Metagenome / Metatranscriptome Family F088262

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088262
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	82 residues
Representative Sequence	MATPTTVYISPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA
Number of Associated Samples	71
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.78 %
% of genes near scaffold ends (potentially truncated)	22.02 %
% of genes from short scaffolds (< 2000 bps)	71.56 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.303 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (21.101 % of family members)
Environment Ontology (ENVO)	Unclassified (87.156 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (41.284 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00248	Aldo_ket_red	11.93
PF00441	Acyl-CoA_dh_1	6.42
PF00072	Response_reg	4.59
PF16736	sCache_like	4.59
PF02852	Pyr_redox_dim	3.67
PF00486	Trans_reg_C	3.67
PF02771	Acyl-CoA_dh_N	2.75
PF07992	Pyr_redox_2	2.75
PF13187	Fer4_9	1.83
PF02782	FGGY_C	1.83
PF02633	Creatininase	1.83
PF13426	PAS_9	0.92
PF13489	Methyltransf_23	0.92
PF00856	SET	0.92
PF03681	Obsolete Pfam Family	0.92
PF02472	ExbD	0.92
PF03544	TonB_C	0.92
PF13304	AAA_21	0.92
PF00202	Aminotran_3	0.92
PF07690	MFS_1	0.92
PF03699	UPF0182	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	9.17
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	1.83
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.92
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.92
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.30 %
Unclassified	root	N/A	36.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.30 %
Unclassified	root	N/A	36.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.30 %
Unclassified	root	N/A	36.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	12.84 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.83 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.70 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.83 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.92 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.92 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.92 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.92 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.92 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.92 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.92 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.92 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.92 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.92 %
Granulicella tundricola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.92 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.92 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.92 %
Granulicella tundricola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.92 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10015890	All Organisms → cellular organisms → Bacteria	4808	Open in IMG/M
3300000567\|JGI12270J11330_10082865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1502	Open in IMG/M
3300004477\|Ga0068971_1434051	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005994\|Ga0066789_10438499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	545	Open in IMG/M
3300007982\|Ga0102924_1057596	Not Available	2215	Open in IMG/M
3300009518\|Ga0116128_1158403	Not Available	645	Open in IMG/M
3300009518\|Ga0116128_1204909	Not Available	553	Open in IMG/M
3300009519\|Ga0116108_1210032	Not Available	571	Open in IMG/M
3300009522\|Ga0116218_1433586	Not Available	586	Open in IMG/M
3300009630\|Ga0116114_1109975	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300009644\|Ga0116121_1016004	All Organisms → cellular organisms → Bacteria	2418	Open in IMG/M
3300009645\|Ga0116106_1029613	All Organisms → cellular organisms → Bacteria → Acidobacteria	1887	Open in IMG/M
3300009646\|Ga0116132_1173770	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300009672\|Ga0116215_1316461	Not Available	678	Open in IMG/M
3300010339\|Ga0074046_10049854	All Organisms → cellular organisms → Bacteria	2785	Open in IMG/M
3300010359\|Ga0126376_13218438	Not Available	505	Open in IMG/M
3300010379\|Ga0136449_102765335	Not Available	694	Open in IMG/M
3300014151\|Ga0181539_1046140	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300014152\|Ga0181533_1085366	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300014153\|Ga0181527_1148214	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300014155\|Ga0181524_10109058	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300014155\|Ga0181524_10168605	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300014155\|Ga0181524_10319168	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300014156\|Ga0181518_10082323	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300014156\|Ga0181518_10202037	Not Available	1033	Open in IMG/M
3300014159\|Ga0181530_10356792	Not Available	753	Open in IMG/M
3300014159\|Ga0181530_10390119	Not Available	711	Open in IMG/M
3300014164\|Ga0181532_10390327	Not Available	774	Open in IMG/M
3300014199\|Ga0181535_10572376	Not Available	649	Open in IMG/M
3300014638\|Ga0181536_10069076	Not Available	2168	Open in IMG/M
3300014638\|Ga0181536_10233412	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300016422\|Ga0182039_10548469	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300017823\|Ga0187818_10552698	Not Available	519	Open in IMG/M
3300017925\|Ga0187856_1081727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	1322	Open in IMG/M
3300017929\|Ga0187849_1029382	All Organisms → cellular organisms → Bacteria	2861	Open in IMG/M
3300017934\|Ga0187803_10356393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300017935\|Ga0187848_10223328	Not Available	802	Open in IMG/M
3300017935\|Ga0187848_10273453	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300017938\|Ga0187854_10157586	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300017938\|Ga0187854_10397504	Not Available	578	Open in IMG/M
3300017941\|Ga0187850_10480036	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300017972\|Ga0187781_10001297	All Organisms → cellular organisms → Bacteria → Acidobacteria	18889	Open in IMG/M
3300017972\|Ga0187781_10005692	All Organisms → cellular organisms → Bacteria	9213	Open in IMG/M
3300017972\|Ga0187781_10212620	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300017972\|Ga0187781_10398134	Not Available	983	Open in IMG/M
3300017973\|Ga0187780_11446266	Not Available	507	Open in IMG/M
3300017975\|Ga0187782_10052598	All Organisms → cellular organisms → Bacteria	2965	Open in IMG/M
3300017975\|Ga0187782_10142465	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300017975\|Ga0187782_10608915	Not Available	839	Open in IMG/M
3300017975\|Ga0187782_10616496	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300017996\|Ga0187891_1126350	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300017998\|Ga0187870_1194860	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300018002\|Ga0187868_1114808	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300018005\|Ga0187878_1200716	Not Available	745	Open in IMG/M
3300018009\|Ga0187884_10036367	All Organisms → cellular organisms → Bacteria → Acidobacteria	2405	Open in IMG/M
3300018016\|Ga0187880_1110097	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300018022\|Ga0187864_10390762	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300018023\|Ga0187889_10052096	All Organisms → cellular organisms → Bacteria → Acidobacteria	2185	Open in IMG/M
3300018033\|Ga0187867_10049196	All Organisms → cellular organisms → Bacteria → Acidobacteria	2542	Open in IMG/M
3300018033\|Ga0187867_10422706	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300018035\|Ga0187875_10180931	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300018038\|Ga0187855_10591736	Not Available	646	Open in IMG/M
3300018043\|Ga0187887_10027937	All Organisms → cellular organisms → Bacteria	3576	Open in IMG/M
3300018062\|Ga0187784_10383453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1137	Open in IMG/M
3300018062\|Ga0187784_10793327	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	756	Open in IMG/M
3300018062\|Ga0187784_11596141	Not Available	517	Open in IMG/M
3300018085\|Ga0187772_10422177	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300018086\|Ga0187769_10040535	All Organisms → cellular organisms → Bacteria	3201	Open in IMG/M
3300018088\|Ga0187771_10013885	All Organisms → cellular organisms → Bacteria	5896	Open in IMG/M
3300018088\|Ga0187771_10710310	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300018088\|Ga0187771_11494667	Not Available	573	Open in IMG/M
3300018088\|Ga0187771_11938057	Not Available	500	Open in IMG/M
3300018090\|Ga0187770_10011268	All Organisms → cellular organisms → Bacteria	5722	Open in IMG/M
3300018090\|Ga0187770_10074819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2487	Open in IMG/M
3300018090\|Ga0187770_10444993	Not Available	1021	Open in IMG/M
3300018090\|Ga0187770_11020427	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300018090\|Ga0187770_11022638	Not Available	665	Open in IMG/M
3300019275\|Ga0187798_1032095	Not Available	564	Open in IMG/M
3300019278\|Ga0187800_1070658	Not Available	548	Open in IMG/M
3300019284\|Ga0187797_1785987	Not Available	525	Open in IMG/M
3300022557\|Ga0212123_10109363	Not Available	2230	Open in IMG/M
3300023090\|Ga0224558_1013672	All Organisms → cellular organisms → Bacteria	4622	Open in IMG/M
3300025439\|Ga0208323_1048456	Not Available	776	Open in IMG/M
3300025459\|Ga0208689_1082815	Not Available	590	Open in IMG/M
3300027625\|Ga0208044_1086336	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300027825\|Ga0209039_10149341	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300027854\|Ga0209517_10091400	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300027854\|Ga0209517_10313208	Not Available	912	Open in IMG/M
3300032069\|Ga0315282_10017893	All Organisms → cellular organisms → Bacteria	10188	Open in IMG/M
3300032401\|Ga0315275_10779459	Not Available	1061	Open in IMG/M
3300032892\|Ga0335081_10932075	Not Available	1020	Open in IMG/M
3300033402\|Ga0326728_10006905	All Organisms → cellular organisms → Bacteria	29985	Open in IMG/M
3300033402\|Ga0326728_10009241	All Organisms → cellular organisms → Bacteria	23854	Open in IMG/M
3300033402\|Ga0326728_10011614	All Organisms → cellular organisms → Bacteria	19985	Open in IMG/M
3300033402\|Ga0326728_10018410	All Organisms → cellular organisms → Bacteria	13775	Open in IMG/M
3300033402\|Ga0326728_10386654	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300033402\|Ga0326728_10653429	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300033405\|Ga0326727_11242662	Not Available	514	Open in IMG/M
3300033977\|Ga0314861_0000009	All Organisms → cellular organisms → Bacteria	374132	Open in IMG/M
3300033977\|Ga0314861_0001164	All Organisms → cellular organisms → Bacteria	36177	Open in IMG/M
3300033977\|Ga0314861_0002991	All Organisms → cellular organisms → Bacteria	16731	Open in IMG/M
3300033977\|Ga0314861_0023268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3841	Open in IMG/M
3300033977\|Ga0314861_0075659	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300033977\|Ga0314861_0242856	Not Available	832	Open in IMG/M
3300033977\|Ga0314861_0374895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300033977\|Ga0314861_0378405	Not Available	623	Open in IMG/M
3300033982\|Ga0371487_0150706	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300033983\|Ga0371488_0094375	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.13%
Aquatic	Environmental → Aquatic	45.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.95%
Freshwater	Environmental → Aquatic → Freshwater	44.04%
Peat	Environmental → Terrestrial → Peat	9.17%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.83%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	42.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	34.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	10.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.17%
Lake	Environmental → Aquatic → Freshwater → Lake	1.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	33.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	32.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.26%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.92%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	21.10%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	18.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	12.84%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	10.09%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	8.26%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.26%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	8.26%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004477	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100158902	3300000567	Peatlands Soil	MATPTTVYISPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPSDFDARAFAALVREANASMDRSIAKLDETLTFLDKFQEANA*
JGI12270J11330_100828652	3300000567	Peatlands Soil	VATPTTVYITAQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA*
Ga0068971_14340513	3300004477	Peatlands Soil	ATPTTVYISPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPSDFDARAFAALVREANASMDRSIAKLDETLTFLDKFQEANA*
Ga0066789_104384991	3300005994	Soil	MATPTTVYINPQQRKRLFQRAKRRKSSFSEELREAIDLYLDLPPGIDKESLAALAKEANASLIRSIAMLDTMSKRVETTGNKLAEI
Ga0102924_10575963	3300007982	Iron-Sulfur Acid Spring	MVMVSPTTIYIRPDQRKKLFSRARKRGTSFSEELRSAVDFYLGLPPDLDPKALAGLAREANQALDRSLAQLDETLAFLAKHRNSQK*
Ga0116128_11584032	3300009518	Peatland	MATPTTVYINPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIAKLDETLAFLEKFREAKV*
Ga0116128_12049092	3300009518	Peatland	MATPTTVYITPQQRKRLFQRARRRKTTFSDELRSALDLYLDLPPDFDAESFAALIREANASMDRSIAKLDETLTFLEKFQEAKA*
Ga0116108_12100321	3300009519	Peatland	MATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPSDFDAEAFAALVREANASMDRSIGKLDETLTFLETFQEAKA*
Ga0116218_14335862	3300009522	Peatlands Soil	MATPTTVYISPRQRKRLVQRARRRKTSFSDELRTALDLYLDLPSDFDARAFAALVREANASMDRSIAKLDETLTFLDKFQEANA*
Ga0116114_11099751	3300009630	Peatland	MATPTTVYITPQQRKRLFQRARRRKTTFSDELRSALDLYLDLPPDFDAESFAALIREANASMDRSIAKLD
Ga0116121_10160044	3300009644	Peatland	VYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKS*
Ga0116106_10296131	3300009645	Peatland	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAGAFAALVREANASMDRSIGKLDETLTFLETFQEAKA*
Ga0116132_11737702	3300009646	Peatland	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPSDFDAEAFAALVREANASMDRSIGKLDETLTFLETFQEAKA*
Ga0116215_13164612	3300009672	Peatlands Soil	VYITPQKRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLDKFQEANA*
Ga0074046_100498542	3300010339	Bog Forest Soil	VYIRPKQRKQLFQRARRRNTSFSEELRAAVDFYLDLPLDFDERAFAALVREANASMDRSIAKLDETLAFLEKFREAKV*
Ga0126376_132184381	3300010359	Tropical Forest Soil	MATPTTIYITSKQRKALFARARKRRTSFSEELRSAVNLYLELSPDLDEVALATLVKEANASMERSTAKL
Ga0136449_1027653351	3300010379	Peatlands Soil	LFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA*
Ga0181539_10461403	3300014151	Bog	MATPTTVYISPQQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIAKLDETLAFLEKFREAKV*
Ga0181533_10853662	3300014152	Bog	MATPTTVYINTKQRKQLFQRARRRKTSFSEELRAAVDFYLDLPPDFDEKAFAALVREANASMDRSIAKLDETLTFLEKFREAKA*
Ga0181527_11482143	3300014153	Bog	MATPTTVYISPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPADFDAEAFAALVQEANASMDRSIARLDETLTFLERFREAKA*
Ga0181524_101090583	3300014155	Bog	MATPTTVYISPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPADFDAEAFAALVQEANASMDRSIAKLDETLTFLERFREAKA*
Ga0181524_101686051	3300014155	Bog	MATPTTVYISPQQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIAKLDETLAFLEKFREAEV*
Ga0181524_103191682	3300014155	Bog	VYINPKQRKQLSQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIAKLDETLTFLEKFREAKA*
Ga0181518_100823231	3300014156	Bog	VYITPQQRKKLFQRARRRKTSFSDELRTALDLYLDLPSDFDAEAFAALVREANASMDRSIAKLDETLTFLETFQEARA*
Ga0181518_102020372	3300014156	Bog	MATPTTVYINPKQRKQLFQRARRRKTSFSEELRAAVDFYLDLPPDFDEKAFAALVREANASMDRSIAKLDETLTFLEKFREAKA*
Ga0181530_103567922	3300014159	Bog	MATPTTVYINPKQRKQLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIAKLDETLTFLEKFREAKA*
Ga0181530_103901191	3300014159	Bog	MATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPSDFDAQAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA*
Ga0181532_103903271	3300014164	Bog	VYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFGALVQEANASMDRSIAKLDETLTFLEKFQEAKA*
Ga0181535_105723762	3300014199	Bog	VYITPQQRKRLFQRARQRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA*
Ga0182010_106345901	3300014490	Fen	MATPTTIYIHPQQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDKDAFATLVQDAYASLNRSIARI
Ga0181536_100690763	3300014638	Bog	MATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDGEAFAALVREANASMDRSIAKLDETLTFLERFREAKA*
Ga0181536_102334123	3300014638	Bog	QRKQLFQRARRRKTSFSEELRAAVDFYLDLPPDFDEKAFAALVREANASMDRSIAKLDETLTFLEKFREAKA*
Ga0182039_105484691	3300016422	Soil	MAATPTTIYINPRQRKRLFDRARKRKTSFSEELRSAVDLYLELPPGFDGRELGALAEEAKASMDRSAARL
Ga0187818_105526981	3300017823	Freshwater Sediment	MATPTTVYISPRQRRRLFQLARRRQTSFSEELRAALDFYLDLPQDFDAQAFAALVREANASMDRSIAKLDETLSFLEKFREAKA
Ga0187856_10817272	3300017925	Peatland	MATPTTVYINPKQRKQLFQRARRRKTSFSEELRAAVDFYLDLPPDFDEKAFAALVREANASMDRSIAKLDETLTFLEKFREAKA
Ga0187849_10293822	3300017929	Peatland	MATPTTVYINPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIAKLDETLAFLEKFREAKV
Ga0187803_103563932	3300017934	Freshwater Sediment	MATPTTVYINPKQRKQLFQRARRRNTSFSEELRAAVDFYLDFPSDFDERAFAALVREANASMDRSIAKLDETLTFLERFREAKA
Ga0187848_102233282	3300017935	Peatland	MATPTTVYISPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPADFDAEAFAALVQEANASMDRSIARLDETLSFLEKFREAKT
Ga0187848_102734532	3300017935	Peatland	MATPTTVYITPQQRKRLFQRARRRKTTFSDELRSALDLYLDLPPDFDAESFAALIREANASMDRSIAKLDETLTFLGKFQEAKA
Ga0187854_101575862	3300017938	Peatland	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPSDFDAEAFAALVREANASMDRSIGKLDETLTFLETFQEAKA
Ga0187854_103975042	3300017938	Peatland	MATPTTVYITPQQRKRLFQRARRRKTTFSDELRSALDLYLDLPPDFDAESFAALIREANASMDRSIAKLDETLTFLEKFQEAKA
Ga0187850_104800362	3300017941	Peatland	MATPTTVYLNPQQRKRLFQRARRRKSSFSEELREAIDLYLDFPPDIDRESLAALAKEANASLNRSIAKLD
Ga0187781_100012975	3300017972	Tropical Peatland	MATSTTVYISPIQRKRLFQRARRRKTSFSEELRTALDFYLDLPPDFDAQALAALVREANASMDRSIAKLDETLSFLAKYREANA
Ga0187781_100056925	3300017972	Tropical Peatland	MATATTVYLSPKQRKRLFQRARRRKTTFSEELRAALDFYLDLPADFDAESFAALVREANASMDRSIAKLDETLTFLAKFREAKA
Ga0187781_102126203	3300017972	Tropical Peatland	MATPTTVYIKSSQRKRLFQRARRRNTSFSEELRTALDFYLDLPSDFDEKAFAAMVREANASMDRSIAKLDETLAFLEKFREAKA
Ga0187781_103981343	3300017972	Tropical Peatland	VATPTTVYLTPQQRKKLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA
Ga0187780_114462661	3300017973	Tropical Peatland	MATPTTVYINPKQRKRLFQRARRRKTSFSEELRAAVDFYLDLPPDFDEKAFAALVHEANASMDRSIAKLDETLT
Ga0187782_100525983	3300017975	Tropical Peatland	MATPTTVYINPKQRKRLFQRARRRKTSFSEELRAAVDFYLDLPPNFDEKAFAALVREANASMDRSIAKLDETLTFLEKFREA
Ga0187782_101424653	3300017975	Tropical Peatland	MATPTTVYISPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA
Ga0187782_106089153	3300017975	Tropical Peatland	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPADFDAEAFAALVREANASMDRSIAKLVETLNFLEKYREAKVRVWSRIFLRV
Ga0187782_106164961	3300017975	Tropical Peatland	MATATTVYISPRQRKGLFARARRRKSSFSEELREAIDLYLDLPPDFDKDSLAALAKEANASLDRSIARL
Ga0187891_11263504	3300017996	Peatland	PKQRKQLFQRARRRKTSFSEELRAAVDFYLDLPPDFDEKAFAALVREANASMDRSIAKLDETLTFLEKFREAKA
Ga0187870_11948602	3300017998	Peatland	MATPTTVYINPKQRKQLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAVAALVREANASMDRSIAKLDETLAFLEKFREAKV
Ga0187868_11148082	3300018002	Peatland	MATPTTVYINPKQRKQLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIAKLDETLTFLEKFREAKA
Ga0187878_12007161	3300018005	Peatland	MATPTTVYIGPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDEKAFAALVREANASMDRSIAKLDETLTFLEKFREAKA
Ga0187884_100363672	3300018009	Peatland	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPSDFDAQAFAALVREANASMDRSIAKLDETLTFLDKFQEANA
Ga0187880_11100972	3300018016	Peatland	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAGAFAALVREANASMDRSIGKLDETLTFLETFQEAKA
Ga0187864_103907621	3300018022	Peatland	MATPTTVYISPQQRKRLFHRARRRSTSFSEELRAALDFYLDLPPDFDQQAFSILVQEAQASLERGIARLDAMSKRVKTTG
Ga0187889_100520962	3300018023	Peatland	MATPTTVYINPKQRKQLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIAKLDETLAFLEKFREAKV
Ga0187867_100491962	3300018033	Peatland	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFGALVQEANASMDRSIAKLDETLTFLEKFQEAKA
Ga0187867_104227062	3300018033	Peatland	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPSDFDAEAFAALVREANASMDRSIGKLDETLTFLETFQE
Ga0187875_101809312	3300018035	Peatland	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLETFQEAKA
Ga0187855_105917362	3300018038	Peatland	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA
Ga0187887_100279371	3300018043	Peatland	QQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA
Ga0187784_103834533	3300018062	Tropical Peatland	MQEDPVATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDADAFAALVREANASMDRSIAKLDETLTFLEKFQEAEA
Ga0187784_107933271	3300018062	Tropical Peatland	MATAPNPATALTLQQRRRLSSRARRRRTSFSQELREAVDIYLDLPSEIDRKALATLVREANASLDRSIAKLDDTLDYLAKFREAGA
Ga0187784_115961412	3300018062	Tropical Peatland	MATPTTVYISPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPAEFDAEAFAALVREANASMDRSIAKLDETLAFLEKFQEAKA
Ga0187772_104221773	3300018085	Tropical Peatland	VATPTTVYITAQQRKRLFQRARRRKTSFSDELRAALDLYLDLPPDFDAESFTALVREANASMDRSIAKLDETLTFLEKFQEATA
Ga0187769_100405352	3300018086	Tropical Peatland	MATPTTVYINPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDEKAFAALVREANASMDRSIAKLDETLTFLENFREAKA
Ga0187771_100138852	3300018088	Tropical Peatland	MATPTTVYINGRQRKRLFQRARWRKTSFSEELRAALDFYLDLPPDFDDKAFAALVREANASMDRSIAKLDETLAFLEKFREAKA
Ga0187771_107103102	3300018088	Tropical Peatland	MATPTTVYISPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPGFDEKAFAALVREANASMGRSLAKLDETLTFLEKFQEAKA
Ga0187771_114946672	3300018088	Tropical Peatland	VATPTTVYITPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIARLDETLTFLAQFQEAKV
Ga0187771_119380571	3300018088	Tropical Peatland	MATPTTVYISPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDEKAFAALVREANASMDRSIAKLDETLTFLEKFREAKA
Ga0187770_100112685	3300018090	Tropical Peatland	MATPTTVYINPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDEKAFAVLVREANASMDRSIAKLDETLTFLENFREAKA
Ga0187770_100748192	3300018090	Tropical Peatland	MATPTTVYINGRQRKRLFQRARWRKTSFSEELRAALDFYLDLPPDFDEKAFAALVREANASMDRSIAKLDETLAFLEKFREAKA
Ga0187770_104449931	3300018090	Tropical Peatland	VATPTTVYITPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLAKFQEAKV
Ga0187770_110204271	3300018090	Tropical Peatland	MATPTTVYINPTQRRRLFQRARRRKTSFSEELRTALDFYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLSFLAK
Ga0187770_110226381	3300018090	Tropical Peatland	TPTTVYISPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVSEANASMDRSIAKLDETLTFLEKFREAKA
Ga0187798_10320952	3300019275	Peatland	ATPTTVYISPRQRSRLFQRARRRKTSFSEELRAALDLYLDLPPDFDAEAFAGLVREANASMDRSIAKLDETLTFLEKFQEGKA
Ga0187800_10706581	3300019278	Peatland	ATPTTVYITPRQRKRLFQRARQRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLAKFQEAKV
Ga0187797_17859871	3300019284	Peatland	NPVATPTTVYITPRQRKRLFQRARRRKTSFSDELRTALDLYFDLPPDFDAEAFAALVREANASMDRSIAKLDKTLTFLEKYQEGKG
Ga0212123_101093633	3300022557	Iron-Sulfur Acid Spring	MVSPTTIYIRPDQRKKLFSRARKRGTSFSEELRSAVDFYLGLPPDLDPKALAGLAREANQALDRSLAQLDETLAFLAKHRNSQK
Ga0224558_10136726	3300023090	Soil	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKS
Ga0208323_10484562	3300025439	Peatland	MATPTTVYINPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIAKLDET
Ga0208689_10828153	3300025459	Peatland	INPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIAKLDETLAFLEKFREAKV
Ga0208044_10863361	3300027625	Peatlands Soil	MATPTTVYISPRQRKRLFQRARRRKTSFSDELRTALDLYLDLPSDFDARAFAALVREANASMDRSIAKLDETLTFLDKFQEANA
Ga0209039_101493412	3300027825	Bog Forest Soil	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIEKLDETLTFLEK
Ga0209517_100914002	3300027854	Peatlands Soil	VATPTTVYITAQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA
Ga0209517_103132083	3300027854	Peatlands Soil	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEALAALVREANASMDRSIAKLDETLTFLEKFQEANA
Ga0315282_100178936	3300032069	Sediment	MATPTTVYINPKQRKRLFQRARRRKTTFSEELRVALDFYLDLPPDFDARAFAALVREANASMDRSIAKLDETLSFLEKYREARA
Ga0315275_107794591	3300032401	Sediment	MASPTTIYLTPKQRKGLFRRARKRKTSFSEEVRAALDWYLEFPPDFEEERLAALVQEANASMDRSIGKLDEAIAFCKQTMERINELERR
Ga0335081_109320753	3300032892	Soil	VATATTVYITPQQRKRLFQRARRRKTSFSDELRKALDLYLDLPWDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA
Ga0326728_100069056	3300033402	Peat Soil	VYLNPKQRKRLFQRAHRRKTSFSEELRAALDFYLDLPLDFDEQAFAALVREANASMDRSIAKLDETLAFLEKFREAKV
Ga0326728_1000924116	3300033402	Peat Soil	VATPTTVYITPQQRKRLFQRARRRKTSFSDELRSALDLYLDLPPDFDAQAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA
Ga0326728_100116147	3300033402	Peat Soil	MATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPSDFDAQAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA
Ga0326728_100184106	3300033402	Peat Soil	MATATTVYISPNQRKRLFQRARRRKTNFSEESRAALDFYLDLPPDFHAEAFAALLREANASMDRSIAKLDETLTFFEKYRREARQWTI
Ga0326728_103866543	3300033402	Peat Soil	MATPTTVYITPKQRKQLFQRARRRKTSFSEELRAALDFYLDLPPDFDERAFAALVREANASMDRSIVKLDETLAFLEKFREAKV
Ga0326728_106534292	3300033402	Peat Soil	MSTPTTVYINPKQRKRLFQRARRRKTSFSEELRAALDFYPDLPPDFDEKAFAALVREANASMDRSIAKLDKTLAFLEKFREARA
Ga0326727_112426621	3300033405	Peat Soil	MATPTTVYITPQQRKRLFQRARRRKTSFSDELRTALDLYLDLPPDFDAEAFAALVREANASMDRSIAKLDETLTFLEKFREAKT
Ga0314861_0000009_204002_204256	3300033977	Peatland	MATPTTVYIDPTQRRRLFQRARRRKTSFSEELRAALDFYLDLPPAFDAEAFAALVREANASMDRSIAKLDETLTFLEKFREAKA
Ga0314861_0001164_18835_19089	3300033977	Peatland	MATPTTVYINPNQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDEKALAALVREANASMDRSIAKLDETLTFLEKFREGKA
Ga0314861_0002991_8591_8845	3300033977	Peatland	MATPTTVYINPMQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDEKAFGALVREANASMDRSIAKLDETLTFLGKFREAKA
Ga0314861_0023268_2044_2298	3300033977	Peatland	MATPTTVYISPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDFDEKAFAALVREANASMDRSIARLDETLTFLEKFREAKG
Ga0314861_0075659_1_255	3300033977	Peatland	MATPTTVYINSRQRKRLFQRARRRNTSFSEELRAALDFYLDLPPDFDEKALAALVREANASMDRSIAKLDETLAFLEKFREAKA
Ga0314861_0242856_458_712	3300033977	Peatland	MATPTTVYINSRQRKRLFQRARRRKTSFSEELRAAVDFYLDLPPDFDEKAFAALVREANASMDRSIAKLDETLAFLEKFREAKA
Ga0314861_0374895_14_259	3300033977	Peatland	VYISPKQRKRLFQRARRRKTSFSEELRAALDFYLDLPPDIDEKAFAALVREANASMDRSIAKLDETLTFLEKFREAKPKFL
Ga0314861_0378405_8_262	3300033977	Peatland	MATPTTVYIKASQRKRLFQRARRRNTSFSEELRTALDFYLDLPSDFDEKAFAALVREANASMDRSIAKLDETLAFLEKFREARA
Ga0371487_0150706_84_338	3300033982	Peat Soil	MATATTVYISPNQRKRLFQRARRRKTNFSEESRAALDFYLDLPLDFDEQAFAALVREANASMDRSIAKLDETLAFLEKFREAKV
Ga0371488_0094375_526_762	3300033983	Peat Soil	VYITPQQRKRLFQRARRRKTSFSDELRSALDLYLDLPPDFDAQAFAALVREANASMDRSIAKLDETLTFLEKFQEAKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088262

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences