Metagenome / Metatranscriptome Family F088413

Basic Information
Family ID	F088413
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	108 residues
Representative Sequence	AEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Number of Associated Samples	75
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (96.330 % of family members)
Environment Ontology (ENVO)	Unclassified (96.330 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.165 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180 1Ga0075476_102982071 2Ga0075480_103048731 3Ga0182056_13908571 4Ga0182057_10801532 5Ga0182057_10820922 6Ga0182057_12630371 7Ga0182049_13866261 8Ga0182079_12385062 9Ga0182052_13192932 10Ga0182055_11961222 11Ga0182078_101343762 12Ga0182078_108456721 13Ga0182043_14288302 14Ga0182053_11321752 15Ga0182072_13913842 16Ga0182070_14420462 17Ga0182082_14513901 18Ga0182063_10457722 19Ga0182080_12716351 20Ga0181565_106962451 21Ga0181565_107865442 22Ga0181565_109299351 23Ga0181584_106311931 24Ga0181584_108816052 25Ga0181607_107480692 26Ga0181577_107767222 27Ga0181577_109486882 28Ga0181577_109576722 29Ga0181583_106609912 30Ga0181583_108187181 31Ga0181580_104511331 32Ga0181580_108317941 33Ga0181571_109281891 34Ga0181582_101157011 35Ga0181582_109232852 36Ga0181582_109247651 37Ga0181581_107277331 38Ga0181590_105197541 39Ga0181590_107979632 40Ga0181590_109966831 41Ga0181587_107812902 42Ga0181585_109535252 43Ga0181576_103780032 44Ga0181576_107458032 45Ga0181576_107766412 46Ga0181569_107724262 47Ga0181569_109435422 48Ga0181569_110813891 49Ga0181601_106350661 50Ga0181572_105993452 51Ga0181553_105520122 52Ga0181558_107259172 53Ga0181567_110322051 54Ga0181563_105065071 55Ga0181563_105099472 56Ga0181592_105605442 57Ga0181592_107176691 58Ga0181592_109665732 59Ga0181592_111244211 60Ga0181593_101464504 61Ga0181593_111031112 62Ga0181591_110334591 63Ga0181566_105294881 64Ga0181566_108553562 65Ga0181568_106153882 66Ga0181568_110951502 67Ga0182066_14440551 68Ga0182061_14009151 69Ga0182069_11867052 70Ga0182065_12110852 71Ga0182059_10149652 72Ga0182059_10217512 73Ga0182059_11603152 74Ga0182059_13933031 75Ga0182067_17042741 76Ga0182081_13994321 77Ga0182077_13683692 78Ga0182075_18485041 79Ga0194029_10117163 80Ga0194022_10096253 81Ga0182086_11927503 82Ga0181595_101963292 83Ga0181575_101185853 84Ga0181599_13297441 85Ga0181573_100626284 86Ga0181597_101313783 87Ga0255775_12787402 88Ga0255781_101886011 89Ga0255770_103570512 90Ga0255754_102245401 91Ga0255764_100663024 92Ga0255764_104496041 93Ga0255764_104736081 94Ga0255778_100664554 95Ga0255782_104100022 96Ga0255743_101312461 97Ga0255762_105291871 98Ga0255762_105604611 99Ga0255766_105017672 100Ga0255776_104496321 101Ga0255777_101655901 102Ga0255777_104744111 103Ga0255777_106523281 104Ga0255772_103824121 105Ga0255772_104665821 106Ga0255759_101773711 107Ga0255768_102428001 108Ga0233451_102315601 109Ga0233450_104402862
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180 1Ga0075476_102982071 2Ga0182056_13908571 3Ga0182057_10801532
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180 1Ga0075476_102982071 2Ga0182056_13908571 3Ga0182057_10801532
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.59% β-sheet: 0.00% Coil/Unstructured: 29.41%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF06026	Rib_5-P_isom_A	82.57
PF01725	Ham1p_like	3.67
PF14559	TPR_19	2.75
PF01435	Peptidase_M48	1.83
PF04055	Radical_SAM	1.83

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	82.57
COG0127	Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family	Nucleotide transport and metabolism [F]	3.67

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

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Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Marine	Environmental → Aquatic → Marine	98.17%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	1.83%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	96.33%
River	Environmental → Aquatic → Freshwater → River	1.83%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	96.33%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.83%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	96.33%

Visualization
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Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300016729	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101402AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016732	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101403AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016736	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011508BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016741	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071410CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016742	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011511BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016746	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101401AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016748	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011502CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0075476_102982071	3300006867	Aqueous	ARKHRDNEVVRYLQAEMYITNNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKIFAQDRYKFHLGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRAKFVDEEKRILEIKD*
Ga0075480_103048731	3300008012	Aqueous	NEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRAKFVDEEKRILEIKD*
Ga0182056_13908571	3300016729	Salt Marsh	SKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIKD
Ga0182057_10801532	3300016732	Salt Marsh	NQDFSSLILAGRVYGELEQVPKAEKFFESARKHRDNEVVRYFLAEMYIANNELSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0182057_10820922	3300016732	Salt Marsh	VQKKHRDNEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRAKFVDEEKRILEIKD
Ga0182057_12630371	3300016732	Salt Marsh	SKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0182049_13866261	3300016736	Salt Marsh	KNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0182079_12385062	3300016741	Salt Marsh	LLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0182052_13192932	3300016742	Salt Marsh	VEELLNINEDFSILILAGRVYGELEQVPKAEKFFESARKYRDNEVVRYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRAKFVDEEKRILEIKD
Ga0182055_11961222	3300016746	Salt Marsh	AEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFIDEEKKLLEIKD
Ga0182078_101343762	3300016747	Salt Marsh	YFQTEMYIANNEPSKAIKLLKNFTRVNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0182078_108456721	3300016747	Salt Marsh	RYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0182043_14288302	3300016748	Salt Marsh	DFSSLILAGRVYGELEQLPKAEKFFESARKYRDNEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRAKFVDEEKRILEIKD
Ga0182053_11321752	3300016749	Salt Marsh	MYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRAKFVDEEKRILEIKD
Ga0182072_13913842	3300016754	Salt Marsh	NNELSKAINLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIKD
Ga0182070_14420462	3300016758	Salt Marsh	VQKKHRDNEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0182082_14513901	3300016771	Salt Marsh	EMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0182063_10457722	3300016781	Salt Marsh	QTEMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKNLLEIKD
Ga0182080_12716351	3300016787	Salt Marsh	LSKAIKLLKNFTRLNKTSVFSETLLADTYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFSLAKNLTQNKDFFDVIDSRLKFVDEEKRLLEIKD
Ga0181565_106962451	3300017818	Salt Marsh	EKFFESARKHRDNEVVRYFQAEMYIANNEPSKAIKLLKNFIRSNKTSVFSETLLADAYLKISAQDRYQFHRGNVEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181565_107865442	3300017818	Salt Marsh	LKINQDFSSLILAGRVYGELKQVPKAEKFFESARKHRDNEVIRYFQAEMYIANNEPSKAIKLLKNYTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNVEVLKGNHAEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181565_109299351	3300017818	Salt Marsh	WARRYRDNEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRFQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRILEIKD
Ga0181584_106311931	3300017949	Salt Marsh	AEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHSGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFELIDSRVKFVDEEKRLLEIKD
Ga0181584_108816052	3300017949	Salt Marsh	EPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIKD
Ga0181607_107480692	3300017950	Salt Marsh	SKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEALKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181577_107767222	3300017951	Salt Marsh	LAGRVYGELEQVPKAEKFFESARKHRDNEVVRYFLAEMYIANNELSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181577_109486882	3300017951	Salt Marsh	NNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIKD
Ga0181577_109576722	3300017951	Salt Marsh	VRYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0181583_106609912	3300017952	Salt Marsh	EMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHSGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFELIDSRVKFVDEEKRLLEIKD
Ga0181583_108187181	3300017952	Salt Marsh	FTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIKD
Ga0181580_104511331	3300017956	Salt Marsh	NEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHSGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFELIDSRVKFVDEEKRLLEIKD
Ga0181580_108317941	3300017956	Salt Marsh	AEKFFESARKHRDNEVVRYFLAEMYIANNEPSKAIKLLKNYTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNTEALKGNHEEAIKHFNLAKNLTQNKDFFDLIDSREKFVDEEKRLLEIKD
Ga0181571_109281891	3300017957	Salt Marsh	NKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSLVKFVDEEKNLLEIKD
Ga0181582_101157011	3300017958	Salt Marsh	MYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKNLLEIKD
Ga0181582_109232852	3300017958	Salt Marsh	YIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHSGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFELIDSRVKFVDEEKRLLEIKD
Ga0181582_109247651	3300017958	Salt Marsh	MYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEVKD
Ga0181581_107277331	3300017962	Salt Marsh	LLKNYTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNTEALKGNHEEAIKHFNLAKNLTQNKDFFDLIDSREKFVDEEKRLLEIKD
Ga0181590_105197541	3300017967	Salt Marsh	INQDFSSLILAGRVYGELEQVPKAEKFFESARKHRDNEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIKD
Ga0181590_107979632	3300017967	Salt Marsh	SENIEELLKINQDFSSLILAGRVYGDLKQEAKAEKFFESARKHRDNEVVRYFQAEMYIANNEPFKAIKLLKNFTRLNKTSVFSETLLANAYLKISAQDRYQFHRGNAETLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKKLLEIKDQKVIFP
Ga0181590_109966831	3300017967	Salt Marsh	SARKHRDNEVVRYFLAEMYIANNEPSKAIKLLKNYTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNTEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSREKFVDEEKRLLEIKD
Ga0181587_107812902	3300017968	Salt Marsh	KINQDFSSLILAGRVYGELEQVLKAEKFFESARKNRDNEVARYFLAEMYIANNEPSKGIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNVEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181585_109535252	3300017969	Salt Marsh	EVARYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHSGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFELIDSRVKFVDEEKRLLEIKD
Ga0181576_103780032	3300017985	Salt Marsh	TRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEALKGNHEEAIKHFNLAKNLTQNKDFFDLINSRVKFVDEEKRLLEIKD
Ga0181576_107458032	3300017985	Salt Marsh	FSSLILAGRVYGELKQVPKAEKFFESARKHRDNEVIRYFQAEMYIANNEPSKAIKLLKNYTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNVEVLKGNHAEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181576_107766412	3300017985	Salt Marsh	FQTEMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0181569_107724262	3300017986	Salt Marsh	FQTEMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRILEIKD
Ga0181569_109435422	3300017986	Salt Marsh	LKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAELLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIED
Ga0181569_110813891	3300017986	Salt Marsh	RKHRDNEVVRYFQAEMYIANNKPSKSIKLLKNYTRQYKTSFFSETLLADAYLKISAQDRYHFHRGNGEVLKGNHDEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKKLLEIKH
Ga0181601_106350661	3300018041	Salt Marsh	NEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKIFAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181572_105993452	3300018049	Salt Marsh	RLNKTSVFSETLLADAYLKISAQDRYQFHRGNGEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKRLLEIKD
Ga0181553_105520122	3300018416	Salt Marsh	NINEDFSSLILAGRVYGELEQVLKAEKFFESARKHRDNEVVRYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0181558_107259172	3300018417	Salt Marsh	DNEVVRYFQAEMYIANNQPTKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEALKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181567_110322051	3300018418	Salt Marsh	NKTSVFSETLLADAYLKISAQDRYQFHRGNVEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181563_105065071	3300018420	Salt Marsh	EMYVANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0181563_105099472	3300018420	Salt Marsh	NNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEALKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181592_105605442	3300018421	Salt Marsh	PTKAIKLLKNFTRLNKTSVFSETLLADTYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFSLAKNLTQNKDFFDVIDSRLKFVDEEKRLLEIKD
Ga0181592_107176691	3300018421	Salt Marsh	RYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHSGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFELIDSRVKFVDEEKRLLEIKD
Ga0181592_109665732	3300018421	Salt Marsh	LLNINEDFSSLILAGRVYGELKQEAQAEKFFESARKHRDNEVVRYFQAEMYITNNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHHGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0181592_111244211	3300018421	Salt Marsh	AEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIKD
Ga0181593_101464504	3300018423	Salt Marsh	SKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKNLLEIKD
Ga0181593_111031112	3300018423	Salt Marsh	KAEKFFESARKHRDNEVVRYFLAEMYIANNELSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181591_110334591	3300018424	Salt Marsh	RLNKTSVFSETLLADAYLKISAQDRYQFHRGNGEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEERRLLEIGD
Ga0181566_105294881	3300018426	Salt Marsh	PTKAIKLLKNFTRLNKTSVFSETLLADTYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFSLAKNLTQNKDFFDLIDSRLKFVDEEKRLLEIKD
Ga0181566_108553562	3300018426	Salt Marsh	FTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNGEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKRLLEIKD
Ga0181568_106153882	3300018428	Salt Marsh	FQTEMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0181568_110951502	3300018428	Salt Marsh	RYFQAEMYIANNEPTKAIKLLKNFTRLNKTSVFSETLLADTYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFSLAKNLTQNKDFFDVIDSRLKFVDEEKRLLEIKD
Ga0182066_14440551	3300019262	Salt Marsh	NEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDVVDSRLKFVDEEKNLLEIKD
Ga0182061_14009151	3300019266	Salt Marsh	NNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEFKD
Ga0182069_11867052	3300019267	Salt Marsh	NEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0182065_12110852	3300019271	Salt Marsh	LLKINQDFSSLILAGRVYGGLKQVSKAEKFFESARKHRDNEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0182059_10149652	3300019272	Salt Marsh	VARYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNVEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0182059_10217512	3300019272	Salt Marsh	AEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKRLLEIKD
Ga0182059_11603152	3300019272	Salt Marsh	LEQVPKAEKFFESARKHRDNEVVRYFQTEMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKNLLEIKD
Ga0182059_13933031	3300019272	Salt Marsh	ANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRAKFVDEEKRILEIKD
Ga0182067_17042741	3300019276	Salt Marsh	TDLYSKAYKNFLSKKLAKASEYVEELLKINQDFSSLILAGRLYGELKQVPEAEKFFESARKHRDNEVVRYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0182081_13994321	3300019277	Salt Marsh	NEPSKAIKLLKNFTRLNKTSVFSETLLANAYLKISAQDRYQFHRGNAEALKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0182077_13683692	3300019281	Salt Marsh	KAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRAKFVDEEKRILEIKD
Ga0182075_18485041	3300019282	Salt Marsh	IANNEPSKAIKLLKNYTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKNLLEIKD
Ga0194029_10117163	3300019751	Freshwater	EMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRAKFVDEEKRILEIKD
Ga0194022_10096253	3300019937	Freshwater	PSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLINSRVKFVDEEKRLLEIKD
Ga0182086_11927503	3300020013	Salt Marsh	LILAGRVYGELKQEAQAEKFFESAKKHRDNEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRAKFVDEEKRILEIKD
Ga0181595_101963292	3300020053	Salt Marsh	AIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0181575_101185853	3300020055	Salt Marsh	KAEKFFESARKHRDNEVVRYFQTEMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKNLLEIKD
Ga0181599_13297441	3300020178	Salt Marsh	NEPSKAIKLLKNFTKLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0181573_100626284	3300020184	Salt Marsh	AEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0181597_101313783	3300020194	Salt Marsh	EVQAEKFFESARKHRDNEVVRYLQAEMYITNNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRAKFVDEEKRILEIKD
Ga0255775_12787402	3300022907	Salt Marsh	TRLNKTSVFSETLLADTYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFSLAKNLTQNKDFFDVIDSRLKFVDEEKRLLEIKD
Ga0255781_101886011	3300022934	Salt Marsh	YFQTEMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0255770_103570512	3300022937	Salt Marsh	DNEVVRYFLAEMYIANNEPSKAIKLLKNYTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNTEALKGNHEEAIKHFNLAKNLTQNKDFFDLIDSREKFVDEEKRLLEIKD
Ga0255754_102245401	3300022939	Salt Marsh	NEVVRYFQAEMYIANNKPSKSIKLLKNYTRLYKTSFFSETLLADAYLKISAQDRYHFHRGNGEVLKGNHDEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKKLLEIKY
Ga0255764_100663024	3300023081	Salt Marsh	EMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKNLLEIKD
Ga0255764_104496041	3300023081	Salt Marsh	KFFESARKHRDNEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIK
Ga0255764_104736081	3300023081	Salt Marsh	KLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHSGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFELIDSRVKFVDEEKRLLEIKD
Ga0255778_100664554	3300023084	Salt Marsh	DNEVVRYFQTEMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRLKFVDEEKNLLEIKD
Ga0255782_104100022	3300023105	Salt Marsh	IKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAELFKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIED
Ga0255743_101312461	3300023110	Salt Marsh	EVVRYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIKD
Ga0255762_105291871	3300023119	Salt Marsh	KHRDNEVVRYFQAEMYIANNEPSKAIKLLKNFIRSNKTSVFSETLLADAYLKISAQDRYQFHRGNVEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0255762_105604611	3300023119	Salt Marsh	EPSKAIKLLKHFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRMKFVDEEKKLLEIKD
Ga0255766_105017672	3300023172	Salt Marsh	AEKFFESARKHRDNEVVRYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0255776_104496321	3300023173	Salt Marsh	KHRDNEVVRYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0255777_101655901	3300023175	Salt Marsh	EMYIANNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0255777_104744111	3300023175	Salt Marsh	LNKTSVFSETLLADAYLKISAQDRYQFHRGNAEALKGNHEEAIKHFNLAKNLTQNKDFFDLINSRVKFVDEEKRLLEIKD
Ga0255777_106523281	3300023175	Salt Marsh	YKYFLSKELAKATEYIEELLKINQDFSSLVLAGRVYGELKQGAKAEKFFESARKHRDNEVVRYFQAEMYIANNEPSKAIKLLKNFIRSNKTSVFSETLLADAYLKISAQDRYQFHRGNVEVLKGNHEEAIKHFNLAKNLTQNKDFFDLIDSRVKFVDEEKRLLEIKD
Ga0255772_103824121	3300023176	Salt Marsh	EVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIKD
Ga0255772_104665821	3300023176	Salt Marsh	RHRDNEVVRYFQTEMYISNNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0255759_101773711	3300023178	Salt Marsh	NNEPSKAIKLLKNFTRLNKTSVFSEILLADAYLKISAQDRYQFHRGNAEALKGNHKEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKNLLEIKD
Ga0255768_102428001	3300023180	Salt Marsh	FSSLILAGRVYGELEQVPKAEKFFESARKHRDNEVVRYFQAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRYQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVNSRVKFIDEEKKLLEIKD
Ga0233451_102315601	3300024301	Salt Marsh	RDNEVVRYFLAEMYVANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD
Ga0233450_104402862	3300028115	Salt Marsh	YGELEQVLKAEKFFESARKHRDNEVVRYFLAEMYIANNEPSKAIKLLKNFTRLNKTSVFSETLLADAYLKISAQDRHQFHRGNAEVLKGNHEEAIKHFNLAKNLTQNKDFFDLVDSRVKFVDEEKRLLEIKD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088413

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences