFLLGRWLQGREPR*
Ga0164305_1031305513300012989SoilMSGTGWVLQVLALVIVGSAFVLGMMYDQIRLELAVAAGGGALFLLGRWLQGRESR*
Ga0075326_110097723300014271Natural And Restored WetlandsMLPGLGWFLQVVGLVIVGGALVFGLIYDQIRLELAVAAAGGVLFLAGRWLQGRPGR*
Ga0157380_1076063723300014326Switchgrass RhizosphereMLASVGWGLQLLALALVGSSLLIGLVYNEVRTELAVCAVGGVLFLFGRWLQSRPDR*
Ga0157380_1097923013300014326Switchgrass RhizosphereMVTSLAWVLQFLALVLVGSGLLIGLVYDKIRLELAICALGGALFLLGRWLQSRQGD*
Ga0157380_1255452913300014326Switchgrass RhizosphereMLTSLAWVLQFLALVLVGSGLLIGLAYNQVRVELAICAVGGALFLLGRWLQSRHGR*
Ga0190266_1010687423300017965SoilMTASLGWVLQLLALALVGSGFLVGLIYNEVRAELAICAVGGAMFLLGRWLQARAGR
Ga0190265_10000049673300018422SoilMLSSFGWTLQLLALALVGGGFLIGLFHNQIRAELAVCAVGGVLFLLGRWLQSREGR
Ga0190265_10000280133300018422SoilMLGSFGWALQVLALVIVGASLLLGLTYNQIRMELAFSAFGGVLFLLGRWLQSRERR
Ga0190265_1019717033300018422SoilMLTSFAWVLQFLALVLVGSGLLIGLVYNQVRVELAICALGGALFMLGRWLQSRRGH
Ga0066655_1006143023300018431Grasslands SoilMSGIGWFLQVLALVIVGSALVLGMIYDQIRLELAVASAGGVLFLLGRWLQGRESR
Ga0066655_1024917923300018431Grasslands SoilMLASLGWVCQLIALAIVGSSLLFGIFYNEIRLELAVTAGGAALFLFGRWLQTRARG
Ga0190275_1100781133300018432SoilWVLQFLALVLVGSGLLIGLVYNQVRVELAICALGGALFLLGRWLQSRHGH
Ga0190269_1001187533300018465SoilMLTSFAWVLQFLALVLVGSGLLIGLVYNQVRVELAICALGGVLFLLGRWLQGRHGH
Ga0190268_1002209433300018466SoilMLTSFAWVLQFLALVLVGSGLLIGLVYNQVRVELAICAVGGALFLLGRWLQGRHGH
Ga0190268_1038568923300018466SoilMTASLGWVLQLLALALVGGGFLVGLVYNEIRAELAICALGGVMFLLGRWLQGRAGR
Ga0066662_1000918853300018468Grasslands SoilMSGIGWFLQVLALVIVGSALVLGMMYDQIRLELAVASAGGVLFLLGRWLQGRESR
Ga0190274_1005917653300018476SoilMLPGLGWFLQVLALVIVGSALIFGMIYNQVRLELAVAAVGGALFLLGKWLQSREGR
Ga0210324_109905323300021333EstuarineMTASLAWVLQLLALALVGSGFLVGLVYNEIRAELAICAVGGGLFLLGRWLQSRAGR
Ga0247746_118946623300022886SoilMLSSFGWTFQLLGLAIVGSSLLFGLIYDQIRLELAVAAGGAALFLLGRWLQSRAGN
Ga0247762_114418413300023169Plant LitterMFSSLGWLFQVLGLVIVGSALVFGMAYNQVRLELAVAAGGGVLFLLGRWLQSRGAR
Ga0247798_103939513300023260SoilMVTSLAWVLQFLALVLVGSGLLIGLVYDKIRLELAICALGGVLFLLGRWLQSRQGG
Ga0247765_100486523300023268Plant LitterMLSSFGWTLQLLGLAIVGSSLLFGLIYDQIRLELAVAAGGTALFLLGRWLQSRAGH
Ga0196962_1012315613300024430SoilMRAGLGWALQVLALVIVGGSLLFGLAYDKIRLELAWAAVGGGLFLLGRWLQGGAGDAR
Ga0209640_1035426133300025324SoilMLAGLGWTLQLLALAIVGSSLLVGLASNEIRAELAVAAGGGILFLVGRWLQSRTGR
Ga0207645_1077149423300025907Miscanthus RhizosphereMLSSLGWTLQLLALAIVGSSLLFGLIYDQIRLELAVTAGGAALFLLGRWLQSREGR
Ga0207681_100000182373300025923Switchgrass RhizosphereMLPGLGWFLQVLALVIVGSALLFGMIYNQVRLELAVAAAGGVLFLLGKWLQSRQGR
Ga0207651_1100542023300025960Switchgrass RhizosphereMTASLGWVLQLLALALVGSGLLVGLVYNEVRAEVAICAVGGAMFLFGRWLQARAGR
Ga0207651_1172834113300025960Switchgrass RhizosphereMLPGLGWFLQVLALVIVGSALVFGMVYNQVRMELAVAAVGGGLFLLGKWLQSREGR
Ga0207658_1005557853300025986Switchgrass RhizosphereMLPSLAWTLQIVALAIVGSSLLIGLIYDQIRLELAVAAAGAALFLLGRWLQSRAGQ
Ga0207675_10163703323300026118Switchgrass RhizosphereMSGFGWLLQVLGLVIVGSALILGMTYDQIRLELAVAAGGSVLFLLGRWLQGRENR
Ga0209265_107511213300026308SoilMSGIGWFLQVLALVIVGSALVLGMIYDQIRLELAVATAGGVLFLLGRWLQGRESR
Ga0209131_113628523300026320Grasslands SoilMSGIGWVLQVLALVIVGSSFVLGMMYDQIRLELAVAAAGGVLFLLGRWLQGREGR
Ga0208985_109381823300027528Forest SoilMSGIGWALQVLALVIVGSSFVLGLIYDQVRLELAVAAGGGLLFLLGRWLQARESR
Ga0268265_10000307223300028380Switchgrass RhizosphereMVTSLAWVLQFLALVLVGSGLLIGLVYDKIRLELAICAVGGALFLLGRWLQSRQSP
Ga0268264_1168296513300028381Switchgrass RhizosphereALALVGSSLLIGLVYNEVRAELAVCAVGAVMFLFGRWLQNRQGR
Ga0170824_12883581113300031231Forest SoilVLALVIVGSAFVLGMMYDQIRLELAVAAGGGVLFLLGRWLQGRESR
Ga0307506_10000011823300031366SoilMLSSFGWTLQLLGLGIVGSSLLLGLIYDQIRLELAVAAGGAALFLLGRWLQSRAGN
Ga0307506_1005908823300031366SoilMLPSLAWTLQLVALALVGSSLLIGLVYDQIRLELAVAAFGAALFLLGRWLQSRAGR
Ga0307508_10005991113300031616EctomycorrhizaMLPSLAWTLQLVALAIVGSSLLIGLVYDQIRLELAVAAVGAALFLLGRWLQSRAGR
Ga0307468_10037290723300031740Hardwood Forest SoilMSTGLGWFLQVIALVVVGSALVFGLFYDRIRLELGVAAAGALLFLLGRWLQRREGR
Ga0307468_10106937123300031740Hardwood Forest SoilMLPGLGWFLQVLALVIVGSALLFGLIYDQIRLELAVAAGGGVLFLVGRWLQSRAGR
Ga0307468_10173186723300031740Hardwood Forest SoilMSGFGWLLQVLGLVIVGSALILGMAYDQIRLELAVAAGGGVLFLLGRWLQGRGNR
Ga0315912_1104244023300032157SoilMLSGLGWTLQLLALAIVGSSLLVGLVSDQIRAELATAAVGAVLFLLGRWLQSRERR
Ga0307470_1008368433300032174Hardwood Forest SoilMSGIGWVFQVLALVIVGSSFVLGLVYDQIRLELAVAAAGGALFLLGRWLQARESR
Ga0334946_056947_342_5123300034026Sub-Biocrust SoilMLSSFGWLFQVLGLVIVGSALIFGMAYDQVRLELAVAAGGGVLFLLGKWLQGREGR
Ga0334915_073083_334_5043300034132Hypolithic BiocrustMLSGLGWLFQVLGLVIVGSALIFGMAYNQVRLELAVAAGGAVLFLLGRWLQGRGVR
Ga0334913_001349_8009_81793300034172Sub-Biocrust SoilMLPGLGWFLQVIALVLVGSALVFGMIYNQVRLELAVAAAGAALFLLGRWLQSREGR
Ga0334960_001751_2030_22003300034402Sub-Biocrust SoilMLPGLGWFLQVIGLVVVGSALVFGLIYNQIRLELAVTAAGGALFLLGRWLQGREGR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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