Metagenome Family F088395

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088395
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	90 residues
Representative Sequence	MPTKSINIGGQPTDKTTAPVTASPAGDAEFCDSPGAFARFGLRRSLLYELHSLGLIKGVSLRRRGTARGKRLWSIDSIRSYLASQMEAGK
Number of Associated Samples	71
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	21.30 %
% of genes near scaffold ends (potentially truncated)	22.94 %
% of genes from short scaffolds (< 2000 bps)	86.24 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.128 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.688 % of family members)
Environment Ontology (ENVO)	Unclassified (38.532 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.138 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.27% β-sheet: 8.47% Coil/Unstructured: 65.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01807	zf-CHC2	3.67
PF00589	Phage_integrase	3.67
PF06778	Chlor_dismutase	1.83
PF02801	Ketoacyl-synt_C	0.92
PF00202	Aminotran_3	0.92
PF00011	HSP20	0.92
PF09250	Prim-Pol	0.92
PF13548	DUF4126	0.92
PF13155	Toprim_2	0.92
PF13148	DUF3987	0.92
PF04055	Radical_SAM	0.92
PF03772	Competence	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	3.67
COG3253	Coproheme decarboxylase/chlorite dismutase	Coenzyme transport and metabolism [H]	1.83
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG0658	DNA uptake channel protein ComEC, N-terminal domain	Intracellular trafficking, secretion, and vesicular transport [U]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
All Organisms	root	All Organisms	45.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
cellular organisms	root	All Organisms → cellular organisms	44.95 %
Viruses	superkingdom	All Organisms → Viruses	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	25.69 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	25.69 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	11.93 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	8.26 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1.83 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.83 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.92 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.09 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	7.34 %
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1.83 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	1.83 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.09 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	4.59 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	2.75 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.83 %
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1.83 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.83 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.09 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2.75 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.75 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	1.83 %
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1.83 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.83 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.92 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.09 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	2.75 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.75 %
Opitutus terrae	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	1.83 %
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1.83 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.83 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.92 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.09 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	2.75 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.75 %
Opitutus terrae	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	1.83 %
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1.83 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.83 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.92 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16535657	All Organisms → cellular organisms → Bacteria	4107	Open in IMG/M
2088090014\|GPIPI_17452081	All Organisms → cellular organisms → Bacteria	3011	Open in IMG/M
2170459003\|FZ032L002ICKEJ	Not Available	531	Open in IMG/M
2170459019\|G14TP7Y02HXS96	Not Available	645	Open in IMG/M
2228664022\|INPgaii200_c0904374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1571	Open in IMG/M
2228664022\|INPgaii200_c0972676	Not Available	588	Open in IMG/M
2228664022\|INPgaii200_c0974310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1184	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0697363	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1293	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2020601	Not Available	568	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100502074	Not Available	573	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101653628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	517	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101771859	Not Available	1351	Open in IMG/M
3300000550\|F24TB_16312471	Not Available	1485	Open in IMG/M
3300000787\|JGI11643J11755_11728099	Not Available	931	Open in IMG/M
3300000955\|JGI1027J12803_100090776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1842	Open in IMG/M
3300000955\|JGI1027J12803_100351378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	1199	Open in IMG/M
3300000955\|JGI1027J12803_100521100	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300000955\|JGI1027J12803_100741926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	588	Open in IMG/M
3300000955\|JGI1027J12803_100853851	Not Available	1026	Open in IMG/M
3300000955\|JGI1027J12803_101047389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	2040	Open in IMG/M
3300000955\|JGI1027J12803_102111840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1335	Open in IMG/M
3300000955\|JGI1027J12803_102421245	Not Available	586	Open in IMG/M
3300000955\|JGI1027J12803_102929100	Not Available	686	Open in IMG/M
3300000955\|JGI1027J12803_103610833	Not Available	1619	Open in IMG/M
3300000955\|JGI1027J12803_105864891	Not Available	646	Open in IMG/M
3300000956\|JGI10216J12902_118862129	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300002899\|JGIcombinedJ43975_10008786	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300004156\|Ga0062589_101364697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	689	Open in IMG/M
3300004156\|Ga0062589_102026560	Not Available	584	Open in IMG/M
3300004463\|Ga0063356_103386658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300004480\|Ga0062592_101963692	Not Available	577	Open in IMG/M
3300004643\|Ga0062591_100857943	Not Available	846	Open in IMG/M
3300004643\|Ga0062591_102214421	Not Available	572	Open in IMG/M
3300005172\|Ga0066683_10287453	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300005289\|Ga0065704_10521277	Not Available	653	Open in IMG/M
3300005294\|Ga0065705_10188872	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1478	Open in IMG/M
3300005332\|Ga0066388_100000199	All Organisms → cellular organisms → Bacteria	24539	Open in IMG/M
3300005332\|Ga0066388_100511303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1836	Open in IMG/M
3300005332\|Ga0066388_100516288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1829	Open in IMG/M
3300005332\|Ga0066388_103588444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	792	Open in IMG/M
3300005332\|Ga0066388_107227314	Not Available	558	Open in IMG/M
3300005332\|Ga0066388_108438489	Not Available	513	Open in IMG/M
3300005332\|Ga0066388_108720799	Not Available	504	Open in IMG/M
3300005347\|Ga0070668_101102932	Not Available	716	Open in IMG/M
3300005439\|Ga0070711_100523025	Not Available	981	Open in IMG/M
3300005467\|Ga0070706_100376082	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300005468\|Ga0070707_100301083	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1558	Open in IMG/M
3300005598\|Ga0066706_10925859	Not Available	677	Open in IMG/M
3300005764\|Ga0066903_100117789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3676	Open in IMG/M
3300005764\|Ga0066903_100194432	All Organisms → cellular organisms → Bacteria	3021	Open in IMG/M
3300005764\|Ga0066903_100791346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1694	Open in IMG/M
3300005764\|Ga0066903_101025079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1512	Open in IMG/M
3300005764\|Ga0066903_101038249	Not Available	1503	Open in IMG/M
3300005764\|Ga0066903_101175022	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300006046\|Ga0066652_100267644	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300006881\|Ga0068865_102020810	Not Available	523	Open in IMG/M
3300009137\|Ga0066709_100414210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1873	Open in IMG/M
3300009137\|Ga0066709_102456462	Not Available	705	Open in IMG/M
3300009137\|Ga0066709_103389004	Not Available	579	Open in IMG/M
3300010046\|Ga0126384_11608430	Not Available	612	Open in IMG/M
3300010047\|Ga0126382_10581783	Not Available	918	Open in IMG/M
3300010358\|Ga0126370_11875588	Not Available	582	Open in IMG/M
3300010359\|Ga0126376_12084739	Not Available	610	Open in IMG/M
3300010360\|Ga0126372_11118597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	807	Open in IMG/M
3300010361\|Ga0126378_12757942	Not Available	561	Open in IMG/M
3300010376\|Ga0126381_100338846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2074	Open in IMG/M
3300010376\|Ga0126381_100451911	All Organisms → Viruses → Predicted Viral	1802	Open in IMG/M
3300010376\|Ga0126381_100732053	Not Available	1416	Open in IMG/M
3300012198\|Ga0137364_10846844	Not Available	691	Open in IMG/M
3300012199\|Ga0137383_11039053	Not Available	596	Open in IMG/M
3300012200\|Ga0137382_10949608	Not Available	618	Open in IMG/M
3300012205\|Ga0137362_11282505	Not Available	618	Open in IMG/M
3300012208\|Ga0137376_10406735	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300012208\|Ga0137376_10646309	Not Available	914	Open in IMG/M
3300012209\|Ga0137379_10413437	Not Available	1258	Open in IMG/M
3300012211\|Ga0137377_11231047	Not Available	678	Open in IMG/M
3300012353\|Ga0137367_10336037	Not Available	1076	Open in IMG/M
3300012356\|Ga0137371_10906952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	670	Open in IMG/M
3300012357\|Ga0137384_10658082	Not Available	852	Open in IMG/M
3300012361\|Ga0137360_10340974	Not Available	1253	Open in IMG/M
3300012532\|Ga0137373_10058954	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3526	Open in IMG/M
3300014501\|Ga0182024_11831429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	678	Open in IMG/M
3300015371\|Ga0132258_10344898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3680	Open in IMG/M
3300015374\|Ga0132255_103861654	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300016319\|Ga0182033_10897533	Not Available	785	Open in IMG/M
3300018051\|Ga0184620_10299158	Not Available	543	Open in IMG/M
3300018431\|Ga0066655_10261848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1110	Open in IMG/M
3300018482\|Ga0066669_10036505	All Organisms → cellular organisms → Bacteria	2968	Open in IMG/M
3300018482\|Ga0066669_10762440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300020579\|Ga0210407_10000074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	132738	Open in IMG/M
3300021168\|Ga0210406_10058171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	3360	Open in IMG/M
3300021560\|Ga0126371_13649137	Not Available	519	Open in IMG/M
3300022756\|Ga0222622_10005174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5832	Open in IMG/M
3300025463\|Ga0208193_1073204	Not Available	699	Open in IMG/M
3300025910\|Ga0207684_10420833	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300025915\|Ga0207693_10955592	Not Available	656	Open in IMG/M
3300025916\|Ga0207663_10501724	Not Available	943	Open in IMG/M
3300025938\|Ga0207704_11886076	Not Available	514	Open in IMG/M
3300026330\|Ga0209473_1072298	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300027875\|Ga0209283_10847146	Not Available	558	Open in IMG/M
3300031231\|Ga0170824_108191905	Not Available	1221	Open in IMG/M
3300031231\|Ga0170824_112000603	Not Available	873	Open in IMG/M
3300031446\|Ga0170820_14750554	Not Available	853	Open in IMG/M
3300031573\|Ga0310915_10990619	Not Available	587	Open in IMG/M
3300031945\|Ga0310913_10372841	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1011	Open in IMG/M
3300031945\|Ga0310913_10376611	Not Available	1006	Open in IMG/M
3300032001\|Ga0306922_12163113	Not Available	537	Open in IMG/M
3300033405\|Ga0326727_10129058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3114	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.66%
Host-Associated	Host-Associated	6.42%
Engineered	Engineered	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.91%
Plants	Host-Associated → Plants	6.42%
Aquatic	Environmental → Aquatic	2.75%
Solid Waste	Engineered → Solid Waste	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.50%
Sediment	Environmental → Aquatic → Sediment	1.83%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Peat	Environmental → Terrestrial → Peat	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%
Grass	Engineered → Solid Waste → Grass	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.72%
Loam	Environmental → Terrestrial → Soil → Loam	18.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%
Composting	Engineered → Solid Waste → Grass → Composting	0.92%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03308070	2088090014	Soil	MSKKPINAEGDTAKTIAPVTSLANDAEFCDSVGAYDRFGIKRSLLYELHAQGLIRGCSLRRRGLTRGKRLWSIDSIREFLNSQMERGAK
GPIPI_02954970	2088090014	Soil	MPTKSINIGGQPTDKTTAPVTASPAGDAEFCDSPGAFARFGLRRSLLYELHSLGLIKGVSLRRRGTARGKRLWSIDSIRSYLASQMEAGK
E4A_08223120	2170459003	Grass Soil	MSAKSINIGEQLTDKTTAPVTASPANDAEFCDNPGAYVRFGLRRSLLYQLYSEGLIDGVSLRRRGAARGKRLWSCDSIRR
4MG_01937890	2170459019	Switchgrass, Maize And Mischanthus Litter	LLTDENASVTTKPVTASPAFDAEFCDSPGAFERFALRRSHLYQLHKDGLIQGVSLRRRGAARGKRLWSIDSIRSYLESQME
INPgaii200_09043743	2228664022	Soil	MSKMPINAAGDTAKTIAPVQTSPANDAEFCDSLGAYHRFGLKRSLLYELHTQGLIEGVSLRKRGKLRGKRLWSIDSIRAFLKSQMRRELR
INPgaii200_09726761	2228664022	Soil	MPLDTKKLGRQLTDKTTAPVVASPASDAEFCDSPGAFQRFGLRRSLLYELHKLGLIQGVSLRRRGALRGKRLWNCDSIRSYLHEQMEA
INPgaii200_09743102	2228664022	Soil	MTVKSDNAGGNAQNTVAPVTAFPANDAEFCDSPGAFVRFGVRRSLLYELYAQGLIKGVSLRRRGAARGKRLWSIDSIRSYLTSQMENTK
ICChiseqgaiiDRAFT_06973632	3300000033	Soil	VKSTSYNIGGQSTDKTTSPVAASSAGDAEFCDSPGAFQRFGLRRSLLYELHKLGLIQGVSLRRRGALRGKRLWNCDSIRSYLHEQMEAGK*
ICChiseqgaiiDRAFT_20206011	3300000033	Soil	MVISNKRNIGGQQTETTTDPVQASPAFDAEFCDSPGAFYRFGMRRSLLYELHAEGLIDGCSLRRRGKQRGKRLWSIPSIRAYLATQMDGRAVK*
INPhiseqgaiiFebDRAFT_1005020742	3300000364	Soil	MQTSISVGGQTDTTTTAPVTASPDSNAEFCDTPSAYTRFGLRRSLLYELLRQNLIAGVSLRRRGALRGKRLWSIDSIRRYLVSQMEGGK*
INPhiseqgaiiFebDRAFT_1016536281	3300000364	Soil	MLLDIKKIGRQETDKTTXPVXASXXXDAXFCDSPGAFQRFGLRRSLLYELHKLGLIKGVSLRRRGTARGKRLWSIDSIRSYLRAQMDGRAAK*TRTPHQEKR
INPhiseqgaiiFebDRAFT_1017718591	3300000364	Soil	MLLDTKFGEQITETTTAPVQASPAFEAEFCDNGGAYLRFGIRRSLLYQLHKEGLIDGVSLRRRGAARGKRLWSCDSIRRYLASQMEAGK*
F24TB_163124713	3300000550	Soil	MPTKSINIGAQPTDKTTGPVTASPAGDAEFCDSPGAFARFGLRRSLLYELHSLGLIKGVSLRRRGTARGKRLWSIDSIRXXXXXXXXXVK*
JGI11643J11755_117280992	3300000787	Soil	MNSIDYKAEGGTAKTTHPVAAWPANHAEFCDSPGAYHLFGLKRSKLYELSASGAIKGVSLRKRGATKGKRLWSCDSIRSYLASQMESKEAGQAS*
JGI1027J12803_1000907763	3300000955	Soil	MSKKPINAEGDTAKTIAPVTSLANDAEFCDSVGAYDRFGIKRSLLYELHAQGLIRGCSLRRRGLTRGKRLWSIDSIREFLNSQMERGAK*
JGI1027J12803_1003513783	3300000955	Soil	MSKKPINAAGETAKTIAPVQASPVNDAEFCDNPGAFVRFGLKRSFLYGLYEQGLIKGVSLRKRGAARGKRLWSIDSIRSYLASQMGSVE*
JGI1027J12803_1005211002	3300000955	Soil	MNSIDYKAEGGTAKITHPVAAWPANHAEFCDSPGAYHLFGLKRSKLYELSASGAIKGVSLRKRGATKGKRLWSCDSIRSYLASQMESKEAGQAS*
JGI1027J12803_1007419261	3300000955	Soil	MTSIESGGHPATTAPVQASPANDAEFCDSPGAFLRFGLRRSLLYELHAQGLIQGVSLRRRGAARGKRLWSIDSIRSYLASQMESTK*
JGI1027J12803_1008538512	3300000955	Soil	MTWWCVGILVCLVKSTRTKIGRQPTDKTTAPVAASPASDAEFCDSSGAFARFGLGRTLLYELKGLGLIEGVSLRRRGAARGKRLWSIDSIRSYLASQMDKGAAP*
JGI1027J12803_1010473892	3300000955	Soil	MTVKSDNAGGNAQNTVAPVTAFPANDAEFCDSPGAFVRFGVRRSLLYELYAQGLIKGVSLRRRGAARGKRLWSIDSIRSYLTSQMENTK*
JGI1027J12803_1021118403	3300000955	Soil	MSRTPINAGGETAKTIAPVQASPANDAEFCDSLGAFVRFGLRRSLLYELYAQGLIKGVSLRRRGAARGKRLWSIDSIRSYLHDQMEVAK*
JGI1027J12803_1024212452	3300000955	Soil	MPINAAGDTAKTIAPVQTSPANDAEFCDSLGAYHRFGLKRSLLYELHTQGLIEGVSLRKRGKLRGKRLWSIDSIRAFLKSQMRRELR*
JGI1027J12803_1029291002	3300000955	Soil	MHSIDYTNAEGGTAHTTAPVAASPASDAEFCDSPGAFYRFGLRRSMLYELDARGLIKSCSLRKRGATKGKRLWNCDSIRTYLSSQMHGAQ*
JGI1027J12803_1036108334	3300000955	Soil	MSLDTKKIGQQKTEKTTAPVTASPASDAEFCDSLGAFARFGLRRSLLYDLHAHGHIQGVSLRRRGAQRGKRLWSVDSIRSYLAAQMEGGKE*
JGI1027J12803_1058648912	3300000955	Soil	MLLDIKKIGRQETDKTTAPVIASLASDAEFCDSPGAFQRFGLRRSLLYELHHLGLIKGVSLRRRGTTRGKRLWSIDSIRD
JGI1027J12803_1075257771	3300000955	Soil	SQKTETTTNPVEASPDNDAEFCDSPGAFHRFGMRRSLLYELRAEGLIDGCSLRRKGRQRGKRLWSVPSI
JGI10216J12902_1188621291	3300000956	Soil	NKRIRDERTETVTTNPITASPTNGAAAEFCDSGGAFLRFGLRRSLLYDLHKLGLIKGVSLRRRGTARGKRLWSIDSIRKYLASQMENERK*
JGIcombinedJ43975_100087863	3300002899	Soil	MLKNSINAAGETAKTIAPVQASAANDAEFCDSPGAFVRFGLRRSLLYELYALGLIKGVSLRRRGAARGKRLWSIDSIRSYLREEMETAK*
Ga0062589_1013646971	3300004156	Soil	HIMVSTRSSSRQLSDYTTSPVTVSPANDAEFCDSPGAFFRFGLKRSMLYELKARGLIKGVSLRKRGATKGKRLWSCDSIRSYLASQMESKEAGQAS*
Ga0062589_1020265602	3300004156	Soil	MPKNSINAEGGTAHTIAPVTASPANDAEFCDSPGAFARFGLRRSLLYELHAEGAIKGVSLRRRGAMRGKRLWSIDSIRCYLASQMSSAI
Ga0063356_1033866581	3300004463	Arabidopsis Thaliana Rhizosphere	GILLLSVMKCKIADNGGRQRTATTTAPVAASPVSDAEFCDCAGAFARFGLRRSLLYELHSLGLIKGVSLRRRGAARGKRLWSIDSIRSYLESQMENGGRA*
Ga0062592_1019636921	3300004480	Soil	MAVMKNSHDKGGNARLTIAPLAASAANDAEFCDSPGAFCRFGLRRSMLYALSARGLIKGVSLRKRGAMKGKRLWSCDSIRSYLASQMEGDNEAT*
Ga0062591_1008579431	3300004643	Soil	MKNSYDKGGNTRITIAPLAASAANDAEFCDSPGAFCRFGLRRSMLYALSARGLIKGVSLRKRGAMKGKRLWSCDSIRSYLASQMEGDNEAT*
Ga0062591_1022144211	3300004643	Soil	MRKTSSQKHGGQQTATTTAPVQASLVNDAEFCDCAGAFARFGLRRSLLYELHSLGLIKGVSLRRRDTARGKRLWSIDSIRSYLHEQMGATK*
Ga0066683_102874532	3300005172	Soil	MSIPSNNSGGHPQTIAPVTTSLSNDTEFCDSPGAFLRFGLKRSMLYELNARGLIKGCSLRKRGATKGKRLWSCDSIRSYLASAMKDAK*
Ga0065704_105212771	3300005289	Switchgrass Rhizosphere	MSAKSINKVGGQITDKTTAAVTASPANDVEFCDSPGAFLRFGLRRSLLYELHAEGLIQGVSLRRRGSVRGKRLWSIDSIRKYLASQMQNGGDA*
Ga0065705_101888722	3300005294	Switchgrass Rhizosphere	MSAKSINKVGGQITDKTTAAVTASPANDVEFCDSPGAFLRFGLRRSLLYELHAEGLIQGVSLRRRGTARGKRLWSIDSIRSYLNSQMNGRATK*
Ga0066388_1000001994	3300005332	Tropical Forest Soil	MKHSDRKLGRQLTDKTTALAQASPASDAEFCDSPGAFRRFGLRRSLLYDLHALGLIKGVSLRRRGTTRGKRLWSIDSIRSYLTSQMEGGDEIP*
Ga0066388_1005113032	3300005332	Tropical Forest Soil	MTAKSKDAGGNARVTIAPVAASPANDAEFCDSPGAFHRFGLKRSMLYDLSARGLIKGVSLRKVGSTKGKRLWACDSIRTYLLSQMESLK*
Ga0066388_1005162882	3300005332	Tropical Forest Soil	VKSTSQNIGWQPTDKTTAPVTASPFFDAEFCDSPGAFHRFARKRTYLYELERLGLIRGVSLRKKGAARGKKLWSIASIRAYLESQMKNEGEG*
Ga0066388_1035884442	3300005332	Tropical Forest Soil	MSKKPTNAGGETAKTIAPVKASPANDAEFCDSPGAFARFGLRRSLLYDLHSKRYIRGVSLRKRGTTRGKRLWSIDSIRSYLGSQMDAAIEGGGK*
Ga0066388_1072273142	3300005332	Tropical Forest Soil	MNSNDKVGNARLTIAPLAASAANDAEFCDSPGAFHRFGLKRSMLYALSGRGLIKGVSLRKRGSSKGKRLWSCDSIRAFLHKQMEGDNEAT*
Ga0066388_1084384891	3300005332	Tropical Forest Soil	MSLDTEKLQKLGEQIAEKTAAPVQASPASEAEFCDNGGAYLRFGIRRSLLYQLHKEGLIDGVSLRRRGAARGKRLWSCDSIRRYLASQMKGAK*
Ga0066388_1087207991	3300005332	Tropical Forest Soil	MPAKSINIGGQLTEQTTAPVQASPAYDAEFCDCAGAFARFGLKRSLLYELHSLGLIKGVSLRRRGTARGKRLWSIDSIRSYLASQMENGGDAK*
Ga0070668_1011029322	3300005347	Switchgrass Rhizosphere	MKRTSDTKIGGQRTDKTTAPVTASPASDAEFCDSPGAFARFGLRRSLLYELHSLGLIKGVSLRRRGAARGKRLWSIDSIRSYLDSQMDATAAK*
Ga0070711_1005230251	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDSKKIGGEPTDTTTLPVTPSPANDGEFCDSPRAFQRFGLRRSLLYALAAEGHIAGCSLRRRGRQRGKRLWSIDSIRRYLASQMDGRAVK*
Ga0070706_1003760822	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLANSLRNGGYSETTAPVTASPANDAEFCDSGGAFVRFGLRRSLLYDLHALGLIKGVSLRRRGAARGKRLWSIDSIRLYLASQMESGK*
Ga0070707_1003010833	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRVDTKTSGMSNNISNIAVSGTAKTTAPVEASPANDAEFCDSPGAFVRFGLRRSLLYDLYGQGLIRGVSLRRRGAARGKRLWSIDSIRCYLASQMDSAKEVRNEAH*
Ga0066706_109258592	3300005598	Soil	MSNSNNKGGNVRLTIAPLAASAANDAEFCDSPGAFYRFGLRRSMLYELSARGLIKGCSLRKRGA
Ga0066903_1001177894	3300005764	Tropical Forest Soil	MAVMKNSPDKGGNARLTIAPLAVSAANDAEFCDSPGAFYRFGLKRSMLYELSARGLIRGVSLRKRGSSKGKRLWSCDSIRAYLTSQMENPK*
Ga0066903_1001944321	3300005764	Tropical Forest Soil	MPAKSINNGGRKTDRTTEPIAASPASDAEFCDSPGAFQRFGLRRSLLYELHSLGLIRGVSLRRRGAARGKRLWSIDSIRSYLNSQME
Ga0066903_1007913463	3300005764	Tropical Forest Soil	MVLAMPKNSINAAGDTAKTIAPVQASPVNDAEFCDSPGAFLRFGLRRSLLYELDADGLIKGVSLRRRGAARGKRLWSIDSIRSYLASQMDSTIEGGAK*
Ga0066903_1010250792	3300005764	Tropical Forest Soil	VKTLSNKKSGGQQTANTTAPVQASPANGADAEFCDSLGAFLRFGLRRSLLYELHHLGLIKGVSLRRRGTARGKRLWSIESIRAYLAAQMDNGGEAK*
Ga0066903_1010382492	3300005764	Tropical Forest Soil	MSKMSLDTKKIGRQETDKTTAPVTASPASDAEFCDSPGAFARFGLRRSLLYELHHLGLIKGVSLRRRGTARGKRLWSIDSIRDYLVSQMENGSEP*
Ga0066903_1011750221	3300005764	Tropical Forest Soil	MSKMSLDTKKIGRQETGKTTAPVIASPVSDAEFCDSPGAFYRFGLRRSLLYELHHLGLIKGVSLRRRGAARGKRLWSIDSIRAYLASQMENGGTA*
Ga0066652_1002676442	3300006046	Soil	MPTKSINIGGQLTDKTTAPIAVSPVNDAEFCDSFGAFVRFGLRRSLLYELHAQGLIRGCSLRRRGAVRGKRLWSIDSIRSYLASQMDGRATP*
Ga0068865_1020208102	3300006881	Miscanthus Rhizosphere	MSLDTKKIGGEPTDTTTLPVTPSPAHDGEFCDSPGAFQRFGLRRSLLYALAADGHIAGCSLRRRGRQRGKRLWSIASIRRYLASQMEADK*
Ga0066709_1004142101	3300009137	Grasslands Soil	MSNSNNKGGNVRLTIAPLAASAANDAEFCDSPGAFYRFGLRRSMLYELSARGLIKGCSLRKRGATKGKRLWSCDSIRAYIASQIEA
Ga0066709_1024564622	3300009137	Grasslands Soil	MSTKSIDLGGQLTEKTTAPVAASPANDAEFCDSPGAFLRFGLRRSLLYELHAQGLIQGVSLRRRGAARGKRLWSIDSIRSYLASQMQGAK*
Ga0066709_1033890041	3300009137	Grasslands Soil	MPRKFIGERQTETTTAPVQASPANDAEFCDCAGAFARFGLKRSLLYELHALGLIKGVSLRRRGTARGKRLWSIDSIRSYLQSQMERAE*
Ga0126384_116084301	3300010046	Tropical Forest Soil	MAVMKNSPDKGGNARLTIAPLAVSAANDAEFCDSPGAFCRFGLKRSMLYELSARGLIRGVSLRKRGSSKGKRLWSCDSIRAYLTSQMENPK*
Ga0126382_105817832	3300010047	Tropical Forest Soil	MLQKAISTGGHPKTTALVQASPANDAEFCDSLGAFVRFGLRRSLLYDLNAQGLIKGMSLRRRGAARGKHFGASDSIRSYLASQMEAAK*
Ga0126370_118755881	3300010358	Tropical Forest Soil	MSKMSLDVKKIGRQETDKTTALLIASPASDAEFCDSPGAFARFGLRRSLLYELHHLGLIKGVSLRRRGTARGKRLWSIDSIRDYLVSQMENGSEP*
Ga0126376_120847392	3300010359	Tropical Forest Soil	LVKTTSHLGRRQTDITTVPVQASPAYDAEFCDCAGAFARFGLRRSLLYELHSLGLIKGVSLRRRGTARGKRLWSIDSIRAYLASQMENGGRA*
Ga0126372_111185971	3300010360	Tropical Forest Soil	MNSNDKGDNARLTIAPLAASAANDAEFCDSPGAFYRFGLKRSMLYELSARGLIRGVSLRKRGSSKGKRLWSCDSIRAYLTSQMENPK*
Ga0126378_127579422	3300010361	Tropical Forest Soil	MSKNINNFAEGGTAQTIAPVQASPANDAEFCDSLGAFVRFGLRRSLLYDLYAQGLIKGVSLRRRGAVRGKRLWSIDSIRAYLREEMEAAK
Ga0126381_1003388462	3300010376	Tropical Forest Soil	MSSNTINGGGGHPQITIAPVQASPANDAEYCDSFGAFVRFGLRRSLLYDLHAQGLIKGVSLRRRGAARGKRLWSIDSIRSYLASQMEVAK*
Ga0126381_1004519113	3300010376	Tropical Forest Soil	MISAGGKTETTTAPVKASPAYDAEFCDCAGAFARFGLKRSLLYELHSLGLIKGVSLRRRGTARGKRLWSIDSIRNYLASQMEGAK*
Ga0126381_1007320532	3300010376	Tropical Forest Soil	VKSTSQKIGWQPTDKTTAPVTASPFFDAEFCDSPGAFHRFALKRTYLYQLERLGLIRGVSLRKKGAARGKKLWSIASIRAYLESQMKNEGEG*
Ga0137364_108468442	3300012198	Vadose Zone Soil	VHIQVDTKMSGMSNNISNIAVSGTAKTTVPVQASPVNDAEFCDSPGAFLRFGLRRSLLYDLYGHGLIRGVSLRRRGAARGKRLWSIDSIRCYLASQMDSAIEGGTK*
Ga0137383_110390533	3300012199	Vadose Zone Soil	AVMKNSYDTGGNARRTIAPVTASPANDAEFCDSPGAFHRFGLKRSLLYELSARGLIKGVSLRKRGATKGKRLWSCDSIRAYLAKQMQGAQ*
Ga0137382_109496082	3300012200	Vadose Zone Soil	MSLDTEKLQKLGEQIAEKTAAPVQASPASEAEFCDNGGAYLRFGIRRSLLYQLHKEGLIDGVSLRRRGAARGKRLWSCDSI
Ga0137362_112825052	3300012205	Vadose Zone Soil	MKNSNDKGGNARLTIAPLAASAANDAEFCDSPGAFYRFGLKRSMLYELSARGLIKGISLRKRGAAKGKRLWSCDSIRTYLSSQMKAAK*
Ga0137376_104067351	3300012208	Vadose Zone Soil	MKKTSNVGAQSDMTTAPVVASPLNDAEFVDSPGAFVRFGLRRSLLYALHREGLISGVSLRRKGTVRGKRLWSCDSIREFLRRQMETENETS*
Ga0137376_106463092	3300012208	Vadose Zone Soil	MRISKSRRQPDLTTAPVSASPVNGAEWCDSPGAKELFGLKRSMLYELLARGAIAGCSLRKRGAVKGKRLWNCDSIRRYLQSQMERAK*
Ga0137379_104134373	3300012209	Vadose Zone Soil	MKNSYDTGGNARRTIAPVTASPANDAEFCDSPGAFHRFGLKRSLLYELSARGLIKGVSLRKRGATKGKRLWSCDSIRAYLAKQMQGAQ*
Ga0137377_112310472	3300012211	Vadose Zone Soil	MKKTSNVGAQSDMTTAPVVASPLNDAEFVDSPGAFVRFGLRRSLLYALHREGLISGVSLRRKGTVRGKRLWSCDSIREFLLRQMETDNETS*
Ga0137367_103360372	3300012353	Vadose Zone Soil	MPAKSIDLGGQRTEQTTAPVQASPANDAEFCDSPGAFARFGLKRTLLYELHSLGLIKGVSLRRRGKTRGKRLWSIDSIRSYLNSQMDNGGAP*
Ga0137371_109069522	3300012356	Vadose Zone Soil	MKNSNDKGGNAQLTIAPLAASAANDAEFCDSPGAFYRFGLRRSLLYDLHAQGLIEGVSLRRRGAARGKRLWSIDSIRSYLAAQMESATK*
Ga0137384_106580822	3300012357	Vadose Zone Soil	MKNSYDTGGNARRTIAPVTASPANDAEFCDSPGAFHRFGLKRSLLYELSARGLIKGVSLRKRGATKGKRLWSCDSIRAY
Ga0137360_103409742	3300012361	Vadose Zone Soil	MPAKSIDLGGQRTEQTAAPVQASPANDAEFCDSPGAFIRFGLRRSLLYDLYAQGLIKGVSLRRRGAARGKRLWSIDSIRSYLASQMDTAK*
Ga0137373_100589543	3300012532	Vadose Zone Soil	MKGSSKQTGEQITGLTTAPVSASPENDAEFCDCKGAFSRFGLRRSLLYELHSLGLIKGVSLRRRGAVRGKRLWSVDSIRAFLREQMEGSNGAG*
Ga0182024_118314292	3300014501	Permafrost	MTPNVTDAAGGTAQTTAPIAVSSAPDAEFCDSPGAKARFGLGRTYLYQLLEQGLIKGVSLRKRGQTKGKRLWYVDSIRRYLHSQMEAGN*
Ga0132258_103448986	3300015371	Arabidopsis Rhizosphere	MSLDSNKIGRQETDKTTAPVTVSPASDAEFCDSPGAFARFGLRRSLLYELHHLGLIKGVSLRRRGTTRGKRLWSIDSIRDYLVSQMENGGES*
Ga0132255_1038616541	3300015374	Arabidopsis Rhizosphere	MPLDTKKLGGKQTDKTTSPVTASPTSDAEFCDSPGAFARFGLRRSLLYELHSLGLIKGVSLRRRGMARGKRLWSIDSIRAYLVSQMENGGEAQ*
Ga0182033_108975331	3300016319	Soil	VKSTSYKIGRRETEQTTAAVTASPAYDAEFCDCAGAFARFGLKRSLLYELHGLGLIKGVSLRRRGTARGKRLWSIDSIRSYLASQMENEGEA
Ga0184620_102991582	3300018051	Groundwater Sediment	MPLDTKKLGGQLTDKTTAPVIASPAFDAEFCDSSGAFARFGLRRSLLYELHHLGLIKGVSLRRRRAPRGKRLWSIDSI
Ga0066655_102618482	3300018431	Grasslands Soil	MSIPSNNSGGHPQTIAPVTTSLSNDTEFCDSPGAFLRFGLKRSMLYELNARGLIKGCSLRKRGATKGKRLWSCDSIRSYLASAMKDAK
Ga0066669_100365051	3300018482	Grasslands Soil	MSLDTKKLGEQITEKTTAPVTASPANDAEFCDSSGAFVRFGLRRSLLYELHAQGLIQGVSLRRRGAARGKRLWSIGSIRSFLAAQMEIAE
Ga0066669_107624403	3300018482	Grasslands Soil	MAKSINIGGQLNDKITAPIAALPGNDAEFCDSPGAFWRFGLRRSMLYELNARGLIKGVSLRKRGATKGKRLWNCDSIRAYLASQIEAGK
Ga0210407_1000007419	3300020579	Soil	MVLDTKKLGGQLTEKTTAPVAASQANDAEFCDSPGAFMRFGLRRSLLYDLHALGLIRGVSLRRRGAQRGKRLWDVASIRTYLSSQMEASK
Ga0210406_100581714	3300021168	Soil	MAKSINIGAQLTDKTTAPVAASSGNDAEFCDSSGAFMRFGLRRSLLYDLHALGLIRGVSLRRRGAQRGKRLWDVASIRTYLSSQMEASK
Ga0126371_136491372	3300021560	Tropical Forest Soil	MAVMKNSHDKGGNARLTIAPLAASAANDAEFCDSPGAFYRFGLKRSMLYELSARGLIRGVSLRKRGSSKGKRLWSCDSIRAYLTSQME
Ga0222622_100051744	3300022756	Groundwater Sediment	MPLDTKKLGGQLTDKTTAPVIASPAFDAEFCDSSGAFARFGLRRSLLYELHHLGLIKGVSLRRRGAPRGKRLWSIDSIRSYLASQMENGGQA
Ga0208193_10732042	3300025463	Peatland	YFRPAVPIKSPMPVQEENKMGGNALTVAPVQASPSNDAEFCDSRGAERRFGLKRSLLYELLAEGLIRGVSLRRRGQMKGKRLWNCDSIRTYLNAQMQEQ
Ga0207684_104208332	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLANSLRNGGYSETTAPVTASPANDAEFCDSGGAFVRFGLRRSLLYDLHALGLIKGVSLRRRGAARGKRLWSIDSIRLYLASQMESGK
Ga0207693_109555922	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTSNVGAQSDMTTAPVVASPLNDAEFVDSPGAFLRFGLRRSLLYALHREGLISGVSLRRKGTVRGKRLWSCDSIRTFLRRQIETDNETS
Ga0207663_105017242	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDSKKIGGEPTDTTTLPVTPSPANDGEFCDSPRAFQRFGLRRSLLYALAAEGHIAGCSLRRRGRQRGKRLWSIDSIRRYLASQMDGRAVK
Ga0207704_118860761	3300025938	Miscanthus Rhizosphere	MSLDTKKIGGEPTDTTTLPVTPSPAHDGEFCDSPGAFQRFGLRRSLLYALAADGHIAGCSLRRRGRQRGKRLWSIASIRRYLASQMEADK
Ga0209473_10722983	3300026330	Soil	HPQTIAPVTTSLSNDTEFCDSPGAFLRFGLKRSMLYELNARGLIKGCSLRKRGATKGKRLWSCDSIRSYLASAMKDAK
Ga0209283_108471462	3300027875	Vadose Zone Soil	MPAKSINTVGGQTTDEITAPVAASPANDAEFCDSPGAFLRFGLRRSLLYELHAQGLIQGVSLRRRGAARGKRLWSIASIRSYLASQMQGAKLMHTG
Ga0170824_1081919052	3300031231	Forest Soil	VKSTSLEIGGQLTDRTTATLRASTSGEAEFCDSDGAFARFGLGRPLLYELLNLGLIKGCSLRRHGALRGKRLWSIESIRGYLESQMDGGGHERAS
Ga0170824_1120006031	3300031231	Forest Soil	MSKKTDNAGGDTAKTIAPVQASPANDVEFCDNPGAFVRFGLKRSLLYELYAQGLIKGVSLRRRGAARGKRLWSIDSIRSYLREQMEAAK
Ga0170820_147505542	3300031446	Forest Soil	MSAKSINKIGGQITNTTTAAVTASPANDVEFCDSPGAFVRFGLRRSLLYDLYGQGLIKGVSLRRRGAARGKRLWSIDSIR
Ga0310915_109906192	3300031573	Soil	VKSTSYKIGRRETEQTTAAVTASPAYDAEFCDCAGAFARFGLKRSLLYELHGLGLIKGVSLRRRGTARGKRLWSIDSIRSYLASQMENEGEAT
Ga0310913_103728412	3300031945	Soil	SSSKKIRDQRSETTAPVAASPASDAEFCDSPGAFQRFALRRSHLYQLHKDGLVKGVSLRRCGAARGKRLWSIDSIRSYLASQMDTKRKDL
Ga0310913_103766111	3300031945	Soil	MPAKSINLGGQLTEQTTAPVQASPANDAEFCDCPGAFLRFGLRRSLLYELHKLGLIKGVSLRRRGTTRGKRLWSIDSIRSYLASQMEEDR
Ga0306922_121631131	3300032001	Soil	VKTTSHKIGGRETETTTAPVQASPAFDAEFCDSPGAFVRFGLRRSLLYQLHAEGLIHGCSLRRKGRQRGKRLWSIASIRSYLVQMEDGE
Ga0326727_101290582	3300033405	Peat Soil	MSLDTHNAEDGTAYTTDPVQASLANDAEFCDSYGAKARFGLGRTYLYQLLEQGLISGVSLRKRGARTGKRLWCVDSIRRYLHSQMGVN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088395

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences