NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F088159

Metagenome Family F088159

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088159
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 50 residues
Representative Sequence MMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Number of Associated Samples 81
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.06 %
% of genes near scaffold ends (potentially truncated) 38.53 %
% of genes from short scaffolds (< 2000 bps) 89.91 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (74.312 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(28.440 % of family members)
Environment Ontology (ENVO) Unclassified
(89.908 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(82.569 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 69.81%    β-sheet: 0.00%    Coil/Unstructured: 30.19%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF00149Metallophos 20.18
PF12850Metallophos_2 14.68
PF07733DNA_pol3_alpha 2.75
PF07012Curlin_rpt 2.75
PF07068Gp23 1.83
PF05221AdoHcyase 1.83
PF08443RimK 1.83
PF13439Glyco_transf_4 1.83
PF03797Autotransporter 0.92
PF07691PA14 0.92
PF01041DegT_DnrJ_EryC1 0.92
PF104171-cysPrx_C 0.92
PF00670AdoHcyase_NAD 0.92
PF01467CTP_transf_like 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0499S-adenosylhomocysteine hydrolaseCoenzyme transport and metabolism [H] 2.75
COG0587DNA polymerase III, alpha subunitReplication, recombination and repair [L] 2.75
COG2176DNA polymerase III, alpha subunit (gram-positive type)Replication, recombination and repair [L] 2.75
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.92
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.92
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.92
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.92
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.92
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.92


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.31 %
All OrganismsrootAll Organisms25.69 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000756|JGI12421J11937_10027136All Organisms → Viruses → Predicted Viral2076Open in IMG/M
3300000756|JGI12421J11937_10138808Not Available613Open in IMG/M
3300003411|JGI25911J50253_10089345Not Available961Open in IMG/M
3300004686|Ga0065173_1010332Not Available1725Open in IMG/M
3300004807|Ga0007809_10195024All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage586Open in IMG/M
3300005580|Ga0049083_10034773All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas marina1795Open in IMG/M
3300005581|Ga0049081_10040288All Organisms → cellular organisms → Bacteria → Proteobacteria1774Open in IMG/M
3300005581|Ga0049081_10229964Not Available656Open in IMG/M
3300005581|Ga0049081_10286214Not Available571Open in IMG/M
3300005582|Ga0049080_10064116Not Available1262Open in IMG/M
3300005582|Ga0049080_10075529Not Available1154Open in IMG/M
3300006072|Ga0007881_1082357Not Available813Open in IMG/M
3300006100|Ga0007806_1008194Not Available2551Open in IMG/M
3300006108|Ga0007862_1034174All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1085Open in IMG/M
3300009068|Ga0114973_10182434Not Available1153Open in IMG/M
3300009151|Ga0114962_10061976Not Available2423Open in IMG/M
3300009152|Ga0114980_10350684Not Available851Open in IMG/M
3300009154|Ga0114963_10402230Not Available742Open in IMG/M
3300009155|Ga0114968_10121219All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1579Open in IMG/M
3300009158|Ga0114977_10167489Not Available1302Open in IMG/M
3300009159|Ga0114978_10244188Not Available1117Open in IMG/M
3300009159|Ga0114978_10244607Not Available1116Open in IMG/M
3300009159|Ga0114978_10403666All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria817Open in IMG/M
3300009159|Ga0114978_10813800Not Available526Open in IMG/M
3300009161|Ga0114966_10471676Not Available720Open in IMG/M
3300009163|Ga0114970_10342427Not Available842Open in IMG/M
3300009163|Ga0114970_10381372Not Available787Open in IMG/M
3300009164|Ga0114975_10209360Not Available1100Open in IMG/M
3300009180|Ga0114979_10464833Not Available734Open in IMG/M
3300009183|Ga0114974_10164454Not Available1379Open in IMG/M
3300009183|Ga0114974_10586718Not Available616Open in IMG/M
3300009185|Ga0114971_10815316Not Available505Open in IMG/M
3300010158|Ga0114960_10179785Not Available1117Open in IMG/M
3300010885|Ga0133913_12587351Not Available1232Open in IMG/M
3300010885|Ga0133913_12802341Not Available1174Open in IMG/M
3300012006|Ga0119955_1179490Not Available538Open in IMG/M
3300012013|Ga0153805_1024962All Organisms → Viruses → Predicted Viral1017Open in IMG/M
3300013004|Ga0164293_10108834All Organisms → Viruses → Predicted Viral2115Open in IMG/M
3300013004|Ga0164293_10204912Not Available1422Open in IMG/M
3300013004|Ga0164293_10789466Not Available603Open in IMG/M
3300013094|Ga0164297_10002314Not Available19037Open in IMG/M
3300013372|Ga0177922_10541700Not Available704Open in IMG/M
3300014819|Ga0119954_1030607Not Available1007Open in IMG/M
3300017723|Ga0181362_1064824Not Available746Open in IMG/M
3300017761|Ga0181356_1200885Not Available590Open in IMG/M
3300017777|Ga0181357_1096689All Organisms → cellular organisms → Bacteria → Proteobacteria1122Open in IMG/M
3300017778|Ga0181349_1016354All Organisms → cellular organisms → Bacteria → Proteobacteria3043Open in IMG/M
3300019784|Ga0181359_1181731Not Available694Open in IMG/M
3300020141|Ga0211732_1352084Not Available581Open in IMG/M
3300020151|Ga0211736_10793803All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria759Open in IMG/M
3300020159|Ga0211734_10089837Not Available858Open in IMG/M
3300020159|Ga0211734_10950415Not Available590Open in IMG/M
3300020160|Ga0211733_10529813Not Available1291Open in IMG/M
3300020162|Ga0211735_10966559Not Available692Open in IMG/M
3300020513|Ga0208090_1041569Not Available602Open in IMG/M
3300020556|Ga0208486_1044734All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria650Open in IMG/M
3300020560|Ga0208852_1047698Not Available719Open in IMG/M
3300020561|Ga0207934_1063783Not Available617Open in IMG/M
3300021963|Ga0222712_10605273All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria632Open in IMG/M
3300022602|Ga0248169_135504Not Available2530Open in IMG/M
3300022748|Ga0228702_1089250Not Available743Open in IMG/M
3300023179|Ga0214923_10067352All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2595Open in IMG/M
3300023179|Ga0214923_10510817All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria588Open in IMG/M
3300023179|Ga0214923_10528751Not Available573Open in IMG/M
3300023184|Ga0214919_10300603All Organisms → Viruses → Predicted Viral1107Open in IMG/M
3300023184|Ga0214919_10324221Not Available1045Open in IMG/M
3300023184|Ga0214919_10815599Not Available507Open in IMG/M
3300024346|Ga0244775_10318591Not Available1287Open in IMG/M
3300025357|Ga0208383_1010434All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1172Open in IMG/M
3300025383|Ga0208250_1015651All Organisms → Viruses → Predicted Viral1338Open in IMG/M
3300025383|Ga0208250_1027590All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage915Open in IMG/M
3300025407|Ga0208378_1014816Not Available1527Open in IMG/M
3300025418|Ga0208253_1056075Not Available655Open in IMG/M
3300027608|Ga0208974_1042416Not Available1332Open in IMG/M
3300027608|Ga0208974_1083178Not Available873Open in IMG/M
3300027608|Ga0208974_1120495Not Available686Open in IMG/M
3300027608|Ga0208974_1131866Not Available646Open in IMG/M
3300027631|Ga0208133_1160851Not Available517Open in IMG/M
3300027659|Ga0208975_1147929Not Available656Open in IMG/M
3300027732|Ga0209442_1101474Not Available1159Open in IMG/M
3300027734|Ga0209087_1112992Not Available1135Open in IMG/M
3300027734|Ga0209087_1261088All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria635Open in IMG/M
3300027736|Ga0209190_1359511Not Available535Open in IMG/M
3300027754|Ga0209596_1033526All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae2867Open in IMG/M
3300027754|Ga0209596_1130011Not Available1145Open in IMG/M
3300027756|Ga0209444_10060410All Organisms → Viruses → Predicted Viral1672Open in IMG/M
3300027756|Ga0209444_10190699Not Available751Open in IMG/M
3300027759|Ga0209296_1145936All Organisms → Viruses → Predicted Viral1069Open in IMG/M
3300027770|Ga0209086_10135432Not Available1211Open in IMG/M
3300027782|Ga0209500_10033400Not Available2879Open in IMG/M
3300027782|Ga0209500_10066466Not Available1870Open in IMG/M
3300027797|Ga0209107_10068762Not Available1957Open in IMG/M
3300028393|Ga0304728_1265098Not Available569Open in IMG/M
3300032665|Ga0316221_1009669All Organisms → cellular organisms → Bacteria → Proteobacteria5792Open in IMG/M
3300033995|Ga0335003_0320421Not Available689Open in IMG/M
3300034018|Ga0334985_0474387Not Available728Open in IMG/M
3300034082|Ga0335020_0340585Not Available729Open in IMG/M
3300034082|Ga0335020_0381005Not Available681Open in IMG/M
3300034093|Ga0335012_0350345Not Available735Open in IMG/M
3300034102|Ga0335029_0211049Not Available1281Open in IMG/M
3300034102|Ga0335029_0534844All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria672Open in IMG/M
3300034102|Ga0335029_0629814Not Available595Open in IMG/M
3300034105|Ga0335035_0468090Not Available697Open in IMG/M
3300034111|Ga0335063_0588569Not Available526Open in IMG/M
3300034120|Ga0335056_0178948Not Available1239Open in IMG/M
3300034279|Ga0335052_0097034All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1780Open in IMG/M
3300034283|Ga0335007_0256899All Organisms → Viruses → Predicted Viral1172Open in IMG/M
3300034284|Ga0335013_0367366Not Available895Open in IMG/M
3300034356|Ga0335048_0168133Not Available1238Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake28.44%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater23.85%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater10.09%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic10.09%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake8.26%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater8.26%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater2.75%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment2.75%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.83%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater0.92%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.92%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.92%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000756Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011EnvironmentalOpen in IMG/M
3300003411Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SDEnvironmentalOpen in IMG/M
3300004686Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)EnvironmentalOpen in IMG/M
3300004807Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07EnvironmentalOpen in IMG/M
3300005580Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRFEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300006072Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09EnvironmentalOpen in IMG/M
3300006100Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09EnvironmentalOpen in IMG/M
3300006108Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009185Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaGEnvironmentalOpen in IMG/M
3300010158Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaGEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300012006Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101BEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013094Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaGEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300014819Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011AEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020141Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020513Freshwater microbial communities from Lake Mendota, WI - 20JUL2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020556Freshwater microbial communities from Lake Mendota, WI - 03AUG2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020560Freshwater microbial communities from Lake Mendota, WI - 18JUN2009 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300020561Freshwater microbial communities from Lake Mendota, WI - 22APR2009 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022602Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnionEnvironmentalOpen in IMG/M
3300022748Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MGEnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025357Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)EnvironmentalOpen in IMG/M
3300025383Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)EnvironmentalOpen in IMG/M
3300025407Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)EnvironmentalOpen in IMG/M
3300025418Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027631Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027732Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027756Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027770Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027797Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300028393Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300032665Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007EnvironmentalOpen in IMG/M
3300033995Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056EnvironmentalOpen in IMG/M
3300034018Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021EnvironmentalOpen in IMG/M
3300034082Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088EnvironmentalOpen in IMG/M
3300034093Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034105Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127EnvironmentalOpen in IMG/M
3300034111Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186EnvironmentalOpen in IMG/M
3300034120Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172EnvironmentalOpen in IMG/M
3300034279Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M
3300034284Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075EnvironmentalOpen in IMG/M
3300034356Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12421J11937_1002713633300000756Freshwater And SedimentMKQHKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI*
JGI12421J11937_1013880813300000756Freshwater And SedimentMMKQRKLVDALYRACLAHDAEKISKLRKLEFDKIFKHRAQGKPF
JGI25911J50253_1008934513300003411Freshwater LakeMMKQHKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI*
Ga0065173_101033223300004686FreshwaterMMKQRKLVHALYRACLEHDAEKINKLRKKEFAKIFRHRAEGKPFNAKWTVVKI*
Ga0007809_1019502423300004807FreshwaterMKQRKLVNALYRACLEHDAEKIQELKMLEFRKIFKHRAQGKPFNAKWTVVKI*
Ga0049083_1003477323300005580Freshwater LenticMMKQHKLVDALYRACLDHDAKKINKLRKLEFDKIFKHRAQGKPFNAKWTVVSI*
Ga0049081_1004028833300005581Freshwater LenticMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPF
Ga0049081_1022996413300005581Freshwater LenticKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI*
Ga0049081_1028621433300005581Freshwater LenticMMKQRKLVDALYRACLAHDAEKISKLRKLEFDKIFKHRAQGKPFNAKWTVVS
Ga0049080_1006411613300005582Freshwater LenticMMKQYKLVDALYRACLDHDAKKINKLRKLEFDKIFKHRAQGKPFNAKWTVVSI*
Ga0049080_1007552923300005582Freshwater LenticLYRACLDHDAKKINKLRKLEFDKIFKHRAQGKPFNAKWTVVSI*
Ga0007881_108235713300006072FreshwaterMKQRKLVTALYRACLEHDAEKIQELKILEFRKIFKHRAQGKPFNAKWTVVKI*
Ga0007806_100819413300006100FreshwaterMMKQRKLVHALYRACLEHDAEKIQELKMLEFRKIFKHRAQGKPFNAKWTVVKI*
Ga0007862_103417423300006108FreshwaterMKQRKLVNALYRACLEHDAEKIQELKMLEFRKIFKHRAEGKPFNAKWTVVKI*
Ga0114973_1018243413300009068Freshwater LakeRKLVTALYSACLDHDAEKIGKLRRLEFAKIFKHRAQGKPFNAKWTVVKF*
Ga0114962_1006197613300009151Freshwater LakeMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVKI*
Ga0114980_1035068423300009152Freshwater LakeMMKQRKLVDALYRACLAHDAEKIGKLRRLEFGKIFKHRAQGKPFNAKWTVVKI*
Ga0114963_1040223023300009154Freshwater LakeMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAEGKPFNAKWTVVKI*
Ga0114968_1012121933300009155Freshwater LakeMMKQHKLVDALYRACLAHDAEKIGKLRKLEFDKIFKHRAQGKTFNAKWTVVSI*
Ga0114977_1016748923300009158Freshwater LakeMMKQRKLVDALYRACLDNGAEKISKLRKLEFSKIFKHRA
Ga0114978_1024418823300009159Freshwater LakeMMKQHKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAEGKTFNAKWTVVKI*
Ga0114978_1024460713300009159Freshwater LakeMMKQRKLVDALYRACLAHDAEKISKLRKLEFGKIFKHRAQGKPFNAKWTVVKI*
Ga0114978_1040366623300009159Freshwater LakeMMKQRKLVDALYRACLAHDAEKIGKLRKLEFGKIFKHRAQGKPFNAKWTVVKI*
Ga0114978_1081380013300009159Freshwater LakeMMKQRKLLDALYRACLDNDAKKINKLRKLEFGKIFKH
Ga0114966_1047167623300009161Freshwater LakeDALYRACLDNDAKKINKLRKLEFGKIFKHRAEGKPFNAKWTVVSI*
Ga0114970_1034242713300009163Freshwater LakeMMKQHKLVDALYRACLAHDAEKIGKLRRLEFGKIFKHRAQGKPFNAKWTVVKI*
Ga0114970_1038137213300009163Freshwater LakeFFKENNMMKQRKLVDALYRACLDNDAKKINKLRKLEFGKIFKHRAEGKPFNAKWTVVSI*
Ga0114975_1020936013300009164Freshwater LakeMMKQHKLVDALYRACLDNDAKKINKLRKLEFGKIFKHRAEGKPFNAKWTVVKI*
Ga0114979_1046483313300009180Freshwater LakeMMKQRKLVDALYRACLAHDAEKISKLRKLEFGKIFKHRAQGKPFNAKWTVVSI*
Ga0114974_1016445413300009183Freshwater LakeMMKQRKLVDALYRACLAHDAEKIGKLRRLEFSKIFKHRAQGKPFNAKWTVVKI*
Ga0114974_1058671813300009183Freshwater LakeHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI*
Ga0114971_1081531613300009185Freshwater LakeMMKQHKLVDALYRACLAHDAEKIGKLRKLEFGKIFKHRAQGKPFNAKWTVVKI*
Ga0114960_1017978523300010158Freshwater LakeMSQRKLVRKLYSACLAHDAEKISKLRKKEFAKIFKHRAQGKPFNARWTVVSI*
Ga0133913_1258735113300010885Freshwater LakeMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWT
Ga0133913_1280234123300010885Freshwater LakeMKQRKLVDALYSACLAHDAEKISKLRKLEFSKIFKHRAQGKPFNAKWTVVKI*
Ga0119955_117949023300012006FreshwaterMKQRKLVDALYRACLAHDAEKIGKLRKLEFGKIFNHRAQGKPFNAKWTVVKI*
Ga0153805_102496223300012013Surface IceMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI*
Ga0164293_1010883423300013004FreshwaterMMKQRKLVDALYRACLAHDAEKISKLRRLEFGKIFKHRAQGKPFNAKWTVVKI*
Ga0164293_1020491223300013004FreshwaterMMKQRKLVDALYRACLAHDAEKIGKLRKLEFGKIFKHRAQGKPFNAKWTVVSI*
Ga0164293_1078946613300013004FreshwaterHDAEKIGKLRKLEFGKIFKHRAQGKPFNAKWTVVKI*
Ga0164297_1000231493300013094FreshwaterMMKQRKLVTALYRACLAHDAEKIGELRKKEFAKIFKHRAQGKPFNAKWTVVKI*
Ga0177922_1054170013300013372FreshwaterRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI*
Ga0119954_103060713300014819FreshwaterMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVKI*
Ga0181362_106482413300017723Freshwater LakeQHKLVDALYRACLDHDAKKINKLRKLEFDKIFKHRAQGKPFNAKWTVVSI
Ga0181356_120088513300017761Freshwater LakeKQHKLVDALYRACLDHDAKKINKLRKLEFDKIFKHRAQGKPFNAKWTVVSI
Ga0181357_109668933300017777Freshwater LakeMMKQRKLVDALYRACLDHDAKKIGKLRKLEFGKIFKHRAQGI
Ga0181349_101635443300017778Freshwater LakeMMKQHKLVDALYRACLDHDAKKINKLRKLEFDKIFKHRAQGKPFN
Ga0181359_118173113300019784Freshwater LakeMMKQHKLVDALYRACLDHDAKKINKLRKLEFDKIFKHRAQGKPFNAKWTVVSI
Ga0211732_135208413300020141FreshwaterMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0211736_1079380313300020151FreshwaterMKQRKLVDALYRACLDHDAKKIGKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0211734_1008983723300020159FreshwaterMMKQRKLVDALYRACLDHDAKKINKLRKLEFDKIFKHRAQGKPFNAKWTVVSI
Ga0211734_1095041513300020159FreshwaterMMKQRKLVDALYRACLAHDAEKINKLRKLEFNKIFKHRVQGKPFNAKWTVVKI
Ga0211733_1052981313300020160FreshwaterMMKQRKLVDALYRACLAHDAEKIGKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0211735_1096655923300020162FreshwaterMKQRKLVDALYRACLAHDAEKIGKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0208090_104156913300020513FreshwaterMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0208486_104473423300020556FreshwaterMMKQRKLVDALYRACLAHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0208852_104769813300020560FreshwaterMMKQRKLVDALYRACLAHDAEKISKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0207934_106378323300020561FreshwaterMKQRKLVDALYRACLAHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0222712_1060527313300021963Estuarine WaterMMKQRKLVDALYRACLDHDAEKISKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0248169_13550443300022602FreshwaterMMKQRKLVHALYRACLEHDAEKINKLRKKEFAKIFRHRAEGKPFNAKWTVVKI
Ga0228702_108925013300022748FreshwaterSRRTIMKQRKLVTALYRACLEHDAEKIGKLRRLEFDKIFKHRAEGKPFNAKWTVVKI
Ga0214923_1006735223300023179FreshwaterMMKQHKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTLVKI
Ga0214923_1051081713300023179FreshwaterMMKQRKLVDALYRACLAHDAEKISKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0214923_1052875123300023179FreshwaterMKQRKLVDALYRACLAHDAEKINKLRRLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0214919_1030060313300023184FreshwaterHDAEKIGKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0214919_1032422123300023184FreshwaterMKQHKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTLVKI
Ga0214919_1081559913300023184FreshwaterRKLVDALYRACLDHDAEKISKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0244775_1031859123300024346EstuarineMKQHKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0208383_101043413300025357FreshwaterMKQRKLVNALYRACLEHDAEKIQELKMLEFRKIFKHRAEGKPFNAKWTVVKI
Ga0208250_101565143300025383FreshwaterRKLVHALYRACLEHDAEKIQELKMLEFRKIFKHRAQGKPFNAKWTVVKI
Ga0208250_102759023300025383FreshwaterMKQRKLVNALYRACLEHDAEKIQELKMLEFRKIFKHRAQGKPFNAKWTV
Ga0208378_101481643300025407FreshwaterMKQRKLVNALYRACLEHDAEKIQELKILEFRKIFKHRAQGKPFNAKWTVVKI
Ga0208253_105607523300025418FreshwaterMMKQRKLVHALYRACLEHDAEKINKLRKKEFAKIFRHRAEGKPFNAK
Ga0208974_104241623300027608Freshwater LenticMMKQHKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAK
Ga0208974_108317823300027608Freshwater LenticKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0208974_112049523300027608Freshwater LenticLYRACLDHDAKKINKLRKLEFDKIFKHRAQGKPFNAKWTVVSI
Ga0208974_113186633300027608Freshwater LenticMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAK
Ga0208133_116085113300027631EstuarineMMKQHKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0208975_114792913300027659Freshwater LenticMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNA
Ga0209442_110147423300027732Freshwater LakeMKQHKLVDALYRACLDHDAKKINKLRKLEFDKIFKHRAQGKPFNAKWTVVSI
Ga0209087_111299223300027734Freshwater LakeAHDAEKIGKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0209087_126108823300027734Freshwater LakeLSKENNMMKQRKLLDALYRACLDNDAKKINKLRKLEFGKIFKHRAEGKPFNAKWTVVKI
Ga0209190_135951113300027736Freshwater LakeHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0209596_103352613300027754Freshwater LakeMMKQHKLVDALYRACLAHDAEKIGKLRKLEFDKIFKHRAQGKTFNAKWTVVSI
Ga0209596_113001123300027754Freshwater LakeMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0209444_1006041033300027756Freshwater LakeRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0209444_1019069913300027756Freshwater LakeMMKQHKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPF
Ga0209296_114593623300027759Freshwater LakeMMKQHKLVDALYRACLDNDAKKINKLRKLEFGKIFKHRAEGKPFNAKWTVVKI
Ga0209086_1013543223300027770Freshwater LakeMMKQRKLVDALYRACLAHDAEKIGKLRRLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0209500_1003340023300027782Freshwater LakeMKQRKLVDALYRACLAHDAEKISKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0209500_1006646613300027782Freshwater LakeMMKQRKLVDALYRACLAHDAEKIGKLRRLEFSKIFKHRAQGKPFNAKWTVVKI
Ga0209107_1006876223300027797Freshwater And SedimentMMKQRKLVDALYRACLAHDAEKISKLRKLEFDKIFKHRAQGKPFNAKWTVVSI
Ga0304728_126509823300028393Freshwater LakeNTMSQRKLVRKLYSACLAHDAEKISKLRKKEFAKIFKHRAQGKPFNARWTVVSI
Ga0316221_100966923300032665FreshwaterMMKQRKLVTALYRACLAHDAEKIGELRKKEFAKIFKHRAQGKPFNAKWTVVKI
Ga0335003_0320421_209_3703300033995FreshwaterMMKQRKLVDALYRACLAHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0334985_0474387_574_7263300034018FreshwaterMMKQRKLVDALYRACLAHDAEKISKLRKLEFGKIFKHRAQGKPFNAKWTVV
Ga0335020_0340585_1_1233300034082FreshwaterACLAHDAEKISKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0335020_0381005_187_3483300034082FreshwaterMMKQRKLVDALYRACLAHDAEKIGKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0335012_0350345_1_1563300034093FreshwaterMMKQRKLVDALYRACLAHDAEKISKLRKLEFGKIFKHRAQGKPFNAKWTVVK
Ga0335029_0211049_1014_11753300034102FreshwaterMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAEGKPFNAKWTVVSI
Ga0335029_0534844_392_5533300034102FreshwaterMMKQRKLVDALYRACLAHDAEKIGKLRKLEFDKIFKHRAQGKPFNAKWTVVSI
Ga0335029_0629814_460_5943300034102FreshwaterALYSACLAHDAEKISKLRKLEFSKIFKHRAQGKPFNAKWTVVKI
Ga0335035_0468090_1_1173300034105FreshwaterMMKQRKLVDALYRACLAHDAEKIGKLRKLEFGKIFKHRA
Ga0335063_0588569_406_5253300034111FreshwaterMMKQRKLVDALYRACLDHDAKKINKLRKLEFGKIFKHRAQ
Ga0335056_0178948_2_1393300034120FreshwaterDALYRACLDHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0335052_0097034_1315_14763300034279FreshwaterMMKQRKLVDALYSACLAHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0335007_0256899_944_11053300034283FreshwaterMMKQRKLVDALYRACLDHDAEKINKLRKLEFGKIFKHRAQGKPFNAKWTVVSI
Ga0335013_0367366_600_7613300034284FreshwaterMMKQRKLVDALYRACLAHDAEKISKLRRLEFGKIFKHRAQGKPFNAKWTVVKI
Ga0335048_0168133_1094_12373300034356FreshwaterLVDALYRACLAHDAKKINKLRKLEFGKIFKHRAQGKPFNAKWTVVKF


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